gi|00000000|ref|QUCW01000001.1|  Roseburia sp. AM16-25 AM16-25.Scaf1, whole genome shotgun 762199, gc%: 44.03%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
248235..248246                     attL                                                                                 N/A                 TGCCTTAGACAT
complement(248533..250521)         PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; DW183_01200; phage(gi937456185)     6.43e-36            RoseburiaspAM1625MKEKTKVYIYTRVSTAVQVDGYSLDAQKSRMKAYAEFNDFEIVGEYEDAGKSGKSIEGRLEFNRMMEDIKSGKDGVSYVLVFKLSRFGRNAADVLSTLQVMQDFDVNLICVEDGIDSSKDAGKLMISVLSAVAEIERENIRVQTMEGRIQKAREGKWNGGFAPYGYKLEKGMLYINEEEAEAIRIIFDQYVHTDIGANGLAKYLANHGINKIQRQNGKNPLFDAALIRRILKNPVYCGKIAYGRRRTEKVHGTRNDYRLVEQENYLLVDGLHEAIVSEGLWHEAQVKLLAQAKKYEKVNNGKDNKVHLLTGLLKCPICGAGMYGNKSIKHKPDGTKYKDFFYYGCKHRTMTRGHKCEYKKQINEELLDGAVAEVIIKLVSNPKFAAMMQQKINMKIDTSAIEQEIANYEKQLRQSYATKSRLIDEIDTLDPDDKHYIKRKADLDDRLYKMYDKIEDTENLLIEARAKKMAIEAEKLTADNIYKVLIYFEKLYAVMDEQEKRQIMESLISEIHIYEERQPNGQWLKSIKFKLPIIEEDMEMSLDSDTHVETVVLLSHKKPDGHINVKVEFGEGEGKVPLDNIAKRAEEYKPKERVTYKMIKEYIEAKYGFKVHTAYIAEVKRDLGLPMYDAPNAVEELKQPRKHPTAEKVEAIKDALKHFEVI
complement(250577..251584)         cell filamentation protein Fic; DW183_01205                                          N/A                 RoseburiaspAM1625MNNYDDMNQKSNMIIYTTEDGLTKIETTFDEDTVWLSIDQMAELFQRDKSTISRHIKNVFSEGELQRESVVANFATTAADGKTYQVDYYNLDVIISVGYRVKSKRGTQFRIWATNILKEYMKKGFALDDERLKNLGGGGYFKELLERIRDIRASEKVFYRQVLEIYATSIDYDPKAEISIRFFKKVQNKIHYAIHGQTAAEVIYTRADAEKEFMGLTTFAGNQPTLKEAIVAKNYLNEKELRAMGQLVSGYLDFAERQAEREQAMTMQDWAEHLDRILTMSGEQLLIGNGSITHKQAVDKATGEYRKYKTRTLSDVENDYLNSIKMLEQKTDGKK
complement(251857..253125)         recombinase; DW183_01210                                                             N/A                 RoseburiaspAM1625MARNDGVDRTCARNMDVTDNDIGDAQAHNEREKEIYSNEDIIPERSSLNVHFKEPTGSYAEMFEQMKADNIISTRGLKADAVHFNEMVFDVNSAYFDNHGGYEYARQFYEEAYKSAVEIVGGEQYILSAVMHADEINRAMSEALGKDVFHYHLHVVYVPVVEKQILWSKRCKDEALRGTVKETIMQVSRSKKWLSKPAVDKDGKPILQVNGKPVLRKSYSVLQDDFFQHMRAAGYTDVERGERDSTEEHLTVTQFKVAKEKQRLEAVTAELNQKEAQLDDTTQAAEKKKQELKSLQAQTKAATGIAVTVQELESMGKKSFTGNIVLTPDECRTLKNYAVSSFAEKAEKLKYQQKYETAKKDAGVWKKRYEKLLEQAQPYLDAVKLAPERVRAFLNAVLTRGKEKQDIPQERGRKRKESTIDR
complement(253475..254848)         PHAGE_Strept_315.6_NC_004589: putative DNA primase/helicase; DW183_01215; phage(gi28876472)     1.80e-23            RoseburiaspAM1625MSENRKLLEMNVPMWFDGKSINEALFCEDFLRTRQIIFANGAFFTPDGRVTDDLPLRGEIFEELKYCAVNNIPRKISNIIEIMKLAAHVEDFPPEQDRIHLANGTLMLDGTFTEGKPDIVRNRLPVFYRPDTPKPVLWLSFLNGLLYPEDIPTLQEFIGYCLIPSNKGQRMMVIKGNGGEGKSQIGAVLGQMLGSSMKDGSIGKISENRFARADLEHILLCVDDDMRMEALRQTNYVKSIVTAQGKMDLERKGKQSYQGWMFARLLAFSNGDLQALYDRSDGFYRRQLVLTTKEKPAGRMDDPDLAQKMKAEVEGIFLWAFEGLQRLVANNFKFTESERTKTNRESVKRDNNNIFDFMESEGYIRLKADASISSKELYEIYRMWCEENSLPPLKSRSFSDSVVANLSRYNLEHTNKITNSAGRRVWGFMGIEAVARPNINGFYDVSPCTYVPEEWRD
complement(254823..255440)         PHAGE_Helico_KHP30_NC_019928: putative primase; DW183_01220; phage(gi431810549)      3.79e-08            RoseburiaspAM1625MNIFETVKAAVTVRQAAEHYGLKINRSGMICCPFHDDRHPSLKLNEDYFYCFGCGAKGDVIDFVARLLDLSAYEAAQRLAADFGLDRPPSVVAQVKKYRPRVNQSKQDELFCMNVLSGYLHLLEDWKERYAPEAPEDEPDERFVEACHKLEYVEYLNDLLLMSDQEERTDTVKELLTDGTIARMQTRLDEQKKEVRCHVREQEIA
255672..255881                     PROPHAGE_Clostr_E88: putative transposase; DW183_01225; phage(gi28211552)            1.20e-10            RoseburiaspAM1625MKYLSTFEVAEKWGISPRRVGILCNNDRIPGAQRAGSRWIIPEDAEKPTDARIKSGKYIKQKTDRGEEA
255881..256708                     PHAGE_Lactob_iLp84_NC_028783: repressor; DW183_01230; phage(gi971743094)             1.31e-05            RoseburiaspAM1625MADTYLPADVRKRIVDVMRERKMTQRELALRIDVNESTISRFLSGKTEKLSEESVIRIARVFNVSTDFILGTTVIPDKKNYDISELGLSVEAAKNLYTGKVNNDVVNRLLENPRFAMVTYMIAQYMDDTLARGYAAQNQMFATVGSLLLGQNQAPEAVQAARTANAMKIPAYQADQTTIQNTFMTVVKEIKKEAGSDLVAAKAISKEATEKMFAELTKGQDMQNPTITPEAVVDAITGSISGVDGVNQEALDNFNKALLGLMQTMVLPEDDGQDN
256689..257330                     PHAGE_Bacill_phiNIT1_NC_021856: putative sigma factor; DW183_01235; phage(gi526118575)     6.41e-09            RoseburiaspAM1625MMDKITNEQLCIAAQSGDKWAENALVENNLRFIRKTAYEIWSAQRELNVALGIELNDLVQEGSLGLLGCISSFQPDYGNKFLTYAAPAIHNAMLDYIRRLNPTFEAKNLDCIIRLDEVKKGENKGQHEFIADSRVQNPEQIFIAKETHEEIHTALEMIDEREKAYLWYRFGFEDDVLHPLSETAKHFHLSESRAKSTEKLALDNFWLELPWWY
257357..258028                     DNA-binding response regulator; DW183_01240                                          N/A                 RoseburiaspAM1625MEKYKILIIEDDPIIQTELQVLLNGNGYEASAVTDFTSVMQAVKNTHPYLILLDIKLPQESGYSICSQIRSFSNVPIIFVTSCNTDMDELNSILLGGDAFITKPYNTAILLAKISSLMKRAYPIEQIERLNWQGAILHLESSTIEYDGNQAELTKNELKILYYLFKHAGKICSRNDIVDYLWDNQLYVDDNALSVNINRIREKLAGIGLTDFIKTKHRQGYTI
258025..259038                     sensor histidine kinase; DW183_01245                                                 N/A                 RoseburiaspAM1625MNSKRYWKNRLPFLLTNLVCMAALTVFLLVCGNSASAVVLILIVWALILLMGLVLTYWKRKRQMKKLLDMAKQLSERYLISEVMELPEQAEDQVYYQILKMAGKSMLEQIGEVERERLEYKEYIEQWIHEIKTPITAMKLLCENHRTNWTKELLLELEKTNRFTEQALYYARSEHTEKDYSVREMALSQVVHQAIADNKYLLLQSGMRLEVEEMQDTVYSDEKWVRFILNQLIVNAVKYRTKQPVLRISTHKWQDLVVLVVEDNGIGIAASDLPRIFEKGFTGQNGRLIQQSTGIGLYLCKRLCEKLGIGITAESSEHGTAISLSFHINCLIHEVQN
259140..259907                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; DW183_01250; phage(gi371496158)      2.94e-44            RoseburiaspAM1625MKEILKLDHIQKYYGNGGNVTKAIQDISFSVQEGEFVGIMGASGSGKTTLLNCISTIDTVSAGHIYLDGTDVTEINEKQIARFRRENLGFVFQDFNLLDTLTISENIALALTINKVPAGEIDGRVREMAGKLNITDILDKYPYQVSGGQKQRCACARAIINQPKLILADEPTGALDSHSSQMLLSTIQSINEDLGATILMVTHDAFSASYANRILFMRDGAIFTEIRKGGDSRRTFFEKILDVLTMMGGGMSDVR
271543..271554                     attR                                                                                 N/A                 TGCCTTAGACAT

#### region 2 ####
714923..714935                     attL                                                                                 N/A                 CTTCCTCCTTTAA
727972..728175                     excisionase; DW183_03640                                                             N/A                 RoseburiaspAM1625MNNNDIPVWEKYTLTIEEASKYFRIGENKLRRLAEENKDAGWLIMNGNRIQIKRRQFEQVIDKLDAI
728254..729447                     PHAGE_Strept_phiARI0746_NC_031907: sliding clamp DNA polymerase; DW183_03645; phage(gi100042)     3.51e-17            RoseburiaspAM1625MKEKRRDNKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSLRELEQQIRRDIEDGIDSTGKKMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGARSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFYIAIQDDCVRKNPFDFKLSEVLENDTKEKVALTEEQEQALLSFIKTDNVYHKHYDDVLILLKTGLRISELCGLTVADIDFKNEVVIIDHQLLKSKEQGYYIETPKTKSGIRQVPLSRETIQAFQRVMKKRPKAEPFVIDGQSNFLFVNHKGKPKVAIDYNALFVRMVKKYNKHHKDNPLPHITPHTLRHTFCTRLASKNMNPKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA
complement(729454..729615)         cobalamin-binding domain-containing protein; DW183_03650                             N/A                 RoseburiaspAM1625EIIYVFLTIFLYLPKCPQSLILSALRAFCFCGKPRISRSIFLYFPCQSWLKSW
complement(729952..730206)         hypothetical protein; DW183_03655                                                    N/A                 RoseburiaspAM1625MKMSENNDYIQLPPLKKDTPSDVVAFMWKYMKVPENSREKVKNLLKDANENGVKLSHQAPTLYDVVPKEEITEFEELIRKTIADI
complement(730214..730510)         hypothetical protein; DW183_03660                                                    N/A                 RoseburiaspAM1625MFILKLVGKILLLPVWLILFVIGLAVKMTVQTYAVVRGILGFIFTLLIIATAYCYHDWVQVAFLFSLSVILYLILFAGVFVDTVLDMTRERIIDFIIS
complement(730520..731518)         PHAGE_Strept_9872_NC_031094: hypothetical protein; DW183_03665; phage(gi100030)      5.11e-21            RoseburiaspAM1625MEKKMTFNYFYGTEADQFSFYRIPKALFTDSYFKDLSSDAKILYGLMLDRMSLSIKNQWFDDKNRAYIYFSIEDIMELLNCGRNKAIKSMRELDDETGIGLIEKRRQGFGKVNVIYVKTFMPEKTDEKKFEEELKKFKKQTSVENEEPAEVYNSNFMKSQNQTSRSPENKLQEVYISNPNNTNLSDTEMNDNKSNPIISVDEKRFDSDNRSEDYQAYENLVKETIDYESLEVTHHDDMRQVDEIVNLIVETVMCKNDKILIASNWYPASLVKKKFLMLTYSHIEYVLHCMSGNTTKVKNIKKYLLAALFNAPSTMNGYYQAEVNHDMPGLVR
complement(731597..732499)         PHAGE_Gordon_Bowser_NC_030930: hypothetical protein; DW183_03670; phage(gi100051)     5.42e-08            RoseburiaspAM1625MKNRSGEKIKLASIDELLGVVNEESAMEIEISKIHPFKNHPFKVLDDEKMQDLVESVKINGVLTPVLLRMDENEEYEMVSGHRRMHAAQLAGLTTIPAIVRELSDDDAIVAMVDANIQREELLPSEKAFAYKMKLDAMKRQGSRTDLTLCQSGTKSRTDQLLGEQVGESARSVQRYIRLTELIPELLDLVDNKKLQFTVAVDISYIDKEVQEWIYEYISDTGFIKPKQIAALRNQLNDGPINQIQMLSIFNNCVMAKKVSRSLTFSEKKLTKYFPDDYTAKDMEQVIESLLEKWMQEQSC
complement(732489..733274)         PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; DW183_03675; phage(gi22091150)     7.25e-33            RoseburiaspAM1625MCKVISVVNQKGGVGKTTTTVNVGIGLAREGKKVLLIDADPQGSLTASLGYEEPDDLRITLATIMMDVINEEEISLEDGILHHQENVDLLPANIELSALEVTMGNVMSREMIMKEYIDAIRCRYDYILIDCMPSLGMMTINALVSSDSVLIPVQAAYLPVKGLQQLIKTILTVKKRLNRKLAIEGILLTMVDFRTNYARDIASRVHTTYGSQIEVFENVIPMSVKAAETSAEGKSIYMHCPKGKVAEAYMKLTQEVLNNEK
733280..733292                     attR                                                                                 N/A                 CTTCCTCCTTTAA
complement(733289..734254)         PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; DW183_03680; phage(gi100046)     1.01e-09            RoseburiaspAM1625MVKQQCLFGTLLSIKVPGRHFLVPESWRKGVKMTEPNRQSGEKEERIIEIEIERLRPFKEHPFQVKDDKEMFLLQESIEKYGILNPLIVRPVPDGYYEIISGHRRKHAAEKLGYRKVPVIIRVLSEDDSILSMVDSNLHRERISYSEKAFAYKLKNDVLKRKSGRKKSQVDHKTPRKRSIDIISEDCGDSPKQVQRYISLTKLIPEMLQKLDDEIISFCPAVEIAALKENEQRELLKAMDYAQAIPSLSQAQRIKQLSKEKQLSLEKMEEIMCEVKKGEITRVAFTNEQLHKYFPNSYTPAMMKREILALLKLWKKESWES