gi|00000000|ref|PSQF01000001.1| Subdoligranulum sp. APC924/74 NODE_1_length_244580_cov_657.239, 244580, gc%: 50.41% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 85316..87073 PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; C4885_00400; phage(gi981221017) 1.27e-15 SubdoligranulumspAPC92474MPVLDGSFEAFVTNLGKYNEGELVGEWVHFPTTEEEMKKVFERIGIGSKDEFGQVYEEWFITDYDCSIHGVSNLLGEYENLDKLNYLAARLDEMSRSELEHFVAIMDSGCDEVNDLDDLINLTYNLDNYDFIPDIKDYDDLGRYYFFEGGYNIDNKFGSFVDYIDFERYGEDCAINEGGTLTDAGYIRPTGDSWNRYFDGTLEDIPDEYRVTGSGEELEQPSTITVLVVEPDKKPYVKEIPSSLESLQHEVGGDIEAVYPFEEPVAIVCNEEGKMNGLPLNRALRDDSGEIYDIVAGTFLVTGLTDDSFGSLSPDLLRQFMTEFKMPEQFAKIGDRIVAIPMISEGQQKQTVLEEKSSIVNENTSGMAVDGHIGTWHTIDHKEIDGHTFWLMEHDTFGDDASCIIVDERGELVLSHIYDGFDETAVNLLRQEVMPVEKMPDDSISIEEMKQYGYKWGGMLPMREEAAAEVMKSCQIYRLYGDDTEGLVLDAKEIREHAAKGGIFGVEKADWVAELEKQNPLKAAEMSLEDDYGMIDGIINNGSKEKESSEKREKSSIMDRLKAAKTEPPKEKAAPVKERKPDRDL 87070..87267 hypothetical protein; C4885_00405 N/A SubdoligranulumspAPC92474MSRSAKWKQEWAFFLDTDGRRKYSEVCRRCIHDCKQSFRAVILACPHYISKRSEEAIYCQDKGRK 87565..87900 PHAGE_Clostr_phiCD211_NC_029048: DNA-binding helix-turn-helix protein; C4885_00410; phage(gi981220892) 3.73e-11 SubdoligranulumspAPC92474MIDNRIGKRIKQCRERLGLTQEQFAEKTGFTANYISTLERGASFPRCEKLITLLNALEVSADAIFCDVVDHSTKYKANKLSEELETLPLDAQKRIIQMVELMIEQEKNNSK 88040..88555 PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; C4885_00415; phage(gi564292626) 1.07e-38 SubdoligranulumspAPC92474MKVKKCAFTGHRPQSLPFGFNESDERCIALKQTLRAEIIRLIEQEGVTHFISGMALGVDIYAAEIVLGLKSNYEGITLESAIPCESQAEKWTEEQRDRYFDIASKCDKETLIQHHYTPDCMHKRNRYMVDQADFIIAVWDGRPSGTGKTVQYAQRQGKPVTIINPKTMSVD complement(88626..89264) hypothetical protein; C4885_00420 N/A SubdoligranulumspAPC92474MDWDQYYEKFYDWATSTQISRMSSLTSYGASSEVAEVAQEYMDEKAASRLIKKAVAYGVQFTPEEIYDLSGCCNTEAMNVLLDSSKCRFTKEQLEDLYGAVDDEVLERVAARNKISLFEDDEDEEIDDETVEEEFFDEPVASDPKIGFFTKFFAGIGIADALSSSHASHPGHCTGDCANCPPHYGYRYGRWYYGHGHVHGCEFGGNKGDGSL complement(89290..90432) PHAGE_Synech_S_CBS1_NC_016164: group2 RNA polymerase sigma factor; C4885_00425; phage(gi356870821) 7.41e-06 SubdoligranulumspAPC92474MENRQTAYEKLIELAEKQGYVTFDNIMDCADEYSLPIQDFDWLSNSITTRGILVYSEAPTRNVPSDEDDFDDFAQSDYDAVYTRIIELSPSLESFVTYVRMVIPPQRGEIRQLKYQIVDGNAYARERMIEMHLRLALRVALQRAETYDMDIEDAIGYACIGLVIAVDKYDPDTSGAFASYASLWMIQNISRVQSTQRPLIYYPVHQKEGYFAMYPVLKAHDCIGCERLNECAYAISMVQEKIECSPDEAKKILDQMIPDAQIEDLLELFENYDEEDTPRDTLIDTLLSNLSEETILSDEDALSTVQKNALKEEVASVLSKLTPKEERVLRLRYGFDGHERTLEEVGAEFNVTRERIRQIEGKALRKLRHPSKAKKLKEYY complement(90449..90982) hypothetical protein; C4885_00430 N/A SubdoligranulumspAPC92474MFDKQYRFRGRHAVRVDALTSVFDSNSKAKLFDRNVDVYANAPLVGFLYGRTAEQDDTRNPETNQVYNQNVMGDRVIYSQEELQFNFRLIMLLDKDYEPNEDERIDKAFKHMGENPDDEARFDSYVRGGVDVLYEKLIEGVSSPDEYVTRLYDFIEEFQEKFNDEISSDDILKLCSK complement(90995..92989) PHAGE_Brocho_NF5_NC_015252: gp34; C4885_00435; phage(gi327197619) 6.09e-05 SubdoligranulumspAPC92474MLLESITLENFRQFRHESIDFAQGDNGKNVTIIIGENGTGKTTFAQAFFWCMYGETEFSDKNMLNKLVAAEMKPGQESKVQVILKLRHGTVNYTLMREQTYRKDYSNRVKGDNTVFDIAIKDANGNTSYVKKSQCESEVKGILPKELSRYFFFDGERIEKMSKDISTGKKATDFAEAVKGLLGLNAMYSAIQHFNPKSRLGVIGSYESSYDSHSNSKIQEYTQTIERCKSEIAKIDARLEELESQIEQASARKTEKTEEIKQYAEGEELQRQKERLIQKIARAKDSKANVVKAICKDFNSNMSSFFSVALMSRALELLSDRDFTGKDIPYMHAKTIEYLLNQKVCICGTHLDEGSVPYTKVKALIDFLPPQSISNMISDFKKEAKRRANAQQDLFSHISDNLAVISQQDEEVTDLQDELHTIEGKLSGGDVRSKVRAINSEIQLCDKVIRESGAEKDRILLRKGGYESEAERADTERRNLTLLDDKNKKIEIYKAYAERIYQELLEVYATSEAEIRSKLETTINEIFKQIYEGGLYLTIDEKYHISVYANDYDGDVETSTAQSISVIFAFITGIIKMARDNRNASDDDAKLLSSEPYPLVMDAPLSAFDKRRIKTVCEALPNTAEQVIIFIKDTDGELAEEYMGDKIGCRHYFDKKNEFETVLV complement(93122..95344) PHAGE_Lactob_LP65_NC_006565: hypothetical protein; C4885_00440; phage(gi56693171) 2.02e-10 SubdoligranulumspAPC92474MSLQDVSVKNEYRSLIDNVVQEFYIPLLEQAKVYKRAVGFFSSSSLVEITKGIATMASNGGKIQIVASPYLSDEDIEAIQKGYAERNSIIERAILRQITGEQVDYYSMQRLNLLACLIADGILDIRIAYTEGKNGIGMYHEKMGLIEDGEGNIVAFSGSMNESATAMSINYETIDVFRSWGDQNETDRVRLKENAFFSIWNDSEPNIKVLEFPSISQALIDKYRRSPPNFDLDKEQFPSKDSKIRTLKDGNIEIVTRAIGPRIPENISLHDYQKEAIASWVGENYHGIFDMATGTGKTFTGLGAISKLSEDLNDKLAVVIVCPYQHLVEQWVEDIVRFNMKPIIGYSSSPQKDWKQRLSKAVRDQKIRVDKSFFCFVCTNATFTNSYVQEQISKIHSPVLLVVDEAHNFGAASYARLLDDRFTYRLALSATLERHRDEEGTALLYAFFGKKCIEYSLDRAIEEDKLTPYKYYPVVVHLNDDELTAYEQLSYEMSKCVIKGKNGKYKLNKHGEILALKRARIVAGASEKLDALREEIRPYIHDNNILVYCGATNVLDENADYTSSDTRDIRQIEAVTRILGNEFGMDVAQFTSRENMETRAAIKEQFQRGDRLQAIVAIKCLDEGVNIPGIRTAFILASTTNPKEYIQRRGRVLRKAPNKPYAVIYDFVTLPRPLDSVSSLTTEQAQRDLALVKNELARIKEFGRLSQNSMDANNLIWDIQEAYHITDEESEEGGFEYGTD #### region 2 #### 110021..110034 attL N/A AGATTTTGCATGGA 118649..120283 PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; C4885_00580; phage(gi31415812) 6.47e-23 SubdoligranulumspAPC92474MPGKVYRTAIYCRLSREDGDKVESNSIASQRAICEDYIARHDDLEIVCEPFVDDGYSGVSFNRPNFKKLEDAIRKGAIDCIVVKDLSRFSRNYIDGGRYLEKIFPQLGIRFIAVNDAYDSLTGDPQSDSFVIPFKNLINDSYCKDISMKIRSSLEVKQKNGEFVGAFAPYGYKKSPDNKNQLIVDGAVSEYVQMIFAMYKDGFSIGRIAARLNQMGVLSPMEYKHSAGVKFDTVFKTGDTAKWTYKAVQRILTNEVYIGVLAQGKRGTPNYKVRVVQPKDETEWVKVEGAHEALVSYEDFMAVKTMMKRDMRCSPDQDEAHLFSGFLFCGDCQQSMTRKTVPSKTKKYIYYVCSTNKHSRTCSPHSISAKEVEEKVFRAIHDQIELVVNLEKALEMIERLPSQNRKAFNYEAQIAKLEEEIERYQKLKLRLYEDLSDGIIDKSEYFEFRNSYTKIIEEKQEALLRVKKEMKQTVTTGTTERNWVTLFKQYENIEELNRRVLMALVDRILIYEDHAIEIIFKYKDEYQQTLEYVLGYADELAIAG 120299..122008 PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; C4885_00585; phage(gi31415812) 1.42e-29 SubdoligranulumspAPC92474MARKSRKIVTAEPVCEAAPLQIFPTAIYARLSVENSGKSEKVDVITNQIEICKSYISGCPYLDLVDVYVDNGRTGTVFDRPEFNRLITDIKSGRIKCLVVRDLSRFGRDYIETGTYLERIFPQIGLRFIAIKEHYDNFDTDGSNESLMIPLQNMINALYSKDISRKVSTALKAQMEQGTFQKRNLPYGYRWNEEHTNMVVDEETAKYVRLMFQWKIEGWSTPMILDELDRLGAPNTELRKRQTGTRKGDGCSCKGWYSSTLYGILTNPHYVGDTVLGRSMKAIYKGIKSHNVKDKDEWIVFPNTHEALISREDFQKVQDILQAASEARQTSMQKTEEIRATLVNLFEGKIVCADCGKKMYFHRKRIDKDKRKRWYAYYECSTSVGRRYEHCTSHYTRQDTLEANVLAAIQLQVEAALDYDKLLDKLRGSEGEKNIRDQQNALITSLNLRLNGVSKKRARLYEDYAEGLLDEAEYSFAKKSYDEQYANLSRRLDEAVQRRSKFDEAMSVDNKWITLMKSVSTATQLSQDLVDESVELVKVHEGGAVELVMKYGDIYELTIQSIKEVQEAM 122009..123619 PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; C4885_00590; phage(gi31415812) 4.90e-24 SubdoligranulumspAPC92474MNKDYTIGIYIRLSMADEDTGSGNKAESDSIGNQRMLINRYLDNHPTLSQYPGLEFADDGYTGTNFHRPQFSAMMEKVRHGEINLICVKDFSRFSRDYIETGNYLECTFPFMGVRFISINDGYDSDDYRGTTGGLEVVMRSIIYAAYSKDLSVKTTTAKIQMMKQGKYVGGYAPYGYVLHPEIRNKLKLDPEAAEVIRRVFDEALEGRNTSQIAISLNDDNIPTPGQYFKSKHPDKKKFSYMSDKISWTASMVYKILTNYVYTGATVGHRRKSGGVGSRKSIPQDREDWIVVEGMHEAIVSKEELEQAQSVIRGGVKKPKRNPRYYPLKGLVCCGNCKRALTRRKRRNESGYFFECTHSTNDRDTECPVGERYSEAWIEDTAYKAIGQMLALVEKTAVKEHEISKRRKSAITECADTIRDLQKQSEQLKAVKLRLYEKYTSGSITKAEYLKRKAETDTKMSENEEAIRQGHERMQELDSEHPCSDERLDAVLGEYQKGAGLTYELAHALISAIYVHGHDSIEIVWKFKDIFEDAEI 123628..125106 PHAGE_Paenib_Shelly_NC_041909: aerobic ribonucleotide reductase B subunit; C4885_00595; phage(gi100063) 4.87e-22 SubdoligranulumspAPC92474MLQAVHGWSSTYERLVKSQKFFSSYLTQEDLSRFGRNYIETGRYLERIFPFMGVRFIAINDHYDSAEENDDKGRILIPFNNLINDTYCRDISMRVRSHLDVKRKEGQFIGSFAGYGYQKDPKDKNHLIIDEYAAGIVQEIFKQKLNGMSSQRIASHLNELGVLPPNEYKRANGFNYTCGFQAGLNQKWTVVSVNRILKNESYTGTLIQGKRRKINYKVKKSHDVGSENWIRVEDAHDAIISKGEFQQVQQLLELDTRTAPSQTTVYPLSGFLRCADCGQNMIRRTVTKNGKKYQYYHCSTYKNGGGCTPHMINSEKLTESVLAAIRHQVTLLVEAEKVLSNAELASGEQIGIKILDSQITALEAELERYSNLKIRLYQDLCDDVVSREEYGEMNTRFAQKIKEAQDKIQEIREKKQEALKHDTLLPTWLEEFKQYEHIKTLERRVVVELIDHIDVHSKTEIEIHFCFEDELHSITEKFMEYQAHHGNEVAEE 125103..126632 PHAGE_Strept_DCC1738_NC_024361: phage integrase protein; C4885_00600; phage(gi658307531) 7.67e-10 SubdoligranulumspAPC92474MKWVSYTRSISSRIGEENPSNTIAEQNERIARYLKKCGCSVSEKYSDRRRTAEATEGFDKLVQDGMARKFDAVVVDSIFRCGRTLPFAIEALQRTFYPLGIQFAVVEDDFCSIDKTAEEVAEYFNGKTIDKIRSEFITNRQNHFEEGTLTHRQAKYGYALSEDRRSLVLNPESAQVVKLIFQMYLEDMKIPEIARALDVQGVQTPQVQMAKKKRSRTKNKWQDSTIRSILKNPLYIGKCTLTLAKAKRELEVPAIVSKTEFQKAQKKLESTRLPSRKKARKKPNLLFKKIYDKESGKGLLCRTSEDESQQIYSFDKGYRCFSGKAPFIESEKIFREILSALEKEKMQAAHIDRVLDLNPEKVKQCMDAGLLQYRKRANEIVAHLMAKDDERTAVYRQYEQGSILLEQVEEYEHQYQVAVQKQEAAFKKVMLAVNDIEKAFSHGNPWLMKFRAISIPEKLERTHLKEWLDHVWIVDFEQVEVILQESEWKRFFPEEWLNNGEEDCNGKKE 126616..128307 PHAGE_Bacill_phBC6A51_NC_004820: Site-specific recombinase; C4885_00605; phage(gi31415812) 1.42e-19 SubdoligranulumspAPC92474MARKSRKNMMPQAAVQEAVQQNEKELLRTAAYARLSVENGGHETEDSLHTQILQIHNYIRENPELTLTDTYADNGFTGTRFDRPEFERMMQDIRTGKIQCIVVKDLSRFGRDYIETGSYLETIFPMLHVRFIAINDDFDNIRQSDVDSLAVPIKNMVNSLYAKDISKKISLSYQMRREKGIPTSWCTPYGYQLNQQGNKLEATEDAKWVKLIYQWYLAGVSTNEIARRLEFLEVARPNERLNRKLHEGDDPTYNKWHPSTVLRILNSSAYIGELVSGKTQTASYKGIGLHPVEKKKWHIVENAHEAIILKSDFEKVQARREQNKEKREMAMARSKATREKCYNHLSGMVYCGCCRRNMTFERRVHGTVKETHYGVFICKRKKNTTPCAYHAVPEKMLMMVAMDQIHHLVSTMCEEEKLVKDMMRGSNLDSARSIKMKENSILFRIQEAEERRLRLYEDYKAEILDDDEYSQLKEHYIAEKQRLEHELQKQRQRALELEKRIRICDAQMERMRGILNQNEFDEELVHELIKRIYVGMDNSVEVEFKCSDPYQEVLAIMSEVQNE 128168..129895 PHAGE_Clostr_PhiS63_NC_017978: gp24; C4885_00610; phage(gi388570653) 2.55e-20 SubdoligranulumspAPC92474MNLMKNWCMNLSRESMWEWTILWRSNLSAATPIRKCLQSCRRFRMNDKIAIYLRLSLADGDLKKGSKDESNSIENQRMLLHDYIGKQEDLFGEIVEYVDDGYTGTNFNRPAFQKMIVDLKQGNIKVIMVKDLSRLGRDYIGVGDYIEQIFPLMGVRFIAVNNSFDSMKLNNGTPGIEVAVSNLVNNMYSRDIAKKIRAALETNWKNGKATCTNVPFGYVWNKKGGRRWEIDPEAAVCVKKVFELALSGRNTTQIAYGMNELNLPTPGLYAKRKNLLMGSNPIIAPDSEMLWNAAIVWRILRRYEYTGALVMGRRKKIDVNTTSVRTLPEDKWIIAENAHEAIVTKDEYYQAQKAIRNVTPIQYKVGDDFALKGKICCGNCNRQLRHERQYGEMVFYCGYKRSAGKFSKCYGGYYREYSVNAKVARAIKTVFYALDVVNQGMQKKQSITVRCVDIEDLEKQAEAIRVEQIKLYESYADGVLLRDAYIEKKKALSEKLAALQDSIRTEKEEQECADELDEEIRNLTKQASQKTYIGGLTKECVDAFVSMVYLYDDQTMKVEFNCEDVIRRALEKYGA complement(130093..130434) PHAGE_Clostr_phiCD211_NC_029048: DNA-binding helix-turn-helix protein; C4885_00615; phage(gi981220892) 5.76e-09 SubdoligranulumspAPC92474MATDYKALGKRISNARKQAGITQEALGEQLNMTRKHISVIESAIKRPSLDALVDIANALDVSTDDLLVDSLMHSTSTSNSEIHRLLLDCNEIEQEILTRMVREMKAILYGLGI 130685..131662 PHAGE_Mycoba_Omnicron_NC_028832: DNA primase; C4885_00620; phage(gi971747861) 2.56e-09 SubdoligranulumspAPC92474MADKVEKRILTLYSDVQATSVHWLWYPFIAVGKITLLQGDPGDGKSTMMMNLIAELSKGGKTPDGKPIGTPQRVIYQCSEDGVSDTIKPRLERCGADCRKVAFINEETYSGLTLDDERIRQAIIEFRPRLVVIDPIQAYLGSDSDLQIAGRARKLMQRLGMWASVYDCAIVLIGHLNKKEGTKGLYRSLGSIDVVAAARSVLQVERDQKDTDIRIVRQIKNSLAPSDGEIRFSITAEMGFQWLECKSTFVSSEQPKVPEFESKTEKAAYLIKKLLSDGDMRAREIYMRMKDEGISRRTAENTKKELGIRSYRKMRQWYWSIHTGE 131556..133511 PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; C4885_00625; phage(gi77020163) 3.72e-28 SubdoligranulumspAPC92474MKESAAEPQKIRRKNSVSEVIGRCDSGIGASIRENEEKHMITGEVEAVDRKQKIRDRYKGVDISELEVIPAKIIEDLETSSVIRRVAAYIRVSTDNDEQTSSYELQKNYYTDYIQAQPGWVFVGIYADEGISGTSLEHRKGMQQLIEDCKAGKIDLVLTKSIARFARNIVDCLSVIELLKNLNPPVGVKFEADNIYTLDSNGRMILTILASVAEEESHSKSIIMNWSIDRRFSRGLFLTPALLGYDKDEEGNLVINPEEAQTVKVIYYLYLNGYSLTEIATLLMEYSRKTKLGRVEWNPGTLAGVLANERHCGDVLARKTFTPNFLTHKSKKNNNDRTQYRQKNHHEAIVSREVFNAANHLRASRNYSKKNRPLPVLSVVEDGILRGYVPFDKDWTGFSAEEYREASESVMKEPDVTVTADVKKRLDLTGYEIVRVQYFSTMQNPAMTISNGRLRFNTACLKKFENVEYVELLLNSVERCIAIRPCDKNNPNAIRWGRLKEGRWCASTLGCRGLAKTLFDIMEWDEDLRYRFRGQFLEQGDNKMMLFAFDEPEMIKVEEIVLPPKENTEEDEGETVKKKIYIFPPEWAGTFGQPITSIAQVGILRQEHYAGNWDVFRPATEIEEMNIFTAESLNELLREAEKIMEGWTDYR 147299..147312 attR N/A AGATTTTGCATGGA