gi|00000000|ref|CP012567.1| Klebsiella pneumoniae strain UCLAOXA232KP plasmid pUCLAOXA232-6, 196706, gc%: 52.41% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 113695..113706 attL N/A CCGGCAAAGGGA 114445..114456 attL N/A CGCAGCACCTCA complement(120394..121062) PROPHAGE_Brucel_1330: transposase, putative; AM277_29210; phage(gi23502708) 1.01e-48 KlebsiellapneumoniaeMILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM complement(121354..122358) PROPHAGE_Shewan_MR-1: IS110 family transposase; AM277_29215; phage(gi24375433) 1.70e-59 KlebsiellapneumoniaeMENIALIGIDLGKNSFHIHCQDRRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLEELGHSPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTILEDNSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRDLLCRKSNFVVTCALANKLARIAWALTARQQTYVA 122969..122980 attR N/A CGCAGCACCTCA 123693..124397 PROPHAGE_Brucel_1330: transposase, putative; AM277_29225; phage(gi23502708) 2.00e-52 KlebsiellapneumoniaeMNPFKGRHFQRDIIRWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM 124623..124634 attL N/A TGCGCTCCAGGT 125253..126080 PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AM277_29235; phage(gi371496158) 4.90e-27 KlebsiellapneumoniaeMMPHPIQDAVLRVDRLSVVYPGGVTALRDTSIAFRRGEFTVLLGLSGAGKSTLLRSLNRLVTPTGGSVTSELGELGSGSALRQHRRRTAMIFQHHQLIERQSALANVLTGRLAFHNTLRSLFPLPRADQEIALSCLARVGLADKALSRVDKLSGGQQQRVGIARALAQQPAIILADEPVASLDPATSVRVLGLLRDICKEDGITVIVSLHQLEYARRFADRVVGLADSQIVFDAAPSELTDAQLERIYAGRSTTQPANTPAEPPVMLEPSLEMSR 126077..126940 phosphate ABC transporter substrate-binding protein; AM277_29240 N/A KlebsiellapneumoniaeMKRLSALLLTCLLSAVSSLSALAADADPDVLKVALLPDENASELIKRNQPLKDYLEEHLDKKVQLIVTTDYSSMIEAMRFGRIDLAYFGPLSYVMAKSKSDIEPFAVTVIDGKPTYRSVIIANVASGVNEYADLKGKKMAYGDRASTSSHLIPKTVLLETAGLTGGRDYEEYFVGTHDAVAVNVANGNADAGGLSEVIFNHVVERGLIDPSKVKVLGYSGEYPQYPWAMRSNLSPELKTKVRDVFVGIDDPEVLRNFKAEAFAPITDADYDVIRKMGSLLGLDFATM 126949..127776 phosphate ABC transporter permease; AM277_29245 N/A KlebsiellapneumoniaeMSTHYDVQALPAEQREHILRGFGLGWWRQLGQVAIVFGVVLLACWYVGLLDATTLLNGLPSIATLAGEAMPPDFSGYRSWIRPLIDTLAMSIAGTAIAVVFSLVVAFVAARNTAPHPLVFGVARVLLNALRSVPELIMGIIFVAAVGFGALPGVLALGLHSVGMVSKFFAEAIEHVDEAPVEAARAAGATPMQVLLHAVLPQVTPQFADVAIYRWEYNFRASTVMGMVGAGGIGFELMGSLRIMQYQEVAAILLVILAMVTLVDAFSGVLRKRFK 127785..128795 2-hydroxyacid dehydrogenase; AM277_29250 N/A KlebsiellapneumoniaeMLPKLVITHRVHDEILQLLAPHCELVTNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVVGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGEFQGWQPQFYGTGLDNATVGILGMGAIGLAMAERLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTQHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPRLIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNIIQVLAGARPINAANRLPKAEPAAC 128789..129658 LysR family transcriptional regulator; AM277_29255 N/A KlebsiellapneumoniaeMLNPVWLKSLVAIVQTGSFQSAARALGLAQPTVSQHLQKLEEQVGVTLVQRSRSGCQPTTRALAFMPHATALLDMHARALEALHGNRERVGASTNIGTYLLQPFVRNYLTTANERGEVDLRIAANPDVADQLLAGQLDAAIMEWWLPHPDFEHRLWRVEPLVLIVSPDHALAEAGCIERDRLVDLPMLGGEPGSGTGRLLTEYFGELGVPRSGMQLGSTEAVKQAVRAGLGVSLVMASAVQDEVRSGALVALPIPGLEKRLQLIWRKPPGNLHPPGFVRHLLEEADLAG 129766..130401 PROPHAGE_Xantho_33913: IS1479 transposase; AM277_29260; phage(gi21229605) 6.68e-45 KlebsiellapneumoniaeMKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLNLERIPDETTILNFRRLLEKHELAAGILAVINGSGRPRPVAAPGHHRRCNADQCAQFDQEQGRQARPGNAPDQEGKPVLFRQCDLKVAWVSVPQVNARRNRLFHHSFPTQTGVAGNSRV complement(130867..131847) PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; AM277_29265; phage(gi971482498) 0.0 KlebsiellapneumoniaeMSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYIKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ complement(132106..132483) PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; AM277_29270; phage(gi557307573) 8.91e-81 KlebsiellapneumoniaeMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ complement(133049..133312) PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; AM277_29275; phage(gi157166064) 5.39e-06 KlebsiellapneumoniaeMRPQRRTYSKSFKAQVIQECSEPGASIANIALGYSLNANLDHKWIRLPTQKTTAIQPAFIPLPSQMLGVGSHTQARCCDHEFDPVGP 133327..133590 phospholipase; AM277_29280 N/A KlebsiellapneumoniaeMGHGLRRRCREGVLAGRILLNYVVWGNGSVSARLWNAIRSDDWAIPHVSLSSLGEIVVWARPDEFPPRNMQTSKGLRALGYNVRIGV 133834..134115 PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; AM277_29285; phage(gi22855124) 1.91e-06 KlebsiellapneumoniaeMKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA 134150..134719 PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; AM277_29290; phage(gi481019345) 7.81e-08 KlebsiellapneumoniaeMDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING 134834..137629 PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; AM277_29295; phage(gi15800640) 1.10e-161 KlebsiellapneumoniaeMARKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLVRQQKRTVSPLEALFGSRSGLFEDFLGSDFFRIGDDATPVAADTDDVVDASFGEPAAAGSGAPRRRGSGLASRISEQSEALLQEAAKHAAEFGRSEVDTEHLLLALADSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALRQQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFEERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVTVPEPTVAQAIMILRGLRDTFEAHHKVSISEDAIIAAAELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYVAARKQYDQAAELGKRIEAKEAELKKLVEDWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESIYGDEHALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEEYEKTKAGVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARSAASQGVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHASARWDDKAERVVFERKEPPQTPAEPEQPDAAKASDAS 137629..137826 phospholipase; AM277_29300 N/A KlebsiellapneumoniaeMAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA 138325..138813 diguanylate cyclase; AM277_29305 N/A KlebsiellapneumoniaeMKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS 138800..139762 Zn-dependent protease; AM277_29310 N/A KlebsiellapneumoniaeMISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR 140077..140382 transposase; AM277_29315 N/A KlebsiellapneumoniaeMRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA 140379..141104 PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; AM277_29320; phage(gi17546155) 2.74e-59 KlebsiellapneumoniaeMIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT 144666..144677 attR N/A TGCGCTCCAGGT 153095..153106 attR N/A CCGGCAAAGGGA