gi|00000000|ref|NC_008526.1|  Lactobacillus paracasei ATCC 334 chromosome, complete genome. 2895264, gc%: 46.62%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
497885..498814                     PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; LSEI_0480; phage(gi229605000)     2.27e-100           LactobacillusparacaseiATCC334MVTAADNITGLIGNTPLLKLNRVVPEDAADVYVKLEFFNPGGSVKDRIALAMIEDAEYKGVLKPGGTIVEPTSGNTGIGLALVAAAKGYHLIITMPETMSVERRALMRGYGAELILTPGADGMPGAIKKAQALSKENGYFLPMQFQNPANPDVHERTTGQEIIRSFDGGTPDAFVAGVGTGGTLTGVGRALRKINPQVQIYALEAAESPMLKEGHGGKHKIQGISAGFIPDVLDTNLYQDIIEVTSDQAIDMARHVSHEEGFLPGISAGANIFGAIEIAKKLGKGKSVVTVAPDNGERYLSTDLFKFED
complement(499004..499246)         hypothetical protein; LSEI_0481                                                      N/A                 LactobacillusparacaseiATCC334MIFIYGLGFALLSGWHVDVLSELSEEIEKDLFVWKNFSSSTWNIMIMSATASLVYTWRLLQKEPKIQAVIFKGTHLDRHD
499316..499591                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_0482; phage(gi48697273)     1.02e-09            LactobacillusparacaseiATCC334MTNTAIRYTPEFKQTLIDLHEKGHSFKELHEEYGPSLDTIRKWVQAATVIAIDHQGTAVTNEQFKQLQKENRRLREELDILKRAAVLLAKR
499621..500451                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_0483; phage(gi48697274)     2.16e-31            LactobacillusparacaseiATCC334MIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINQKWVYLATAYDPKARKVLAWQVGQQMTQDLAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLEQINYESILDVTESIARYNTFYNHDRETNGRGARKRKSAAA
complement(500570..500938)         hypothetical protein; LSEI_0484                                                      N/A                 LactobacillusparacaseiATCC334MSQIILLIAALFFFTRHVFRFERISRLTLVIIPAYTLVTGILLVSHKRPTFLALGVTILIGAILGWFQTTGLKIHVSQKHDVNGLPIIEIRHGWQYLVGWMARMSMVRTKIVRFCRMRMVVT
501060..501131                     tRNA                                                                                 N/A                 GTCTCCATGGTGCAACGGATAGCATAATGGTCCTCGAAACCACAGATCCGGGTTCGAATCCCGGTGGAGGCA
501215..501226                     attL                                                                                 N/A                 ACTTTGTTTTTA
complement(501259..502428)         PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0486; phage(gi971747651)      2.75e-81            LactobacillusparacaseiATCC334MATFRKRGKYWEYRVKYTDSAGKQLVASHGGYRLKSSAQDAAEAVEDDLKRGGDPSKQDVLLLDYWDQWAEAYRINGKSINTVYRYKLFRKHLKSRFDGRKLNSIRPIEWQKFINDFAAGKDRKEKTTRKRPRERSKDIVTKMNSYVRGMVKAAINERILFSDFTFGTKTSGVRSSGKVKVLDSRDFAKVKAIAIERASYRNIGALAVYIGSMTGMRISEVLALTWPDIDTKLCVIHVTRSWDHLYGTGFKPTKTDSSVRDIEISPSVIELLNKIHQEQAASYLRTGYRDEDQMIMRDPRHNVITDSACNKALHVIQNKAGIPEDKQITFHGLRHSHVSYLISKGVDIYYISKRLGHSDVTITMKVYGHLLDSQRKQEAHKAVLFMDQI
complement(502541..502801)         PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_0487; phage(gi195661240)     1.23e-13            LactobacillusparacaseiATCC334MKPITVISYKFGEKTWKNFEGEPIKKYEHSVLLDISDTEVFTDKEKTELNDKIVVPFSRIREKRFIKDIPLSNVNEALNKKKAGRK
502891..503511                     hypothetical protein; LSEI_0488                                                      N/A                 LactobacillusparacaseiATCC334MEMQQLILAGIPGFLTFIWLDKLDAIHFDLPARQADRTIALILISMLNAAGGLAIYQQIWGTVGHSFWSEFGLFVVTLILSVPLAFTYYFLIKLGNSCLIWIQEQFHVATVLPGSPLVEALKNKEYSEEKLVIIFDFNDKLISSGYANRLPGSDDPTQQIGLMTYGQDWTVKLAQKKYDESPQNSEQIIDFDRQLKIYIIGINPYS
complement(503495..503731)         hypothetical protein; LSEI_0489                                                      N/A                 LactobacillusparacaseiATCC334MLAGYKKPPAAVVEEQLDYVEEKKLQKDNSDKAKSLPDKKSGLFFDRNVQNRSIKLVHKDPVPPKPKMPDSASSKNKD
complement(503732..503839)         hypothetical protein; LSEI_0490                                                      N/A                 LactobacillusparacaseiATCC334MLKKIVAILLIVLLAGATTACASDQDDDQNVEQFN
complement(503924..504631)         PHAGE_Lister_A118_NC_003216: gp34; LSEI_0491; phage(gi16798817)                      3.91e-07            LactobacillusparacaseiATCC334MNLLPEDQVDAGQAYDGLGNSEIIDTAFENKIWQLSKFAALNQPVSVDIDGKVYAEIRQTKYFIGKIPNDKVKTFSALYLNDKVELWVSIHGGTYKQTSTRSDGSITVKTYRDPVTLKLIAEDQQPAKTLNNNSGEEWSEVGKKMYAAKRKPYCLNCKHQLKGERFCPNCGAKIIYPGEHQNGMPINSWEKVANGADKFSQSVDKTGKFFSDFGCAMTLGCTIPIIIIIILFGLI
complement(504790..505212)         PHAGE_Lactob_iLp84_NC_028783: toxin-antitoxin system; LSEI_0492; phage(gi971743093)     2.07e-26            LactobacillusparacaseiATCC334MNDHIEDLLNQVIDYAWDHNIGCSTIPLHEDQGPLVDTEARLIILNNKWPNANELPFQAAHECAHILNGDNGKLRYTNQYTKSRTENGANQRALSIIVPMYFADIPEESANIDQFMNDLAIPQWLEDSAVQCIERFYENY
complement(505205..505558)         PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_0493; phage(gi100029)        2.74e-23            LactobacillusparacaseiATCC334MSTYDRIKTLASNRGWSLQKLALKAGIGINSIYRWKKMTPSTENVQKVADVLQVSVDYLLGNTDNPNPDNEGSKPVDLSGTNIFTYQGQPVRQDDWEIIQAILERRNNSSKKRDRHE
505802..506050                     PHAGE_Lactob_CL2_NC_028835: transcriptional regulator; LSEI_0494; phage(gi971748039)     9.29e-51            LactobacillusparacaseiATCC334MVNVQLNWTANRNDWKGYLLHLNLSQLDIAKFLGISDQVMAILVKKMTDGQGLTANQIDKDRWKRAIEYVKYKQSQQKKMTV
506092..506292                     PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0495; phage(gi971747660)      9.29e-16            LactobacillusparacaseiATCC334MIKPIDAIRNELPVVTSKTLDLFESAVSQELQKRNPKATFQVSILGMAVLGLLVATRLEEVSDINN
complement(506263..507096)         hypothetical protein; LSEI_0496                                                      N/A                 LactobacillusparacaseiATCC334MSKPIDAVAVENISKILGEYTTGPKITKMFSLLGFFDYDLQRQTDNQWFKASTKWRRLDETIRHECNASHNSRPFFRAIQYIARPQDFISKPEEWGRLRYEINECLIFYGYCLDDSGRIASAKTATTFSEAQLRLKTLSARLTELNVHPLVMKFCNEQFLQGDYFHAIFEASKGVVNRIQQLSGIQKDGNSLVSTVFSDKQPILVIKGNMLATETDRDIYSGLRNLLRTVIFLYRNPKAHTPKIYDPSSVDDAVQAFVIMSAAQTMLDSVVNVRDFL
507157..507915                     PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_0497; phage(gi100031)        5.74e-54            LactobacillusparacaseiATCC334MKEGNALNEPQPIEQNGQRVLTTEQLAELYGTTVGVVQMNFKRNSNKFIEGKHFFKLEGEQLRAFKNEPTNCGFVGKNASALYLWTRRGAARHSKMLGTDQAWDMFDSLEENYFNPKTRLPQTPEEKLALTMEVATRTVKRIEKLDGRVTDLEEKALLAPGEYNYISKQVNRAVANYLDVHHCKLNAKQRSLFYRDINHGLNDYIGIKTRTQLRKKDFDKADDFIQNWTPSTATLMKAREISLLEDQQQEAI
507916..508095                     hypothetical protein; LSEI_0498                                                      N/A                 LactobacillusparacaseiATCC334MNERPKEKLTNVVKVQDKDVEDQVTGMVIDLLKQKGFTFANFESVVARVKSHYQNNATI
complement(508088..508339)         hypothetical protein; LSEI_0499                                                      N/A                 LactobacillusparacaseiATCC334MVQVPYYDNPGGALAVTVELPHAANVYLVDQANFNAHQRGDHFTYFGGHYDESPVTIRVSGAGRWYLIAENGSGEQYRYTWSK
508405..508761                     PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0500; phage(gi971747661)      3.16e-06            LactobacillusparacaseiATCC334MPLLQVVEDDQISSKKYLAVEEEELAKMIEENQELKRKLAARGMWTLTTATSYVEGHNNTWVVNNILNVPRFHKFLQDTVVSYPPPGKKGYLFHPKPWLDFLDKWFPEISRSLREKGK
508761..508853                     PHAGE_Lactob_iA2_NC_028830: hypothetical protein; LSEI_0501; phage(gi971747662)      2.92e-13            LactobacillusparacaseiATCC334MIGYLLIAGGFGVIVGHCLGHSGNWRKWIE
508846..509049                     hypothetical protein; LSEI_0502                                                      N/A                 LactobacillusparacaseiATCC334MNSPETKLNKKYSPIFGDGISVSANDVQMAVDGIVATLSRHTSNLAEAKAILDLIDLDQYAELKLIK
complement(509032..509577)         PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; LSEI_0503; phage(gi100032)     3.57e-11            LactobacillusparacaseiATCC334MNKYELFSSVVQALTSIVAVVLSTIALIRSSKSERDANKPYTVSFLKVVRSSQTTIIYLMIKNFGRTGATILSVKADPAIDSGQLKFENNPFELFSNQLIAPDQTYAAVISVKNSEIELKTRKFSLSITYSDEFGKKETKDFLLNADVATSFDHITPVPTKTDEVAKSIYITSAERLFNQF
509758..509976                     hypothetical protein; LSEI_0504                                                      N/A                 LactobacillusparacaseiATCC334MAREIGKQLDRLESLAYKVRTDQYLLDYLREWAETKCDLFRDDDPHMTDGEKIQDRLFLKDNFKKYMDILGP
complement(509992..510651)         PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_0505; phage(gi9635740)             6.72e-34            LactobacillusparacaseiATCC334MVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
511011..511127                     hypothetical protein; LSEI_0506                                                      N/A                 LactobacillusparacaseiATCC334MQSRGQTSLDMIKFEADLMDVRQNIADQCFHEGGVDHE
511120..511866                     PHAGE_Lactob_iA2_NC_028830: DnaD domain-containing protein; LSEI_0507; phage(gi971747668)     5.06e-44            LactobacillusparacaseiATCC334MNEKPGYYAIIPAGVRYDKQLPQGAKLLYGEITALTNKNGYCWASNDYFAKLYSVSIGTIKSWLKCLEDNSYIRRVIKYKSGSKEVEQRFISLAPRSENLPPSVRKLTHPRSENCPENNTSINNTTTLGEPELINFWEKNGFGFISPKNREDLIYWVDDFKKIGSTDEQAVQVVKQAMSNAIDNNVRRYSYVNAILKNWESLRLTSLEAVTAYEAQRTQRQKSKSTSRQASTDVYQNQGDVQDEDLPW
511881..512705                     PHAGE_Lactob_iA2_NC_028830: DNA replication protein; LSEI_0508; phage(gi971747669)     2.03e-154           LactobacillusparacaseiATCC334MSNLETNQGRLAAIETFAERCPDCGSLLYRPKGLSKVTGKKMAGVCMNCGYKQPPTEPKNVTPDMEKEARKNRTVGYYLAYSVFSTDAIIAKDFNNFHTDGSLGQQQLKLFAVGLSNKICRNEVVHALIIGDTGVGKSHIANGILIDTQAKTGYRKTCLFIDWNALMQRLKSGMSANAQDVRMKNEKIMHEIGKADVVVIDDLGSERGSDFDRQTADDVFRMREDKATIVTTNLHGQDLNKRYGERTMSRMAKHGQGNSFGVKGILDQRKEALP
512705..513223                     DNA polymerase III subunit epsilon-like 3'-5' exonuclease; LSEI_0509                 N/A                 LactobacillusparacaseiATCC334MKEYVIMDTEFNSTSNRAIQISAVRIRDGLHIADQFNRFIPSPDKFDQLHIIRTSNMRYSDYLALPSLQQTVRDYVAWMRTTIDIVGWSIEGDAGRIRETFKKGSHGIPKNWKFIDIADIVEKRYSFNATPPLQGLANVLGIPVNRTHNALDDCLRTFGVIKALESRDGKLF
513270..513692                     PHAGE_Entero_EFC_1_NC_025453: replication terminator protein; LSEI_0510; phage(gi725950528)     6.84e-21            LactobacillusparacaseiATCC334MDKLNLNLNELADGAIKEKLTKALAQVANNILDPNTDQSKARKVTIALNFKPDDSGVVKLTTDVKTTLIPDISVTTNVLLGRGEDGYMEMNELKSGTRGQEYFDPDDSTLKDDKGIPIKDDKVTDAPIDFRKIKNAKEAN
513694..514431                     PHAGE_Entero_EFC_1_NC_025453: hypothetical protein; LSEI_0511; phage(gi725950529)     3.56e-61            LactobacillusparacaseiATCC334MTTEADALKFTAEQAVTANGKRIIETKNRQFLINGNGDIREFRPNDGANEALQVHTLTAVVDYIGKVSERSASPLIVQVVDENSVFVLGELDDFGNREVLIKAKAMHPCYPYGQWLDSESFIIALQAQFMTTEDGKVLLKFVGNLKDESAQTMVDDGVSQVATARSGVASVGKVVVPNPISLRPYRTFLEVEQQESDFVFRMHEGPKLALFSADGDAWRNTAIDLVAEYLSEKLVKFSKHVTVLA
514443..514730                     PHAGE_Lactob_A2_NC_004112: hypothetical protein; LSEI_0512; phage(gi22296571)        5.27e-50            LactobacillusparacaseiATCC334MANKVERESNSTPLTKKQKSCQYCQEPHKPIEAEDGSFLRIGMSGGNCWDGVHPEKINGAAIHTCTAVGFDNAEVDEPIAINYCPMCGRRLEAKQ
514800..515132                     hypothetical protein; LSEI_0513                                                      N/A                 LactobacillusparacaseiATCC334MNSLLIKLLICAVITVVICAYFFWLLFDHFVSNRRSKTVQIGSTVFIVRIGKKQYVSYFSKCSKEFNTSSEIDSSKLFVLRHDAEAAAEVSGGIVLTLPINIDDPNELKY
515647..516090                     PHAGE_Lactob_PLE3_NC_031125: recombination endonuclease subunit; LSEI_0514; phage(gi100056)     6.05e-104           LactobacillusparacaseiATCC334MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIVLRSPVMDGMPKSPSYGNKAEDKLVSHADELYYIACCEGAIESIENEDYRIILVESYLTPKTTRKSSLQLAAHLHVDRTTLWRQTQEALYAFAEICPLVKLDATSVQQ
516604..517257                     hypothetical protein; LSEI_0515                                                      N/A                 LactobacillusparacaseiATCC334MSFISGFLTKDFCSIVANGRMSQGAKTVGENYKKFMLAESNILIATTGNAQVADIIKDFIKRLHVQSNGAQLNWQLYVNVIQQFVKETLKEAKDIDGNCVNQIVVICGVNGNKIMALAFGQTDAGYIQREYLPGENEQKFFTMTPPGVNPDAVTKEFISITNKIEIRTYSDIVIVQSKLQDYVAEIDSGKSVNTHKMGMGARIDGINGRFKEWSSGN
517508..518506                     PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; LSEI_0516; phage(gi588498272)     6.87e-70            LactobacillusparacaseiATCC334MSPYTHLTLKDRESILLGISTGKTLDTIAKEIGRSKSTVSREIARNGGWRSYSAATSQDRYRRVRLASRRPRILDRPGTRDAVIRYITVLHWSPEQIAGRLSLEGSPIRISYSTIYRGIYLDNLGVPLKSHGARGLPRLLRHRGKTRKIKGTINERRGRFNDVPSIHDRPRSAENRSWFGHWEGDTVRGKTGHSALVTLVDRKSRYLLSKRTANAKADTVRDVMIELLGALPANRVRTVTPDRGREFARYRELAERLNTKVFFPDPHAPQQRGTNENTNGLIREYFPKNTDLDLQSDQEIETYIEQLNNRPRKVLGWKTSSEVFMGKKLHLS
complement(518702..518920)         PHAGE_Lactob_LF1_NC_019486: hypothetical protein; LSEI_0517; phage(gi418489439)      9.25e-13            LactobacillusparacaseiATCC334MSLDGKVDSTKDKISGKAKEVEGKVTGDKARETQGKAEGILGKAKEKLDDAKDAVKDTVDDVKSKLSTDKKD
519343..520173                     PHAGE_Lactob_PL_1_NC_022757: hypothetical protein; LSEI_0518; phage(gi557308044)     0.0                 LactobacillusparacaseiATCC334MQWTDEQIGDIRKLASEGFTRRETADKLGISYDALQGKARRLRIEFQKPLKNEYDSDGTNRETPSADRKVALNADGSQTVTALMRLKHEPNKDPRTLMELCGYDPDKFEMVLGDYKVYEQHSTEDGTVPQYSIHIRVKPKQGLSINEMAEAFNDKIIPVNYGMKKSGDRNLVIPLPDLHFGWTTFADLKDMVSQLREIIMDGYNEIVIEQLGDLFHSDQIHVTQTVRGTQLDHANMRQAFHDAVKLFDQIIPLAIEYSNHVSMTAIWQPTGAVHTC
520188..520466                     PHAGE_Lactob_CL2_NC_028835: GcrA cell cycle regulator; LSEI_0519; phage(gi971748068)     2.89e-61            LactobacillusparacaseiATCC334MLAHGDVAKNKLTGLFPFEYKKIFNMAKTYELHSGHYHSERFKDDRGIMWRQLGTAKPNDPYEIKNGFTTGKHLLYAFVYDDTRLRCTYELN
520453..520788                     PHAGE_Lactob_iLp1308_NC_028911: ribonucleoside-diphosphate reductase; LSEI_0520; phage(gi971754965)     6.32e-69            LactobacillusparacaseiATCC334MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQTITADADDYERFRKLGYRSMPVVTIYEADGTHDEWCDLRVDKIKQYTEGNI
520785..520895                     hypothetical protein; LSEI_0521                                                      N/A                 LactobacillusparacaseiATCC334MNGKLIYLVDKDEYIFITTINWQECQWLLCCNYGQK
522131..522406                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_0523; phage(gi48697273)     1.02e-09            LactobacillusparacaseiATCC334MTNTAIRYTPEFKQTLIDLHEKGHSFKELHEEYGPSLDTIRKWVQAATVIAIDHQGTAVTNEQFKQLQKENRRLREELDILKRAAVLLAKR
522436..523266                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_0524; phage(gi48697274)     6.21e-31            LactobacillusparacaseiATCC334MIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINQKWVYLATAYDPKARKVLAWQVGQQMTQDFAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLEQINYESILDVTESIARYNTFYNHDRETNGRGACKRKSAAA
523581..523739                     hypothetical protein; LSEI_0525                                                      N/A                 LactobacillusparacaseiATCC334MLWLIFKCSFWVLLGFIFLCELAAIRISGLCSRKEERQEALEKHRQQAKSAP
523828..524226                     hypothetical protein; LSEI_0526                                                      N/A                 LactobacillusparacaseiATCC334MPLLGNVVRFHEAALANAKIMNAKCQLIAGVFCAKERRLNMAESVGIWLHDRNLKLISKDRDALSYRIQASWVKDHTDYPIKPGMTVVIGNIKPPNQLKNVLVLKVGSAELKRDGSLVISGERIKSVPKNLI
524238..524504                     hypothetical protein; LSEI_0527                                                      N/A                 LactobacillusparacaseiATCC334MFNLVLQTKDIKEAKRKNGLLEIRFPHPKEKALMLKLRHAVLSIETGWPILPDTTCIGEIVRVLPSKDRVIVAYVRPQNGFQRFVESH
524523..524699                     hypothetical protein; LSEI_0528                                                      N/A                 LactobacillusparacaseiATCC334MAISKAQMNNQKQMLTEILKQQNLAYEDWLYQRMTDEIESHRKLILQALKNLNMKEGH
524701..524928                     hypothetical protein; LSEI_0529                                                      N/A                 LactobacillusparacaseiATCC334MQGKVIALLSAILGFIIAIAGGYAAVKFGLMGIAHMTKDQQKIREARDGMTNVAIGLIVVIFASAAVAWLQGLAG
524971..526212                     hypothetical protein; LSEI_0530                                                      N/A                 LactobacillusparacaseiATCC334MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDHAYQTVLSDQSPEAFKAFSDRVRQELTIEEQPKAVQETLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSKPVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKHRDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDADLTAVRKVKLAISYIYQNQPENALTINSEIKSPQLQQLIFLALIHEGKLDQAATLAKSMNNKDADKVLEVGKTYQAAYEKAKADANNSKLSETDRKQALKDQHNWLALRKSLGGKSPYEESTNE
526190..527758                     PHAGE_Achole_L2_NC_001447: envelope protein; LSEI_0531; phage(gi9626524)             2.75e-05            LactobacillusparacaseiATCC334MKNQQTNNKKRHIIITTTAVALLGAGGLWAATQAHSDQQATHTSSYQKKMQKPKASKGSQAKKEKGKNTVNDIIDQALGESSTSTSNEDHAFKSATNNILDSDPIATIAKALDTPAAKASLAAATAVVEPPKALNDNSDDTASVKPLTNDTTDTSQTDQGKTNDGGKTPTPVNPVEPVDPDKPVNPITPVNPDNPDNPVNPVDPVNPVNPVNPVQPDQNTAPVLNVPEDQTVSLSHSGTFDKLNGVTASDKEDGDLTKAIKVTGNVDLSKEGTYTLTYSVTDSAGQTTSAKRVITVANDLPVISADDQTIEVGTSFDPLTNVTASDVQDGDLTRDVKVTGNVDTTKLGTYQLTYSVSDHDGGQTTKTINITVYAKDASFSGLDALTVQQGSTPDLRKGVSVSDPYSATPSDFTVTACDTKTLGQKSVTYSYVDKWGHVTTKDRVINVVAEKTVFKELQDQTIKQGDHFDPMTGVSATSTNGPVTISYVGEVNTQKAGRYTLTYTATDQNGQQAEQTIVVTVE
534247..534258                     attR                                                                                 N/A                 ACTTTGTTTTTA

#### region 2 ####
1902327..1902578                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_1906; phage(gi48697273)     2.77e-53            LactobacillusparacaseiATCC334MPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
1902718..1903473                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_1907; phage(gi48697274)     0.0                 LactobacillusparacaseiATCC334MKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
1903845..1903871                   attL                                                                                 N/A                 TACCGGTCATTCCCACTCAATCGTTGC
complement(1904004..1904228)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1908; phage(gi100024)        2.13e-42            LactobacillusparacaseiATCC334MVEKIDKSRVIEQSYVRRDLMAAVSELLDSASDKHSTDELIDAVASVQSVTMALEHKSAVCGPSGLRGWDGEEY
complement(1904273..1905571)       PHAGE_Lactob_Lrm1_NC_011104: lysin; LSEI_1909; phage(gi195661219)                    0.0                 LactobacillusparacaseiATCC334MKLKTKLITLVVAFLAAISFALPSQVNAAKGDQGVDWSRYQGDNGVFGYSTDKFGISQIGGYSGYGTYEQTTYKTQVASLIAAGKRAHTYIWWQNIDNTNLAKQVLDHFLPEIQTPKGSIVALDYEAGSTNTATLLWALDYIRDAGYTPMLYGYKSFLMSHIDLSQIASRYQLWLAEYPDYNVTTVPNYGYFPSFDNVGIFQFTSTYRAGGLDGNVDLTGITDAGYNGSTTTDSGKTYVKPSTSTPATNAGQQANNTTLSQIKAGDSVKVDFGTTRWANGVAMPSWVQGKTYTVQQVSGSNVLLGGIMSWINRSNVELLTTTSVSSVSSGSTYTVQSGDSWWYIAYKYGISMYTLASNNGKSIYSVIHPGDVLRVSGGYSAAVSSHTYYTVRYGDSFWSIAYKYGISMYTLAANNGKSIYSLIYPGESLYIR
complement(1905582..1906028)       PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; LSEI_1910; phage(gi100022)        1.34e-77            LactobacillusparacaseiATCC334MNNLTELLVSLAVAAIPIIGAWISKQLLANKQALTLVKVLGPLANTAVTAAEQLGVTQAIDGAVKKSTAIQAVKDGLKSLGFTSADEQTIANAVEQSYADLKDSLAETYPQKTVDQETSNQDKVAAAAQAAADAVKAQLSPSSVAPQQ
complement(1906021..1906311)       PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_1911; phage(gi195661217)     1.38e-61            LactobacillusparacaseiATCC334MTFFGYTIGDWAEFISIIGVGVSAGSWLFKKIALDPLRSDIQVLSETINRQLKLHGQSLADLGQHLRTHDDELGSHSVRITRLEDHVGIKGDNDDE
complement(1906374..1906529)       PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LSEI_1912; phage(gi226377755)     1.03e-14            LactobacillusparacaseiATCC334MLDKKFSALSALYAANVIDGGRTIDEVPAIIRPQVQEILDDSKKEDAAPQA
complement(1906544..1906879)       PHAGE_Lactob_iLp1308_NC_028911: hypothetical protein; LSEI_1913; phage(gi971754934)     7.99e-23            LactobacillusparacaseiATCC334METKNPIKALFSLNDGGYITGFQTEFWDGKTWQTTFDTSKAVEVDPAELNKIVFGATKYAGGKLVIDKDKRAELENNQPKPEPTATELKEQYDQLQAALLELADLSLDTKK
complement(1906891..1910940)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1914; phage(gi100019)        0.0                 LactobacillusparacaseiATCC334MKDFYFVDRSWHLLGTATAGGSGTIHIVDDTDDQLISAGARTYSGTILFTPELSSKVQMMAARGNYILYMDERNKAVFMTIMESSHDPLAGEETFTAEDAGIDLINETVGPYKAPQAMGIADYISLFTNDSGFEIGLNEIPNLKRTLEWTGESDTTLNRILSVATQFDNAELDFSFDVSGTTVVRRVINIHKRIGADRNITLYVDKDINKIVTSGSIYDLYTAVTPTGGTPESKDGETTDQQPITLEGYQWTDPDGRYVLTKEGVLLDPVANQTWSRLLAKGSAPSVNAAYINRVVTYTATSQATLLQSALSDLKTHNHEAVNYETDIAVLPQNINIGDTIHLADENEQLYLSARLLELKSSYSMDTHTATLGDYLIEHDQVAAQYRQLAEQIKNIPKTIQYYPWLRYADDNQGTNMSALPAGKKYMAVVYSNKSSVPSDDPADYAGKWALIQGPKGDDGVGVPGPKGADGKTSYFHTAWANDVSGQSGFTVSGGDGKKYIGTYSDFTQADSTNSSDYNWALFKGEDGDVGPKGDQGLPGAKGADGRTAYTHFAYANSQDGKTDFSTTDSNRTYIGFYSDFTSGDSTNPSEYSWSLIKGADGANGKDGVPGKAGADGKTSYFHIAYADSSDGKTNFSLDTPGSRKYIGSYTDFTQADSTNPAVYSWQLVQGPKGDTGKDGVAGKDGVGIKSTQIMYAQSTSGTTAPTTGWTAQVPTLIKGQYLWTQTTWLYTDNTGEAGYTVSYNAKDGNTGANGIAGKDGVGIKTTVIEYAVSLNGVTKPSTGWSATIPSIAPGQFMWTRTTWLYTDGTNEVGYSVAQAGATGPKGDTGAQGLQGLQGPKGDQGIKGPAGADGKSSYTHIAYGTSNSGAGFTQTPSTSTTYIGMYVDQTATDSTDPAKYAWSLIKGADGAQGTPGKAGEDGKTSYFHIAYADSSDGRTNFSLDTPGSRKYIGSYTDFTQADSTNPAVYSWQLVQGPKGDTGVGIPGPKGADGKTSYFHTAYANSIDGKQGFSTTDGNGKSYFGQYVDQTQADSTDPTKYSWALFKGTDGRDGKDGSDNVPVITVGAAYPSGPKKGDMHWLTDSSGVVTGYYTYDGTKWNPYKIDAKILSAETFNGLTFNGVTFNGSRFITPFNGHPKTTGGEEDPLQWTRGIISVGDGEVKMTTTSSKTQNGEATATGLVEMKTGVIYSSQQIANSKEQFEAMLSPGQLFLSHTANNGSVVSGYIDTELVNELNARGRVIWQGGFYPAGNDTIIPSMKLSQTLTGWLVMWSRYENGVIRNNDYAYSIIPRGLVVYQNLGSNHFRVMATMAGHGTFSKTFWLADDRIIGDDDNKQGNAAFAVINNVFAI
complement(1910937..1912904)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1915; phage(gi100018)        0.0                 LactobacillusparacaseiATCC334MYDFRETTPFTGSDDNQHPAEAMLIDGQYIEDLIPGYSTLQVSGRELLSQSIEKQTIGKSDGEFIQYARNPSREIVVGYRLSAADNLSFRQAFYKLNSILHGDSHQVSFNDDPSKYWLATLSDIDDVPKGRNAITSSFTLFVPDGIAHSVATQTADNMPYKDVPVNLLTGTSNQETSATVYPNQWNATSQNPNISVTPGQKFVYTIFITNDNTVDLAAGVDAASEKTWKAAYWGNIIKAGTSGYSSVTFTIPSGVDNISANAAKLLTLVPSSKTTVYWKEEKLNVGITASPWSPNPADPEYYSDTITVPNAGTYPSEPVITATINGDDGVLTAINDQGSVLQFGSPDETDGFVKQKSERVYHLDFNQTPTGVTLNNGVTAFPYYEHGNNANVQSGPFGYKDGIAYPSTERTAGNFWNGPSISGTIPKNSNGSNTANFQFVNGVNVGTNAAEVGRFEFNLTYQGKIVASLALFDDSASNDQWVFSGTVYDGRQAQMIFWDLLPRNYYRDGNYNAVITKMGDQLTFRLDRIDLGDGGIETRTISGFSSVPIDGWTAWFPGFSDQRGWSINWQDSYFEWINVDYWDDIPNRFKDGDVVQIDVANRRVLVNGAEDRTLQTIGNDWGGFKIQPGNNTIELLTSSWAKQCKAEISWQEAWL
complement(1912976..1913992)       PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_1916; phage(gi9635740)             1.59e-43            LactobacillusparacaseiATCC334MTHSQTNTHKHYQQLSFSDRATIQALQAAGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAMHDRKRDRTGHYAFLKTGRAFFKALSRELTRKPRVHSVDSFVHFYRDQGKACPSTTTVYRYIDAGLLELDNMTLPKKLRRRIKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRLADEPALMTLTERYSRTEIIVKIPDYHAGTCLKALQDTIDDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENANGLLREFFPKGKSLRAITLVEIQAVQSALNHRPRRILNYLRPCDYYRCMA
complement(1914099..1917434)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1917; phage(gi100017)        0.0                 LactobacillusparacaseiATCC334MADSYSVEAILSAVDKNFSGTFENMSSVANSAVDSISSGLASLGKYTAIAGAAVTAMGVQSLKSFGTFEASLNKAAVVAGGTSKNIGELADVANKMGAELPLSAQDAADAMVQMAQDGANLDTIKDEFPAIAKAATAAGSDLQATAGTVQVAMNIWGDSIGSSAQAAAVLTQTANVSNASIEEMQQAFADVGSIASQVGINMQDTSTAIGMISNSGVPAAQAAQDLNYALTRIIKPSKQASDMASSLGISYYDAQGKMKPLQTILLDVAKATSGLNDQQKQLALTTMFGTAGFKAMGPLLRSVTNNSDNASQSWTAMSKAINDASSSAQAANAVLNQQASDMQNNIGSKIEQVGGNWEALRNTAMQANSGINSSILNMVNNVLTMANDSNSSLGQMAQSFIGLSTVIGPAMTGFAGFAAQANAVHNFLGLGSKDASGFSKALSGLTDTSKVSTAFDGMNSKVRGFVSATESAPKGISNFVSALKGVEQVGPKGFDSLGTSMQKIVGFTANASTHVKEFNGGIGSLASSVASKFPSMSASVSSFSSTFKNGLSLSAIGNPFGELPSMISNSLSSMTSIVSSKLAPLSGLFSTLGNGISSGLSTSFDLGTSIVSNGMTAMAGVMKMGLSVIGPAAIIATLIAGLGVVNNQFGTQIQAMLQTATTQGPQVITNFVNGIVSAIPQLIASGESLITSLLNAITANLPAIITGGVQIITTLVTSLTSGGGSANMLNAAITMITTLVTGLVGALPQLMSAGINLLMALINAIVQNLPMLINAAMQMIQTIATGLLQNMDQIINGALQIVNGLVDGISQNLPAILNAALEIIMAIVGGLVQHIDQLIAAALQLITALANALIANLPMIIDAAIQLVMALMNGLIDNIDQIINAGIQLLLALVNALLDHLPELVNAAIQLVVALAGALIDNLPKILAAGWKLVSGLAKAIWNHRDDLVDAGGQLIMGLVKGIGNLAAKAWNAAVSVAKGIVKKVKGALGIHSPSKVMAQEVGQYIPAGVAVGITDNMKPITKAVDAMTAATSMSIPAVDTSAFSSSVSALNSNVQGATLASNLDVNYTRKQTIEVPLYIDGREVARATANPMQTELSRMTRMSNRRKGLF
complement(1917427..1917780)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1918; phage(gi100016)        4.35e-82            LactobacillusparacaseiATCC334MTLVEYELRMEAYQLKQVDRQNEIAQQAWMNQQVQATTGSKNPKPKFKAFDDFFDKKEIVDKVRSSYEPDYEISLMSKTELKHSRAQIFAKRMAEFQRLKREGKIIPLSERKEGAHG
complement(1917879..1918214)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1919; phage(gi100015)        1.30e-75            LactobacillusparacaseiATCC334MQLTINGKEYELNFGVRFVRELDKTIGASIKGINFGMGVAKALVGLGSYDSAVLSDVIYAATAVSKKRPSTKEVDDFIDEDGTDLDSLFKQIPEEMRSANAVKAATKNMKA
complement(1918301..1918933)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1920; phage(gi100014)        3.48e-128           LactobacillusparacaseiATCC334MANELKVLEGMDVVALARKHSDQATVSGQVIPWQTSLSFDPSVDSDSTVTKDGNVATRSSASTDLEVEFLNNTAAIADVMYDSLFDGELLDFWILYRKRKNSAGKYYAWYMQVTVQEDSSDNDPDDHSTRDVTFSVNGTPKRGWTTLDDETQEQVDYVFLGVGKVTDTDKTGGGTVWDKDVDPGTNTADTAPAQSSSGTAPAQGGSSTGA
complement(1918945..1919349)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1921; phage(gi100013)        9.59e-96            LactobacillusparacaseiATCC334MIQITSPEQELYDYFYAFSQSSGYKTYDHLPMQQENAPYPFVIVGDIQVVPTATKTSLNGNVLITIDIWGDKKQRFTISDMAERFFRAAIGQVLTDDYRFYGRVEDQSKEFTQDQSVPDTVLNRATLILNLNIL
complement(1919350..1919715)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1922; phage(gi100012)        1.13e-82            LactobacillusparacaseiATCC334MSKASISYNMQIKGMDKLVAGLLKRAKMDVVKQIVKQQTAQLQTRAQQMTGTVYAHPTGATKRGIKLSLEAGGLTGIVSMSMEYNPYTENGTRFMRARPVLKPAFLYQKIQFINQLKQAAK
complement(1919712..1920014)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1923; phage(gi100011)        1.21e-66            LactobacillusparacaseiATCC334MRLDHEITFWTDDEEYNPKTHEYGEPKEVASAAGSVTDMGTDKSVQLFGNYAQKAKVIRLAEPISVNWSYLTIDDEATHYALNTDRVPLQNATLIVGETK
complement(1920019..1920393)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1924; phage(gi100010)        3.83e-80            LactobacillusparacaseiATCC334MANANPVTLADLKTMMEIKTDTQDDVLNLIIKNTTQALRFKLGLRTDEAFPSELAYIALEVCVRRYNRRKNEGMTSYEQEGQSFTFKSNDFDDFADDINDWKEANEKNAKSFGTVSFISGYPKR
complement(1920729..1921748)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1925; phage(gi100007)        0.0                 LactobacillusparacaseiATCC334MPAILDLFNQKTVLDYVQNRQYPQLLGDTLFPSVKIDQLDFEYLRGGSKTPIIASVSAFDTEAEIGSREASVQAAELGYIKRKMQLKEKDLIALRNPRTPAEQNYLTSLVYNDLDVLVQGVYARVEKMRMEALATGTISIDENNMNFGVTYNVPAEHQVTAATSWDADGADPIKDLQDWFALLDYAPTRILTSSKVQTALIRSKAFADYFKTAGLLPSVGSLNAVLQSFGLPTIVTYDAKYRKQGANGIYTVERYFPEDTLVAFGDDQLGQTVYGPTPEESRLIATPGVQQGTVGNVFTTVYETTQDPIATWEKAAATALPSFPEAENVLQAKVLIPKP
1921841..1922116                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; LSEI_1926; phage(gi48697273)     1.02e-09            LactobacillusparacaseiATCC334MTNTAIRYTPEFKQTLIDLHEKGHSFKELHEEYGPSLDTIRKWVQAATVIAIDHQGTAVTNEQFKQLQKENRRLREELDILKRAAVLLAKR
1922146..1922976                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LSEI_1927; phage(gi48697274)     1.80e-31            LactobacillusparacaseiATCC334MIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINQKWVYLATAYDPKARKVLAWQVGQQMTQDLAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLEQINYESILDVTESIARYNTFYNHDRETNGRGACKRKSAAA
complement(1922962..1923465)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1928; phage(gi100006)        8.80e-61            LactobacillusparacaseiATCC334MYAGKKVTASEINFLDSEKFVSFTRQVDSSTDGVVKGVLPAGSIYPKNDATAVGVTINDVDVSEGSQPVGVIVEGYVNAARLPVKPSTNAITALKEIKFSHGQECQWSGQKLSGSAECVWLSLKFTHYQIFYQRLILFNVQERLQTSPGIWSFPRAVRLLKGYLCSC
complement(1923478..1924116)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1929; phage(gi100005)        2.95e-148           LactobacillusparacaseiATCC334MIPKILMPMNLQFFAEDTGADGSQENQQNGESQSDNDTNDQDSENGQDSSDESSDQHTYTDEEVNDIVKKRLARAEKEKQAAVDEAAKLAKMNADQKKDYELEKAQKERDELKSQLATYEMGKQARSMFEDAKLTVTEDDLQHVVTPEAESTEANVKWLIAHDQAVAEGVRQELLKGSTPKTHGSKVETPGAAFAKQRNQQGQVVNDPWKQK
complement(1924234..1924764)       hypothetical protein; LSEI_1930                                                      N/A                 LactobacillusparacaseiATCC334MNSEDLKTREDIKKRLLDLAALANGIKDYQLGALILTAYNRCDDNVTVQNGILYVNGKPMIIDNATLANYMGLSLTGDTKSTSGNVSGPHLSFIELKDDGPYLNGKRIEGVIDMNIDSKVGDHTKVVIKLAANVHGIDDIDKGYSFFGETLAEKAASIKHEIDKQSRREQRRKGFL
complement(1924761..1925087)       PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; LSEI_1931; phage(gi100030)     1.49e-06            LactobacillusparacaseiATCC334MKLPEKVLIDDIEYKVEAVSHKELQLSSEDLKGDYWGETCYKQAIIRICEGMADDEVKITLVHEIIHAILQERGFDRQNNDEAMVDGLAHALRMLAKQNPELIREVLS
complement(1925097..1926095)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1932; phage(gi100004)        0.0                 LactobacillusparacaseiATCC334MTTTTQQQIASNSAYWNKRTAAERKWIVENLKNDEAFNARIQEYFDKALNNIQKDIDSELAKYAAYSNDSMAGARQAVMATDIKAYQAEAKSIVDDARKMYNGGPLKYSDFSKDVNDRLKLYNATMRINRLEMLKSEIGQEMLDAHMKVNADLISKLSDDYQSEIKRQAGILGETVSKGGYTDLAKLLSKREGDYTFSQRIWINQDILKAELDELLTAATIQGQSPLKIARKLRGQVAETVNNHRYVTERIARTESARIQTQAQLDSFHKFDYQYCKWVAEPSACAVCKEISEGGRSGRGIYRVDNVPDIPVHPNCRCSIAAYAPDDESDDD
complement(1926061..1927488)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1933; phage(gi100003)        0.0                 LactobacillusparacaseiATCC334MAIILTVQGKGSITDGDVFIFPTDEELTGDDINAFITANDDLVKNKYLPAKKMYLGQHQIIDDAKKDHGPDNRLVGNLAHYIVDTYNGFYIGIPPKITLDNTQDNTVLQEWNDTNSVQDKLSEISKQATIYGRALAFLYQDEDSKTCIAYSSPINSFIVYDDTVAHKAVAFVMYWHDEDKTLAGKVYLRDGIYGLDMTRLEGTDGFNPFNEVPAVEFFMNTERQGIFENVETLINALDKVLSQKANQNEYFDNAYLVLKGLKLDEDDDGNPKLDLNGNQIIYAPDADSAQGVAEFLTKPDGDAIQEHLIDRLISMIYQISMVANLNDEAFSGNSSGVALQYKLLPMRNLAANQDRKFTQSLRSLYKIAFSVGTILPESKSDDWQKLNFAFSRNLPENITDEADAASKLKGLVSDQTMLSTLSFVDDPKAEMQRIADETAQKAKDAAANSPSSPDFQKLLNGGGNDDNNDSTTDSE
complement(1927493..1928746)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1934; phage(gi100002)        0.0                 LactobacillusparacaseiATCC334MTTPIDQFKGKQLDIINWWRRYPDKQTIIADGAVRSGKTFAMSISYVLWSMIVFDREQFGIAGKTIGSLRRNVIRPLKQTLQQVGFSVVDRRSENMLEISLDGRTNLYYLFGGKDESSQDLIQGITLAGMFFDEAALMPQSFVNQATARVSVTGGKYWFNMNPEGPYHWFKTDWIDQADDKRALRLHFVMTDNPSLSDEVIDRYEHMYSGVFYQRYILGQWVLADGIVYDNFDKDEMVSNPSQQPSRYYVSVDYGTQNPTVFLLWGKCGSVWYCLKEYYYDGRHSSRQKTDDEYARDFSQFVGDIRCEVIVDPSAASFIVKLRERRYRVIKADNDVLNGIRETQTAMNSGEIKFTPGLTNLFKEFASYVWDDKASQKGEDKVVKAHDHAMDAMRYFVMQVIKRRNAAHTFKNTSKYF
complement(1928730..1929302)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1935; phage(gi100001)        4.73e-129           LactobacillusparacaseiATCC334MRLTAKQKKFVDSYIADSNATKAALEAGYSKRTARFVGAENLTKPNIKAAIDERMKRLESDKIAKAAEVLQYFTTVLRGEAKETIIVSTPDGADAVENEPSIKDRMAAGRELLKRYPGNDELLNAQLTKIITDIEKTKADVRKSKAEADIMEAKANAYRTPEGQDGGLNKLLAAIDESIPKGGDVNDNSD
complement(1929371..1929505)       hypothetical protein; LSEI_1936                                                      N/A                 LactobacillusparacaseiATCC334MAFHLPSPKDVYKNLKDKLKKQRDKTKADKKKQPSKENPGVTTA
complement(1929688..1930836)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1937; phage(gi100059)        0.0                 LactobacillusparacaseiATCC334MQWTDEQISDIRKLASEGFTRRETADKLGISYDALQGKARRLGIEFQKPLKNEYDSDGTQSSETILKVVRGHKMTPREVLEAHGYDYTKWELVRATSNFWKQTPDATLYQSKIQIRPLVEAEQYESLMNDIITHKEPYQAKAPIFVESDRYLVIPAFDTHFNGHTFDIYAESLKRQLEIIQRGHYAKILLILGGDLAHVDNINSTTAKGTQLETTDLGETVNEMEQYFETLIEAIIKNANECEVMYCAGNHDPSVGYMFARLLKRAYSNQPNITWDISLKHYKGAMLGHNFIGATHGDKGKNNYLAKYLDEFGFMLGTAQNRELFTGHLHSEMSKDLGGFVQRQVSTRKPTDQWTDDIGVVAHKTFELVEYSDHDTRAIYYV
1931030..1931251                   PHAGE_Strept_PH15_NC_010945: hypothetical protein; LSEI_1938; phage(gi190151424)     1.83e-06            LactobacillusparacaseiATCC334MGLTPRHDVPLKKRDWKYLDSLLKANIDKVPTSRKKAEIFLPDYEMKPDEIKAELKKNGYNYKDNANDSLQIF
complement(1931444..1932091)       hypothetical protein; LSEI_1939                                                      N/A                 LactobacillusparacaseiATCC334MSFISGFLTKDFCSIVADGRMSQGAKTVGENYKKFMLAESNILIATTGNAQVADIIKDFIKRLHVQSNGAQLNWKLYVNVIQQFVKETLKEAKDIDGNCVNQIVVICGVNGNKIMALAFGQTDAGYIQREYLPEENEQKFFTMTPPGVNPDAVTKEFISITNKIEIRTYSDIVIAQSKLQDYVAEIDSGKSVNTHKMGARIDGINGRFKEWSSGN
complement(1932400..1932828)       PHAGE_Lactob_PL_1_NC_022757: transcriptional regulator; LSEI_1940; phage(gi557308042)     8.95e-102           LactobacillusparacaseiATCC334MVRATRYFSPIDHDKTIENAKEVLGNYWHHKRLAQRTKIALRSPVMDDMPKSPSYGNKAEEKLVSHADELYYIACCEGAIESLDSANHRLILTSSYLTKRYSDQQIMDKLFLSKAQYYRTKREALIAFAEICPLVEIEMRPL
1933029..1933301                   hypothetical protein; LSEI_1941                                                      N/A                 LactobacillusparacaseiATCC334MIITLGSIYTLASRARQHPARFFDALNMSFCYNACGGQLLIFNFIYSQSYVWPPARRQSGVLFCVLSIFVFAILIKEAASIVAKFITYIS
complement(1933343..1933561)       PHAGE_Lactob_CL2_NC_028835: transcriptional regulator; LSEI_1942; phage(gi971748065)     5.15e-44            LactobacillusparacaseiATCC334MDSKRALAENLRKNIYDLNMTQAKYAKEIGIPINTLEYAISGKGSVSLNTLDKIAYGAGIDPWELIRPPESK
complement(1933574..1933642)       PHAGE_Lactob_PLE3_NC_031125: sliding clamp; LSEI_1943; phage(gi100053)               4.18e-05            LactobacillusparacaseiATCC334MIAVMLLISGAAMWMWANWKTK
complement(1933639..1934139)       PHAGE_Lactob_Lb338_1_NC_012530: hypothetical protein; LSEI_1944; phage(gi226377807)     6.13e-47            LactobacillusparacaseiATCC334MKREIKFRVWDKVYECYLYDVQNAYDTLSGCVKDENGEDAGYDEECFAGFLDNDQYVVEQYTGLHDKNGRKIYEGDIVKYHMVRSYGDRYDPVTLGFIGTDWDVDADIIGKVSIWPSNGVMMTNIITDDPDMFCKKYPVPKRWHVTHDCEVIGNIFENPELLEGKQ
complement(1934150..1934380)       PHAGE_Lactob_PL_1_NC_022757: cytosine-specific methyltransferase; LSEI_1945; phage(gi557308034)     1.44e-27            LactobacillusparacaseiATCC334MTKKIKHTIAYIILVSWTGIIIYGFANVLWDFLVKPFIEIGIVKSLIFFTLFVGLATVMWLIMSASEKLVKWLLKE
complement(1934377..1934787)       PHAGE_Lactob_A2_NC_004112: hypothetical protein; LSEI_1946; phage(gi22296564)        3.06e-60            LactobacillusparacaseiATCC334MSNETKRDVFKDLVEELANAYIALDGEGIGEDFTNEDKQAYLKDYEDALPDDLPVIPKAQSDWIKQCKANDDSLSFALGDETTPVEVAKTFRVLGGYTDKNKDKWLKLQNDFARAWVLGIWRVEETGEIVKLEEEK
complement(1934784..1934963)       hypothetical protein; LSEI_1947                                                      N/A                 LactobacillusparacaseiATCC334MTKTNEFTPAQIKAIRKIIRDEIDRHDKRLEREEELNQQELDEADAEAAMTARDWGDLD
complement(1934956..1935282)       hypothetical protein; LSEI_1948                                                      N/A                 LactobacillusparacaseiATCC334MANKIIRLESLSLMDHDEDPNDGGIFQTTRLIEVGHPYDEPYFKTVYDGSYRKLVERHSERDVVSIDFVRDPSDSDGNCYMVRLKDGNELFLPMHAFISESKEVTDDD
complement(1935272..1935823)       PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LSEI_1949; phage(gi48697298)     6.27e-75            LactobacillusparacaseiATCC334MSEEKLYAVKNDEGKYLTIERRAPWWDSQVGTAVRSSAVALAWTEKHGGHVVTFVEEPEKVVLTKEQAEIVEKARVSDISATYISARTDEYNGEESLLMEAFVNGYTVANEKKYNVKVPYAEGWHFQKYSSASKLGPRNDWKPFPAKDIDSNMSKELFQFTETEIEHYGLQDCEKEEVTDDGK
complement(1935820..1936059)       PHAGE_Lactob_Lrm1_NC_011104: hypothetical protein; LSEI_1950; phage(gi195661242)     1.11e-16            LactobacillusparacaseiATCC334MKAGDDTFDDIYVSKKTGKVVGVMLDGRDYKLIPFKNSKTKQPSRFEAGMRARGLFITEENKHKVMELVDWIYGKEEEK
complement(1936072..1936437)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1951; phage(gi100052)        2.07e-84            LactobacillusparacaseiATCC334MNRIIIPLPLMTLNQYIKVERGNMFGGAKVKKQATETVMLALRKAMNQGVKFQWGKPLSFDWYWYDRRTDPDNIAFQHKFIFDGMQKAKFLENDNWDHIVELRDRFFIDKANPRVEVEEID
complement(1936434..1936688)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1952; phage(gi100051)        1.08e-49            LactobacillusparacaseiATCC334MQAIKSTVNVGDLVVVPDRVFMGVRDLGGVARIIRIERYNARGASQDINKPVAFDGKAPKELITTVEMVDGKQRQYYLKDVKPA
complement(1936689..1937018)       PHAGE_Lactob_phiAT3_NC_005893: hypothetical protein; LSEI_1953; phage(gi48697292)     2.02e-48            LactobacillusparacaseiATCC334MTAEEMTNRALQHLDKHLLAYEASLNQTIADIESDYDQGYLDVTEAQWQDIIVLLGAVIHTDTRMICEASESICADGGVSGSLLRLLWLAKHFATLDFSMKPSIKQEAF
complement(1937015..1937797)       PHAGE_Lactob_phiAT3_NC_005893: DnaC; LSEI_1954; phage(gi48697291)                    0.0                 LactobacillusparacaseiATCC334MESTKGLFTHADVQKIIDKRGIDVNTLPTQAEIEHRFYERSMATLNRKKARAIYRYSVFPGDVPAKFTFDKWQPEMQTDLQKSRDLGNQAYKLTKQMQETPENVILFGPRGTGKTSLALAMLTSLRDEGQSGLFISTAELSNLMSLQYDAPDVRQRLAGIERAMKEADVLLLDDFGTEGGMKLDIKPVRRDMQELMYRVANARLDFESNSPRLSTIITTNNEMSELEHMYNSKLISRIIPKSKDCTLNFEKLTDVRGKKS
complement(1937784..1938584)       PHAGE_Lactoc_28201_NC_031013: hypothetical protein; LSEI_1955; phage(gi100012)       3.72e-08            LactobacillusparacaseiATCC334MAADWMPHPLNTRDQQNIAKMMMEQGIAGYGAYWALIEALAKEPTHQLPLEFNVLGYRLHIDAGLIKSVVSDYGLFAFTENGECMYSEDVNNWASDVTKMASKKAEAGKRGAKKRWQNHSTAIADLKQSNGKPIAEDSTLHDTTLQNNTKETPPKSPKGDGSVLSLPEEFATEVWPAYPKKQGNYAKSQEAYVQAVESGETTKDQVLAKIAEYKAYIKLNNKQEGFVTTAGNWFTGHGWRNEYDTKTPEKQTDRKEVKENWGYGVD
complement(1938651..1939211)       PHAGE_Bacill_phi105_NC_004167: hypothetical protein; LSEI_1956; phage(gi22855034)     1.71e-18            LactobacillusparacaseiATCC334MGFVYDASNTGMEPLKNGEYEVYPYAYDVTPARTTGNKMIVMNYRVRDDIEQAGAGSEIRFDNFVDVPNSRWRTNALTNATGAFQDKYDFGTIENWAEQMLGKPIRVKIDLEANSNGKSYPKVKNFMKSQVAMTHEPTVKRAKQSTPNQQSNVTPFSQPKQQQTTPDPFAGGSGKPVDISDDDLPF
complement(1939214..1940137)       PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: hypothetical protein; LSEI_1957; phage(gi100039)     2.86e-32            LactobacillusparacaseiATCC334MKIKKAERSKIKVPIMLMGASGAGKTLSALLIAKGIVESMFPDMVEAQQWEKVGMIETEHNRSSLYVNTEHDGATIGQFLQIELEPPFTADRYEEAFKLFKDNHVEVIIVDSLSSVWSGEGGILDKVNQFGGSIGDWKKVSPDQKKVLHMLTDSDVHVIATVRSKQGVEVTRSDTGKVQVEKVGLKPDQKDGLEYEFAITFQIYQNHIAQAMKDNSSIFDTAIQLDRNVGHKIYAWAEQGVDINVQRKVKAQAAFLKLVSDRPDLAEAAEQLKNQIGKKDLSEWTFDELKNGYKHLMAWSKKEKQEA
complement(1940134..1940754)       PHAGE_Lactob_Sha1_NC_019489: phage protein; LSEI_1958; phage(gi418489843)            8.21e-23            LactobacillusparacaseiATCC334MMNTTETAPVLNPALEDEYSKALDEIKQFGEAQTHTVHDLGSATWAMRKLGELNKEDAEARKVVQANIDQLNEWLQHSLEARQSRRNYLEHEVLAYVANNRKHDPKYKLDTPYGKVSFTVKRKATPAISDETQVLNFIKSNWNESEQTQVIKRTEKVLVSELKKQVTVAGDKVIDEDGQPIPGMHVDPAGTETPHIKPIQMTEALS
complement(1940751..1940918)       hypothetical protein; LSEI_1959                                                      N/A                 LactobacillusparacaseiATCC334MLDWSGKPIPFGESVITNVGPEGDNIKDDPKEIRKYTLEELSGVAIAADDQEEKS
complement(1940911..1941162)       PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LSEI_1960; phage(gi971743102)     1.73e-09            LactobacillusparacaseiATCC334MDTLGGRTMRDTKAYWQDIHDQAENVIYKSHGDSGWLWMFELSQRMLNKCAQKNPVAPTTGSQKLSTLNYNLSLSRKAVDDHA
complement(1941150..1941278)       PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1961; phage(gi100043)        4.15e-22            LactobacillusparacaseiATCC334MLEAIMSVLFDPTSAFWKYLLVALVGIMIGATAIGGWKQWTR
complement(1941291..1941500)       hypothetical protein; LSEI_1962                                                      N/A                 LactobacillusparacaseiATCC334MQDMKQREHKRTFITQTEAAHMFDVTPFSAKWRRMRQQTDFPQLHYMTNDPRERGTFKLSEIEDYLNNL
complement(1941506..1942012)       PHAGE_Lactob_LBR48_NC_027990: putative transcription regulator; LSEI_1963; phage(gi937456713)     2.01e-22            LactobacillusparacaseiATCC334MADEKYPRQLSLAIETSGLSKRSISRKSFLSESSIGKYALGQRSVDHEKKKSLWSLLKGVRLGLSSARADFGTISFMNNPRINEDVFAATTTADQEESERKAIWTDFKNAIKVPEEKRTRQQQETVTTGFKELVEEIASEQTELIELAEYGGIDPQPFIDKFNQTFGG
complement(1942070..1942228)       hypothetical protein; LSEI_1964                                                      N/A                 LactobacillusparacaseiATCC334MDREQMIEALMSYRDDKPKAFWETMDDDMLEMAISAERERARNEMIDYLATA
1942316..1942804                   hypothetical protein; LSEI_1965                                                      N/A                 LactobacillusparacaseiATCC334MKLSILGMQTLEYALKTSFENPVRPWYKSNDGLFAPAFFRQGPTGDLIAWTASRKGFPASQRQFTERFSPVIFDWFVHDFYDPDDPSKSLPDDSQTLLKVVKTSLLPSLESAEASLVQTSVGQTYQYPISYLTMSIKYENGLLLEAVELTNDEYELVGFERS
complement(1942764..1943006)       PHAGE_Lactoc_PLgT_1_NC_031016: recombination endonuclease subunit; LSEI_1966; phage(gi100058)     8.07e-14            LactobacillusparacaseiATCC334MKQINKKEIERQNYLSDFPRPKSSEALFGIKPHPVAVKIVNLIKKEGMTYEEAYASLQDAYNQLKYESNFVQIPQAHIHH
complement(1943003..1943248)       PHAGE_Lactoc_50101_NC_031040: hypothetical protein; LSEI_1967; phage(gi100003)       5.06e-06            LactobacillusparacaseiATCC334MSNSLRHYRREKEMSQLELAKQVGVTRLTISNIETGKTKDPATSITLRISEILGHSVDAIFGSENVNLDKHIPAQREEAVK
1943378..1944061                   PHAGE_Staphy_2638A_NC_007051: ORF016; LSEI_1968; phage(gi66395466)                   4.05e-18            LactobacillusparacaseiATCC334MSELGDYLRQLRGTMSLREASQRSHGRISHAAIAQAEKGINSHGKPFTPSAETLKEFAKLYNVSTTKLMKMAGYIEKSSDLPSNAIPVSSEVADQPVMVYGEIQAGVAKWAKQDIIGQINVTKSFAKRYGAKNLFALKVDGESMNREIPNGYTAVFSKDLEPESGDIVAVMIDSESATIKRFRETSLAVMFEPSSWDPSFKPYVFPKDGIQDFKIIGKFLYATSECI
1944077..1944925                   hypothetical protein; LSEI_1969                                                      N/A                 LactobacillusparacaseiATCC334MFWVWLILALLAIGIVFAFIKFLFAIWFVIVPILLVIAGIFITARFNLFTSKSRGKSIALWAIVSAISIALFTFGIYNSSTATTKSKPEQTASSSKIKISEIKSSSISESTEEESASSSGKDESQLKLGMTKEEIVNLLGEPDSKSDFSWSYGGKDIYFNDYEHLSGGNMGNLVDQVLASGRKSRASASNETNTQKSFAQSFGQKAVDRLQKMPTVYKSTQLDATTMEYMWNSEHGIMIRLDTTDRMTNVYLYDSNADYGKGRLLYSGRTIFTSPKVYNFYN
1944984..1945589                   PHAGE_Lactob_iLp84_NC_028783: hypothetical protein; LSEI_1970; phage(gi971743092)     7.40e-141           LactobacillusparacaseiATCC334MAKKVMGADGKQYKVKKPFYKRVWFWILVIVVVAAIGGGLNNKGKSSSESTEKTAVSKTDKSSSSTASSSEPEDKVYKVGEVASYKGYEIKVNNVKFDQGDDINTPDSGKQYVIANITITNNTDKSQDYNPFFFKLNADGNKTDFSEITTNVEDTLHSGSLDKGATVTGNLVGQAKTDAKSLQLQYQPSFWNDKSIKIDLK
1945690..1946460                   PHAGE_Staphy_80_NC_030652: hypothetical protein; LSEI_1971; phage(gi100016)          3.90e-07            LactobacillusparacaseiATCC334MTGTNPIPDETTNALLKPAAASLGEAAGTVLTSGFNLILNPLRKFNIRKEQEITDYATRIRDHIETIPEENRDGSKVNFVLKAVDDSKFRLNEQEMREAFARLIAKGLDNRVNSTFYPEYANILSNMSVEEASLIREINSNYASQVPCITLIARQPSGSNRDVLATAYLFDNNEDGSGKLDVPINLLEHSGIIKIKENSWLTDDHYKKKYEAYESRWRTIGEAPQKLGFADNETLDFRKSFVAFSDFGKSFVKFIV
complement(1946437..1946592)       hypothetical protein; LSEI_1972                                                      N/A                 LactobacillusparacaseiATCC334MLFTLILVALIVSLIVVVIALRIYTTGLVKELAIMENRIDNKIRLNNKFHK
1946729..1947154                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1973; phage(gi100030)        2.02e-99            LactobacillusparacaseiATCC334MANSTIRQADILLRECTVMQVATLDIDTGFPNIVSLTPLKSHRSLKEILFYTDRDTTTIHNVLEKPVVAVYCFNELHHSSLLLRAKAVVLTAEEALPSFTENLNSFQKSLQYDRPVIIRCNPLTVKIRYNNDIEFSKLNEI
1947178..1947381                   PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; LSEI_1974; phage(gi100029)        1.08e-39            LactobacillusparacaseiATCC334MNGPVTLSEAHFIGLIIVLIGVYFALFGHRHHWVHWLIDPDKPGSNLWWAAVFIIIGALMMMVRKMQ
1947436..1948278                   PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; LSEI_1975; phage(gi418489414)     1.96e-35            LactobacillusparacaseiATCC334MTAKVISFINMKGGVGKTTLCVGVSEFMAHFKSKKILLIDLDPQFNATQTLMDMYDLTDQYMNDIRFNKTIRLLFEETHSVSERPVLPKPDKVILHLDTSDVIDGELDIICGSIDLIKDDDSRKSKYKRVRKFLREQGLLKHYDYIFIDCPPTISFYTDAALYASDYYIVPTRIDRYSILGINLLKTVIEQAKFDDDLSIEPLGLIYTNYPTNNIPAPKQQEILDVLEENKDVLEIGVFRNKFHYLEHLMTGKSGNIASKYVKSKKDIEKISVEIESKVH
1948295..1948690                   hypothetical protein; LSEI_1976                                                      N/A                 LactobacillusparacaseiATCC334MVKHLTLAQFQNLPSFAADQYVLGYAAMIIERFKHNPDIRPFLENTFELTYKDYVFKSKTLVISRVLRDLNKSLGNQTLSAEQVYSSLNNFTSNKKSKDLLSEKQEYAIPRTSAKKKSNSNDKLSKWLQGL
1948695..1949351                   hypothetical protein; LSEI_1977                                                      N/A                 LactobacillusparacaseiATCC334MEFKHSIEVDITRSVDLVLDRISDKNSAKPFLTLCHSNIIANIIFIKYIWYSREKYKFADNLISDLLNAYCALANADSRIFYFYLRSSIENFYKSSTIADDSTQISYYKAEKNFGQLTGSSFNFIWQFKFIKFQYSQFSDSVHSNPKTNRSKTDEYIEDSLNKNDFSSPAILMSSSYDLMNLLHVYADFYLRMPNFEPREDSFYRHKDWLNYFLELLN
1949483..1950646                   PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; LSEI_1978; phage(gi100037)     1.78e-47            LactobacillusparacaseiATCC334MPKWTPYKRHPGVYEYQTKKGKRFGVRRTYDDAMGERKEFSKSGFIHWQDADIEIKRFEAKLVSGEVSGSLANRMTIDQYYQQMAKRKMKMGIWRESTARANGNFYSKYLKPAFGKTPLQDVSRAKYQRFLDELSQSGLALTTVHTIDAVMKSIMNAAEFEDVIDKNRLRGMQINGKAPRNKDLEPHSFELWLNAAKTNLDKYEMALIITATLGLRRGEVMGLRNESIKISHDQINDADVAQISIDMQRNTNELNGGPLKTKSSYRTIWAFGKTVDHLKYAMITADNLRQRNNIQAEKHWLWLNNDGNPLHPTHLNRLMRRVSNRSGVEVYPHLLRHYFATQAIAANKPQIDVMHYLGHKNLQMTADYTRSTKAASLNVFNSIDKFL
1950805..1950831                   attR                                                                                 N/A                 TACCGGTCATTCCCACTCAATCGTTGC

#### region 3 ####
1984948..1985964                   PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_2007; phage(gi9635740)             1.25e-43            LactobacillusparacaseiATCC334MTHSQTNTHKHYQQLSFSDRATIQALQAAGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAMHDRKRDRTGHYAFLKTGRAFFKALSRELTRKPRVHSVDSFVHFYRDQGKACPSTTTVYRYIDAGLLELDNMTLPKKLRRRIKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRLADEPALMTLTERYSRTEIIVKIPDYHAGTCLKALQDTIDDYGAKEFESITFDNGSEFAKLSEIVGTKIYFAHPYSPWERGTNENANGLLREFFPKGKSLRAVTLVEIQAVQSALNHRPRRILNYLRPCDYYRCMA
1986192..1987121                   PHAGE_Staphy_phiPV83_NC_002486: transposase; LSEI_2008; phage(gi9635740)             5.51e-60            LactobacillusparacaseiATCC334MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
complement(1988491..1989549)       PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; LSEI_2010; phage(gi14251157)     4.85e-19            LactobacillusparacaseiATCC334MKKCLGGIVFAAICFILFLMPGLPVSAAASTPIYRFYSPRTQEHFFTYNPAERDQLITRGWGNYEGISWYAPVSGDNIYRLYNPALDDHLYTRNWSEYYTLSTQRGWTAEGVAFYSDPNQGVPVYRLYNPSLKSGSHLYTTNANEVAVLQGRGWSYEGIAWYGSSLTGQTPDTTKVLGVSFISQEAAGAPMGCEAASALQALQYKGHATGYNLRSFLQTMPIAANGNPYQGFGGTPYVVVSGVYQSIFPSAFTPWVSRFGGATNISGSGLDVILSQVASGNPVVAWVTLNYQSPQWHQYNWGRGIDNAHVVTVDGYSDQSVHVVDPENGTYWISKSAFNTAYSYMKFAVAIR
1989950..1990609                   PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LSEI_2011; phage(gi9626114)     2.77e-27            LactobacillusparacaseiATCC334MVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
complement(1990929..1991771)       PHAGE_Entero_phi92_NC_023693: Phi92_gp064; LSEI_2012; phage(gi726646997)             1.81e-42            LactobacillusparacaseiATCC334MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAAYTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDRKDIYTVDDQPAPRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQYGRPSWTKNLAEFMTFAVDQKLAYGIYHLSNDNSCNWYEFASAILADKDVTVKPVSSAEYPQKAWRPRHSILDLSKTKATGFKIETWQDALKEFLQVIEK
complement(1991846..1992871)       PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LSEI_2013; phage(gi100279)     1.49e-42            LactobacillusparacaseiATCC334MKLMITGGAGFIGSNFVHFVYKNHPDVQMIVLDKLTYAGNKANIADLLGDRVQLVVGDIADKEVVDKWMAKVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAARKYDVRFHHISTDEVYGDLPLREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAASDMLVHAWARSFGVRATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGTGKNVRDWIHTNDHSSAIWDILTKGKIGETYLIGANGEKDNKTVLELILKLMGKPTDYYDQVKDRPGHDMRYAIDASKTREELGWKPQYTDFEEGLADTIKWYTEHRDWWQDEKAAVEEKYQEHGQ
complement(1992874..1993446)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; LSEI_2014; phage(gi726646998)             1.76e-41            LactobacillusparacaseiATCC334MSLKVIPTKLQDVKLVETDVFGDNRGFFTETYTRDKFVAAGITNDFNQDNQSLSAEAGVLRGMHYQMAPDAQTKLVRVVTGVVEDVLVDIRKGSPTYGQWEGYILSEFNHRQLFVPKGFAHGFITLTPNVNFCYKVEGFYAPQSDRGIAFDDPDIGIQWPMSTDHLIMSDKDKKHPQLKDAENNFVYGEI
complement(1993458..1994330)       PHAGE_Entero_phi92_NC_023693: Phi92_gp066; LSEI_2015; phage(gi726646999)             7.96e-127           LactobacillusparacaseiATCC334MKGIILAGGSGTRLYPITEAVSKQLVPVYDKPMIYYPLSTMMLAGIRDILVISTPRDIDRFQDLLKDGSQLGLNITYKVQDKPNGLAEAFIVGADFIGDDSVCLILGDNIFYGSGLSKLVQRSAAKTSGATVFGYQVNDPERFGVVSFDDEHHVKSIVEKPEHPASNFAVTGMYFYDNQVVDIAKNLKPSPRGELEITDVNKAYLERGQLDVELLGRGYAWLDTGTHESLHEAASFIETVQKRQNLKIACLEEVAYRMGYINRDQLRELAQPLKKNDYGKYILRLADEKA
complement(1994760..1995614)       hypothetical protein; LSEI_2016                                                      N/A                 LactobacillusparacaseiATCC334MKKTLLLLPAVLLLFATGCGQNSQSSSKSDSVRTSQSKKQAKKSSTSSKRSSAASKTDNASGSSSSVATPSSSANGTADATEQRYAALKQATYNQLGQVKWPANYAVNPNQYLNVLGTGDSHNYSLFFSQGNAALAYNDASLQSVNAEFAIQKKTYANASQAQAQISADQSTQGLPQVAIGDGISATKQGAAGSTYLTWQEGRWTITVRASTINGEDPLPLAKQAVAWFASNALPVPDSHGTVDLSVTTSDTRQNQITWTEGSQVFLISGLDPMKTIREGTETR
complement(1995754..1997154)       lipopolysaccharide synthesis sugar transferase; LSEI_2017                            N/A                 LactobacillusparacaseiATCC334MKQSAEWNGLKRLLTMIGDVGLFNLSILLAFYWRFGRVIPEYNFDMYERSAIYISLLFLFVNFFLGVYVYYNRRISDIIFNTVLAQTITILGLTMITFMGRLFAFPRLVLGYSFLLSILILGIWRIFIYYMYVRFTSNYKVAVLSYEHELPAVLENFNSAKNNKHKVTYVVSDHFVENAKAIIDKVDIFYLTKGLPDETRREIIDIIIKHEKTILLPSTFDNLLMLRPNLMNFEDESVMGMTQFRIKPESAFLKRIFDIVVGILMLIVASPFMLITAILVKLTSPGPIIYKQVRITMNQREFKILKFRTMSATAEAKSGPVLATEHDSRITPVGKYLRKFRLDELPQIFNVLKGDMSIVGPRPERPFFVNQFNEQEPHYYLRHNVRAGITGYAQVYGKYASDYHSKLKFDLLYIKTYSIFLDARILLQTIKILFDKVSSQGLEEDPEPARQKLHDIVVEQDITHLS
complement(1997310..1998245)       PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; LSEI_2018; phage(gi100233)     2.61e-38            LactobacillusparacaseiATCC334MSNYLVTGGAGFIGSNLTELLLTDSKNTVTIVDDLSMGLRENIPDSDRVTFYEHSITDHDFMSRLLIDGKFDYIVLLAAIASVADSVERPYATHLVNQEANLSMLETLRTHQITFKKLYFSSSAAVYGDSPALPKAETMAVKPLTQYAVDKFATEREVLNYGRLYNMPVVCTRFFNVYGPKQNPKSPYSGVLSIMMDALKADKPFTFFGDGEQTRDFIYVGDVVRAIRGLLETPSARDDVFNVANGQQTSLNQVAKELEKLTGKTLHATYQEPRLGDIRDSYAQVDKLDQFDFMPHTPLAEGLAKYVASVE

#### region 4 ####
complement(2039044..2039703)       PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LSEI_2053; phage(gi9626114)     2.77e-27            LactobacillusparacaseiATCC334MVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFDQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
complement(2040346..2041320)       PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LSEI_2054; phage(gi100279)     1.66e-39            LactobacillusparacaseiATCC334MLITGGAGFIGSNFVHYQRQMHPADLIVNLDLLTYAGNKNNLTDLKHDPSHIFVQGNINNRELVAYLIEQYHIDAIVNFAAESHVDRSILHPEIFVETNVKGTLALLHEAHRHDIKLLQISTDEVYGSLGPTGYFTEDSPLQPNSPYAASKASADMLVRSYFETYGTHVNITRSTNNFGPYQFPEKLIPLMITRGLDGEKLPIYGDGKNIRDWLYVRDNCRGIDLVLREGKTGQIYNIGAHNEYDNNTIVQLIVKQLGLPESQITYVKDRPGHDRRYAIDPTKILDELGWRPESNFRTGLDETFGWYAVHQDWWQPLKDKMIRK
2041749..2042402                   acyltransferase; LSEI_2055                                                           N/A                 LactobacillusparacaseiATCC334MSRGFFYVKHYQSEQAIAVNQSTRQRIQKDSKAKVKKEKVLNQYRLYGLTDSEINAAKTLPVSAIGDSIMLGSSAYLKVLFPEMSIDAEVGRQVQAAPAIISQLKSSGKLANTVVISLGTNGPMTEADINGILDQLGTERQVFWVTAYAPGKAWIDPVNKLIHAAAKTHANLHVVDWYYLAGGNDDWFADDGVHPNDAGRPHYYTLIAKDVMQTLKK
complement(2042683..2043183)       PHAGE_Strept_Dp_1_NC_015274: QueT; LSEI_2056; phage(gi327198320)                     4.77e-16            LactobacillusparacaseiATCC334MQTTSTTHRSIVSLAKTAMITSIYVVMTLMLSPLSFGVVQVRFSEMLNYTALFNRRYVWAVTLGVFLANLTSPTALLDVPIGTLGTLVFIIISRWLAKLVQPKWAKFTIMGILFALSMFTIAGELTILTKVPFWPTYATIALGEAISMAVGGVVMMILTRFVDLDK
complement(2043295..2044008)       PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; LSEI_2057; phage(gi971760361)     7.70e-08            LactobacillusparacaseiATCC334MTHFDFTDKTVIITGAASGIGAAQAAAFQAAGATVVGIDLQPISNLTDAIQADVSDPATAATIAAQYQPDIVCNTAGVLDGYQTVTDTALSAWQHILDVDLTSQFLMIKALLPGMLARGHGIFINMSSIAGLVGGGGGVAYTAAKHAVIGLTKQLDLDYAAKGIRANALAPGAINTPMNAADFAGDGKMAAWVARETPAKRWAKPEEVAQLSLFLASDAADYIHGTVIPIDGGWLEK
complement(2044005..2044229)       PHAGE_Bacill_G_NC_023719: gp59; LSEI_2058; phage(gi593777527)                        3.75e-13            LactobacillusparacaseiATCC334MTFEAILPSLKAGKKAVRTGWEGTELYVQLVPEGKFEGDTLNPYFLIKTADEAFSLWSPTDCDILAEDWQLVNA
complement(2044514..2044825)       PHAGE_Shigel_SfII_NC_021857: CI repressor; LSEI_2059; phage(gi526244671)             1.22e-06            LactobacillusparacaseiATCC334MLDNIGKLVHQQRRSLNLTIEKLAERSGVSISLISRMERGDVNNISIKKLTDIARALNMQVGDFFIAPEMSDISTLAVVKYLTHLPEKERARVSEVLMQVINL
complement(2045085..2045723)       phosphoglycerate mutase; LSEI_2060                                                   N/A                 LactobacillusparacaseiATCC334MTKFYFVRHGQTETNLARRFNGGRTDTPLTASGRDGAIAVGRFLATTGFAGIYASPMPRAQTTAELIVAQSRVVQPPIVTDRDLREVDLGKWDGQPLTSVQDDPEIDHYYHHLTAFDNQRIGAESFAHALKRGRRAINRIYDAHPDGKVLVVAHGLIGMLLLSTYLGADLDSARDAMRIPPNNSISELDTSDGEQFTRGSLWAFVPATAESK
complement(2046032..2047009)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LSEI_2061; phage(gi371496158)        1.19e-25            LactobacillusparacaseiATCC334MVDKKDKKVLVSVKHLVQTFNAGKKDQVKAIQDISFDIYEGETLGLVGESGSGKTTTGRAIIRLYDPTSGEILYNGKDIAKLKNGSKQMLAFRRATQMIFQDPYASLNPRMKVKDIIAEGIDIHHLAKNNADRDHQVEQLLEEVGLNADHATRYPHEFSGGQRQRIGIARALAVQPKFIIADEPISALDVSIQAQVVNLLKDIQDRQGLTYLFIAHDLSMVKYISDRIAVMHYGRLVELATADEVYSHPLHPYTKSLLSAIPVPDPDVERRRVPLPYDASKVEGDNKKRKMVEVYPEHYIFAADDEVAAYKAEAEADHQGVKAAQ
complement(2047011..2048063)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LSEI_2062; phage(gi371496158)        1.90e-23            LactobacillusparacaseiATCC334MSKILEVKDLQIDFATYAGPVHAIRNVNFDLNKGETLAIVGESGSGKSVTVRTVMGLLAPNAKITHGEVLFNGEDILKKSEKQLNAMRGNDVAMIFQDPMTSLDPTMTIGKQVAEPLLLHSKISKADALKEAERVLDLVGIKDAGGRLKDYPHQFSGGQRQRIVIAIAIINHPQILLADEPTTALDVTIQAQIIHLLKEIQSKIDTSIIFITHDLGVVAGIADRVAVMYAGKIVEYGTVDEIFYNAQHPYTWGLLEAMPTLETKSDRLYAIPGTPPDLLDPPKGDAFAPRNPYAMAIDLEQEPPFFKISPTHSAATWLLAPGAPKVELPPEIARRHALWASKHQDEKVVN
