gi|00000000|ref|NZ_CADILJ010000004.1| Achromobacter ruhlandii strain LMG 7053 isolate LMG 7053, whole 235999, gc%: 64.87% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 6692..6705 attL N/A GGCGGCCAGCCAGG 6809..7048 PHAGE_Entero_BP_4795_NC_004813: putative integrase; HV817_RS03885; phage(gi157165986) 4.36e-05 AchromobacterruhlandiiMSKGFDGVRPASESSIEIGFFYQGRHCVERIRVKPTAANLKRAAGRRAAILAAIARGDFDYDAEFPRRAAASLPAKDPT 7045..7593 ureidoglycolate lyase; HV817_RS03890 N/A AchromobacterruhlandiiMTRAAALPVHDLTADAFTSYGWMLGKPIPLGNGVPLFSNEATDFWQEHVFNTGAGGDAEVLWVNYRSAEGEIASLEKHLLTQQAIVPLTGAIIQVVARSAADGSPDLETLAAFRVEPGQGVCMRPGCWHATRVADAEVTCLMLTRRSTTLDLIQHLTTDAAASESAITPIPARQLEGLRLPD 7808..9277 DUF1254 domain-containing protein; HV817_RS03895 N/A AchromobacterruhlandiiMRIRRVGVGSSPRPFPGLALCLRGLAVLALIAGASGCSFTSPDAATGSQYVGIDGVAAPEAQRIAKEAYIYGYPMVATYQAIHAASIDAGNPHYQAPFNTLSHAMPDDAAALAPSVDAPVSSAVLDLRAEPVVISVPAMEARRYFSVQLRDLYGFNFAYLGSRVSGHGAGRYLVIGPRWNGAEPKGFTKVIRAETELVSMTVRTQRFAASDLAQFKRIQAGYQVQPLSAYLRKKPAPAPAPVAWIVSAPPAQMRSSLEFYNQLGFLLQFAPVQHGERTLRKRLDSLRIRPGAPVVTESMNPRLRQVMQEGMHDGQNDIDRHRVALAGKTDTLFGDRQSLRHDYLARATGAQVSLGGDSREESMATVLTTDAAGQPLDGAQAYTLRFAPRGLPPVNAFWSVTLYRMPGQQLAPNPIKRHVIDAAMLPTLKRDRDGGLTLRIQHQSPGKGGDANWLPAPAGPFMLTLRYYWPKPALLDGSWQPPQAQRVGL complement(9372..10070) PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; HV817_RS03900; phage(gi100116) 1.07e-18 AchromobacterruhlandiiMALGKQIRRYRAALGLTLEQLEARTGVGVGTIAALEGRDSERSKYAARLAAGLGLSLEQLLDEAAQYPPDVVLAEPGGDLARAADDAAGDLRIPRFDTGGAMGAGVELRDQPGVIQSLRVSQEWLHKNLRHYTAAANLCVVTGFGDSMRPMYNPGDPLLVDLGVVKADVDGVFFFRVGNEGFIKRLQRIPSAQGLLIRAKSENTKYDAWDITEDMDLQIFGRVLKVWRSEDL 10368..10937 hypothetical protein; HV817_RS03905 N/A AchromobacterruhlandiiMRAPQDWIAAASQAGAAIARSMAARPAPPQAGRQEGARGQQPKGQDMTREESDQVEALIMEWYHWSRGYRPQLGVGRVSAFARGMTSDEAYDDEDVDARLAATRGEQTELCIDELPWQQRSAIGVHAGNKAAGAHVFSNPRLTPAQQHAAYQEAKAALLPALRRRALVTTAQVRHADRAKPCDARGASA 11189..11656 PHAGE_Burkho_KS9_NC_013055: major tail subunit gp10; HV817_RS03910; phage(gi255033742) 4.51e-31 AchromobacterruhlandiiMAGTTVSQFVQTQGTQLEVSTTATEDLGAAGLTYADLAITIKDPNFQGGQTTEIDVTVLKSTAKEYALGLDDSGTFSMAGNWKAGDPAQKALVAARSDKKTRAFRVTFADGAKFEFLGLVTQYQWQGQLDNVVSATFNVRVTGAVKLTDAPANGG 11662..12135 PHAGE_Burkho_KS9_NC_013055: tail assembly chaperone gp11; HV817_RS03915; phage(gi255033743) 7.16e-27 AchromobacterruhlandiiMTDTSIHSPARVAGLRGLAVDPLAGFAHETLTVPQWQDARVIVRAPSAGDHLFHIRAIWAAAGVLPGEDNEVVRAKLDAPGVDYTRASASLLVRTLFEQTEQGPRRVFDDEDVDVVAAAYGPAHATLVAKAIELGNLGEGAQARAKKPSRKRQTSVS 12135..12425 PHAGE_Entero_mEp234_NC_019715: tail assembly chaperone; HV817_RS03920; phage(gi428782266) 1.08e-15 AchromobacterruhlandiiMVLALRLGRTLGELMDTIDTHEVSLWREWDRTSPLGDDRADVLTASLAATVAQAAGAKVRATDMLVRWGAQDEEPPAEAGADALKAFLMSKVRKGS 12483..13766 PHAGE_Entero_HK140_NC_019710: tail length tape measure protein; HV817_RS03925; phage(gi428781954) 4.60e-16 AchromobacterruhlandiiMADNNNAANIEAENRALRQNTVELNRNAAARRAWESAVARAATECRKSNDATNKGTDSKKKSTDALNKHAQAIRSEAVEQALAEMKKAGAMLGRSSETAKMEYETEAGRFAGESPSDKYSLTTAAWDLDRLRDQTKMRAYIENLADPDAESRRERTQKQWALDDALRDGTLTQDKYDKERRNLGLVEKDGDFMAKVNDKLIESARNGAGKIQDILGTKMYDFVSEKFDKMGLSFLDNVAKMVTSAASAKLMETLLGKEFMLGSGGVGGWISQAGGFIAGLFGSGGASTASAIVPSVAQAFPVQFAKGGAFTNGMTASPVAFPMGVMGEAGPEAIMPLHRGADGSLGIRAAFPNVGGDTNPVAGGVAVNVYVQDGKVSSSSESGEGGWQQFGQQIGEYVTQLVDRRMTQSYRQGGLAWQANNNRLAGA 13769..14107 PHAGE_Escher_HK75_NC_016160: minor tail protein; HV817_RS03930; phage(gi356870692) 1.21e-36 AchromobacterruhlandiiMAIETFTWSPRVNPQGRTKFRVLSAQFGDGYSQVAADGINNKVASWPLQFSGAAGQIEPIVAFLDRHQGYRGFQWQPPLGEPGYYTATDYDLTAMGGEMYSLAVTFQQVFRP 14292..15020 PHAGE_Burkho_KS9_NC_013055: minor tail protein gp16; HV817_RS03935; phage(gi255033747) 1.57e-80 AchromobacterruhlandiiMGIYSDVQKLEVGALVELFELDATEIGGQVLRFHGYTQVGPVWWQGRQYDPWAIRAEGFEQVGEGQQPSPTLSVGNIGQDGKGKPVVGVISALCIHLDDLVGARVVVRRTLGKYLDAANFPEGNPTADPQEELPPEVWIVQQKTVETAQVVEFSLSSALDFNGQKLPDRPIIAGVCSWLRKGGYRGPYCGYTGSRMFDLDGKPVSDPTLDRCSGLMSDCKKRFGEYEVINFGGFPSADLVRG 15023..15802 PHAGE_Burkho_KS9_NC_013055: tail component protein gp17; HV817_RS03940; phage(gi255033748) 4.63e-75 AchromobacterruhlandiiMLKRTMQAIRDHGVATYPQECCGLVVKAGRREWYVPCRNTAASEEHFVMSAEDYAAAEESGRIVAVVHSHPDAPAIPSEADRVACEASGLPWYIVAVEKDFDGRVSAGEIRGFTPEGFRAPLLGRQFAHGVLDCYSLVRDWYARERGITLRDFAREDGWWERGRAGDLYMEHYAEAGFRPLAPHETLAPGDVVVMQVRSDRANHAGVFLGAQPLREAPDLFPLPDAMLHHLYGRDSERVVYGGFWREATRLVLRYGEET 15799..16404 PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; HV817_RS03945; phage(gi255033749) 1.50e-70 AchromobacterruhlandiiMSDKVRLVRLYGWLGKRFGREHRLAVASPAEAVRALCALLPGFERALLDSERRGVRFACFAGRRNLSEDELRHPVGSDAIRIAPMLAGAKNGGLFQTVLGAVLIAAAAIYSGGLTAAFQAGGLLQATASMGLSMMLSGVAQMLSPQQRQLSARDRPENGASYNFNGPVNTTAQGNPVPLLYGEMFVGSATISAGIYSEDHV 16401..20024 PHAGE_Burkho_KS9_NC_013055: tail tip fiber protein gp19; HV817_RS03950; phage(gi255033750) 0.0 AchromobacterruhlandiiMKQRHRIRNQAPAGAFSFAGKGRPEEAALVGHKGKGGGGGRTPVESPDSLHSTAYARVIDLLGEGEIYGPVHGMDNALRDVYLNGTPVANADGSLNFTGASIDFRTGTQLQDPLPGFPASESTIGVSAELKSSQPWTRLFTNLQASAVRVTLAVEGLSRADTKNGDINGYRVEYVIELNTDGAGYQTVLSSAFDGKTTQRYARSHRIDLPRARQGWTLRVRRITPNANSNTISDRTVVDTVTEVIDAKLRYPMSALVGIKIDASQFQSIPTRAYHVRGRIIRVPSNYHPDLRSYDGVWDGTFKLAWTNNPAWVFYDLVSNDRYGLGTRVPAGWLDKWGLYQIGRYCDEMVDDGFGGKEPRFTCNVYLQQAADAYRVVQDFASVFRGMAYWANAAVFASADMPGDPVYTFSSANVVDGRFNYVGSALTTRYTVALVSWNDMAEMGRQKVEYVENREGIARYGIQQVEVTGFGCTSRGQAHRIGKWMLLTSNSETRSVTFSVGLDACRVRPGSVIRVADQHLAGRRIGGRIREGSVSKVTVDAELGVRPGDRLTVNLPNGLSETRVVATAVGTGLTVDNTAFTVDSTELTADLVGLPGTVLHITVTTPFSQAPEAECVWTLESEALSAQTFRVLSVKRKQGLVAEIAAVQHEPGKFDNVDFGTRLDPKPITVVPPSVQSAPVNIRLASRSVIDQGIARHVGVISWDAAPSAVAYQVQWRRDNSDWVEAGRTGALTLELPDIRAGAYVARVRAINVSDISSVWANSAETALEGDIAPPPALALLTTKSLVFGIELRWAFPEGRFTAQRTEIWYSASNDRASAIKLGDFAFPQNAHTLMGLAAGKRFYFWGRIVALNGEIGAWYPGDQGVMGESSWEASEILEYLNGKISRDELAQELTGTIDGLTSGLDETRAAITAEETKRADADGALSSRVDTVLAAANGAAAGVEETRNALVDVDGKLKATWSIKAQVAKDGKIYAAGMSAGAYSQPDGSMQTAVYFLADRLALLNQANGATTTPFVIENGQTFINDAVIGTSRITNAMIRSLDAGKIDAGYISVDRLDANALTAKLANLDKAYISRAHIREAQVDTLSIAGNAVTIPVSWAGTNSGSVVLVSNVEGPAVIIAYRGGYPSQPTALRIYANGEEIDRVDPAYTSTTPNEGGGLLYNTMPLSVMAVKTLPAGSSVITVNSAHSYASGAPLRLIVLMTKR 20029..20394 hypothetical protein; HV817_RS03955 N/A AchromobacterruhlandiiMKTASFYDAEGRIVGVMTGPLDCVVATGRHNQQFWVEGAGDPDVQCVMDGKLTPRPQSPATLSGLTLTELPVPCFIRIGDSGYPCTERVAELEFAQPGSYLVIVEAWPYLNKEFTVENPPL 20375..20590 hypothetical protein; HV817_RS03960 N/A AchromobacterruhlandiiMKIRHYEPYAPLRARAYPAIGDQLDAIMKFAAHLQASGQALPAEVTQWVAQCQGVKQRYPKPVIDAEGDAP 20587..21183 PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; HV817_RS03965; phage(gi255033749) 4.41e-66 AchromobacterruhlandiiMSQPLATVRLYGRLGAEFGRMHRLAVSSTAEAIRALCVLLPGFESRLLDSESKGVRYACFIGRRNLGEAELARPSGTEDIRIAPMPTGAKRGGLMQVVVGVAMIVASFIPVVNAALWASASTSLLTMGMAMTLGGVVQLLTPQQRALSVKDGPNNGASYNFNGPVNTTAQGNPVPVLYGEMFVGSATISAGIYSEDQV 21313..22242 LysR family transcriptional regulator; HV817_RS03970 N/A AchromobacterruhlandiiMKRNFNIHDLRIFYTVVMTGSTRQAAQAMHLTQPAVSHAISRLEQSTGVQLFDRSHKTLRPTEAGQYLYGEAKFVLDELVRIDEALHSIEQFGGRGLRIACSPALALSYAPDAVRRYLKANGTRPFSLDLESSVQAISAVDTMRADFGLGAVSQQSARLAFRPFLRTEVMAIAHREHCLARGDIVRVGDIRPDSYVQPLWSDYVMPQGDIAESMQLRSGMRAHMSLLAGTVCAVRGVSMVNALSAADIAAAYPELVALPLASRQWFDFVLIARNEAASQEPAERLVEALHAAARERQRGVYEQAIQLLA 22137..22150 attR N/A GGCGGCCAGCCAGG complement(22298..23116) PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; HV817_RS03975; phage(gi971760361) 4.88e-06 AchromobacterruhlandiiMTVKNPVPADIGALPVDLSGKRVIVTAGAAGIGAAIAGAFAARGARVHVCDVDEQALAACPHPHSRADVSRRDEIDRYMGEALSHLGGLDVLVNNAGIAGPTAGIGDIAPQDLEATLDINLAAQFHTVRHALLALREAGGGSIINISSVAGRMGVPMRTPYAATKWGVVGLTRSLAVELGGYGIRVNALLPGLVAGPRIDRVIAARARNMGVTVAEETRLELAGVSLGQFVRAADIANMALFLASPFGAMVSGQAISIDGDLQSLPWQPPAD