gi|00000000|ref|NZ_CP017433.1|  Achromobacter ruhlandii strain SCCH3:ACH 33-1365 chromosome. 6366684, gc%: 67.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1305964..1305977                   attL                                                                                 N/A                 CGCCGGCGCCGCCG
1309781..1311147                   PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; AruCF_RS29045; phage(gi17546155)     1.77e-131           AchromobacterruhlandiiMAKYDQSFKLKVVRQYESGSGGSKAIAARHGLDHATVRRWVTRYQAHGTSGLRRKSASYDAAFKLKVLKRMWREQWSEAQTAVAFDIRCASHIGKWARQYHAGGIDALRPLREGRPKTMSTKPAKPDVPRTELDDKQIIARQNQELIELRAEVAYLKKPRCLDPGKAACGCAEKAQAVTGLRQHHPLAALLKAASLARSTYYYQVKAAQTTDKYAEIKGRIRAVYTSHKGRYGYRRITAVLRQAGQSVNHKTVQKLMQVLGLKSLVRTKKYRSYRGQPHHVAGNVLARGFEAACPNEKWVTDVTEFNVHGQKLYLSPVMDLYNGEIVAYETSRRPVFELVGSMLKKALARLRPTEHPVLHSDQGWQYQQPMYRRMLAARSVTQSMSRKGNCLDNAAMESFFGTLKAEFFHLNRFESVEQLQAGIRQYIRYYNHHRIKLKLKGLSPVQYRAQAFGL
1312083..1312676                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05950; phage(gi966201429)     2.10e-26            AchromobacterruhlandiiMANSSATGGYLAPIAISPPLEDAELEALFQGFIAGVAGLPLDLVRTRWPAAGVEPPAQTETWCLMDIRSQTADAGPVVTHDPAGEGSDSYVRHEHIEVLCSMFGPRALRHAALLRDGAAVPQNREPLLAQGMAVSGAGPIVAMHELVNQQWIRQFDMTLRFARRVARSYPVLNLLSAQVTTHAASLSPTDNINHLAD
1312687..1314162                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05955; phage(gi966201430)     5.08e-73            AchromobacterruhlandiiMANGLPVSRLINVTINMSPLAAQGASLNTALLLGSSAVIDTGERMRSYGGIDAVAADFGTGAPEYRAALLYFQQTPQPSQLYIGRWAKGATSATLRGAVLSAAEKQMSAWTAVTAGAFTLTVDGTAKTVNGLDFSGATNLNGVAAIISTALASASVLWNGAQFVVTSNTSGATSTLGYATAAGTGTDISSMLGLTAGKASTPVAGIVAETPVDAVSLFLDRFANKFLGLAFADADITDAQHLAVAGLIEADQRHLYGVSTQAPQVLDPTHHDDIASQLKALKYKYSIVQFSSASPYAVASLLGRLLTVNFNANNTTITLMYKQEPGIVAETLSSSQADTLAAKNCNVFVNYDNDTAIIQYGVTPSGIFIDSVYNAIWFRNRVQTDVYNLLYTSPTKVPQTDAGNQLIASVIEAACEAAVNNGYLASGVWNSAGFGALKQGDTLAKGYYVYAPAIATQSQADREARKAVPFQVAAKEAGAIHTVDVLVTVNR
1314176..1314616                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05960; phage(gi966201431)     1.82e-45            AchromobacterruhlandiiMSTYSFADISASLVGPGGAISLGSGSGVADGIAIAAKGEKSAMTVGADGEVMHTLRADKSGTVTLSYLKTSPVNAQLQALYDAQSLDSRLWGKNLITITNPATGDVTACRSCAFSKKPDLTYKKDGDVVKWTFDAAKIDTILGTY
1314620..1315069                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05965; phage(gi966201432)     2.80e-19            AchromobacterruhlandiiMSQELDLNGHRYSIGKLSAKQQFHVSRRIAPIVPTLIPVFVRLAAGGRGITEDPGGLADVLQPLADGLAAMKDEDADYVLDTCMQAVQRRQEHGWTAIWSASQRVPMFQDIDLAVMLPLAVRVIVASLGPFIQGLLTSQTGSPEATQAG
1315096..1315254                   hypothetical protein; AruCF_RS05970                                                  N/A                 AchromobacterruhlandiiMLAPVLEGLCKYESLKDGTLDLADIALLNDALSVRADNKAEAYRRHMAEKNG
1315247..1316467                   PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; AruCF_RS29050; phage(gi966201433)     7.56e-09            AchromobacterruhlandiiMANTTVPIDPSGLIGIFKIDKDDLKDLKQAIGDSRKQSLADALAVFAGRAKSVVDFAENKIAQFEQGYFAAKLGGTSGRDMRALEAVAQDFGVSVEAMRNSTQALHRNVRDDPRIAALLEQLHISSSDGAGAQRNSADLVLELSDALKRMDPAQARATGQSLGLDPGVMEALRDPGFGQRLSAQRDTQENSTVEAAGERAHQLMGTIRELSGSVNAMFAQALLTMGPKLQETLDGISAWFKENGQTAGKRLGEVGNFVLSIMSLLGPVISLITWLDGLTGGLSSQLLVLVGGFLMLVGGGVVGALMGLVSRLGGMRSIIGGLGTQLASLPGRISGVVSRAWTATSNFVGGVFGRMTSMGRTAVTQMSNMASAVWSWMGNMAARGGALVVDSVKAAGATALQWGQSLW
1316471..1317322                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05975; phage(gi966201436)     6.26e-32            AchromobacterruhlandiiNTATIKVMNASRETASLVQREFTRVVLQAGYEGNYGVIFHGNVVRAKWGGSGDTETVLEITAADGDKAYNFAVVNATVPKGSDRADKVRLLCSAMNPYGVRQGYVPDLGGKKSIRGAVMSGMVRDYLQDVCGSANTLWSIQDGKVVVVPETAYVPGSVPVLSHDSGLVGMPEQTEKGIKLRMLLNPSIRVGGLVNLDNSRIAEYGFQARSERKDANEIDRAEQRRISGDGYYYVMEVEHRGNTRDDEWYTEVLCLATDATLFPGDLGRAGAEGDAAKPAAVVK
1317357..1318100                   PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; AruCF_RS05980; phage(gi966201439)     2.62e-54            AchromobacterruhlandiiMNRLETLNDPQAAIGAALHGALAQTWTAMPAIIGAFDPVAMTCTAQPAIRARVKTPEGRQHSLALPLLVDCPVYFPSGGNCTLTFPVKPGDECLVVFASRCIDAWWQSGQVQDQAEMRMHDLSDGFVYVGVRSQPRVLPAVSTSATQLRSDDGSTFLELDPAAGKVKIVAPGGFDVVAPVSEFSGQVLVNGLLSYLAGLVGSGGQGNTAQITGVLNVIGQILANGKRVDDTHTHTAQGANAVTTPPN
1318109..1318462                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05985; phage(gi966201441)     2.35e-27            AchromobacterruhlandiiMRYRKLDADGDYSFGSARADFHRDTAQAVAQAVKTRLMLARGEWFLDVAEGTPWNGEVLGKQPRASYDWAIRQRILGTAGVTDLAEYSSRLDPQTRGLSVTASISTLYGTATVQAAL
1318459..1319640                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05990; phage(gi966201442)     2.82e-101           AchromobacterruhlandiiMTILSTAPVIDATGIRAPSYGEVLQYFKEQYRGIYGADTYLEADSQDGQLLAVFALAIHEANTAAINVYNAFSPATAANAALSSNVKINGLARGVATRSSVDLRIVGQGGVTIVDGVATDADRGRWLLPASVTIPPGGEITVTAQSQALGAVTAAAGSINQIGTPTLGWQSVSNPAAATPGAPVESDAALRVRQAVSVALPSRSVLEGTIGAVASVPGVLRHAAYENDTAAADAHGLPPHSIALVVDGGDAALIAQAIAAKKTPGTGTHGTTTVVVTDIYGIAHRIRFFRPTIVPLAVDVQMRALAGYNTATGQAVQRAVADYINGVAIGGGASASVEWADAISAANGVPGNGTFKITGLTLRGPAGNGVPDVPLAFNEAAAATPDDVKLTVT
1319642..1320307                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; AruCF_RS05995; phage(gi966201443)     4.41e-56            AchromobacterruhlandiiMANADDYIARLSAYHRGKPKFTATVTALCDAAASLSELYGGMPAAFDLDLAVGAQLDAVGRWVGLERKVSTPIANVYFSHDLDGLGFDQGVWQGPFDPDSGLTELDDDTYRLLLRAKIGANHWDGTLETSAAILDRIFGGGTHVFIQDNGDMSVDIGVAGAPPSALFLALLTGGYIPLKPEGVRISYYVIPSQEGPLFGFDVQNHYISGFDSGLWGSLFAG
1320322..1321323                   PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; AruCF_RS06000; phage(gi966201444)     1.78e-19            AchromobacterruhlandiiMAINQILPFGTVPGANVLAPADYQALAARLGGFSAGTAKSKELNTVWRQASFVAAMIGQYIADKAGQDVLDDGDLAALQARFVAALAASPAFTGTPTAPTPAATDKSTRIATTAFVAGNFPRIYSIGALPTQDVGPIIVAECAEVWNWVSGQYYTGYRSPLCGRPLDGHTNLPLASEVDAIGGLLSKTDYAALWGYAQEQGLVKTEAVWSANRGSHWFSDYSATQFRVPDLRDMFRRFTGTDADTANARSLGTVQRGTLTVYDIGPNDAVLVGALGCQSANSARSIGADPANLSRYPILRVTTIGGGLIEAMNTPTAGVVRPENVAYHPRIHA
1322573..1322923                   PHAGE_Entero_Arya_NC_031048: hypothetical protein; AruCF_RS06005; phage(gi100017)     5.92e-07            AchromobacterruhlandiiMQKEVFQADNDGLYLYQSVANELALTPGTFNIPYGAYEDAPPAPPAGKWPRRVGDAWAMVDDYRTTPLWVVETGMPYSIGAEHDSAGGKVSYPGWGQLPAWLTSVEPPRRDESATV
1322694..1322707                   attR                                                                                 N/A                 CGCCGGCGCCGCCG
complement(1322927..1323949)       PHAGE_Pseudo_PAJU2_NC_011373: putative integrase; AruCF_RS06010; phage(gi209552450)     1.58e-33            AchromobacterruhlandiiMKPWTRRQPRRKPAPTLAEALTRYLVEVSATKKGHTSEQSIARIWRATRLAIRPVDRIRSSDLTELRDEWLKDRAPATVVRRMAFLSHVYTVIRKDWGFDQLANPVQLVRRPAVDDARDRRLFDRITLRGLSEDDCPRKELEWIIRATRSTELPTILTVAKETGMRRSEVVGIQREHLDLMHGVVHLPHTKNGRARDVPLTPRAREALRRWVTGKPMRGRIFTMQPGSVTRAFIRARRRARLRYEGMCRHYGRRPNAAYFRDLRFHDLRHEGTSQLATVFQIHELAKVNGNVDTRMLLRYYHPHGRELAQKLARSQLGRRQLEEMRREREVEMEALPLAA
1324137..1324598                   PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; AruCF_RS06015; phage(gi100022)     1.22e-14            AchromobacterruhlandiiMEPASTGLGGFAALKIALAFGMPAAMAALIGMLLMPPRSPREFVARTACTVVSSFLFGPLLAIGMIAWMPDIMSSAYWMAQRTGLGEDGLLAMFYVLGPCMLLAGLPAWWVLGAYLRLTAKLQNQDLVDWAVEIRRKTLGMDTQTDKEGRHDA
1324588..1325118                   PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; AruCF_RS06020; phage(gi985757722)     5.04e-48            AchromobacterruhlandiiMTLDQIMDEALRLALALLPARMDTREAQCMLLAIGLQESRFVHRRQIGGPARGFWQFEKGTRASRGGVWGVFLHAASKAHLAVLCQARGVACDPDAIHAGLEHDDVLAAGVARLLLWTDPQALPPVGDAVAAWALYLRTWRPGKPKPDSWPALYSQAVAAVRARADRRATHVAAVD
1325099..1325371                   hypothetical protein; AruCF_RS06025                                                  N/A                 AchromobacterruhlandiiMLQQWIKRGLGVMAAVLAGLAAIAGVYWRGRAMGRARERSDNAARLQERAGQARREARDVQEKVARSDDDAVADRLKSGWVRAAPPSDRD
1325712..1327286                   PHAGE_Bacill_G_NC_023719: gp350; AruCF_RS06030; phage(gi593777806)                   7.81e-23            AchromobacterruhlandiiMADGESLAATQVRPRYRYSMRAGLLVLVFACIAPALMVASVAVYESYQIQRERIFRDTIFLARNLTAILDREMTGVEAGVQILASSPDLLAGDLAGFHQRARDAIKFQIVDSYVLTDKDGHQVVNTLVPYGTALPSSGVSQELTRVFRAREPVLSSLFTGAVSRVPVIALGVPVVRGDEVIYSLNVGLSPERIGNVLGRRGLPEGWVAAVLDRSGTIIARTRDAERYVGQKAVPTLARAVQMESEGSLESTTKEGTPVYTAFSRSSLTGWTIAAGAPMTLVTTDLYRSIAWLALGTLTAFSLGLWLALRLANRLTSAVQGLVGPALALGEGRTVELPATSVKEAEEVGTALLQASRMLAHAQHLAHYDPLTGLCNRVLFGELVLRELAVAQRSGQSFAILAIDLDGFKAVNDLHGHAAGDTVLKEAADRMARAIRVSDVAARLGGDEFAVLLLESDQDGAQAVAEALVESLSLPYPKIRVAVSASVGIAVYPQSGVTMLQLLERADVALYRAKGLGKRRVASDR

#### region 2 ####
1431724..1431737                   attL                                                                                 N/A                 GGCGCCAGGCGTTG
complement(1431941..1433086)       PHAGE_Bacill_G_NC_023719: gp350; AruCF_RS06500; phage(gi593777806)                   5.41e-26            AchromobacterruhlandiiMNNTDRIYSVPTLRFTRWLIDPGRNVPPDIRVALVRGLFGSLPIFFGGIINTLLVAALITLRRPDPPFLIWLALELMICASRIAVLVSAHRSALAGRPTPTDLYVVLALLWAGSVGYGTFISLISGDWIAATLACLSAASMVGGICVRNFGAPRLSATMVALSVGPCALAALFTREPIFWLVLVQVPLYMATMSMASYRLNAMLVSTMLAERENERQARQDSLTGLLNRYGLLRALDLAVGRAGQGKAEFAVLYLDLDGFKSVNDTYGHGTGDALLRQVSERLLALKPSDAEAGRIGGDEFVLLMRLDSAEDIRRFAERIIDRVRQPYDLQQEMPIYIGGSIGIALIPRHGADTAAVLHAADRALYLAKSAGKSRAAMAQL
1433233..1434720                   PHAGE_Bacill_G_NC_023719: gp350; AruCF_RS06505; phage(gi593777806)                   2.65e-20            AchromobacterruhlandiiMKSHGLLHRSLYALAGLIAIGICAAAVALLWMDRRITWNLAYVAASNLAEVLSADIGRTIRVYDLSLQGVIERLHEPDIESLPRATLQRFLFDRAASAEYLGTILILDKDGNIRYDSQSLLPSNVNFADRDFFQIHRDNADVGMYISRPYLSRLRGGDESIGISRRISNPDGSFAGVVSGSLRLAYFRERFASLSIGPRDAITIYRNDGVVIARTPYSSRDLGSDIGQALDFQQFVARREGVFVGVLAPDGVNRLYTFDSVPGAPLIIDVAMAVDEVLEPWVRRAMLIIPVTLALFASVMAQIVLYRRETRLRREVESQLEKEAQTDGLTGIANRRTFDEALAREWASAARERQPLSLLFLDADRFKLYNDRYGHQEGDQLLKMLALTVRGKARRPRDLPARYGGEEFVALLPDTPKERALEVAERIREAVVGLRAQHEDNEGGIVTVSIGVATVIPGPDDDVATLVEAADAAVYRAKEMGRNRVVMADDPAAAG
complement(1434787..1435491)       DUF3053 domain-containing protein; AruCF_RS06510                                     N/A                 AchromobacterruhlandiiMKTLFRPFLLLALALPLVLAACGNKEPEQRAAFMQFLQTRIVDKPGVRVPQLTDEEKKSFGDYAAQYAVITDFNAGMDASVKPMGSLMQKGAVRSLNDVIARRDDIKTVQTALKDMGEALTKEQGKADAAHAQLKQPDDLKAVYDKAYDKTVTVPANTFREVLPQISGTLDSSLKVAEYVEAHKTQIDLSGPAPRVQDPTVLAELNKLLQELSAQAQKVQQAQTRLQAVMLGGR
complement(1435890..1436774)       PHAGE_Shewan_3/49_NC_025466: hypothetical protein; AruCF_RS29055; phage(gi712916141)     3.40e-55            AchromobacterruhlandiiMTNSYDVDHGLSQCHPGALEPIELPKVAAQQFRKKPVVVQASQWFKNGDHPLDYSKTHDGLENGALRRFSPEERRANGWEGDIVRYYRHPDDSGERPCQHCGNTMHVHGWIDTKEGGHIVCPGDWIVTGVQGERYPCKPDIFAATYEAAAPGVSTVEKRRPARDWELTCHECDGSGHVYVKHQVAERKTDVQEFKEECECCEGRGFVFAFQDIPGIEEYVKACRPAPAGVSTVEGPWPVDGDHLPAVRARRIGQGADRQHQIGGHHRRVGECYAGAHVTAGHRRGRRAQHPDDG
complement(1436777..1437280)       PHAGE_Caulob_Cr30_NC_025422: hypothetical protein; AruCF_RS06520; phage(gi725949275)     1.04e-09            AchromobacterruhlandiiMTEPLKIQELEKVGYVGSCQSSPASYASYMDSRWSTPTPERVAAHALAKLEEARQKDLAAHELNIPRIDINKAIHDRVTAMMAEIGMPSSWSEPDRKSRSRYPKSIRHDAGYLLDLRREAKTSDGFDYATTTYESLKKRYEEYAEDLIRQTQIKAELEAGAARATGA
complement(1437360..1437884)       hypothetical protein; AruCF_RS06525                                                  N/A                 AchromobacterruhlandiiMFSITEQTATLAHINVRTERHGEEPAGAADLKIQFTAGNGVLSEFHPRLRHALYKAEENPAQGSVDGVMPEPTVRVFGDLIEKIRLKHELVGAKVLIDFGLGGDSDIELDTADVDGFAVEMMEGGSVVTTFRVKCHPSGEQVKKLYEVLGNEITISITPAAEKQGSLGLGGNED
1437942..1439468                   PHAGE_Pseudo_JD024_NC_024330: tail length tape-measure protein 1; AruCF_RS06530; phage(gi658307221)     6.23e-47            AchromobacterruhlandiiMFGGIGPAIRAVVGYVAGLLTPITLVTAGVVAMAFAFEKGANEVRAFQNAITMTGGAAGVTANELGAMAKRIGDVRGTTAAAAEALTKLVDTGKLGADSIEGLGRAAILTQAATGRSVDDMVKDYERIADAPTEAITKLNERYHFLTLAVYEQIAALEKEGRQQDAARLALTTYSQAMEERSQQVVQNVGYIEKAWNGAKNVAKEAWDAMLGIGRDLTPQDRIGQIQKELDQIGTSFFHQDRANALRAQLNGLQELVKWQNAAAKAQADEAGAVARGIQARRDLDSYMDSRKGTSLTASLEAENKAFKKATSEFSQDSQEYQDALKAHTDRVAQIQKQFAGPKGGGTVAAGVRELEQARQQEAVLRAQLESAVKITTARQELVKFEQRIADLKAKDQLTADEKSVLANETATTARLGRGTLDALNAGGPLPMSDSGGGSATPVTTGTAAQGGEAPKVQINLINQSGEQMEAQQGGSRWDAGLSTWICDVVLARARKDRGFRRQLQEPA
1439469..1439813                   PHAGE_Xantho_CP1_NC_019933: hypothetical protein; AruCF_RS06535; phage(gi431811014)     1.16e-11            AchromobacterruhlandiiMATFPSYARIIDAGYSKKSDYGVLRTDMDGGIAKQRPRWTTPIITRAVTILVQSVDDRDAFDAWMADEIGGGAGWFDWTDESGVVKKARLVAGDVSWTTPGVVWTGSAKLETVG
1439815..1440291                   PHAGE_Xantho_CP1_NC_019933: hypothetical protein; AruCF_RS06540; phage(gi431811015)     1.32e-12            AchromobacterruhlandiiMTRSLSSAAARNVLATSAEEPLLAAIEITHPELEVPARFVNDTQDITIEGNTFFACRFDLTLPDDQDEQVPEARLEVDNIGRDLTQWLEQSQGGKGAKCRILMILRSNPGNLEFDMTLDLTGLEITNFRVSGNLGFKNTLMQSAVAVRYDPTTSPGIF
1440293..1440679                   PHAGE_Xantho_CP1_NC_019933: hypothetical protein; AruCF_RS06545; phage(gi431811016)     8.78e-05            AchromobacterruhlandiiMHWSDKYVNQPYVPETGDCAAFAERVAREHLGIAVGLPDGHATALRAQAAQIRAHRGDFAEEVPEPIEGHPVLLRSRGDLFHIGVMCRLANEWWVLHADKGFGAVIRQPLRRMLMVDYKLEGFYQWKA
1440715..1444533                   PHAGE_Xantho_CP1_NC_019933: putative tail component protein; AruCF_RS06550; phage(gi431811018)     2.52e-45            AchromobacterruhlandiiMVVYPKPLGGERSEHFECFAPGETLGAYVRRVGITVPSRVLRVEHNGREVPLALWQRLIPRHGDMVVISARGLGGGGGNKVLRTVALIAVVVVSIVAPYLAPAAWGVGAGTAGGALLSAGIMIGGSLLVNALLPMPTPTAAKLGTGQKYESSPTYSIQGGRNRARPWEPMTLVFGRHKVVPDLGATPWTNQVGDDQYLNQVFNFGLQGMELNLTDFKIGSSPLESYAGVQLQRSAPDGALTMFAGNVDTLQGFALSSNDGWISRTTPPGVGTLSVEIASRLFRVQDDGSLDSRVVDFRIQYREVGAPNWIELGYIGATYATHYWSGRLLPGGATQVRMGSTNRSDHADGELWYETDPTTGEDYRGQWKWVPHPYQLGQPWEGIAPDPILTPGAPGFRMWGNRQEPTRAQINWNVTDGQYEIRVMKVTPDVSDSRESNETAVSQILVHQIDRGDYRGQARVALRIKATGQLNGSVDEFNAIASAVCPVWNGISWATQETSNPAWWFLWFARGRRDQGGQRLFGGGLTDAQIDIESIKAWAVWCTAKSLTFDYVLDQKMSTAAVLQMIARAGRASMTYQTGKLGVVWDAEGIPVTAMFGPFNVKAGSFKVAYLNEGSVDEIVGNFVNAEKGWILDEVRAKVPGALATNNPLQLDLDGCVHQDMAGREANLLAASQVWKRRRVEWETDIEGLVATRGDVVSFSHDLTVWGYSGRLMPGSGGTLMRLQNRVPSGGIGIVLLRDPDGNMKTVSVVSATGEVDELTITTDLDGFPMPGDAGYEDCSPLDWAWQFDPISTPGRRFKITSVMPAGDGLRFEAVDDDPEYYLCESNPYLYTPPKDGTLLAGVIFAASFTEAIRSVQNDDISAQLSWVISTPGRVQINYSINAIAQQPITTEERQTTISAKTGDVIVATIRPVRSTGAGQPFTLTYTVQGLFSPLPPVNGLTAVFRDGLTTLIWSPVVDARNPVYEVRLGTSWSNARTIGVTRNLDMLAVGNGSYFVAARFQLKGTTIYGASDSIQISGAVLVRNVLITVQEDPAWTGALSGGAFVHNNELTLAGTGDILAAPDVIGLGDVLWFGGVQSGGAYTTDVANIIDMGYVAPVRVDFTIDEYALNFSEDFLAIVDVLVEPDVLNGTNRQHYQVRPQIQVAGDDGVYGAWQDYIPGTINARFFNVRLVLETDDPTIVPFVRRFSWTVDVPDLLQSGTALTVPPAGTRVIFPKQFHMKPNLQVTILDAVAGDRAVVRQDVDPMLGFDIQMFNGSTPVERVVNWLAQGY
1444973..1445599                   PHAGE_Rhizob_RHEph04_NC_041908: DNA polymerase; AruCF_RS29060; phage(gi100036)       7.95e-06            AchromobacterruhlandiiMILSTSMTKTLQTSGAWAAGTGNNGLFSGAAATSTWYHVHAIRNDATGAVDIGFDVSPIAANRPSGWTAYRRLGAVFNQSSGGIRPFIQTDDVFRYLVPVNNLNNSALPDTSLTVATVSAPLGVRTRAYLGLTLTAQSAAAFGFVFSPGDTDRSVLAYANVASSPSTVGTGSIFVMTDTNAQVNSRGAGSIPSGFYLSTNGYTDFIGD
1445601..1445948                   hypothetical protein; AruCF_RS06555                                                  N/A                 AchromobacterruhlandiiMPYIDPTGTNPGWSDEPQPGFNLTQFVDEAPPVGAQVPASVSRRQGRLALLEVGRLDAVEGAISAIEDPTKRRAAQIEYEADTWERSNQFLVQLWVDLGGTSAGLDDLFALAATK
1446012..1446320                   PHAGE_Escher_vB_EcoM_ep3_NC_025430: holin; AruCF_RS06560; phage(gi712913194)         2.61e-07            AchromobacterruhlandiiMNIQDFDAFAAKFAGVLGAAVSMRYLQGSWPARLSMAASGSLVAYYASPYLSLLLGIPEGLAGFLTGMFGMAIVSRAWEAVQAAPIGALWQAVIDRVRGKGV
1446322..1446600                   hypothetical protein; AruCF_RS06565                                                  N/A                 AchromobacterruhlandiiMDSTIYLTLWAVLAFVSWLIVAGGAVLAIFSRAIKDTTFERIGLAAVSLTATGAACRIFMAGWASAGDAALAASAAFYVAAVTAKHIRKPTL
1446597..1447088                   PHAGE_Burkho_AH2_NC_018283: lysozyme; AruCF_RS06570; phage(gi399529080)              2.41e-53            AchromobacterruhlandiiMTLDTIVSGALNPALALLPPGMDTPAARVMLLAIGLQESRFVHRRQIGGPARGFWQFEKGSRASRGGVWGVFLHPASKDRLAALCKARSVACDPDAIYSALEYDDVLAAGVARLLLWTDPKALPAVGDADAAWALYLRTWRPGKPHQQTWPDLYRQATAQVQS
1447103..1447546                   hypothetical protein; AruCF_RS06575                                                  N/A                 AchromobacterruhlandiiMAAPWIGGAAVVMVLCAGVVLYGAHRETAGVTKERARAEAAQRAITEAYQLEKDRADAQYRGAVLAREAAKAGLAAARADLDRVLRAAGRDPANPRAGRRPDEAGPDWIGGFAACYAEYGDLAADAAGWADQVNGLQGYIRGLRYAR
complement(1447560..1448051)       PHAGE_Cronob_ENT39118_NC_019934: hypothetical protein; AruCF_RS06580; phage(gi431811067)     1.71e-32            AchromobacterruhlandiiMDLSNADVYVQKSDGSRTGPYRGTLSAKSLIVKNKDFDVEEGDHIVRKLPNGREESYLVLSAQFYNGMGGIPANWQLTIEKTTALRSPNAASSTTVNIHDSTGIQVGNNNLMNFQVAINEMIKKIDDSNSSPEEKAEAKSRLQAFLTHPLVISIAGGIASALI
complement(1448112..1448405)       hypothetical protein; AruCF_RS06585                                                  N/A                 AchromobacterruhlandiiMPFKDPLSAEQLRAIRERQPWNPDVIALLWEVKRLRSVLLRLHQVSGDLKRPPSLMGQIYDDLMEGLAAEPCVIERDQMTAELLEEPRKLRKGMGPR
complement(1448454..1449116)       PHAGE_Burkho_KS9_NC_013055: hypothetical protein gp28; AruCF_RS06590; phage(gi255033760)     2.21e-33            AchromobacterruhlandiiMCSHYQTLKDAELLLKKFGAPNKPAGGKYDMWPRYPGVFIRRPVEHDAGDEAVPELEAVVGRWGLISAMTKADGLDKAGKLSTFNARSETAAKSFTFGNAWRRAQHCIIPADAIFEPDWRSGAAVATRFTRADGAPLGIAGLWDRWRDAAGQLQESYTMLTINADEDPLFRDYHQAGKEKRMVVILPEGAYGDWLTAPADATRDFLVPFPADRLVATPMK
1448810..1448823                   attR                                                                                 N/A                 GGCGCCAGGCGTTG
complement(1449153..1450466)       PHAGE_Burkho_BcepC6B_NC_005887: putative integrase protein; AruCF_RS06595; phage(gi48697215)     3.46e-85            AchromobacterruhlandiiMATKRVLQGLLTDVQIKSWIRAGAPLAKSDGGGLTFTLSKAGTAAWVLRYRMPGRRAEATIGNYPDITLAEARKEASRLRAMIDAGKDPAAEKREAKQKARAAKTIEWLADDYRAKVLRHLAPNSQKLYERQLRRIGKDWRGRAVDGVAPGDVIDLIRKTKDGFATGAGWRETEALYIITREMFKHAAGQHIIQVNPAVGISLESLIGKRPKAKVRLMLTDDELAEVMRATGMNRQNQLSVWIILATCVRVSEFTTALREHIRVDQHTVKRLGAGLWHIPASKTGPAMDIPLAPPVVEWFRELDALALDSRYIVPARSVARLRNGGGDAPVNKDAIWGAIGYWFENAAPNVRPFTPHDLRSTAKSHMRALGVDRDISEMCLNHKLKGVEGIYDQYSYWKERRDALAMWADHLLACRGADVEAAGTARNALAALRAAS

#### region 3 ####
5115577..5115588                   attL                                                                                 N/A                 GGCGGCGGGCGC
5125949..5126767                   PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; AruCF_RS23200; phage(gi971760361)     4.88e-06            AchromobacterruhlandiiMTVKNPVPADIGALPVDLSGKRVIVTAGAAGIGAAIAGAFAARGARVHVCDVDEQALAACPHPHSRADVSRRDEIDRYMGEALSHLGGLDVLVNNAGIAGPTAGIGDIAPQDLEATLDINLAAQFHTVRHALLALREAGGGSIINISSVAGRMGVPMRTPYAATKWGVVGLTRSLAVELGGYGIRVNALLPGLVAGPRIDRVIAARARNMGVTVAEETRLELAGVSLGQFVRAADIANMALFLASPFGAMVSGQAISIDGDLQSLPWQPPAD
complement(5126823..5127752)       LysR family transcriptional regulator; AruCF_RS23205                                 N/A                 AchromobacterruhlandiiMKRNFNIHDLRIFYTVVMTGSTRQAAQAMHLTQPAVSHAISRLEQSTGVQLFDRSHKTLRPTEAGQYLYGEAKFVLDELVRIDEALHSIEQFGGRGLRIACSPALALSYAPDAVRRYLKANGTRPFSLDLESSVQAISAVDTMRADFGLGAVSQQSARLAFRPFLRTEVMAIAHREHCLARGDIVRVGDIRPDSYVQPLWSDYVMPQGDIAESMQLRSGMRAHMSLLAGTVCAVRGVSMVNALSAADIAAAYPELVALPLASRQWFDFVLIARNEAASQEPAERLVEALHAAARERQRGVYEQAIQLLA
complement(5127882..5128478)       PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; AruCF_RS23210; phage(gi255033749)     4.41e-66            AchromobacterruhlandiiMSQPLATVRLYGRLGAEFGRMHRLAVSSTAEAIRALCVLLPGFESRLLDSESKGVRYACFIGRRNLGEAELARPSGTEDIRIAPMPTGAKRGGLMQVVVGVAMIVASFIPVVNAALWASASTSLLTMGMAMTLGGVVQLLTPQQRALSVKDGPNNGASYNFNGPVNTTAQGNPVPVLYGEMFVGSATISAGIYSEDQV
complement(5128475..5128690)       hypothetical protein; AruCF_RS23215                                                  N/A                 AchromobacterruhlandiiMKIRHYEPYAPLRARAYPAIGDQLDAIMKFAAHLQASGQALPAEVTQWVAQCQGVKQRYPKPVIDAEGDAP
complement(5128671..5129036)       hypothetical protein; AruCF_RS29290                                                  N/A                 AchromobacterruhlandiiMKTASFYDAEGRIVGVMTGPLDCVVATGRHNQQFWVEGAGDPDVQCVMDGKLTPRPQSPATLSGLTLTELPVPCFIRIGDSGYPCTERVAELEFAQPGSYLVIVEAWPYLNKEFTVENPPL
complement(5129041..5132664)       PHAGE_Burkho_KS9_NC_013055: tail tip fiber protein gp19; AruCF_RS23220; phage(gi255033750)     0.0                 AchromobacterruhlandiiMKQRHRIRNQAPAGAFSFAGKGRPEEAALVGHKGKGGGGGRTPVESPDSLHSTAYARVIDLLGEGEIYGPVHGMDNALRDVYLNGTPVANADGSLNFTGASIDFRTGTQLQDPLPGFPASESTIGVSAELKSSQPWTRLFTNLQASAVRVTLAVEGLSRADTKNGDINGYRVEYVIELNTDGAGYQTVLSSAFDGKTTQRYARSHRIDLPRARQGWTLRVRRITPNANSNTISDRTVVDTVTEVIDAKLRYPMSALVGIKIDASQFQSIPTRAYHVRGRIIRVPSNYHPDLRSYDGVWDGTFKLAWTNNPAWVFYDLVSNDRYGLGTRVPAGWLDKWGLYQIGRYCDEMVDDGFGGKEPRFTCNVYLQQAADAYRVVQDFASVFRGMAYWANAAVFASADMPGDPVYTFSSANVVDGRFNYVGSALTTRYTVALVSWNDMAEMGRQKVEYVENREGIARYGIQQVEVTGFGCTSRGQAHRIGKWMLLTSNSETRSVTFSVGLDACRVRPGSVIRVADQHLAGRRIGGRIREGSVSKVTVDAELGVRPGDRLTVNLPNGLSETRVVATAVGTGLTVDNTAFTVDSTELTADLVGLPGTVLHITVTTPFSQAPEAECVWTLESEALSAQTFRVLSVKRKQGLVAEIAAVQHEPGKFDNVDFGTRLDPKPITVVPPSVQSAPVNIRLASRSVIDQGIARHVGVISWDAAPSAVAYQVQWRRDNSDWVEAGRTGALTLELPDIRAGAYVARVRAINVSDISSVWANSAETALEGDIAPPPALALLTTKSLVFGIELRWAFPEGRFTAQRTEIWYSASNDRASAIKLGDFAFPQNAHTLMGLAAGKRFYFWGRIVALNGEIGAWYPGDQGVMGESSWEASEILEYLNGKISRDELAQELTGTIDGLTSGLDETRAAITAEETKRADADGALSSRVDTVLAAANGAAAGVEETRNALVDVDGKLKATWSIKAQVAKDGKIYAAGMSAGAYSQPDGSMQTAVYFLADRLALLNQANGATTTPFVIENGQTFINDAVIGTSRITNAMIRSLDAGKIDAGYISVDRLDANALTAKLANLDKAYISRAHIREAQVDTLSIAGNAVTIPVSWAGTNSGSVVLVSNVEGPAVIIAYRGGYPSQPTALRIYANGEEIDRVDPAYTSTTPNEGGGLLYNTMPLSVMAVKTLPAGSSVITVNSAHSYASGAPLRLIVLMTKR
complement(5132661..5133266)       PHAGE_Burkho_KS9_NC_013055: tail component protein gp18; AruCF_RS23225; phage(gi255033749)     1.50e-70            AchromobacterruhlandiiMSDKVRLVRLYGWLGKRFGREHRLAVASPAEAVRALCALLPGFERALLDSERRGVRFACFAGRRNLSEDELRHPVGSDAIRIAPMLAGAKNGGLFQTVLGAVLIAAAAIYSGGLTAAFQAGGLLQATASMGLSMMLSGVAQMLSPQQRQLSARDRPENGASYNFNGPVNTTAQGNPVPLLYGEMFVGSATISAGIYSEDHV
complement(5133263..5134042)       PHAGE_Burkho_KS9_NC_013055: tail component protein gp17; AruCF_RS23230; phage(gi255033748)     4.63e-75            AchromobacterruhlandiiMLKRTMQAIRDHGVATYPQECCGLVVKAGRREWYVPCRNTAASEEHFVMSAEDYAAAEESGRIVAVVHSHPDAPAIPSEADRVACEASGLPWYIVAVEKDFDGRVSAGEIRGFTPEGFRAPLLGRQFAHGVLDCYSLVRDWYARERGITLRDFAREDGWWERGRAGDLYMEHYAEAGFRPLAPHETLAPGDVVVMQVRSDRANHAGVFLGAQPLREAPDLFPLPDAMLHHLYGRDSERVVYGGFWREATRLVLRYGEET
complement(5134045..5134773)       PHAGE_Burkho_KS9_NC_013055: minor tail protein gp16; AruCF_RS23235; phage(gi255033747)     1.57e-80            AchromobacterruhlandiiMGIYSDVQKLEVGALVELFELDATEIGGQVLRFHGYTQVGPVWWQGRQYDPWAIRAEGFEQVGEGQQPSPTLSVGNIGQDGKGKPVVGVISALCIHLDDLVGARVVVRRTLGKYLDAANFPEGNPTADPQEELPPEVWIVQQKTVETAQVVEFSLSSALDFNGQKLPDRPIIAGVCSWLRKGGYRGPYCGYTGSRMFDLDGKPVSDPTLDRCSGLMSDCKKRFGEYEVINFGGFPSADLVRG
complement(5134958..5135296)       PHAGE_Escher_HK75_NC_016160: minor tail protein; AruCF_RS23240; phage(gi356870692)     1.21e-36            AchromobacterruhlandiiMAIETFTWSPRVNPQGRTKFRVLSAQFGDGYSQVAADGINNKVASWPLQFSGAAGQIEPIVAFLDRHQGYRGFQWQPPLGEPGYYTATDYDLTAMGGEMYSLAVTFQQVFRP
complement(5135299..5136582)       PHAGE_Entero_HK140_NC_019710: tail length tape measure protein; AruCF_RS23245; phage(gi428781954)     4.60e-16            AchromobacterruhlandiiMADNNNAANIEAENRALRQNTVELNRNAAARRAWESAVARAATECRKSNDATNKGTDSKKKSTDALNKHAQAIRSEAVEQALAEMKKAGAMLGRSSETAKMEYETEAGRFAGESPSDKYSLTTAAWDLDRLRDQTKMRAYIENLADPDAESRRERTQKQWALDDALRDGTLTQDKYDKERRNLGLVEKDGDFMAKVNDKLIESARNGAGKIQDILGTKMYDFVSEKFDKMGLSFLDNVAKMVTSAASAKLMETLLGKEFMLGSGGVGGWISQAGGFIAGLFGSGGASTASAIVPSVAQAFPVQFAKGGAFTNGMTASPVAFPMGVMGEAGPEAIMPLHRGADGSLGIRAAFPNVGGDTNPVAGGVAVNVYVQDGKVSSSSESGEGGWQQFGQQIGEYVTQLVDRRMTQSYRQGGLAWQANNNRLAGA
complement(5136640..5136930)       PHAGE_Entero_mEp234_NC_019715: tail assembly chaperone; AruCF_RS23250; phage(gi428782266)     1.08e-15            AchromobacterruhlandiiMVLALRLGRTLGELMDTIDTHEVSLWREWDRTSPLGDDRADVLTASLAATVAQAAGAKVRATDMLVRWGAQDEEPPAEAGADALKAFLMSKVRKGS
complement(5136930..5137403)       PHAGE_Burkho_KS9_NC_013055: tail assembly chaperone gp11; AruCF_RS23255; phage(gi255033743)     7.16e-27            AchromobacterruhlandiiMTDTSIHSPARVAGLRGLAVDPLAGFAHETLTVPQWQDARVIVRAPSAGDHLFHIRAIWAAAGVLPGEDNEVVRAKLDAPGVDYTRASASLLVRTLFEQTEQGPRRVFDDEDVDVVAAAYGPAHATLVAKAIELGNLGEGAQARAKKPSRKRQTSVS
complement(5137409..5137876)       PHAGE_Burkho_KS9_NC_013055: major tail subunit gp10; AruCF_RS23260; phage(gi255033742)     4.51e-31            AchromobacterruhlandiiMAGTTVSQFVQTQGTQLEVSTTATEDLGAAGLTYADLAITIKDPNFQGGQTTEIDVTVLKSTAKEYALGLDDSGTFSMAGNWKAGDPAQKALVAARSDKKTRAFRVTFADGAKFEFLGLVTQYQWQGQLDNVVSATFNVRVTGAVKLTDAPANGG
complement(5138128..5138697)       hypothetical protein; AruCF_RS23265                                                  N/A                 AchromobacterruhlandiiMRAPQDWIAAASQAGAAIARSMAARPAPPQAGRQEGARGQQPKGQDMTREESDQVEALIMEWYHWSRGYRPQLGVGRVSAFARGMTSDEAYDDEDVDARLAATRGEQTELCIDELPWQQRSAIGVHAGNKAAGAHVFSNPRLTPAQQHAAYQEAKAALLPALRRRALVTTAQVRHADRAKPCDARGASA
5138995..5139693                   PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; AruCF_RS23270; phage(gi100116)     1.07e-18            AchromobacterruhlandiiMALGKQIRRYRAALGLTLEQLEARTGVGVGTIAALEGRDSERSKYAARLAAGLGLSLEQLLDEAAQYPPDVVLAEPGGDLARAADDAAGDLRIPRFDTGGAMGAGVELRDQPGVIQSLRVSQEWLHKNLRHYTAAANLCVVTGFGDSMRPMYNPGDPLLVDLGVVKADVDGVFFFRVGNEGFIKRLQRIPSAQGLLIRAKSENTKYDAWDITEDMDLQIFGRVLKVWRSEDL
complement(5139788..5141257)       DUF1254 domain-containing protein; AruCF_RS23275                                     N/A                 AchromobacterruhlandiiMRIRRVGVGSSPRPFPGLALCLRGLAVLALIAGASGCSFTSPDAATGSQYVGIDGVAAPEAQRIAKEAYIYGYPMVATYQAIHAASIDAGNPHYQAPFNTLSHAMPDDAAALAPSVDAPVSSAVLDLRAEPVVISVPAMEARRYFSVQLRDLYGFNFAYLGSRVSGHGAGRYLVIGPRWNGAEPKGFTKVIRAETELVSMTVRTQRFAASDLAQFKRIQAGYQVQPLSAYLRKKPAPAPAPVAWIVSAPPAQMRSSLEFYNQLGFLLQFAPVQHGERTLRKRLDSLRIRPGAPVVTESMNPRLRQVMQEGMHDGQNDIDRHRVALAGKTDTLFGDRQSLRHDYLARATGAQVSLGGDSREESMATVLTTDAAGQPLDGAQAYTLRFAPRGLPPVNAFWSVTLYRMPGQQLAPNPIKRHVIDAAMLPTLKRDRDGGLTLRIQHQSPGKGGDANWLPAPAGPFMLTLRYYWPKPALLDGSWQPPQAQRVGL
complement(5141472..5142020)       ureidoglycolate lyase; AruCF_RS23280                                                 N/A                 AchromobacterruhlandiiMTRAAALPVHDLTADAFTSYGWMLGKPIPLGNGVPLFSNEATDFWQEHVFNTGAGGDAEVLWVNYRSAEGEIASLEKHLLTQQAIVPLTGAIIQVVARSAADGSPDLETLAAFRVEPGQGVCMRPGCWHATRVADAEVTCLMLTRRSTTLDLIQHLTTDAAASESAITPIPARQLEGLRLPD
complement(5142017..5142256)       PHAGE_Entero_BP_4795_NC_004813: putative integrase; AruCF_RS23285; phage(gi157165986)     4.36e-05            AchromobacterruhlandiiMSKGFDGVRPASESSIEIGFFYQGRHCVERIRVKPTAANLKRAAGRRAAILAAIARGDFDYDAEFPRRAAASLPAKDPT
5155778..5155789                   attR                                                                                 N/A                 GGCGGCGGGCGC

#### region 4 ####
5489168..5489179                   attL                                                                                 N/A                 GCGCCGGCGGCG
5489403..5490386                   PHAGE_Acinet_vB_AbaS_TRS1_NC_031098: membrane-associated initiation of head vertex; AruCF_RS24895; phage(gi100034)     8.96e-83            AchromobacterruhlandiiMPTFRKRGTSWRAEVARNGHRESATFATKREAMDWANRRELELANARAGKVTRWTLADVMQRYADEVSPEKAGARWEKARIASIKKDKVAKLVMQDIGPAELADWRDRRLTEVQGATVLREIGLLRAIWTRAKLGEWRYVDHDPWPDVIKPKDNPARKIIFTDKQIEDIVSALGYTDGAPKDKREQTAVAFLLALETAMRSGEILTLEWKHVHLERRMLHLPRSKNGDARDVPLSRRAVALLEAMKGIHPEQVFTVNAGLRDAYFRQGKTLAKVDGPTFHDARATAITRLSKKLELLELAKMVGHRDPRSLMIYYRESATEIANKLD
5490389..5490607                   hypothetical protein; AruCF_RS24900                                                  N/A                 AchromobacterruhlandiiMDDNGILEQVPGQYVARAALTLPPAATAEDRDYPVEIDAGHSGLVRITFRRQKARRAKHMHWFWLAQRADAV
complement(5490620..5491066)       PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; AruCF_RS24905; phage(gi100029)     1.59e-07            AchromobacterruhlandiiMQAEFHHGPLPHPEVLRQYDQLSPGAADRIITMAEGEAAHRREMERQQLESDVAHRKTLTAIEQRRIDGVFSSDKTGQILGAVVSCIALLAAAATAIVGLIYGVTSRWYWAIPVALVSLPVLGMVQAIRRRVEPTRGEKAASKPKPDA
complement(5491486..5491947)       hypothetical protein; AruCF_RS24910                                                  N/A                 AchromobacterruhlandiiMALPWIGGAAVVMALGAGVVLYGAHREATGVTKERARAEAAQRAITEAYQLEKDRADAQYRGAVLAREAAKAGLAAARADLDRVLRAAGRDPANPRAGRRPDEAGPDWIGGFAACYAEYGDLAADAAGWADQVNGLQGYIRGLQAGSGRGLGR
complement(5491962..5492453)       PHAGE_Burkho_AH2_NC_018283: lysozyme; AruCF_RS24915; phage(gi399529080)              1.08e-53            AchromobacterruhlandiiMTLDTIVADAITPALALLPAGMDTPGARVMLLAIGLQESRFVHRRQIGGPARGFWQFEKGTRASRGGVWGVYLHQASKDRLAALCKARSVSCDPDAIYSALEYDDVLAAGVARLLLWTDPKALPAVGDADAAWALYLRTWRPGKPHPETWPDLYRQAAAQVQP
complement(5492450..5492728)       hypothetical protein; AruCF_RS24920                                                  N/A                 AchromobacterruhlandiiMDSTIYLTLWAVLAFVSWLIVAGGAVLAVFSRAIKDTTFERIGLAAVSLTATGAACRIFMAGWASAGDAALAASAAFYVAAVTAKHIRKPTL
complement(5492755..5493342)       PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; AruCF_RS24925; phage(gi209552430)     7.66e-75            AchromobacterruhlandiiMKGLGDNIYQRAFVKRLQGPVYLETPWPELYEDLPGVKFVKAETPLRTQAKNMALQQDARWENPPRGSVVTVQYGTAGIVTGMRRCFGVAPGSFDLPDFGPSPVSGRYIVVRPATVRAEWIAEARNPLTMYIAEAAEAARAAGYRVISVADLEAGKEWAVGKLPPADEIYHAGEFNVRQLMALVRNANAVIGGIG
complement(5493354..5493812)       PHAGE_Pseudo_PAJU2_NC_011373: structural protein; AruCF_RS24930; phage(gi209552429)     5.52e-11            AchromobacterruhlandiiMNRDLAESLRGERVGVVSNVFELAPWADFLAANDRAWWRAYPEAMSFAGRRFSSSEFPGVERCRPGNTQWASGVLALQVAVNLGATRIRLYGFDMHGSHYFGEYTNGLVNTKPHRRAVHLQQFRDWARANPSVEVVNCTPGSALDCFRVEAA
complement(5493847..5494176)       PHAGE_Pseudo_PAJU2_NC_011373: putative head-tail adaptor; AruCF_RS24935; phage(gi209552428)     2.70e-27            AchromobacterruhlandiiMEAGRLRHRVAIERFEVTQDPVTGAVTESWTEIAKVWAAVEPLSAREFVQSAAAQSEVTARITIRTREILATDRIIHRGVAYNIRGVLADKDSGLEYITLPVGTGVNEG
complement(5494179..5494553)       PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; AruCF_RS29315; phage(gi209552427)     5.83e-11            AchromobacterruhlandiiMSLVSIEEARMHLRVDSQDDDPWFVTWIPAVENAVFTWLKDSWRAYEPSGDIDSAGNPIPAEDSNGDPIPKFAVKAAVLVELAQQYRYRDGSDAGAVPSHWGYGFVLGAGATSLLSGLRKSTVQ
complement(5494550..5495320)       PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; AruCF_RS24940; phage(gi209552426)     1.82e-07            AchromobacterruhlandiiMSFDPELFGQAMGDAIIKAVQPLKDEIARLKAQLAELPRPLAGKDGTDGRDGKDCDMEAVKKMIDEAVKSIPVVHGKDGADGKDGEPGAKGEDGQKGADGLGMAGAMIDREGALLVTMSNGEVKNLGPVVGSNGRDGSDGKDGVDGLGLEAFELEYLDETHEVRIKASCAGRVKEIRYPAGGIRPGGYWREGTKAKAGEAWVHDGSLWIAKKDTPAKPETAGEDWVIAARKGRDGERGPKGKDAIPEAPIKLKDQA
complement(5495310..5496695)       PHAGE_Pseudo_PAJU2_NC_011373: putative portal protein; AruCF_RS24945; phage(gi209552425)     1.07e-174           AchromobacterruhlandiiMKILGFTFGRQKAMETVGGTWRNAWRIVSEPFTGAWQRNIEEKQGDLITYPTLYACIYRISSDIGKLPFSLRSRDANGVWTEVSNPAYDPVLRKPNGFQTPAQFREYWIITKLTQGNAYILKRRDGRGVVTELYVLDPERVLPMVSDSGAVFYQLQTDKLNSLPEGYPAENLIVPASEIIHDRCMTVHHPLIGVPPLAAAHWPALKNMKIMRSATEFFANNAQPGGLLTAPAGMKEEDAKAVQEYWNKEFSDGKSGKVAIIGADMKFTPFAMKSIDAQMIEQMRYSDEQICQPFGIPPFKVGIGTIPSGLGVDGVNLMYYSDALQAPIQHMEDLLDDGLKVTRPLGIELDTEPLLRMDEAKKADINTKLVGAMIKTPDEGRRPFNLAPTAGGNTLWGQNQDYPLGMLADRKEWDPAMQPTATATPDPAPAPDLDLEELRAFAGTHKAIAAMKKALEPTYVV
5509268..5509279                   attR                                                                                 N/A                 GCGCCGGCGGCG

#### region 5 ####
complement(5516030..5516812)       PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; AruCF_RS25030; phage(gi971760361)     2.27e-11            AchromobacterruhlandiiMLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTAR
complement(5516961..5517341)       hypothetical protein; AruCF_RS29665                                                  N/A                 AchromobacterruhlandiiMNLILILLLAAVLCVPLTQRLGLGAIPGYLLAGVLVGPSCLKLVTDVGDMVNRLMDLDQRDVLAVVVAVSMGVVPILIKLLERVPERLGGMADLPAPAPAETAQDRSDSAPPPRQAEPPDSPSPRP
5517597..5517687                   tRNA                                                                                 N/A                 GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGGTATCCCCGTACCGTGGGTTCGAATCCCACCCTCTCCGCCA
5517627..5517674                   attL                                                                                 N/A                 GACTCGAAATCAGGCGTACGGTATCCCCGTACCGTGGGTTCGAATCCC
5517799..5518041                   hypothetical protein; AruCF_RS29595                                                  N/A                 AchromobacterruhlandiiMSYFTAPIHPGGCWVCTHFHGETTDEGRRPVCRYEPHFPIAPSFPDEGCSHWMREPGADDEIKLSSDREYVATAVFPLKR
complement(5518168..5518422)       PHAGE_Salmon_BP12C_NC_031228: hypothetical protein; AruCF_RS25050; phage(gi100037)     1.05e-08            AchromobacterruhlandiiMQMLLGEFWPYLAGGVAIVLAYFGVRLKGKSDGRQEVQNQINKQAVESAKEARDVQAKIDRMPDGGSMAELRRKWMRKPGTGGQ
complement(5518422..5519021)       PHAGE_Pseudo_YMC11/02/R656_NC_028657: putative endolysin; AruCF_RS25055; phage(gi966197841)     8.12e-43            AchromobacterruhlandiiMQQFNFGAFFRSIFANPFRRGTSSGSESPSSPSASLPASSTSPSSVSQSGLKILKHYEGGRLEAYQDIVGIWTIGYGDTENVQPGMVITQAEAEERLQKRLARDFEPSVCQCLTRAATQYQFDAMVCLAYNIGAVAFANSTLVRLFNAGDIQLAADQFPRWDKAGGKSVKGLRRRRAAERALYLGEPVDKAISIGDKTP
complement(5519131..5519436)       hypothetical protein; AruCF_RS29325                                                  N/A                 AchromobacterruhlandiiMEQPYGDLVSRVSVLERRVDRLYAWGAAAFFTGSLLSGGYIWFGNRSVNQLDQVISSVNSVQTDVLLIKKDADRKDREWSLIRQMVKKGGAPDVSKTLNDE
complement(5519457..5519837)       PHAGE_Ralsto_RP12_NC_041911: hypothetical protein; AruCF_RS25065; phage(gi100151)     1.10e-07            AchromobacterruhlandiiMPYIDPTGVNPGWSDDEQPGMGLTQWSDEIPTIDVFVFSCREFRARVTAEEQAAIRAAAMTDMEVGLVYDDFQSAQAVDLRHPDVIAGLSLFVSKGLLTEARKQELLKPDVVKDLAELMARQKQLA
complement(5519841..5521079)       PHAGE_Rhizob_RHEph04_NC_041908: DNA polymerase; AruCF_RS29330; phage(gi100036)       4.10e-06            AchromobacterruhlandiiMPRNGTGGYSLPNNSWNPAVNGNAATAADWQTLANDIQAAIQQSVSSDGQTPMTGSLKMGGYAITQLGAPTGTGQSLRWEQLIKGSDIASASLITIPNEGSLFDVTGTTTINTLDGSAPGRTVTLRFTGTVTLTNSASLVLPNGKNLIAYPNETYVFCQVTPGVWQFCGGTFMLPSKFRQGGVITTTTNTATVAAGAWRSSANDTNLVLTSAMTKTLQTSGAWAAGSGNNGLFSGAAAVSTWYHVFVIRNTTTGAVDVGFDTSPTAANIPSGYVAYRRVGAIFNQAGGTIRSFLQDGNLFRNTAPIINLNNNGLGAPNTVVVSCPTGVRCLANLTAVVATQATYGTAFVYATDESDRTSDSVASAFGGAGFLTAGHISVLTNTSAQVMMRGTGSIPSGAFLSTNSYVDFIGD
complement(5521293..5523725)       PHAGE_Rhodof_P26218_NC_029061: hypothetical protein; AruCF_RS25070; phage(gi985757619)     2.01e-16            AchromobacterruhlandiiMANEWWASAPQVDPFEAALTLEGVDPKRAAIARSIYQQESGSGRNTTTSNAGAVGGMQIIPATFSRMADKGWNINDPLDNARAGVRYVSKLYDMAEGDPRLTAVGYYGGEGAIPKAKEGIAVSDPRNPNAPNTLQYGDQVAARIPQEAGDSWWANAPVVEEGAATTSRGPDGVLRIEMGGTNPPSPAPEQSALANLKEGATQGFGDMFAGVGQNAVHEGARTLGYIDQLFGTNLADRVKPEVAARDAEVAIREQQYQDKTPGSIAAGIGRVGGNIAAGFAGGPGALSGPMTTAAKLGATLMPNLPRTGAFLGSTLGSAALGGAYGASAPVTSGEYYDQARRNALAGALVGGVTPALGQVVGGAANYLKRNVQAAVAPFTESGRQKIAENLLTRAAESGPQRARTQQFVAGVEPTMAEITGNSRVANLQRTVRDLEPAPFVAREEANAIARQDALSAIRGTSDDLAAAKLARDATAANDYLSTHVGIPVGNTEYASLRKTPAFQSAFAEAERMAKNAGGSVETKVVNRTNLNRGGQAGKPETYVSGVGLQRIKMALDDQINTASRAGERGKAANILQIKDKLLQLMDREIPGYAEARNAYTAASKEIDAMEFIQKLGLTDAQGNVTLAKVQNALRKIEQERMKPGVNQAKAVTSRQMEVLTNLRDDLLRAGQTQAGRSLGSNTAQNLAMQNMMESALPGRAADVAGSAGPATLIGSGLGFVGGGLPGAGGGFVVGRGIDTALSRLMRGSNEDIRNRLAQLLLNEGGSGLATLNRAASAPRPLPGLSRNQGLLYPAFTVGGAIEGLGANGGR
complement(5523725..5525203)       PHAGE_Entero_Sf101_NC_027398: DNA injection protein; AruCF_RS25075; phage(gi849122274)     8.74e-08            AchromobacterruhlandiiMGKGSSSTPEVPDYVAAAKATSQGNLDLAKYATQANRVNQITPWGSLTWSNGRTFNQSAYDQAMDAWRSQGGTNSAVGRDTSPYGYQQAGMHNGTGLSYVDWARQQQQTAGAGAGGMPNPQDYYSGDGDNWTQTVSLSPQMQALFDQNMKLQQGLFGAQPTQQPVTGGQPQVPLLPGRSAQESFTIAQGMGLPAYLKLAAEQGFQKPMVVGEGGTVYNPNTRQAEFSAAKNGIQTMYGPNGPVAGMVPGYGAANAAIQGMEAGATEGAKAAFDLVEVPNGSGGKILMPRAQAAAMLGGQNQAPVQSPNPGQQAGAPGALGTTISPQMQEARSALPKIEQQANQLRDVITKTLNHPGLNYSVGVWGNAPTIPGTPQADVRALQDQIQGATFLQAFESLKGGGAITEPEGKKATDAIARLSRAQSPTAYREALQDLMQVLDVGVARAYKSAGMQQPGAQPDKQDMAMPKSAQDYAALPSGAMFRAPDGSIRRKP
complement(5525175..5525609)       PHAGE_Burkho_BcepMigl_NC_019917: Acyl-CoA N-acyltransferase; AruCF_RS29335; phage(gi431809922)     9.95e-20            AchromobacterruhlandiiMLFADDSVIGPWVCERIGGNWPQGRGKAIGRIKDGRIVGGILYEDFNGANIMCHIAGEGSHWLNREFLWAIFHYPFEYLGASRMTAPVASVNQACRRFVEHLGFTQECVMEDAHPQGDIIIYRLKAEDCRWLELKNGQRIVEHA
complement(5525609..5527168)       PHAGE_Brucel_Pr_NC_019447: structural protein; AruCF_RS25080; phage(gi418487856)     2.05e-37            AchromobacterruhlandiiMISPQRKRAIGYQTAGSVSLPAPVGGLNDRDPLAAMPVTDAVILENWWPLPGKLEVRRGYTDWVTGFSNAVESLFEYSPPNGINRIFAASSGAIYDVTNPGVHGAPLVSGLTSNRWQDAQITTPGGNFLYLFNGVDKPLLYNGTTWASIDGGSSPIAITGVTTTLLVQGCVFKNRLFMVERDSMRVWYLPVNQVGGAATSLDLGAIFQRGGWVVGMFTWTIDAGNGADDHAAFISSNGEVAVYSGTDPSTAANWSLIGLFYLGKPVGRRCAIKYGGDLLVLCEPGVMPMSKALLTSSIDRRASISDKIQNSINEAIASYSANFGWELCLFPEQNALIVNIPAGMGANYQFAQNTFTGAWTKFTGWDAQTFKNTSQGLFYGTSTAVRRAWVGNIDGSSMIVGDALQSFQDFGASAQNKYFTMVRPYVQTNGNPSVLYSVNGDYLPSDPTGTLNFAPPGGMVWGSMVWGAMTWGGQFVQNSNWNTVGGIYRSAAIRLKAQSNSSIVEWASTSYVYQQGGLL
complement(5527168..5528064)       PHAGE_Brucel_Pr_NC_019447: structural protein; AruCF_RS25085; phage(gi418487855)     8.91e-06            AchromobacterruhlandiiMTLLELIRQACQEMALSVPTAVVSSADPQTVQMFALLNRFGMDLCRQDDWQRLNREYIMTTVAQQQNATIVNGSPVITVASTSGMNTNWGIDGTGIAPFAQIVSVDSPTQVTMNMPAQASGTYLLNFAQVQYPLPSDWKKQIPQTEWDRTNRWPMMGPQTPQAWQSFKSGIVYAGPRERFRILGQTMAVNPPPPNGLTFAWEYISNAFVTSASGARKSSFTADDDTCVFDDSLMVQGLKVKFKQAKGLDVSFELSEFNVLLEQCKAQDRSAAKLNLSPADITVLLTTNNIQDGNWPAS
complement(5528067..5528624)       PHAGE_Myxoco_Mx8_NC_003085: hypothetical protein; AruCF_RS25090; phage(gi15320620)     1.35e-28            AchromobacterruhlandiiMNFTQEDHAFVEFYMDPVELTYETEAQGHPVYKEVEHIKIMTPGDPHNIIERRATDADKVKYPRAWERFLRTEHTAHDGLPLEQWPQINRAQVKEAKYFEVHTVEQMSGLADSHLGKMPPGFRELRSKAQAYLKAANDTAAATAQAAEAERLRAEVADVRAQLAEMQKQYGEPAKRGPGRPPKAE
complement(5528683..5528874)       hypothetical protein; AruCF_RS25095                                                  N/A                 AchromobacterruhlandiiMPIEVVSRVTVVNLGANALLVYPGTGVQINALTATTGGFSVPAGKVADFIGVSPTQWVALLGA
5529042..5529317                   hypothetical protein; AruCF_RS29340                                                  N/A                 AchromobacterruhlandiiMARKKWTPAEEAAVAKFYPTTPTKVIAAAVGRSESSIYQLAQRLGLKKSNAYLSSPDAGRFDGTRGEACRFPKGHEPWNKGVSFQPGGEER
5529520..5530056                   PHAGE_Aeromo_Aeh1_NC_005260: hypothetical protein; AruCF_RS29600; phage(gi38640012)     1.99e-19            AchromobacterruhlandiiMRTADVDLITADKVECISFAENMRRNTLHRYPKDIDGVLNSTRSAVAFGGCPWPRNRNMDGAWDKFDQVAVKLMARLVAETEAHVVLSSNWRIGMDQERATELGDFLGYVISSATPGGGGERGPQIQQWLNEHPGVEKFVIIDDDSDMLPEQLSHFIKVDPAIGLTYQNYQDAKQLLK
5530137..5530502                   helix-turn-helix domain-containing protein; AruCF_RS25105                            N/A                 AchromobacterruhlandiiMDQPVSEPISALEAARLLGVSPRSVYDLAAPDGPIPCYRVGRRISFELTDLLEYRQSCRSIATQNAVSSSLNSTAPSRVKGSGLVAVFRKHGLEPKQTPMTGRNPHASTPSRPALRVIGQR
5530517..5531269                   PHAGE_Azospi_Cd_NC_010355: integrase; AruCF_RS25110; phage(gi168495175)              6.84e-08            AchromobacterruhlandiiMYLEDKKHLKTYKEVMRVFSSLYGYYQGKFLDELPEICSEVAKQAKAPASIKYEISLLRAAGRWAWKKHNQGEHDPGARVQVPTVRNERHVYVTFEQVLGQLRHCRNKGARQAMVAGFFTGMRLSELLRARIEGDSLVVYDTKNGDAIKRVPIHPTLKRYMDRHGWPIEAAKSTIQKWSRVSRAKVGLGHVTFHSLRHSTASALINADVDLFTVGAILGHKDPRSTKRYAHLDQSRLTDAIAKMGQKKRA
5531374..5531421                   attR                                                                                 N/A                 GACTCGAAATCAGGCGTACGGTATCCCCGTACCGTGGGTTCGAATCCC

#### region 6 ####
6167803..6167814                   attL                                                                                 N/A                 CGCTGGCGCTGG
6168016..6168990                   PHAGE_Gordon_McGonagall_NC_030912: exonuclease A; AruCF_RS27930; phage(gi100018)     1.62e-15            AchromobacterruhlandiiMQDPAPDAPLPDPMAAWLRHLESNRRYSPHTLDGYRRELRFLHALAKRARLPLDQLGNGHIRQFVARLHAQGRGPRSLARTLAAWRGFYQWWAPAIGLAGNPVAGVRAPKAPRGLPKALSVEQTQALLDRAPAKVATEPAALRDQAMFELLYSSGLRLSELVGLDLRYTRSADHESRGWLNLDEAEVIVLGKGGKRRSVPVGQAALAALRRWIEARPQLAPPAASADDAAALFLGARGRRISPRVVQLQLAHIAQAAGLPTHVHPHVLRHSFASHVLQSAQDLRAVQEMLGHANISTTQIYTRLDFQHLARAYDQAHPRAGRKS
complement(6169004..6170155)       nickel transporter; AruCF_RS27935                                                    N/A                 AchromobacterruhlandiiMPVARGRPPTVTLAWLLALFVALAWAGEAAAQGAHPFGVPESGGAGLGGPGWLAGFFGQVSAWQTHFYRQLTAAVRAWQADGGGWLLIGLSFAYGVFHALGPGHGKAVISSYVLANRQTARNGALLALLSSLVQALVAISMVAVLALVFNATAASMNQATRWLELASYALVTLLGAWLVWVKAIRPLWRRRSSAARVASAPARPAAPAVAGGPGLKGAAALRAITVQAAAPRAQPALHEHAHVHGHHRHDHPHHDDACGCGHAHVPPAEQMAGPLNWRRAGSAILAVGLRPCSGALIVLVFALSQGFYLAGVASALAMGLGTGLTVAALACLAVAAGGAADALGTRLSSAAAARLRYAVEALAALAVLALGVLLLGGMLAGGG
complement(6170146..6170829)       DUF1007 family protein; AruCF_RS27940                                                N/A                 AchromobacterruhlandiiMERTSARRGLAALSAMAGALAATAASAHPHMWIDARAVIDLDEQHRVTAVRQVWQFDEMFGAYATQGLKKGKGGTLPDDTLKGMAQDWMKALGEPVSHYFTRVTVAGKSAAFAAPRDARVTWNPKTGRLALAFTLPLAEPVAPDAAGAQVDIYDPTYFVAYAFDEKGAVALEGPGAAACKQAYRKPKELDWNTMQQLAAIPADPEALPEELFAITKGLTHRIEVQCP
complement(6170790..6171785)       metal ABC transporter substrate-binding protein; AruCF_RS27945                       N/A                 AchromobacterruhlandiiMRSILPALSRRRALLAAAGLWLSATFGAAHAAEPLPVVASFSILGDIVREVGGADVRLDILVGPDGDAHEYEPTPGDAKKLAAAKVLFVNGLDFEAWLPRLVKASGFNGATVVASRGVTPRKFAGHGDKEHGHGADHHDHDHGHAHGADDGHHHHGDADPHAWQNLANGVIYARNVAEGLAAADPAHADAYRKRADAYVARLQAADAAARKTFAAIAAERRKVVTSHDAFGYFGDAYGVDFIAAMGISTAAEPSAGDVARIIEQVKRDKVPAVFVENITSPRLVQQIARETGAKVGGTLYSDALSKPGQPGATYLEMFEWNVRQLAAALQP
complement(6171804..6172670)       metal ABC transporter permease; AruCF_RS27950                                        N/A                 AchromobacterruhlandiiMTALQWAVAPFLDYGFMRRALAGASALSLGAAPLGVFLVLRRMSLMGDAMSHAILPGVAAGFLLSGLSLGAMMLGGIVTGLAVALLAGLVARLTPLREDASFAAFYLISLGLGVLLVSLRGSNMDLLHVLFGTVLGLDDDALLLVTATASVTLLALAGLYRLLVAECLDPGFLRASGGRGGWVHMSFLVLVVVNLVAGFQVLGTLMVVGIMMLPAAAARFWMRSAAGQIPLAAGIGVTASIVGLLVSYHFNVPASPAIILAAGVCYLFSIVGGPHGGLLRASRRSRRA
complement(6172667..6173389)       PHAGE_Bacill_G_NC_023719: gp245; AruCF_RS27955; phage(gi593777701)                   2.94e-18            AchromobacterruhlandiiMKAAPVAIELCNASFGWHGHTALRGISGRFEPGAMTAVVGPNGAGKSTLIKGIMGVLRPMAGSVTIGGAGRSELAWLPQAAELDRAFPAKVLDLVALGAWRRVGSWRRYGREEIDRCMHALETVGLADMAGRGIDTLSGGQMQRTLFARMLVQDAPVLMLDEPFTAVDSHTADELMALLCDLHGQGRSVIAVLHDLDLVRDHFPQCLLLSGSVVAWGETGMALSETHLRTARQWHTRAFA
6173727..6174230                   transcriptional repressor; AruCF_RS27965                                             N/A                 AchromobacterruhlandiiMPAPPRSPRTDTVGAQLSVAEALCEQRGRRLTPIRRKVLELLLRHGRSLKAYELLDAMREVHPGAAPPTVYRALDFLMDEGLIHRLDAVNAWSACHDVGGAPHDLLVVCTACGAVAEISDPAMSRQLAERVAQTGYVLATHETEIRALCPQCQKKQPADAGHHHHHH
6174606..6175736                   GTP-binding protein; AruCF_RS27970                                                   N/A                 AchromobacterruhlandiiMNTPRSLDKMVPVTILTGFLGAGKTTLLKRILTEFHGRRVAVIENEFGPESIDNDLLVQDSDEEIIELSNGCVCCTVRGDLMRTLSDLRAKREAGALNFERVILETTGMANPGPVCQTFFMDDDIAEYYRLDAVVTVVDAKHGMATLDEQPEAQKQVGFADRILISKKDLVNDVDYEALRNRLLRMNPRAPITPVNFGDADLKSIIDISGFNLNSILDIDPDFLADEHPDAAHSHAHGHGHDHDHGHDHHGHDHDHDHDGECGAHCNHAHHHHPKHDDEIGAFVFRSNKPFDPARLEEFLGGVVQVYGPDLLRYKGILYMKGINRRMLFQGVHMMMGAEPGKPWTAAEKPSTKMVFIGRKLPQEIFTRGLEQCLAG
6175863..6176327                   RNA polymerase-binding protein DksA; AruCF_RS27975                                   N/A                 AchromobacterruhlandiiMATKAATKKSSKSTSDTAIDLPSEKELLAMPESDYMNERQLAFFKERLKQLEQDILANAGETTEHLRETQFVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIARIDSGEYGWCEETGEPIGIPRLLARPTATLSLEAQERREMRQKLYGD
6176543..6177082                   PROPHAGE_Escher_Sakai: ATP-dependent protease peptidase subunit; AruCF_RS27980; phage(gi15834113)     6.32e-76            AchromobacterruhlandiiMEQFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTLQERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPEHGLAAIGSGGAYAQSAALALLRNTDLAPETIVKQSLEIAGDLCIYTNQNHVIETLGD
6177157..6178491                   PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; AruCF_RS27985; phage(gi15834112)     0.0                 AchromobacterruhlandiiMSASNMTPGEIVSELDKYIVGQNRAKRAVAVALRNRWRRQQVAEPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPFIKIEATKFTEVGYVGRDVDTIIRDLTEYSIKQTRELEMRRVRTQAEDAAEDRILDALVPPPRGASGEPERGEDNSARQTFRKRLREGKIDDLEIEIEVAQAAPQMDVMTPPGMEEMAEQLRGMFAGLARDKKKSKKMKVREAFKLIVDEEAAKRINEEDLRTVAINNVEQNGIVFLDEIDKIAARQESGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHILFIASGAFHLARPSDLIPELQGRFPIRVELESLTAEDFVRILGDTDASLTKQYTALLATEDVQLEFTDEGVRRLAELAYEVNETTENIGARRLYTVMEKLLDELSFDATASSNKTVKIDAAYVNAQLAEAASSQDLARYVL
complement(6178654..6178959)       copper-binding protein; AruCF_RS27990                                                N/A                 AchromobacterruhlandiiMAFNRKYTTPMAVATAMAVVSLATPLAFAQQADASGEVRRVDPGAGKVTIKHDAIKALDLPAMTLVYDADPALLAKIKAGDKVRFTAERKDGKYVVTSITN
6179101..6179664                   cob(I)yrinic acid a,c-diamide adenosyltransferase; AruCF_RS27995                     N/A                 AchromobacterruhlandiiMANRLSVIATRTGDDGSTGLGDGSRVPKDAARIAALGDVDELNSVIGLLLTEPMPADVAADLLTIQHDLFDMGAELCIPGHVALADAQVAHLDARLAHYNAALPPLREFILPGGSRAAAQAHLARTACRRAERAVVALAREEAVNAPVRQYLNRLSDLMFVLARYLNREAGRPDVFWTSRVSRLDTQ
6179920..6180981                   PHAGE_Entero_phi92_NC_023693: Phi92_gp067; AruCF_RS28000; phage(gi726647000)         1.71e-106           AchromobacterruhlandiiMSIIVTGGAGFIGSNFVLDWLAKHDEPIITLDKLTYAGNPNNLASLNDDPRHQLVQGDIGDAALVSRLLDQHRPRAVVNFAAESHVDRSIHGPGVFIQTNIVGTFQLLESVRSYYGGLDSAARQVFRFLHVSTDEVYGSLAKDDPAFNENNRYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLIIHNALAGKPLPIYGDGQQIRDWLYVTDHCSAIRRVLEAGKIGETYNVGGWNEKTNLEVVHVLCTLLDELSPRPDGKSYASQITFVQDRPGHDRRYAIDATRLQRELNWTPEETFETGIRKTITWYLQNQEWVRNVTSGAYRDWVNKQYQA
6181175..6182074                   glycosyltransferase; AruCF_RS28005                                                   N/A                 AchromobacterruhlandiiMCTYQGEKYLASQLDSFAVQSHPDWVLAVSDDGSTDGTRAMLSDYQQKWGAGKLSVFEGPRRGFVGNFMALTCNPKVQADFYAFSDQDDIWHHDKIQNAVDWLKTVPPNTPALYCTRTQLVNEEDQATGLSPLFCRPPAFENALAQNIAGGNTMVFNDAARRLLLQAGPQVDVAAHDWWVYLAVTACGGRVHYDPRPSLRYRQHNSNLIGANRGLLARFTRIRMLFRGHLKDWNERNIKELTKLRDRMPLANIQRLDQFSAARASGLWRRILRFKSTGIYRQTALGNLGMIVAVIFNKL
6182082..6182984                   PHAGE_Entero_phi92_NC_023693: Phi92_gp064; AruCF_RS28010; phage(gi726646997)         1.05e-37            AchromobacterruhlandiiMKILLLGKDGQVGQELQRTLLPLGDTLALGRSEADLSDLPELRATLASHGPDIIVNAAAYTAVDKAESEPEAAARINMDAVSVLAQYAKTNNATLVHYSTDYVFGGTGETAHVETDLTSPQSVYGTTKRDGETAIIESGCRGLIFRTSWVFSSQGGNFLKTILRLAATKSELKVVADQYGAPTSAELIADVTALAIHGSRQGRLPNGIYHLAASGATNWCEFARYIVSQARAGGLELQLTADQIHPIPASEYPTPAKRPQNSRLNTDKLSQALQLRMPHWTLHTDRAIDQLIRLGNQKNA
6182977..6183855                   PHAGE_Entero_phi92_NC_023693: Phi92_gp066; AruCF_RS28015; phage(gi726646999)         1.87e-131           AchromobacterruhlandiiMRKGIILAGGSGTRLHPATLAISKQLLPVFDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGKQWGLNLEYAIQPSPDGLAQAFVIGESFIGNAPSALVLGDNIFYGHDFQRLLESADARTEGASVFAYHVHDPERYGVAEFDAQGQVLSLEEKPARPKSSYAVTGLYFYDNDVIDIAKSITPSARGELEITDVNRAYLENNRLAVEIMGRGYAWLDTGTHESLLEASQFISTIENRQGLKVACPEEIAFRQKWISSEDLEKLAAPLEKNGYGQYLKRLLVEKVY
6183855..6184403                   PHAGE_Entero_phi92_NC_023693: Phi92_gp065; AruCF_RS28020; phage(gi726646998)         1.10e-60            AchromobacterruhlandiiMKAIVQSIPDVVVFEPRVFGDSRGFFFESFNRRAFEDATGLHREFVQDNHSRSSKGVLRGLHYQILQAQGKLVRVSEGAVFDVAVDMRQSSSTFGQWVGTILSAENKRQMWVPEGFAHGFLVLSDHAEFLYKTTDYYAPQHERCLMWNDPAIAIDWPLQGSTPVMSDKDLKGKGFAESEVFP
6184400..6185413                   PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; AruCF_RS28025; phage(gi100085)     9.24e-37            AchromobacterruhlandiiMILVTGGLGYIGSHTCISLSNAGWDALILDNLSNSKVAVLERLREICPNTVEFEKGDIRDKQMLASLFAKHDIRAVMHFAGLKAVGESTESPISYYDNNVVGTLCLLEAMTSAKVKTLVFSSSATVYGDSCNVPIPESSARSATNPYGRTKLFIEEILSDLKASDDQWRIARLRYFNPVGAHESGRIGEDPTGVPANLMPYIAQVATGHRDFLNVFGGDYPTSDGTGVRDYVHVMDLAEGHVAALARLQQHPEMLTVNLGTGRGTSVLELVSTFARISNRQIPYRIIGRRLGDAAQSYAAVTHAEQVLGWKAKRQLTDMCADHWRWQIENPNGYPES
6185425..6186246                   ABC transporter permease; AruCF_RS28030                                              N/A                 AchromobacterruhlandiiMQQYSSSGREIFASLWRNRSLVLALTKREIIGRYRGSVMGLAWSFFNPILMLSIYTFIFSVVFNARWGTNTSGSKTEFALILFVGLIVHGLFAECVLRAPSLILSNVNYVKKVIFPLEILPWVAFSAALFHTCISLIVLLVARILLQHELPWTVVLFPLLLVPLVLGTLGVSWFLSALGVYVRDIGQITSMLTTILLFMSPVFYPISALPEKYRLLVNLNPLAYLIEESRNLLIFGVLPDIRHWAVLMILSSAVAWLGFFWFQKTRKGFADVL
6186236..6187597                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; AruCF_RS28035; phage(gi371496158)     7.89e-05            AchromobacterruhlandiiMSSDIAIKIDGLSKSYHIFDKPRDRLLQMLFGKYKQYYKEFWALNTLSLEIRKGETIGLIGRNGSGKSTLLQLICGTLNATTGTITTNGRVAALLELGSGFNPEFTGRENVYLNAAMLGLTEAEITERFDDIAAFADIGDFIEQPVKTYSSGMYVRLAFAVVAHVNADILVIDEALAVGDAVFTQKCMRFLRRFQENGTILFVSHDIGAVTSLCQRAYWLDKGVLRMSGTPKDISAAYMADIYEAQQGASATPPRKQANTETSPAQIVEPAPAVFRDMRLDFVQHTQFRNDIQLFTFEENAKAFGKGGASIENVQLRDTEDRPLQWVVGGERVKLHVSCRAHQDIHSPIVGFFIKDRLGQVLFGDNTYLSHMDSPLSVPANQAFSATFAFPMPILPVGDYSINVALAEGNQQDHVQHQWIHEALIFRSTSTSITTGLVGVPMEAIQLKLSDGN
6191500..6191511                   attR                                                                                 N/A                 CGCTGGCGCTGG
