Criteria for scoring prophage regions (as intact, questionable, or incomplete): Method 1: 1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used. Method 2: 1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered). Method 3: 1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found. 2. If the size of the region is greater than 30 Kb, the score will be increased by 10. 3. If there are at least 40 proteins in the region, the score will be increased by 10. 4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10. Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region. If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact. Totally 7 intact prophage regions have been identified. REGION REGION_LENGTH COMPLETENESS(score) SPECIFIC_KEYWORD REGION_POSITION TRNA_NUM TOTAL_PROTEIN_NUM PHAGE_HIT_PROTEIN_NUM HYPOTHETICAL_PROTEIN_NUM PHAGE+HYPO_PROTEIN_PERCENTAGE BACTERIAL_PROTEIN_NUM ATT_SITE_SHOWUP PHAGE_SPECIES_NUM MOST_COMMON_PHAGE_NAME(hit_genes_count) FIRST_MOST_COMMON_PHAGE_NUM FIRST_MOST_COMMON_PHAGE_PERCENTAGE GC_PERCENTAGE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1 30.4Kb intact(100) integrase,capsid,head,portal,terminase 5753-36156 1 27 13 9 81.4% 5 yes 13 PHAGE_Salmon_ST64B_NC_004313(3),PHAGE_Shigel_SfIV_NC_022749(3),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Entero_SfI_NC_027339(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Bacill_Fah_NC_007814(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Burkho_KS9_NC_013055(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Aeromo_31_NC_007022(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Staphy_PT1028_NC_007045(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Rhizob_16_3_NC_011103(1),PHAGE_Clostr_phi3626_NC_003524(1),PHAGE_Thermo_THSA_485A_NC_018264(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Aeromo_44RR2.8t_NC_005135(1) 1 11.11% 52.94% 2 60.6Kb intact(92) tail,integrase 1209415-1270054 1 61 53 7 98.3% 1 yes 19 PHAGE_Escher_phiV10_NC_007804(33),PHAGE_Entero_Tyrion_NC_031077(32),PHAGE_Salmon_SPN1S_NC_016761(32),PHAGE_Escher_TL_2011b_NC_019445(25),PHAGE_Salmon_epsilon15_NC_004775(25),PHAGE_Burkho_BcepC6B_NC_005887(2),PHAGE_Pseudo_F116_NC_006552(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Bordet_BPP_1_NC_005357(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_Bp4_NC_024142(1),PHAGE_Staphy_42E_NC_007052(1),PHAGE_Entero_vB_KleM_RaK2_NC_019526(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Thermu_phiYS40_NC_008584(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Entero_IME11_NC_019423(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Salmon_II_E1_NC_010495(1),PHAGE_Gordon_Cucurbita_NC_031029(1),PHAGE_Gordon_Bachita_NC_030936(1),PHAGE_Vibrio_pYD38_A_NC_021534(1),PHAGE_Gordon_Smoothie_NC_030696(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Caulob_Cr30_NC_025422(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Escher_ECBP1_NC_018854(1),PHAGE_Escher_vB_EcoP_PhAPEC5_NC_024786(1),PHAGE_Halovi_HGTV_1_NC_021328(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Escher_N4_NC_008720(1),PHAGE_Klebsi_K64_1_NC_027399(1),PHAGE_Thermu_TMA_NC_015937(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Burkho_BcepNY3_NC_009604(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Achrom_JWF_NC_029075(1),PHAGE_Pseudo_AF_NC_019923(1) 32 54.09% 54.42% 3 14.7Kb incomplete(30) head,integrase 2489432-2504182 0 11 9 2 100% 0 yes 4 PHAGE_Entero_P4_NC_001609(6),PHAGE_Entero_N15_NC_001901(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Rueger_DSS3_P1_NC_025428(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Natria_PhiCh1_NC_004084(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_EF62phi_NC_017732(1),PHAGE_Lactob_LF1_NC_019486(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1),PHAGE_Burkho_KL3_NC_015266(1) 6 54.54% 52.29% 4 47.5Kb intact(100) integrase,terminase,head,tail 2719000-2766594 1 62 57 5 100% 0 yes 27 PHAGE_Cronob_ENT47670_NC_019927(16),PHAGE_Vibrio_pYD38_A_NC_021534(11),PHAGE_Salmon_IME207_NC_031924(10),PHAGE_Salmon_64795_sal3_NC_031918(9),PHAGE_Salmon_II_E1_NC_010495(7),PHAGE_Escher_HK639_NC_016158(7),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(6),PHAGE_Entero_phi80_NC_021190(6),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(6),PHAGE_Entero_VT2_Sakai_NC_000902(6),PHAGE_Stx2_II_NC_004914(5),PHAGE_Stx2_vB_EcoP_24B_NC_027984(5),PHAGE_Entero_HK022_NC_002166(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_933W_NC_000924(5),PHAGE_Entero_SfI_NC_027339(5),PHAGE_Edward_GF_2_NC_026611(5),PHAGE_Cronob_phiES15_NC_018454(4),PHAGE_Salmon_SPN3UB_NC_019545(4),PHAGE_Entero_YYZ_2008_NC_011356(3),PHAGE_Entero_ES18_NC_006949(3),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(3),PHAGE_Salmon_SEN34_NC_028699(3),PHAGE_Pseudo_PS_1_NC_029066(3),PHAGE_Escher_PA2_NC_028449(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Entero_IME10_NC_019501(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_mEp213_NC_019720(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Entero_Tyrion_NC_031077(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Salmon_118970_sal4_NC_030919(2),PHAGE_Shewan_3/49_NC_025466(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Entero_mEpX2_NC_019705(2),PHAGE_Sinorh_phiLM21_NC_029046(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Pseudo_BS5_NC_031917(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Klebsi_PKP126_NC_031053(1),PHAGE_Klebsi_vB_KpnM_KB57_NC_028659(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Escher_ECBP5_NC_027330(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Vibrio_PVA1_NC_023605(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Pseudo_YMC11/06/C171_PPU_BP_NC_030923(1),PHAGE_Salmon_SPN1S_NC_016761(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Salmon_7_11_NC_015938(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Vibrio_ICP1_NC_015157(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Ralsto_RSK1_NC_022915(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Vibrio_pYD21_A_NC_020846(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Pseudo_H103_NC_028819(1),PHAGE_Edward_MSW_3_NC_020082(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Pseudo_PaBG_NC_022096(1),PHAGE_Pectob_Peat1_NC_029081(1),PHAGE_Salmon_epsilon34_NC_011976(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Clostr_phiCT19406A_NC_030950(1),PHAGE_Pectob_PP90_NC_031096(1) 16 25.8% 52.49% 5 17.6Kb incomplete(50) transposase,tail,plate 3036339-3053939 0 21 15 4 90.4% 2 no 4 PHAGE_Salmon_SEN34_NC_028699(12),PHAGE_Psychr_pOW20_A_NC_020841(4),PHAGE_Aggreg_S1249_NC_013597(4),PHAGE_Haemop_Aaphi23_NC_004827(3),PHAGE_Entero_P1_NC_005856(1),PHAGE_Mycoba_Minerva_NC_026584(1),PHAGE_Klebsi_PKP126_NC_031053(1),PHAGE_Vibrio_vB_VchM_138_NC_019518(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Vibrio_CP_T1_NC_019457(1),PHAGE_Mycoba_MiaZeal_NC_028953(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Mycoba_Courthouse_NC_023690(1),PHAGE_Mycoba_Wanda_NC_022067(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Mycoba_Redno2_NC_022066(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Salmon_BP63_NC_031250(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Idioma_Phi1M2_2_NC_025471(1) 12 57.14% 54.30% 6 13Kb questionable(75) transposase,head,integrase 3808707-3821741 0 14 9 4 92.8% 1 yes 3 PHAGE_Entero_P4_NC_001609(7),PHAGE_Entero_186_NC_001317(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Rueger_DSS3_P1_NC_025428(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1) 7 50% 49.87% 7 23.9Kb incomplete(20) integrase 4687386-4711366 0 30 24 4 93.3% 2 yes 15 PHAGE_Escher_HK639_NC_016158(6),PHAGE_Entero_phi80_NC_021190(6),PHAGE_Salmon_SEN34_NC_028699(5),PHAGE_Entero_mEpX1_NC_019709(4),PHAGE_Phage_Gifsy_1_NC_010392(4),PHAGE_Entero_HK225_NC_019717(4),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Entero_ST104_NC_005841(3),PHAGE_Salmon_SE1_NC_011802(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Entero_mEp213_NC_019720(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Escher_Cba120_NC_016570(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Escher_PhaxI_NC_019452(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Ralsto_RSK1_NC_022915(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Pseudo_PPpW_3_NC_023006(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Serrat_phiMAM1_NC_020083(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Vibrio_X29_NC_024369(1) 6 20% 52.80% 8 37Kb intact(150) portal,terminase,capsid,tail,lysis,lysin,plate 4997771-5034827 0 47 40 5 95.7% 2 no 6 PHAGE_Salmon_Fels_2_NC_010463(35),PHAGE_Salmon_RE_2010_NC_019488(34),PHAGE_Erwini_ENT90_NC_019932(11),PHAGE_Entero_186_NC_001317(11),PHAGE_Entero_PsP3_NC_005340(8),PHAGE_Salmon_SEN1_NC_029003(8),PHAGE_Salmon_SP_004_NC_021774(5),PHAGE_Burkho_KS14_NC_015273(5),PHAGE_Burkho_KS5_NC_015265(4),PHAGE_Ralsto_RSA1_NC_009382(3),PHAGE_Yersin_L_413C_NC_004745(3),PHAGE_Entero_WPhi_NC_005056(3),PHAGE_Entero_fiAA91_ss_NC_022750(3),PHAGE_Escher_pro147_NC_028896(3),PHAGE_Ralsto_RSY1_NC_025115(3),PHAGE_Entero_P2_NC_001895(2),PHAGE_Escher_pro483_NC_028943(2),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Erwini_vB_EamP_Frozen_NC_031062(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Erwini_Ea9_2_NC_023579(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Pectob_PP90_NC_031096(1) 35 74.46% 51.11% 9 38.3Kb intact(110) transposase,head,portal,terminase,lysin,protease,integrase 5215786-5254161 0 42 37 4 97.6% 1 yes 12 PHAGE_Salmon_SEN34_NC_028699(14),PHAGE_Salmon_Fels_1_NC_010391(11),PHAGE_Cronob_ENT39118_NC_019934(5),PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Escher_TL_2011c_NC_019442(4),PHAGE_Escher_P13374_NC_018846(4),PHAGE_Escher_phi191_NC_028660(3),PHAGE_Haemop_Aaphi23_NC_004827(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Salmon_SSU5_NC_018843(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Salmon_ST64T_NC_004348(2),PHAGE_Vibrio_vB_VchM_138_NC_019518(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Vibrio_CP_T1_NC_019457(2),PHAGE_Iodoba_phiPLPE_NC_011142(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Aggreg_S1249_NC_013597(2),PHAGE_Psychr_pOW20_A_NC_020841(1),PHAGE_Pseudo_14_1_NC_011703(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Burkho_BcepB1A_NC_005886(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_YMC11/06/C171_PPU_BP_NC_030923(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Vibrio_pYD21_A_NC_020846(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Edward_MSW_3_NC_020082(1),PHAGE_Pseudo_PB1_NC_011810(1),PHAGE_Pseudo_NH_4_NC_019451(1),PHAGE_Escher_N4_NC_008720(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Salmon_BP63_NC_031250(1),PHAGE_Pectob_PP90_NC_031096(1) 14 33.33% 53.76% 10 43.2Kb intact(110) integrase,head,transposase,tail 5287606-5330820 0 31 15 2 54.8% 14 yes 11 PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Salmon_SJ46_NC_031129(3),PHAGE_Entero_P1_NC_005856(2),PHAGE_Cronob_ENT39118_NC_019934(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Bacill_SPbeta_NC_001884(2),PHAGE_Mycoba_Shipwreck_NC_031261(1),PHAGE_Bacill_Bobb_NC_024792(1),PHAGE_Erwini_phiEaH2_NC_019929(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Ralsto_RSF1_NC_028899(1),PHAGE_Mycoba_Charlie_NC_023729(1),PHAGE_Mycoba_Malithi_NC_026605(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Vibrio_PWH3a_P1_NC_020863(1),PHAGE_Bacill_Bp8p_C_NC_029121(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Ralsto_RSL2_NC_028950(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Mycoba_Butters_NC_021061(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Campyl_CP21_NC_019507(1),PHAGE_Campyl_CP220_NC_027997(1),PHAGE_Bacill_phiAGATE_NC_020081(1),PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) 4 9.67% 54.78% 11 35.6Kb intact(130) transposase,tail,capsid,head,portal,terminase,lysin 5532171-5567791 0 45 28 13 91.1% 4 yes 22 PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(7),PHAGE_Pseudo_phiPSA1_NC_024365(6),PHAGE_Acinet_Bphi_B1251_NC_019541(6),PHAGE_Escher_HK639_NC_016158(4),PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Burkho_KL1_NC_018278(3),PHAGE_Staphy_SPbeta_like_NC_029119(3),PHAGE_Pseudo_PS_1_NC_029066(3),PHAGE_Stenot_vB_SmaS_DLP_2_NC_029019(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Salmon_SJ46_NC_031129(2),PHAGE_Salmon_ST64T_NC_004348(2),PHAGE_Klebsi_phiKO2_NC_005857(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Caulob_karma_NC_019410(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Rhodof_P26218_NC_029061(1),PHAGE_Burkho_BcepC6B_NC_005887(1),PHAGE_Pseudo_H105/1_NC_015293(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Pseudo_PA1phi_NC_023700(1),PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Caulob_magneto_NC_019407(1),PHAGE_Xantho_Xp15_NC_007024(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Cyanop_KBS_S_2A_NC_020854(1),PHAGE_Vibrio_pYD38_B_NC_021561(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Pseudo_MP48_NC_024782(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Caulob_swift_NC_019411(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Escher_K1_dep(1)_NC_027994(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Caulob_phiCbK_NC_019405(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Salisa_1_NC_017983(1),PHAGE_Pseudo_H70_NC_027384(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Halomo_phiHAP_1_NC_010342(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Pseudo_MP29_NC_011613(1),PHAGE_Vibrio_VpKK5_NC_026610(1),PHAGE_Vibrio_VvAW1_NC_020488(1),PHAGE_Strept_phiARI0460_1_NC_031913(1),PHAGE_Erwini_vB_EamM_Huxley_NC_031127(1),PHAGE_Rhodob_RcTitan_NC_029097(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Pseudo_73_NC_007806(1),PHAGE_Liston_phiHSIC_NC_006953(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Pseudo_M6_NC_007809(1) 6 15.55% 53.04%