gi|00000000|ref|NZ_CP012513.1| Salmonella enterica subsp. enterica serovar Thompson strain RM1984 4708710, gc%: 52.25% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### complement(1058867..1060069) PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; STho1984_RS04940; phage(gi100242) 4.88e-49 SalmonellaentericasubspentericaserovarThompsonMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPDQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS 1060215..1060229 attL N/A TTATAAAAATGTAGC complement(1060264..1061556) PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STho1984_RS04945; phage(gi169257268) 0.0 SalmonellaentericasubspentericaserovarThompsonMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ complement(1061601..1061849) PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STho1984_RS04950; phage(gi169257269) 2.25e-55 SalmonellaentericasubspentericaserovarThompsonMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT complement(1061890..1062129) PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS04955; phage(gi169257264) 1.91e-52 SalmonellaentericasubspentericaserovarThompsonMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN complement(1062172..1063329) PHAGE_Phage_Gifsy_1_NC_010392: RecT; STho1984_RS04960; phage(gi169257263) 0.0 SalmonellaentericasubspentericaserovarThompsonMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAAMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG complement(1063292..1066219) PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; STho1984_RS04965; phage(gi169257262) 0.0 SalmonellaentericasubspentericaserovarThompsonMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSFTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDVHKVVNAIKKVFPVDGKTPELATVIQFLKTWFETEHIDRSLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPGLVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA complement(1066346..1066696) PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS04970; phage(gi169257261) 1.01e-81 SalmonellaentericasubspentericaserovarThompsonMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH complement(1066718..1066888) PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS24690; phage(gi169257260) 7.35e-14 SalmonellaentericasubspentericaserovarThompsonMHNQKTCAYHLCGKTIEQGKEVKNELTLIRGAQLTHEERDYCSVRCASYDQMAHES 1067285..1067491 PHAGE_Entero_HK225_NC_019717: hypothetical protein; STho1984_RS04980; phage(gi428782417) 1.60e-24 SalmonellaentericasubspentericaserovarThompsonMDRDELEEDRAAFIAGEIGGAVVELIIDGVVINRDAIVERLEEKRRAVGNVIHKGVLRDAAAMVRKGQ complement(1067518..1068459) PHAGE_Lister_vB_LmoS_188_NC_028871: hypothetical protein; STho1984_RS04985; phage(gi971750825) 3.53e-30 SalmonellaentericasubspentericaserovarThompsonMDAGSDSETNDMKFRIVYDGPALETHEMNVRDLAPALLSLSDALEEAGKTVYGNKTVVSVKVNASFKAGSFGIDLIASSTSWIKQAVDFFSGDTATAAANLIALIGFCPGPREKICKGLIQLVKWIGPREIKKLHNLPDSNVEVFVDDDSEIFDSKVIELYRNIKLRSSLQEVISKPLEQEGIDSFASTVDDGLTFMTIDKQEAHYFKVELPAESIISESTVEKALQIKNISFNEGSRWRFSDGSSSFLAEIKDQKFISDIDNNTLNFSKGDMLLVDLKVTQYMIGDAIKTTFEIEHVKKQLNPQRQIDLPFE complement(1068565..1068960) PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STho1984_RS04990; phage(gi435439303) 7.20e-66 SalmonellaentericasubspentericaserovarThompsonMRKNTHQTDNPQVRRLNEIIEKKRISKADIARICGVSAQSVNNWFVRGAIGKSSAIKLADALGVSLEWVLGQDVDAKDGLRHDERRLLELYNQLPNEEEQQNMLRIVSLRLKELDELYAKYMGRRIKGDAE 1069065..1069301 PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; STho1984_RS04995; phage(gi169257257) 8.89e-15 SalmonellaentericasubspentericaserovarThompsonMNALEKAIQVAGNSSKLAEKLGVSSMTISHWKKRYGGVVPKGRVFPIFHVTGITPHELRPDMYPNPTDGLPSQEASAK 1069267..1069641 PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; STho1984_RS05000; phage(gi169257256) 1.22e-86 SalmonellaentericasubspentericaserovarThompsonMDYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD 1069726..1070709 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; STho1984_RS05005; phage(gi169257255) 0.0 SalmonellaentericasubspentericaserovarThompsonMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG 1070712..1071461 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; STho1984_RS05010; phage(gi169257254) 1.05e-178 SalmonellaentericasubspentericaserovarThompsonMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRTWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRGCTFANYEVNGDGQRKAFTMAKSYAQNFGAGFASFVFSGGPGTGKNHLAAAIGNHLLASGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGALTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK 1071472..1071819 PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05015; phage(gi169257253) 7.09e-72 SalmonellaentericasubspentericaserovarThompsonMARPKTHSERMIILERIIGLVKEQGRITTNDVVAMFGVHRTTAEKYLQIALVRGGFIRHGRCGVFRDQRAVIDYDLKRYSCNKTTGFSALPALEKSQVMQVYGASKMSINKGGAQ 1071816..1072136 PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STho1984_RS05020; phage(gi423262430) 2.37e-36 SalmonellaentericasubspentericaserovarThompsonMSNIDKQALLGADKHANQHRLSRLIIEANSAELRAIAEAVEQYTDQLIAALADSEKRIAELESKLSKPVLLPKTNGYWTEQEKAYEEAITLAKRQVRLAGFSVEDM 1072136..1072381 PHAGE_Entero_ES18_NC_006949: gp40; STho1984_RS05025; phage(gi62362253) 4.85e-44 SalmonellaentericasubspentericaserovarThompsonMAIFMEVRCEGLGDIDGCFSSQNAGSITSARESVKSVSIALKFLKDDSLNNGWVLHKGELYCPVCAKAKALAAAGIKWKAE 1072692..1073909 PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; STho1984_RS05030; phage(gi410491517) 4.11e-156 SalmonellaentericasubspentericaserovarThompsonMTDTAYSKSLEKEVDPEQYLVLTGHTIDTIHTFAREDIVCPICEATGGTFVRGGTNARFNRRAHFRFRNTKDKSNHHPSCDFYDERISPDVKNHLVYFSTDRTKITHVIRKMVCAGIQEGFFDQESMRQMRKWFFQKRVDSTFKLSLTEEQVSWLHYITDNTSVNWGYVNGVAPFSPVQATIPGFSWEDAIQREFTLVHLPTLRKLQDLKVWRKQLSMLTKFVSSPSQGVLIDPTLLKDEYEKTLQLNAFIISSYDEFKNKSVRDRADGEVKLLAFSALLLFVSGWDINQAIEKFAVIANVDEVYDDLAGNFIGLNPYLKFELADTARKLQENWPIEYKEINYWQVEKRMRAMYEEDQKSRSTPLPPLPADIYITEHLKRKEEEERVRRWLEADRIEFDNDITEE 1073890..1073958 DUF551 domain-containing protein; STho1984_RS24420 N/A SalmonellaentericasubspentericaserovarThompsonMILPRSEITHWMQLPEPPQEVE 1074052..1074378 hypothetical protein; STho1984_RS05035 N/A SalmonellaentericasubspentericaserovarThompsonMKPKKLNAKQQYQLDLELVKKKPANRTEAKAHLAAQLRISKYKLQTSSKIRVGSFRGRKKVHFSKAEEDARAALNKANAIRFSEGEVESVDTDRISKSNKRWRGRTAD 1074626..1074859 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; STho1984_RS05040; phage(gi169257250) 2.75e-50 SalmonellaentericasubspentericaserovarThompsonMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY 1074976..1075224 PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STho1984_RS22945; phage(gi435439314) 3.96e-52 SalmonellaentericasubspentericaserovarThompsonMSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA 1075259..1075861 PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STho1984_RS05045; phage(gi169257248) 1.42e-144 SalmonellaentericasubspentericaserovarThompsonMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRIFRTQREAENAAAQLMSFAG 1076070..1076681 PHAGE_Phage_Gifsy_1_NC_010392: NinG; STho1984_RS05055; phage(gi169257246) 1.04e-146 SalmonellaentericasubspentericaserovarThompsonMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA 1076678..1076824 PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STho1984_RS05060; phage(gi169257245) 4.31e-12 SalmonellaentericasubspentericaserovarThompsonMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES 1076814..1077611 PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; STho1984_RS05065; phage(gi966201477) 0.0 SalmonellaentericasubspentericaserovarThompsonMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR 1078010..1078135 PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STho1984_RS05070; phage(gi169257292) 1.23e-22 SalmonellaentericasubspentericaserovarThompsonMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA complement(1078271..1078720) PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STho1984_RS05075; phage(gi169257293) 3.59e-107 SalmonellaentericasubspentericaserovarThompsonMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF complement(1079081..1079767) PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STho1984_RS05080; phage(gi169257241) 3.36e-160 SalmonellaentericasubspentericaserovarThompsonMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVERWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN 1080043..1080372 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; STho1984_RS05085; phage(gi169257240) 1.57e-73 SalmonellaentericasubspentericaserovarThompsonMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ 1080356..1080808 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STho1984_RS05090; phage(gi169257239) 1.80e-103 SalmonellaentericasubspentericaserovarThompsonMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS 1080826..1081275 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STho1984_RS05095; phage(gi169257238) 1.72e-89 SalmonellaentericasubspentericaserovarThompsonMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCSVPTRTETASTSRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYIRTQCLK 1081604..1082107 hypothetical protein; STho1984_RS05100 N/A SalmonellaentericasubspentericaserovarThompsonMRRILATAAALCLGGCITVYGPVKTGGQQQQDSQSGQQPGMSEQISTSFIGNRKPDELLNAVALYFREKAITASVNDQTTGIIAGTGDDPELSSLYLDCSLLPQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVKPVECKSTGIFEKDLQERLRK complement(1082364..1082765) PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05105; phage(gi169257237) 1.65e-91 SalmonellaentericasubspentericaserovarThompsonMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGIGDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK 1083051..1083596 PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STho1984_RS05110; phage(gi169257236) 2.91e-115 SalmonellaentericasubspentericaserovarThompsonMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE 1083568..1085499 PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STho1984_RS05115; phage(gi169257235) 0.0 SalmonellaentericasubspentericaserovarThompsonMISGERRANNANRAITNGLIALHIPVPLTTVQWADKYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH 1085483..1085686 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STho1984_RS05120; phage(gi169257234) 6.44e-42 SalmonellaentericasubspentericaserovarThompsonMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL 1085683..1087263 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STho1984_RS05125; phage(gi169257233) 0.0 SalmonellaentericasubspentericaserovarThompsonMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT 1087253..1088749 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STho1984_RS05130; phage(gi169257232) 0.0 SalmonellaentericasubspentericaserovarThompsonMQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPTDTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT 1088762..1089109 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STho1984_RS05135; phage(gi169257231) 3.50e-78 SalmonellaentericasubspentericaserovarThompsonMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP 1089164..1090192 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STho1984_RS05140; phage(gi169257230) 0.0 SalmonellaentericasubspentericaserovarThompsonMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG 1090250..1090615 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STho1984_RS05145; phage(gi169257229) 8.46e-78 SalmonellaentericasubspentericaserovarThompsonMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL 1090626..1091003 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STho1984_RS05150; phage(gi169257228) 6.32e-82 SalmonellaentericasubspentericaserovarThompsonMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFERA 1090990..1091568 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STho1984_RS05155; phage(gi169257227) 1.45e-135 SalmonellaentericasubspentericaserovarThompsonMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR 1091565..1091966 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STho1984_RS05160; phage(gi169257225) 4.01e-93 SalmonellaentericasubspentericaserovarThompsonMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN 1091974..1092720 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STho1984_RS05165; phage(gi169257224) 2.48e-173 SalmonellaentericasubspentericaserovarThompsonMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGEAGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS 1092771..1093166 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STho1984_RS05170; phage(gi169257223) 3.47e-93 SalmonellaentericasubspentericaserovarThompsonMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS 1093163..1093501 PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STho1984_RS05175; phage(gi169257222) 2.45e-77 SalmonellaentericasubspentericaserovarThompsonMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH 1093473..1096568 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STho1984_RS05180; phage(gi169257221) 0.0 SalmonellaentericasubspentericaserovarThompsonMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR 1096571..1096900 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STho1984_RS05185; phage(gi169257220) 5.05e-76 SalmonellaentericasubspentericaserovarThompsonMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI 1096910..1097608 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STho1984_RS05190; phage(gi169257219) 1.49e-170 SalmonellaentericasubspentericaserovarThompsonMQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ 1097615..1098352 PHAGE_Entero_mEp460_NC_019716: tail fiber component; STho1984_RS05195; phage(gi428782332) 2.57e-154 SalmonellaentericasubspentericaserovarThompsonMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR 1098250..1098897 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STho1984_RS05200; phage(gi169257217) 1.65e-153 SalmonellaentericasubspentericaserovarThompsonMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR 1098959..1102321 PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STho1984_RS05205; phage(gi169257216) 0.0 SalmonellaentericasubspentericaserovarThompsonMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN 1102360..1102602 PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05210; phage(gi169257215) 9.09e-52 SalmonellaentericasubspentericaserovarThompsonMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC 1102656..1105151 PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STho1984_RS05215; phage(gi169257320) 0.0 SalmonellaentericasubspentericaserovarThompsonMPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA 1105151..1105732 PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STho1984_RS05220; phage(gi169257321) 5.64e-134 SalmonellaentericasubspentericaserovarThompsonMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ complement(1106562..1108052) PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STho1984_RS05225; phage(gi169257209) 0.0 SalmonellaentericasubspentericaserovarThompsonMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV 1108442..1108591 PHAGE_Escher_500465_1_NC_049342: hypothetical protein; STho1984_RS22955; phage(gi100035) 3.16e-13 SalmonellaentericasubspentericaserovarThompsonSQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK 1110408..1110422 attR N/A TTATAAAAATGTAGC #### region 2 #### 1922812..1923234 PHAGE_Entero_HK022_NC_002166: integrase; STho1984_RS09320; phage(gi9634144) 3.37e-29 SalmonellaentericasubspentericaserovarThompsonQFSHIIDERLYVKQIKTGMKIALPLSLNLPSMDLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKIYLDGRDEKAYMML 1923291..1923307 attL N/A GAATACAGAAATTCGGA 1924318..1925232 DMT family transporter; STho1984_RS09330 N/A SalmonellaentericasubspentericaserovarThompsonMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK 1925365..1925523 hypothetical protein; STho1984_RS09335 N/A SalmonellaentericasubspentericaserovarThompsonMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF 1925533..1926147 disulfide bond formation protein B; STho1984_RS09340 N/A SalmonellaentericasubspentericaserovarThompsonMKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL complement(1926474..1926620) PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STho1984_RS24145; phage(gi100036) 5.64e-17 SalmonellaentericasubspentericaserovarThompsonIGGRRPKLTPEQWAQAGYLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG 1926635..1926781 hypothetical protein; STho1984_RS24695 N/A SalmonellaentericasubspentericaserovarThompsonMAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG complement(1927295..1927420) hypothetical protein; STho1984_RS09345 N/A SalmonellaentericasubspentericaserovarThompsonMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK complement(1927387..1927617) hypothetical protein; STho1984_RS24470 N/A SalmonellaentericasubspentericaserovarThompsonMFRTEIAADPDRRLDAIVFTLYLRPQVHFLSKPGRTVALFCLAEGLSYDIVAVLPELLVGINDCAPCLPMPIPNSF 1927988..1928188 PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STho1984_RS09350; phage(gi169257211) 6.49e-41 SalmonellaentericasubspentericaserovarThompsonMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPADIPFPEDWFKMCRGY complement(1928285..1929166) PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STho1984_RS09355; phage(gi169257205) 7.31e-89 SalmonellaentericasubspentericaserovarThompsonMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDGVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL complement(1929324..1929584) PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STho1984_RS09360; phage(gi169257184) 7.50e-56 SalmonellaentericasubspentericaserovarThompsonMDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR 1929892..1930059 lytic enzyme; STho1984_RS09370 N/A SalmonellaentericasubspentericaserovarThompsonMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK complement(1930316..1930849) PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STho1984_RS09375; phage(gi16765210) 1.59e-123 SalmonellaentericasubspentericaserovarThompsonMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH complement(1930903..1931094) PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STho1984_RS09380; phage(gi169257182) 2.52e-37 SalmonellaentericasubspentericaserovarThompsonIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFLTKGCLKYSGDLVRVTQIINGG 1931083..1932234 PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; STho1984_RS24150; phage(gi327198600) 4.80e-50 SalmonellaentericasubspentericaserovarThompsonGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNPPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEEKQPAAEPEVVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDDIQPGIYYDIPNEAYHAGQGVSKSQLDDIVDTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGITVLTAEEGRKIEFMYQSVMA 1932267..1933346 PHAGE_Entero_HK022_NC_002166: integrase; STho1984_RS09390; phage(gi9634144) 8.75e-93 SalmonellaentericasubspentericaserovarThompsonMSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKKTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRTAAEHLPVWFPLAMDLALVTGQRREDIVNMKFSDVVDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML 1933413..1933429 attR N/A GAATACAGAAATTCGGA complement(1933729..1934082) PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STho1984_RS09400; phage(gi971764937) 1.42e-11 SalmonellaentericasubspentericaserovarThompsonMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPYNS complement(1934099..1934974) copper homeostasis membrane protein CopD; STho1984_RS09405 N/A SalmonellaentericasubspentericaserovarThompsonMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMCMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF complement(1934975..1935349) CopC domain-containing protein YobA; STho1984_RS09410 N/A SalmonellaentericasubspentericaserovarThompsonMASSARSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK 1935487..1935717 PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STho1984_RS09415; phage(gi422936677) 1.18e-22 SalmonellaentericasubspentericaserovarThompsonMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK 1935825..1936481 carbon-nitrogen hydrolase family protein; STho1984_RS09420 N/A SalmonellaentericasubspentericaserovarThompsonMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR 1936505..1937203 PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; STho1984_RS09425; phage(gi100273) 5.11e-18 SalmonellaentericasubspentericaserovarThompsonMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ #### region 3 #### 2444209..2445210 PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11910; phage(gi100039) 1.03e-128 SalmonellaentericasubspentericaserovarThompsonMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVERETDELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS complement(2445207..2446385) PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11915; phage(gi100040) 0.0 SalmonellaentericasubspentericaserovarThompsonMTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPIKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG complement(2446565..2446939) PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; STho1984_RS11920; phage(gi100005) 1.60e-05 SalmonellaentericasubspentericaserovarThompsonMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFLFDDTPPR 2447112..2447360 PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; STho1984_RS11925; phage(gi985760910) 9.13e-25 SalmonellaentericasubspentericaserovarThompsonMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYDDMQIKNDADIAE 2447529..2447897 PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; STho1984_RS11930; phage(gi311992945) 2.87e-08 SalmonellaentericasubspentericaserovarThompsonMSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGTEWYSDFKQRDMWAGPGYRAARPSYTIYRKN 2447897..2448415 YbjP/YqhG family protein; STho1984_RS11935 N/A SalmonellaentericasubspentericaserovarThompsonMNTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNPPDDTTALMQRYVAKEVILRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLGTESTPIHLEVYTRWEEGRWKIYRVRDADRGYEQPIYDAGAITQAEAWSAKVAPEYKKH complement(2448482..2449138) CPBP family intramembrane metalloprotease; STho1984_RS11940 N/A SalmonellaentericasubspentericaserovarThompsonMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNAFSGPEPWMAELSRQFFLHKFLNTLAMCFLAPVAEEIIFRGFLLNSSIGWGRYSRASGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVVFGLLFSATE complement(2449236..2450450) PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; STho1984_RS11945; phage(gi100041) 0.0 SalmonellaentericasubspentericaserovarThompsonMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDELAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL 2450610..2452610 PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11950; phage(gi100042) 0.0 SalmonellaentericasubspentericaserovarThompsonMKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQHLMPTLSAPWFYRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHDWCGVTQLGWDEKSQQKIAQMLSLALPAELASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFMSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDAKWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAAPAPVYPGLFVLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK #### region 4 #### 2726710..2726721 attL N/A TGTTAATGCGTT complement(2730932..2732293) PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; STho1984_RS13180; phage(gi100057) 0.0 SalmonellaentericasubspentericaserovarThompsonMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR 2732459..2733250 PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1984_RS13185; phage(gi100056) 4.09e-172 SalmonellaentericasubspentericaserovarThompsonMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS 2733270..2734556 PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1984_RS13190; phage(gi100055) 0.0 SalmonellaentericasubspentericaserovarThompsonMEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE 2734677..2735282 hypothetical protein; STho1984_RS13195 N/A SalmonellaentericasubspentericaserovarThompsonMSEDYVIEWDKNFADDLNVVANVFLSHNPTLWPTIFSQLSTQPEIFEDEDEDEYGLQDVLDCSGGDLGNNELAQAFLQVLRGEGFIHLVDWKGEDEEGELANFAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRGFQIFDLNEGSDTYNVVVLPMSEYKKIEDFNTPWLEVQDFLS complement(2735317..2735907) PHAGE_Escher_500465_1_NC_049342: tail assembly protein; STho1984_RS13200; phage(gi100053) 1.76e-53 SalmonellaentericasubspentericaserovarThompsonMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK 2736031..2736909 PHAGE_Escher_500465_1_NC_049342: hypothetical protein; STho1984_RS13205; phage(gi100051) 0.0 SalmonellaentericasubspentericaserovarThompsonMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCAQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQERQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF 2736995..2738656 PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; STho1984_RS13210; phage(gi100050) 0.0 SalmonellaentericasubspentericaserovarThompsonMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA 2738805..2739143 PHAGE_Escher_500465_1_NC_049342: recombination protein; STho1984_RS13215; phage(gi100049) 1.88e-73 SalmonellaentericasubspentericaserovarThompsonMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK complement(2739309..2739599) PHAGE_Escher_500465_1_NC_049342: exonuclease; STho1984_RS13220; phage(gi100048) 7.89e-55 SalmonellaentericasubspentericaserovarThompsonMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR complement(2739589..2740026) PHAGE_Escher_500465_1_NC_049342: primase; STho1984_RS13225; phage(gi100047) 3.01e-97 SalmonellaentericasubspentericaserovarThompsonMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG 2740215..2740697 PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; STho1984_RS13230; phage(gi100046) 1.78e-110 SalmonellaentericasubspentericaserovarThompsonMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR 2741312..2752786 PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; STho1984_RS13235; phage(gi100051) 6.19e-10 SalmonellaentericasubspentericaserovarThompsonMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGVSHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGEAEAGSIITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDSTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWRFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLSPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVPTFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEIFDNGVSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASPAESFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTTSPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESLSFTLRVDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGAIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSSVFSVTLDTQPPAQPDAPLISDNVTPVIGNIGNNGATNDATPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLAVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGTWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFINGDSAGFATVDASGNWIFEITTPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNSASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTAIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGWVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGNTLLGVTSANAGGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTSALGQGSHAYSVSAADAAGNVSAASPSTTIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGQAEANSTVTVTLAGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQSYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVEKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVAPTGALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG 2752851..2754260 TolC family outer membrane protein; STho1984_RS13240 N/A SalmonellaentericasubspentericaserovarThompsonMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDGIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLIEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP 2754257..2756437 PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; STho1984_RS13245; phage(gi9630145) 1.13e-24 SalmonellaentericasubspentericaserovarThompsonMTRAAPDVEEVLSERALSQWAQAISHVAGHYRVACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRGGQLLVIEHVNGEDAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA 2756445..2757608 HlyD family type I secretion periplasmic adaptor subunit; STho1984_RS13250 N/A SalmonellaentericasubspentericaserovarThompsonMDDPDIQRERAFSGAGRIVLICSLLFLIFGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER 2757680..2758042 tRNA N/A GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA 2758238..2759434 PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STho1984_RS13255; phage(gi16130540) 1.59e-173 SalmonellaentericasubspentericaserovarThompsonMARTTRSLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGIRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRPLEKDVFPAIGEIPVQQIKARTLIEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSVSTCCFIEWQLLTLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVLLSPQALEILDVMKPISAHREHVFPSRNDPKQAMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGFSPDIIEAALAHSDKNEVRRAYNRSTYLEQRKDLMSWWGLFVNKTIK 2768669..2768680 attR N/A TGTTAATGCGTT #### region 5 #### complement(4270730..4271458) PHAGE_Escher_RCS47_NC_042128: nicotinamide mononucleotide transporter; STho1984_RS20495; phage(gi100101) 1.43e-38 SalmonellaentericasubspentericaserovarThompsonMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTVKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR complement(4271655..4271944) hypothetical protein; STho1984_RS20500 N/A SalmonellaentericasubspentericaserovarThompsonMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFYFGGVWQMRCISMVQKNRKKLDYRLIASIPNLELISWEQKGEIRSLPSQLLFYISPWKYAA complement(4272197..4272652) PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STho1984_RS20510; phage(gi418489075) 4.70e-27 SalmonellaentericasubspentericaserovarThompsonMSQTTVWLACYKGRSEYRGIARFVDWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEAFFRKHNGKRYDWQGALGIALYNRERKDKLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC complement(4272649..4273254) DUF4376 domain-containing protein; STho1984_RS20515 N/A SalmonellaentericasubspentericaserovarThompsonMTKYVYYHPSTFEVIDWIDDTSLNVVLPESIKPVNDEQWKLRGKPCWICLAPFSFITTPPPGEFYQLVGDKWIYNPTAFNDALVNKKENVVLSIKAHRDTVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAKQIPAGLMWQTKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALGDIEAVLDYDYSSGWQP complement(4273259..4275028) PHAGE_Escher_520873_NC_049344: holin; STho1984_RS20520; phage(gi100034) 6.64e-88 SalmonellaentericasubspentericaserovarThompsonMYNEFYTLLTDWGMAKIASALADKKQIHLQKMAVGDGGGQYYEPTASQTNLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVQLSSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKASAAAPASHTHAWGQITGTPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAMDKANAALNLANTAASNGPRYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGCSPAPDKTNTFSAGRGGDHGELKIAIIGVTSKKTYTVSVGAGGSGGGGGFVPSYEDRTSIGPNGQGHTLFKGDAGEPGLDGGDSSFINISAKGGLGSSGKIAEFTSTESYPGGVGVGSAFGTGGSAAAFANGGNADGYGAGGGGGASLNQNTRSAISGYSGGRGSDGFVKISW complement(4275031..4275663) PHAGE_Burkho_BcepMu_NC_005882: gp51; STho1984_RS20525; phage(gi48696961) 3.03e-31 SalmonellaentericasubspentericaserovarThompsonMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAGQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE complement(4275656..4276771) PHAGE_Burkho_BcepMu_NC_005882: gp50; STho1984_RS20530; phage(gi48696960) 1.46e-131 SalmonellaentericasubspentericaserovarThompsonMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVATGESGNNWQPAQISALVDRVGNYDLSVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVPYQIRARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG complement(4276762..4277121) PHAGE_Burkho_BcepMu_NC_005882: gp49; STho1984_RS20535; phage(gi48696959) 5.02e-43 SalmonellaentericasubspentericaserovarThompsonMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR complement(4277285..4278832) PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STho1984_RS20540; phage(gi221328637) 1.05e-61 SalmonellaentericasubspentericaserovarThompsonMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF complement(4278832..4279761) PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STho1984_RS20545; phage(gi19549012) 0.0 SalmonellaentericasubspentericaserovarThompsonMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYDVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME complement(4279758..4280120) PHAGE_Entero_SfV_NC_003444: putative flippase; STho1984_RS20550; phage(gi19549013) 7.17e-60 SalmonellaentericasubspentericaserovarThompsonMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVTGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK complement(4280448..4281170) PHAGE_Burkho_BcepMu_NC_005882: gp48; STho1984_RS20555; phage(gi48696958) 3.31e-39 SalmonellaentericasubspentericaserovarThompsonMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKERTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEASHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGIGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH complement(4281180..4282223) PHAGE_Burkho_BcepMu_NC_005882: tail protein; STho1984_RS20560; phage(gi48696957) 6.90e-102 SalmonellaentericasubspentericaserovarThompsonMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSAGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYIIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDISHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKAPARGSATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSMMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ complement(4282211..4282420) PHAGE_Burkho_BcepMu_NC_005882: gp46; STho1984_RS20565; phage(gi48696956) 2.44e-22 SalmonellaentericasubspentericaserovarThompsonMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPKLPPWLR complement(4282420..4283373) PHAGE_Burkho_BcepMu_NC_005882: gp45; STho1984_RS20570; phage(gi48696955) 3.24e-50 SalmonellaentericasubspentericaserovarThompsonMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVSDSWFDELMSAVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTISAIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL complement(4283373..4285727) PHAGE_Burkho_BcepMu_NC_005882: gp44; STho1984_RS20575; phage(gi48696954) 4.19e-58 SalmonellaentericasubspentericaserovarThompsonMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKITRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSAAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQVAMKNAPDAGAAAANFDHFLKSTFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMAHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMTEKFNLGAMFGDAQTRDFLAPMLANMVEYRQLKASAMQAAGQHFIDDDFAVKMTSPGEQTKALQLSLNDLWLTVGMELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVGVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKGLTVLLGNGLIKGLRLVGQAFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFASVLDWFGIELPASFSEFGGNILDSLINGILNALPFLNGAIEKIKALIPDWAKSALGISTEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPMKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA complement(4285824..4285952) GpE family phage tail protein; STho1984_RS23865 N/A SalmonellaentericasubspentericaserovarThompsonMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA complement(4285912..4286229) PHAGE_Burkho_BcepMu_NC_005882: gp41; STho1984_RS20580; phage(gi48696951) 6.77e-10 SalmonellaentericasubspentericaserovarThompsonMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQAMLSMATEPTATVAGNGAAGEVVSFSAQ complement(4286281..4286805) PHAGE_Burkho_BcepMu_NC_005882: gp40; STho1984_RS20585; phage(gi48696950) 8.93e-90 SalmonellaentericasubspentericaserovarThompsonMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG complement(4286805..4288232) PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STho1984_RS20590; phage(gi48696949) 0.0 SalmonellaentericasubspentericaserovarThompsonMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR complement(4288222..4288419) PHAGE_Burkho_BcepMu_NC_005882: gp38; STho1984_RS20595; phage(gi48696948) 3.53e-11 SalmonellaentericasubspentericaserovarThompsonMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS complement(4288416..4288871) PHAGE_Burkho_BcepMu_NC_005882: gp37; STho1984_RS20600; phage(gi48696947) 4.28e-15 SalmonellaentericasubspentericaserovarThompsonMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ complement(4289032..4289346) PHAGE_Burkho_BcepMu_NC_005882: gp25; STho1984_RS20605; phage(gi48696935) 2.40e-28 SalmonellaentericasubspentericaserovarThompsonMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEVARRESEAGWSRLEREFLEFRADLPLHYVRRDDYLRGQAVLEAKLDALYSKIELIQRGNL complement(4289359..4289964) PHAGE_Pseudo_B3_NC_006548: endolysin; STho1984_RS20610; phage(gi56692593) 6.26e-72 SalmonellaentericasubspentericaserovarThompsonMRYQYVCLVCAMTFLSADAAEPPRASLPWRNELIRTAREIWGLNAPVADFAGQLHQESGWAPDARSPAGAQGMAQFMPATAKWVSQLYPELRENKPFNPSWAIRALVQYDHQLWKSLPAKDNCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPEAILYQHASRYLQWGQASCLY complement(4289967..4290254) PHAGE_Burkho_BcepMu_NC_005882: gp21; STho1984_RS20615; phage(gi48696931) 5.57e-14 SalmonellaentericasubspentericaserovarThompsonMRKIIVPRLSGWLIASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL 4290831..4291178 PHAGE_Burkho_BcepMu_NC_005882: gp01; STho1984_RS20620; phage(gi48696911) 3.52e-30 SalmonellaentericasubspentericaserovarThompsonMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML