gi|00000000|ref|NZ_WSUP01000005.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL3828 144573, gc%: 52.55%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
107304..108305                     PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS48_RS00920; phage(gi100039)     9.21e-129           SalmonellaentericasubspentericaserovarTyphiMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVEREADELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS
complement(108302..109480)         PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS48_RS00925; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarTyphiMTAVSQKTTTPSADFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMLACGLAGAAWLLAALLPVSAPVKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFSALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSYGYPSVFLAGAISAVVGILVTILSFRRG
complement(109660..110034)         PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; GQS48_RS00930; phage(gi100005)     1.58e-05            SalmonellaentericasubspentericaserovarTyphiMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFLFLFDDTPPR
110206..110454                     PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; GQS48_RS00935; phage(gi985760910)     1.35e-23            SalmonellaentericasubspentericaserovarTyphiMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDADIAE
110623..110991                     PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; GQS48_RS00940; phage(gi311992945)     2.79e-08            SalmonellaentericasubspentericaserovarTyphiMSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGAEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
110991..111509                     YbjP/YqhG family protein; GQS48_RS00945                                              N/A                 SalmonellaentericasubspentericaserovarTyphiMKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFMNDVNTPDDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADKDYEQPIYDAGAITQAEAWSAKVAPEYEKH
complement(111576..112232)         CPBP family intramembrane metalloprotease; GQS48_RS00950                             N/A                 SalmonellaentericasubspentericaserovarTyphiMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNVFSGPEPWMAELSRQFFLHKFLNTLVMCFLAPVAEEIIFRGFLLNSSIGWGRYSRVSGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVIFGLLFSATE
complement(112330..113544)         PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; GQS48_RS00955; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarTyphiMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
113644..115704                     PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS48_RS00960; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarTyphiMRHQAHIVKIAIPPVRRVTYVKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKHKGFGRKREMLCGVMEQHLMPTLSAPWFYCSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHAWCGVTQLGWDEKSQQKIAQMLSLALPAGLASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFTSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDANWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAASAPVYPGLFMLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK

#### region 2 ####
128465..129406                     PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; GQS48_RS01030; phage(gi966197797)     0.0                 SalmonellaentericasubspentericaserovarTyphiMDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFFWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR
129482..129556                     tRNA                                                                                 N/A                 GTCCCCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAGTTGCAGGTTCGATTCCTGCAGGGGACACCA
complement(129704..130328)         PROPHAGE_Shewan_MR-1: ISSod4, transposase; GQS48_RS01040; phage(gi24373869)          4.22e-07            SalmonellaentericasubspentericaserovarTyphiMSHPFDFDKALKALQVRPGINGQRWHLNAINQVFNRLYPVCTFPSGSGCGKPKWFRQKAIKAPTGSFELATPRNRNGTFEPLVKKLQTPCTTRSSAISFDCLRWRVIRTSAGRVKIFMPSAFQPPPSVQYRSHPTKTVATEPAGEGLSRRLAGRYSLKPGWPLSEQGGLYRSGTESRRQKRSSGPISVGKRCLLVKT
130649..131038                     PHAGE_Entero_UAB_Phi20_NC_031019: recombination protein; GQS48_RS01045; phage(gi100049)     3.31e-75            SalmonellaentericasubspentericaserovarTyphiMLKLFAKYTSIGVLNTLIHWGVFAFCMYGMHTHQALTNFSDFVIAVSFSFYANARFTFNASTTAILYMMYMGFMGTLSAVVGWMADQCSLPPLVTLITFSAISLVCGFIYSRFIIFRDKNENLSCRPGF
131007..131261                     PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; GQS48_RS01050; phage(gi100002)     2.23e-33            SalmonellaentericasubspentericaserovarTyphiMKISLVVLVFNEEDTIPIFYRTVHEFNELEKYKVEIIFINDGSKDVTESIIKIIAVSDPLVIPFSFTRNFGNDARCTTILLIFF
131278..133200                     PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS48_RS01055; phage(gi100015)     0.0                 SalmonellaentericasubspentericaserovarTyphiMEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITMIDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNRLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
complement(133371..133817)         PROPHAGE_Escher_CFT073: transposase; GQS48_RS01060; phage(gi26246249)                2.76e-47            SalmonellaentericasubspentericaserovarTyphiMDEKKLTALAAELAKGLKTEADLSQFFHMLTKLTVETALNAELADHLGHEKNAPKTSSNSHNGYSLKTVLYDGGEIVLNMLRGRENTFELLIKEHQTRITRWKVRFIPLCQRHDMTTREIIATFKEMYDADVSPMLILKITAAVKELV
complement(134190..134333)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS48_RS01065; phage(gi100014)     3.51e-17            SalmonellaentericasubspentericaserovarTyphiMDGWGSYVSNILMQDCAGSGGLWYTYGKTFTYISVIDTKTLTLTNCL
complement(134349..134540)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS48_RS01070; phage(gi100014)     2.42e-28            SalmonellaentericasubspentericaserovarTyphiTSSRCYKLQFRKLLSIYSLWDCFNLWADIGNEKDRPGDYSLSEYPVHQLPTNHLVDGLVAIGS