Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1206209158 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1206209158.PHASTER.zip
gi|00000000|ref|CP021759.1| Klebsiella pneumoniae strain AR_0138 plasmid tig00000002, complete 46161, gc%: 46.65%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
| Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
|---|---|---|---|---|---|---|---|---|
| 1 | 19.8Kb | incomplete | 30 | 7 | 20302-40172 info_outline | PHAGE_Staphy_SPbeta_like_NC_029119(2) | 49.19% | Show info_outline |
Region DNA
>1 20302-40172 GCAAAAAACACTTGGCCATCCTCGCCGGTCGTGAAATTTTGCTGGCATAAGAAATAATCCCCCCGGTATG AGGGGCTTGTCTGAAAGGTTAGTGGTTGGGCTTACTGAGAGTGAACTGTAACCCGGCTACTGCTGCAAGC TGTGCAAGTGTTGTGATGGTCGGGTTTCCGTTCGGGGATAATGCGCGGTAGATACTCTGACGAGCAAGGC CGGATTTTTTGGCCGCCTCTGTTATACCCCCTGATTAGGGATCAGGTTAAAAACGAGCTGTATGACGTTC TAAGCGCATTTTACCCGCTCCGTTGAACCATGACCGGGTTAAAGCGGTTAAAACGCCTCTGAGGGCTTTT GAGAGCATTTAAGAATTGGATCGGAAAAGGATCCCGTCTGGATCTTTTAGAGAGATTACACCGCTCGCCG CAGCCGAACGACAGGGCGAAGCCCGCGAGTGAGCGAGGAAGCGGAATTTCCACGGGGTTTCAATAGAGCA CTTACGCGCTAAGGTTAATATTTGCTCAATTTTTGGTGGTGCAGTGCTCAGGGAGGCCAGACGGATCTAT CCTCTGGATTTATGCTGAGTTATCCACAGACGCTGTGCATTAAAAGCCTTATATTTTCTTCTTGATCTTA AAAACTTAAAAACTTAGCTCGCTTCAATTACCTGAAAATTATGGAAAAAAATTGCTAAAGGTGAGAGGAT TTTTCACGTAAGGTGAGAGGATTTTTCACGTAAGGTGAGAAGATTTTTAAGTTAAGGTAGTTAGATTTTT CACTAAAGATGAGAGGATTTTTCACGTAAGGTGAGAAGATTTTTAACGGTTTCCACAGTTTGACTGAACA TCAAGTGAAACATGCGGTTGTTGCTATCTTTAGATATGAAGATCCTCAGATCTTCATATCTAAAGGTGAG AGGTTTTTTAATTAAAGGTTGTATTGTTGTCTTGAATTACAACCTTTGTGGGGTTATGATTTGCCTACAT AGGAAAGGTTATATGAGGCTTATCGTGAAGACAGTAACGGGATTAACGAAAGTTAGACATAGAAATGAAG TTGGGGTAACTCTTGCATCCCTTTCCCTTTCAGCAAAAAGAGTGCTTTTTCTGGCTCTTTGCCAGATTGA TACAAAGGAAATGTTAGATGATGATATTTTGGAGGTTGATGCTGACTTTTTTTCAAAAGCTACTTCTTTA GATAAATATGCCTCTTATGCAGCTCTGAAAGAGGGAGCTAAAGTTCTTTCTTCAACTACGTTAGTTTTAA ACAGAGATGATTTAAAAAATTTGGCTGATGAACTTGGGATACTATCATCTAAGAATAAAATACCTGATCG CTTGGATTTAAACTTAACAGAATTCTGTGCCTATTACGATCATCTTGCAACTGTACGGATAAAATTCACA AATACAGCTAAGCGATATTTTTCTAAGTTGATTGGTTCTGAAAATAGATATACCACTCAGGTATTGAAAT CAGTTGTGTTGTTGAACAGTGTAAACTCAACAAACCTTTATCAAGTCATTAGGAAATATTACAGTCAGAA TAGTTCAAAAAAATCTTTTGATATATCCGTGGATGATTTAAAAGAGGAAATGGGACTTTATACTATTGAG GAAGGGGAGAAGAAATATAAGTATCCTAAATACTCATTTTTTGTTCGTGATGTTATCAATAAAAGCATTA ATGAGATAATTGAGAAAACGGAAATAAATCAGTTATCTTTCTCTGTTGTTGGGAAAAAAGGGAGAATGGC TCACATGCTTAGATTTGAGTTTAGTATAAATGAAAAATCCTCATCCTTTTCGGAAGATGATATGGCATTT TTAGAGGAGTTTGACAAAGTCGTTCCACCAAAAAAGAATAAGTGAGGCAAAACATGGCTAAAATATATGA GTTTCCGCAGGGAGCCGAACGAAGTAAGCTGAAAAAAGAAATCATCCGGGAACGTAAAAAACGATTGCGA GAAACGAACGGTAACCCGGTTATCCGGCACGCTAAATGGTTCTGGTTTTATCTACGTCTTGCTACGGCTG GCGCACTGCATTTAGTCTCTGTTATTTCTCTGGCAGTCCTGGGGGCTTTCAGTAAAGCTATTTTCTGGAT TGGTGGAATGCTCTGTGTTGTTACATGGTTCCACCTTGAGCGCCAGTTCTGGACGCCGCAAAATTTCACG ATTCCAGTAATCGTAACGCTGTGGGGATTGAGTTTGTTTGCCACTCCCCTGATGGAGCTGCTTAACAAAA AAATGCCGTGGTATCGTCTTCTGGTTCCTGATGCAAAGCACACTAGCACTGAGGCAACCAATGATGATCA GCCGTGAAGCAACAATGTTATCCAGTCGGCTTGCAGTGCTTCTTTCAGCCTTTTATCATCGGTTAATCAT AGCGCACGAGGCGAGTTCTTTTCACTGCGATGCAGGATAGGGCAAACGCCGCAAAATGACGTCTCTGACG CCATTCCGCAACGTTTGCCCGGTGACCTACAGTCGGTTCTTGTTGGAGAGAGTTATGAAATATCAGGTTA AAGAGTTTATTAACGAAAAATATTCTAAGGCTGTTAATATTTTAAAGGATAACCTTAAAGAACACTACCA TATTTTTTATGGTTTGAGATTAAGTGAGATTCTTTTTCCTGCCAGCGAATACGGCTCTGAAATGTTTTTT CAGGAGTTTGAAGCGATTAACAGTGTAATATTGCCTTTGGTGATTTTTGATTTGATAGACCGAAAGCCGA TTATGGTTATCGGCTTCGGTGAAGTATGTGGAGTTGATTCACTTGTTGATTCTGGTATAGAAGTTGTTTC TTTAGACGGTTTAAGCGATCTGCTACTGGTTGAAAAACTGACGCCATTATTTAACTAAACCTCTGGATAA CTATCTTTTCAGTTTTCCAGTAAGATTTTTTCTATATCTGAAAGCACTATTTTTTCAATGCTTTCTATAT AGTAATGCTCATTAAAACCTGTCATTTCTGTAAATTTTAGCTCTGCATCATCTTTCGAATAAGCAATAAC AACTCTGAAATCATTTTCCCACAAATCCCACCTGTATTTGTCTTTTATACGAACCCTGTACAATCCTTTT TGGATAGTGCCATCTTTTTTCTCTTCCTGTACTTTTTTTAATTTTTCATTTTGCACCTGTTGTTCAAGCC ATGATTTATTCATAAATCCCCCACGGTTAACGTCTTTAGGCTCGGTTTTTACTTAACGAAATCTTCCGGT TTTACACCTGTTTTTACCTTCATATACTTGCCCTCCCCCCTTAGCTTCGGCTGAAGTTCGGTAAAGTACC ATCCGGCAACGGTAATAATGCCTAAAAATACAAAAATAGCAGGCTTCAGAACATCAATAGCTGATACAGC GCATAACTCAATATTGAGATTAGTACAAGTTCCCTCATCAGGTGCATAGAACCCCCATAAGCCTATACCT ATAAGGAACATCCCCAATATCGGTTGGATGTATAACAAGTAGATATTAATAAGAGTTTTAATATATCTGA ATATGAACATTTTTCTTTCCTTAGGTTTCTTTCTATTTTGGATTTCCAATTCTTAACCAATGTGATGGTT CGACAATCCATTCTCCGCAGTCATAGGCAACGGCCTTATTATGCCTGTTAGCGAACCATACTAACCAGGC TAATAATCGCTGATTGCCGCTGTATTTGGTTTATCTCTAACCATCACAACATATCTCTTTTTCTTAGCCA TAACGCTACCCTAATTTTGCAGATTCAAGCAGCCAGTGGTTTTTCAGGTTCTCGTCCAGGTTATCGAATG CGGCCAGCGCTGCCTTTAGAACGGTTGTCTTGCTCTGGCCTGTTCTCTGCGCCTCCGCTTCCAGGATCTC CTCAAAGTACGCTGGCAGTCTGAAGTTCATCAACTTTGGTTTACCCGCTACAGGCGCTCTGGTAGCGCCG GAGATAAAACGCGCGGTTTCTGCGTTTGTTGCTGGTTGCTGAGATTCATCGATGTTCGGGCGGTTTAGTT TTAAAGCCATGAAAATTTCCCCTTGTACGGTATGCATTAATTGTAAATATCATAGTATCTTTATGGTGTA TTTACAATGTAAAGATTTCGATGAATATTGTTGATATTTCTATAAAATGCCAATTTCCTGTGCCACAAGT TCAATCTGTGCTTTCGCTGTTGAAAGGCTCGATGCCCGGCTAACGTCATGTACCCCTGCCCCTTCATTAC AGGCGCTTTCATACACATCCAGCTCGGATATCCGGGTTTTCAGAGGTTGAATCCAGATGTTGTCCGAACG CAGTAATTTATCCAGATCAATGGCCGCTTTTCTGTGGCGGGGTTTCGCTGAGTTGATTCTGGTGAACAGC ACCCACGGTTCCAGAGCTGCGTTAGCTTTCTGAGCGGTGCGGATTTTCTCTGTAACACTGGTCAGTGTTT CGCTTTCGAAATCAGAGGACGGCTTAACCAGTGTCACCACGATATCTGATACTGTCAGGGCGCTACGGAA CTCCTGGCTGTCGTGGCCGGGGCAATCGACAATGAGAACTTCACACAGCTTACTAAGGCGCTTAATTTCG TTGCTGACGTTTCCGTAAGCTGCGTGAACCGGGATAGTGAGTAAGCCGTTATCTGTCCGCTTTTCGTTCC AGCTCAACAGATCGTGGTTTTTATCTGTCTTCAGGATAATTACCGACTTACCTTTGTTGACCAGCATTGA GCCTGTGTTAGCCACGTAGGTGCTTTTGCCTACCCCACCTTTATCTGATACGACAAGCAAGATTTTACCC ATTTCAGAATCCCTCTCTTTATGTTGTAAAGCTCATGTAAAGATATGAATGTCTTTACATGGTGTGTTTT TCGTAAAGATACTTTTGTCTTTACAGTGTCTTTATAATGCAATGGCTTTACCATGTAAAGCACAAATAAA GATATATTTATCTTTATGGTGTCTTTACATGGTAAATGTTGCTGTGTCTTTATGTGCGCTTTATGGTGTA AATCTTGGTGTGTCTTTACATCATCTTTATGTTGTAAATTTTTAGTGTGACGTTGTCACTATAGGGCTGG GGTCTGTTTGCTGGTTCTTTTTGAGTGTGCCTTCCCTGAACCAACTGAAATGGGTACTGTATGGGTGTGT CTGGTTAACTCAAAATGAACTGGTTCCCTATAATGACTCAAACAGTACCGAAAGGCTTTGTCAGAGCTTA CTTACGCGCATCCACGACTGAACAGGATGCAACACGCGCCCTGGACACGATAAATACCTTCGCCATCGAG CGCGGCCTGAGCATCTGTAACTACTACATTGAAAATGAATCAGGTTCTAAGCTTGAACGCCCTGAGTTGT TCCGGCTCCTGAAAGATTGTCAGCAAAACGATATCTTGCTGGTAGAGGATGTGGACAGGCTTTCACGCCT GGTAGGGGAGGACTGGAACACACTGAAGAAAATGATCCGGCAGAAAGATATCCGGGTTGTGGCCGTCAAC GTTCCGACAACCTGGCTCGCATCGGGTCACAATGATTTTGACAGCCGAATGTTTTCGGCCATAAACGATA TGTTGCTGGATATGCTGGCCGCCGTCGCCAGGCGAGACTATGAACAGCGCCGGGAACGGCAGCAGCAGGG GATCGCCAGGGCGAAAAGGGAAGGGAAGTATAAAGGCCGCCAGGTTAATCAGTCTCGCTATGACGCCATA AACAGGCTGATTGCGAGCGGCAGCTCCTGGAGCCAGATTCAAAAAGTGCTGGGTTGTAGCCGGGCGACTA TCAGCAAAGCTGTGAAGCAACAGACCGTTAACAAAATGAACCATGAACCTGAAGGTAGGGAGTAGTTACA ACATAATAAACAGTGTGTTGAAGAATAAAACTGATTCTTTATACTGTATATGCATGGGTCTTCCCCGATC ATGGTGGGAAGGCTCAGAACGCCATATTCAGCTTTCCGTAGTGGAACATCACCCCCAGTTTAAAGCGCTC CCGGTTTCGGTATCCCCTGGCTTTTATCCTCAGCAGCCTGATCTTGCTGTTAAGTGCCTCCGCATTTCCG TTTGAGACACTGTGTCGCATCGCATTCAGGATCCCGTACAGCCTTTTTCCTATCGTTTTCGCGGCATTTT TCATCATGGGAACGTCACTGTTAGCCGCCAGCGCCAACCATCTCTGCCAGTCACTCCGTCTTTCCTCGCT CCATGGCCTGTTCCAGATATCCTTTGCCAGCTCTTTCAGCGCCCAGCACTGGCTCGTCAGCTTCATCTGT GCACGCAGCCACATCAGCTTTTCCTGCCGGGATTCGGTCATCCACTTATCGCTGTACTGCCACAGGAAGC GGGTTCCTTTTGCCTGGTGTCGGCTTTCAACAGGGAGGTGCGGATGTTCATTCTGACGGGTTTTATCAAC TACCTCGCCCAGTTGCTTCGCCACATGGAAGCGGTCAAAGGCGATTTTCTCAACCGCACTGGGTAAGTGG ATACGCGCTGCTCTTATATAGCCCGCGTTCATGTCCATTGAGAGCGTTTTGATAGCCAGCAACTGCCCAT CAGTGAGCGTGCGAAGATAGCCGGCAAGACTCTCTGTGCCGCGATCATCCGTTAAGGCCAGCGCCCGACC ATCGCGATCGGAGATCACCGTTATGTAACGATGTCCTTTTTTAAAGGCGACCTCATCCACATTCATATGA CGGGCGGATAATGGCTTTTTTATCCGGGCAAGACCTCGCTTAACTGCCCGGGTCATAATGCCGTCAACCG CATTCCAACTGAGCTTAAGTTGCTTCCTGACAGCATCAACGGTGCTGATTTTCAGCCATGAGAGAACGAA CGATTCGAATAGCAACGTATACCGGCTTCCGGGGCCAGCCCACGGAACAGGCAACGTCAGGCAGCCATGC TCCGGACACATAATTCGTGGAACATCGGCTTCAACAATAGTGGTGAACTGGCAGGTATCAAGATGGCGCC ATTTACGATGACGGTGATCGTGAACAGAACAGGATTTACCGCAGGTCGGACAGGCTAGCCGGGTGTTTTC AGCGATCTCAATAGTGACAGTAACAGAACCGGCATTTTCATCGAGAGAAAGGGACTTTACCTGCCACGGA TCGGACAGGTTGAGAATATGAGCGTAGAGGGACTTTTCGTCCATGGCGGTGACCTCTGGCGATTAAATAC ACCATTATCATGCCTTCAGCCACCACAACAAGGGAAGACCCATATGCATACAGCTATATTGATCGGAGGT TTTTCATGCCTAGACACTATGAAATTGACTCAGCCTGGCGTGCGAGCATTAAGCGTGAGCCGAACGGTCG TCAGACAGTTACGACAGAAGCCTTTGTCAGCCAGCTTGCGCTGATTAATTTTCACTGGAGTTGTCGCCAA GCAAATCAGTGGATTGAAACCTACGTGACCGTTTTTAAAGACATTTCCACTCAGGAAGGAGAGAACCGGA CATTCATGCTTTTTAACCCCAACGGAGGCCGTTAAAAATGGGTTTTCCATCGCCAGCAACCGACTACCAG GAAAACAGGCTGTCACTCGATCAGCACTGTAATACAGGAGCGCCGGGAGTATTCTTTTTTCGAAGTGATA CCTACTCTTTCCGGGAAGGGATAAAGCCTGGTGCGCTGCTCATAGTAGATTTTGGGGGCACGCCCGTTGA CGGGTCTTTGGTGCTCTGTGTCCTGGAACAAGAATTCAGGATCATGCGATTGCGACTACACCCCAAGCGG TGTCTCCAGGAACTCGATAAGCTGGATAACTTCAGGGCTATACCTGATGACGATGAGGACGGGTTGGAGG TCAGGGGGGTCATTACGCACATTGTGGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTC AAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGC TGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATG GATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCC GGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCG ACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATT TTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGATATAAAAATCGACAGTGCGGCCCC GGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCA CGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGA ACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGT AACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTT GAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACA GTGCCCCCCGCCCTGCAGGAACGCCTGCGCCAACTGCATCCCTACGAACTCCCGGAGCTGCTCGCGGTCG AAGCCGCGTCCGGCCTGCCCGAATACCTGCAATGGCTGGCCGCCGAGAGCCGACCGGTAAACTGAGCCAA TGACCGCATCCACGATCCGCCTGCGCCGCTGGCTGGCCGGGCTCGCCCTGCTGCTTGCGCTGCCCGCGAC CTCGGCCGTCGCCCAGGACTTCGAACTGCCGCCGGTCGACGAGGTCTTCGTCCTGTCCGCGCAGGCCACC GCGCCGGACCGCATCGAGGTGCGCTGGCGGATCGCCGACGGCTATTACCTGTACCGGCACCGCACCTCGG TCAAGGCCGATGCCGCCTTCACCGGCGCGACCATGGCGCTGCCGAAGGGCAAGGCCTACCGCGACGAATT CTTCGGCGACGTCGAAACCTACCGCAAGGAATTGCTCGGCACCCTCACCGGCACGCCCGCGGCCGGCGCG AGCGCGACCACCCTGACCGTGAAGTACCAGGGCTGCGCCGATGCCGGCGTGTGCTACCCGCCGCAGACCC GCACCCTGAAGGTCGCGTTGCCGGGCGAAGCGGGCGCTGGCGGCTTCGGCTGTAAGGCGCGCGGGCTGCA TGATTATGTCGTCAAGAACGGCTCTGCCGATCATCCCAACGCCGAGGTGAAATTCGCACTGGGTGATGTG GTCAACACCATGATCGGCTGCACTAATGGTGAAACGATCATGCTGTGCCACGACACCTCGCTGCCGCGCC CCTATTCTCTCGGCTTTCGGGTGCAAGGCACCGAGGGGCTGTGGATGGACGTCAACAAGTCGATCTATCT GGAGGGCAAGAGCCCACAGCCGCACCGCTGGGAGCCTGCCGAGGGCTGGTTTGCGAAATACGATCACCCG CTATGGAAACGCTACGCCGATCTGGCGGCAGGGGCCGGGCATGGCGGGATGGACTGGTTCGTGATCCACG CTTTTGTCGAGGCGCTGAAGGCCAAGGCCCCGATGCCAATCGACATTTACGACGCGCTGGCCTGGAGCGC GATCACGCCTCTGTCGGAACAATCGATTGCTGAGGGCAATCGCACGTTAGATTTTCCCGACTTCACCCGA GGGCAGTGGCGCACCCGCAAGCCGATCTTTGCGCTGAACGACGCCTATTGATCGACGCGATTTAGGCCAA GCGCACCGCAAAGGCGAAATTGGTAATCTTGTCGGTATCCTTGACGCCCGGCGCGCTTTCGACGCCGCTG GAGGTATCGACCAGCGGCGCTCCGGTGCGCGCAATCGCCTCGGCAACATTCGTCGGATTTAGCCCGCCTG CCAGCCCCCACGGCAAGGCACCGCGATATCCGGCCAGCAGCGACCAGTCGAACGCCAACCCCATGCCGCC GGGCAGCGCGCCTTTGGGGGTCTTGGCGTCGAACAAGATCAAGTCCGCCGCCCCGGCATAGGCTGCGGCG CGTGCGACATCGCTGGCGCTGGCGACGGGCAGCGCCTTCCACACCGGCTTGCCAAACCGCGCGCGCAACT GGGCCACGCGTTCGGGCGATTCCGAACCGTGCAGCTGCAGCGCGTTCAGCTTGGCTGCCACCAGTGCGTC GGCGATGACAGCATCATCCGCATCGACGAACAAACCGACCATGGCGATCTGGCCAGCTGCGCGCGATGTC AAAGCGCCCGCGACATTCGACGTAACCGCACGGGGCGACGCTGGATAGAACACCAACCCGGCATAGTCCG CCCGCGCCGCGATGGTCGCATCGAGCGCCTCGGGTGTGCTGATCCCGCAAATCTTGATTTTCGCGGGCAT GCGGTCAGTCGGGGTTCTGGATCAGCCGCACCAGCGTGCAGTCGGGATCGATCAGGTAGCCGATCCTCAG GCCGCTCGCCTCCAGTTGCGGAGCTTTGAAGCGCGGCCAGCCGGTGCTTTTTTCCTCGGCTCCCGCCGCG TTCACCAATGCCACCATGGCATCGAGATCATCCAACCGCAGGCAACAGCCGAACGAGCTCGTAGCTGGGT CGAGGTCAGGATAGGGGAAGAATTCGAGCTGCAAACCGCCGCGCTGCAGGATCATCCAGCCGCGATCCTT CCAACTCGTCGCAAAGCCCAGCTTCGCATAAAACGCCTCTGTCACATCGAAATCGCGCGATGGCAGATTG GGGGTGACGTGGTCAGCCATGGCTCAGCGCAGCTTGTCGGCCATGCGGGCCGTATGAGTGATTGCGGCGC GGCTATCGGGGGCGGAATGGCTCATCACGATCATGCTGGCCTTGGGGAACGCCGCACCAAACGCGCGCGC TGACGCGGCGTAGTGCTCAGTGTCGGCATCACCGAGATTGCCGAGCGACTTGGCCTTGCTGTCCTTGATC AGGCAGCCACCAAAAGCGATGTCGGTGCCGTCGATCCCAACGGTGATATTGTCACTGGTGTGGCCGGGGC CGGGGTAAAATACCTTGAGCGGGCCAAAGTTGGGCGCGGTTGCTGGTTCGACCCAGCCATTGGCGGCGAA AGTCAGGCTGTGTTGCGCCGCAACCAGCCCCTCTTGCGGGGCAAGCTGGTTCGACAACGCATTGGCATAA GTCGCAATCCCCGCCGCATGCAGCGCGTTCATACCGCCCATCTTGTCCTGATGCGCGTGAGTCACCACCG CCAGCGCGACCGGCAGGTTGATCTCCTGCTTGATCCAGTTGAGGATCTGGGCGGTCTGGTCATCGGTCCA GGCGGTATCGACCACCAGCACGCGGCCGCCATCCCTGACGATCAAACCGTTGGAAGCGACTGCCCCGAAA CCCGGCATGTCGAGATAGGAAGTGTGCTGCCAGACATTCGGTGCGAGCTGGCGGAAAACCAGATCGCCAA ACCGTTGGTCGCCAGTTTCCATTTGCTGGCCAATCGTCGGGCGGATTTCACCGGGCATGCACCCGCTCAG CATCAATGCAGCGGCTAATGCGGTGCTCAGCTTCGCGACCGGGTGCATAATATTGGGCAATTCCATCAAG TTTTCCTTTTATTCAGCATTAAAAACCCCGCAAATGCGAGGCCTAGTAAATAGATGATCTTAATTTGGTT CACTGTAGCAAAAATATGGGGCGAATTCAAACATGAGGTGCGACAGTTTCAAAAGCCATATGATAATCAA CAAGCTGAGCAAATTTCTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGA GCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCG TCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTC ATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTC ACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCAT GCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCTGACCGCACCACCATCATGAATTTCCGCCAC CTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCG TCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGA GCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAATGGCACTTTGGCATGAAGGCCCAC ATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTAGTCACCACCGCGGCCAACGAGCATGACCTCA ATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCC ACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACC TTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCA AGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCT GAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGT CAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTG ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAA GAATTTCCCCGCTTATTCGCACCTTCCCTAATGGTGTAAGCCAATCTAACGCCTTTCTAGGACGAGTATT CAGTGACATGGCAACTTGATTTAAATAATGCTGATCTGCCTGATTTAAATCAATCCCTTTAGGTAAATAT TGCCTAATTAAACCATTCATATTTTCGCATGTGCCTTTTTGCCAGGGTGAATGTGGGTCACAGAAATATA CATCTATGCCTAAATCTTCTTCGAGTATTTTATGTTCTGACATCTCACGTCCACGGTCATAGGTCAACGT TTTACGCAGTTCTGCAGGTAAATATTTCAGAGCTTCAGTTAAAGCCTTGCGCACTGATTCTGCCTTTGCA TCAGGTAATGTTGCCAAGATACAGAGCCGTGTATTTCGTTCAATAAGTGTTGCTATCGAACTTTTATTGT CTTTACCTTTAATTAAATCAGCTTCCCAATGACCCGGTATTTTTCTTTCTTGAACTTCGGCTGGGCGCTC ATGAATAGTTTTAATATCCTGTAATATAGAATCTTTTTTAGGTTCACCGTTAGCTTTTCGCTTTTTATTT TCATGACGTAGACAGGATAATAAGTCTTTTTTCAACTCACCCTTTGGTAATGCTCGTATCGTTGAATAAA TCGTTGTATGGCTTACATTCATTGTTTGATCCAAATCAGGAAATGTCTTTAAACGCTTTGCTATTTGCTG AGGAGACCATAAACAACGGATCGCTTCAACAATAAATTTCCAGAGGATTGAATCGATTTTGAGTTTTCTG TGACCACGTCTACGTCTAGCGAAGGTGTTATCAGAAGCATATCGAGCTTGATAAACGTCATTGATGCTAT TTCTTTTAAGCTCACGATAGATCGTACTAGGATGTCTTTTAATGAGTTCAGCAAATTTTCTGGCTGAAAA GCCTTCTTTTCTTGACTCAAGCATTAATGCAGTACGATCTTCAAAGTTAAGATGATGGTATGACAATTTT ATATACTCCATAAACCCTTTAAATTAATTAGGTGGTTTATGTCGCACTTCAAGTTTTACTCTGCCAACTT TAAATCAGTGGCTCCACTAACACTCTTCACTTATTTATTTAAAATTTAGCGACGTTAAAAGACAATTAAG TATTTTTAGATAATGGGGTTCTAGGGATTTTCCGTCCAAAAACGACAAAGTGCTCTGGAGGCCGCGCCGT CCGTGGCCTCCAGAGGGGTATTACTTTTCGCTGACGGGTAAATATCCCTCGATTGAGCGCATAAGCTCCT CCAGATCTGGCAATTTTTCGCTCAATTCGAAGTGGTAAGTCCCCTTGAGGTTAATGTTGTGCCAGGCCAC AGGGGATGCCTGTTTGACGATATCTATTCTCTTGGTATCTCCTTGGTATTCGAAGCTGGTCAACAGCTGG CTGAGTATCCTGGAGTTGAAGTAAACGATGGCATTGGTGACCAGGCGAGCGCACTCATTCCATAGCTGGA TTTCTTCGTCTGAACTGCCCCGGAACTGATCCCCATTGACGCTGCTCACGGCCCGACGCAGTTGGTGATA GGCCTCTCCCCGGTTCAGCGCGCGCTGAACATAGTTTCTTAAACTGGCATCATCGATGTAGCACAGTAGA TAATTCGCTTTCACCAGGCGATTGTATTCCGTCAGGGCTTCCAGCAGCGGGTGATTGCGCTTGTACTCCG AGAGCTTTCTCACCAAGGTGGCTTGCGTTGTTTTCCGCTGCTTAAGTGATACTGCAATCCGTTGGATGGT ATCCCAGTGCTGCGCAATACGATGGGTATTGATTGGCTTTTTTAAGCACAGCTGAATTCGGTGTTCTTTG TCTTCCTTGACATCAAACATGTCATTGATCACTTTGCCAACCTGGGCATAGCGTGGGGCAAACTGGTATC CGAACAGATCCAGTAACGCGAAGTTCACATGGTTCACCCCATGGGTATCGGTTGAGAGCACATCCGGAAT GATGTCTGACGTATTGCTCATCAACAAATCAAAGATGTAGTGCGATTCATGTTCGTTGGCGCCGATCACT CTGGCGTTGATCGCAGCGTGATTGGCGATCAAGGTCATGGCAGAAACACCTTTTTGAGTGCCAAAGTACT TCGACGAATAACGGGTTTTGAAGGTCTCGCGCCGGGCTTCGAACTTTTGACCATCGGCACTGGCGTGGAT CACATCTTCCTGGATGTTGTAGTACCGGAAGATGGGTAGCTTGGCTGTCGCGTTATTGATGTTGTCGTTA GCAGCATTCAATGTTTCCAGGCGAAGATAGTTCGCCTGGATAGTGCTGAGCTGATCATAGGTACGATCAG AGATCTGTGCCATGCCGTAAATGCCTTGATTGGTTGCATTGCCGACCAGAATTGCCAACAGGTCATATTC ATGGGAACGGCTTCTGGATTGGGAACCCAGCACATGAGCGAAGCAGTCAATGAAACCGGTGTCACGATCA ACCATGCGCAGTACATCCGCAATCCCCGTTGTGGGAATTTGCTGGAAGAAGGGATTGTTGACCAGATGAT GTTTGCTGGCCGAAGGCAGGCGCCAGAAGCGTTTACCCTGCGGATTACGCAAGATGATATTCCGGTTGTC TTCCTGTTCAAGATATTCGCCGACTTCGTACAAACGGGTATCCAATTCCATGGCCATCTGTTTGATCAGC TTTTCAGGCTCCTCCGCTAATTTTGTAAAATGGCTCTGTTGAAGCAGCGTATATTTGTTTTTTCGCCAAT GTTCCCCGTCGATCAGGTCGGCGTCGAGTGCCCGGTATTTAGTGATATCAGGCAGCGTCAGCTGGCCATT CAGGCGATCAGGAATCTGTTGATAGAGGAACCACTCATAACGATCGATCAGGATATTCCCTTCACCATCC AGCAGGAATTCACGTGATTTTTTGGAAAGGAGTCTGGTGTCGGCAGTTTGCAACTGAGCGTCCTGGCCGT TGAGTTCGTTTTGTGTTTTCGCCAAGGCGGCCGCTAAGTGCTGGGTGCCGTCGCAGCCTTCGAAGCGCAG ACATAGGAACAACTCTCGCAGCAAACCTTTCCGCAGACTTTCTTTCTCGTCGCAGTACTGCCACATGGCT TCATCGACCGATCGTCGCTGCTCGTTCAGGAAGAGACATACAGATTCCAGATCCCTTTTGGTCAGCAGGC TCAGTGCTTGCTGTCTTACTGTTGCAAACGGTAGTTGCAGATCAATGCTGTCATCAATGAACAGGTGCAG TACTTCAGCTGCCTTGCTGACATTTTTAGCTGCTTTTTGCCAATCCTTAAACACCGCTTCCTGCGCATAA TCCTTTGCCTTCTGTTTGGTCTGTCTGACATGATGCACAAAGCCATCGGCAATACGTTCCAGCGCTTGCT GCCATCGCGTTTGAAGATAGCACAATAAATACAGCCATTGGCTGCCTACGGTTTGACGTTTCAGTTTGGC ACCGTAGTAGTCGACTTTCTCTGCCAGGTGTTGCAGATTTTTCTGCGACAGTGATAGCGTGCTCAACAGC AGATCCACTTCCGGCATCCAATGCTGGATATGGCGATAGACAATCAGTTCTTTCTCCAACTCGGTTCCGG TGAAGTTACGAGCCGATTGTCGCAACTGTCGGAACGGCAGTGGACCTGTGCCGTTCACGAGCTCCGCCAG TGCTTGCTTAAGACCGCGTGACATTGCACGCTCAAGGTGCGCGGCCATGTGTTCCTGTTCGTCTCCCACC ACCTGACTGATGATCTTTTGCAGCGTGCTGTAGGCAGGGATTGCGATCTTCTGCCCCGAACAATATTCAT TGGCCGCATCGAAGAGGTGCCTAGGCGCTGTCCAGGCTCTGGCTTGCTGGGATAAGTAATCTCTCAACGC CGCTCCATGGTCTTTGACATTCCAGCGCTGGTAGTTGCAGAGCTGGAAAACACGTTGGTAAATCCGTTCG TTCTCTTTTGGCGTGAGATTAAAGGGTCTACAGCCTGGGCCTGGTAGAACGGTTTGATAAACGTATTTGA GGTCCTGCTTGATCTGATGAAAGCCGGGATTCAGCACCACCGGCTTGGCTTTGAAATAGCCCAGCAGTAC CACCAGCATGTAACGCTGGCCCCGATGACGGAGGCTTTTAGCGATCGCCAGTTCCTTATCGTTCAGCGAG AAAAAGAAGCGTTGGTCGGCGGAGGTGAAAGCGGGGGGTCCATATAACTCATCTTGTTCTGCCTCGGACA AGATTTGGACACGTTCTTCGAATGCCATGGATTTAGCCCAAAAAGACTAAATCTTACTCAAACAGAGCCC AAATAGGGATCTCGAAAAAAGTAATACCCCTCTGGAGGCCACAGACGGCGGGGCCTCCAGAGCACTTTGT CGTTTTTGGACGGAAAATCCCTAGAACCCCTCAGTGGGACGAAATGATCCGGACCGCTGGCTCCCTGAAG CTGGGCAAAGTACAGGTTTCAGTGCTGGTCCGTTCATTGCTGAAAAGTGAACGTCCTTCCGGACTGACTC AGGCAATCATTGAAGTGGGGCGCATCAACAAAACGCTGTATCTGCTTAATTATATTGATGATGAAGATTA CCGCCGGCGCATTCTGACCCAGCTTAATCGGGGAGAAAGTCGCCATGCCGTTGCCAGAGCCATCTGTCAC GGTCAAAAAGGTGAGATAAGAAAACGATATACCGACGGTCAGGAAGATCAACTGGGCACACTGGGGCTGG TCACTAACGCCGTCGTGTTATGGAACACTATTTATATGCAGGCAGCCCTGGATCATCTCCGGGCGCAGGG TGAAACACTGAATGATGAAGATATCGCACGCCTCTCCCCGCTTTGCCACGGACATATCAATATGCTCGGC CATTATTCCTTCACGCTGGCAGAACTGGTGACCAAAGGACATCTGAGACCATTAAAAGAGGCGTCAGAGG CAGAAAACGTTGCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCTGTTACCGATGCAAGAACAG GGGAGTTTCATGAAATGCCTGTTTAGGAGTGATTAAAGGTAACTTGTGCGCAGAAGGTCAGGTGTGTGGT GGTTAGTACAGACTAGTGAATGTTGTAACTAAACTATATTTTTATTAAAGGCCGGAGGTGGTGTTCCTCC GGCCTTAATTACGTTTCCGTGTTCATTAGTCGATGAACTGGCGGATCAGTTCCAGAATGGCAATCAGCGC GTTTGCAAGCGCCGCTACCGCCCTCAGAACGATGATTAACAGGTTAATCATCCGTTTTCTCCATAAATGG AGTAAAGACACCGTGGCTTGCTCTTACACTGCCTGTCACCACGGCTTCTCTTCGTCTTGTCAGTTGTAGA GAGTCTCACTCCTGCCAGAGCACAGATAACCAGCACCACCTGTATTACCTGTCAGGACTTTGAACCTGTT CATGCCGCATTTAGCGGAATGCAGGGAGAGACTCACCACAGAGCTAACCCTCTGATTATACGTTTATCTA ACGTTCAGGCAAACCGTTAACGCACAGTCACTGCCCGTCATATTGCATAATCAGGCTTCACGGATTATCA TACTATTGTCAGTTGTAGAGAGTTTCCCTTCCGGGCTGAGTTACCAGCTCGCACCGGAACCGTAAAAAAG CCGACCTCACCAGTCGGTTTTTTTACGTCTGCGGTTTCCCGCTTCGTTTAAATCTATTTTAAATGAATAA ATTGTTCTGCGGCAAACCCAACAACATAAGGACGTTAGGGTTGATGGTTGCCGAAATCGCGGTGCGTTAC GTGAATTCTGAGGTTTTGCGAGGGGGATTGGGCGCGAGAATTTACGAGAGAGCGCCGGAACAATGCCGGG ATCACAAACCATCACCCGTGAAAGAAATCTTCCGGCATTGCCCGGTCAGGTAGTATGACATTCATTGTCA ACGGCCATCAATTTATAAGCTGCTTTGCACTTCATAAAAGATCACCACCAGGGCTGCTAAAACAGTACCG ATAGCCAGCACGTTAAAAAGTACGTCCTTCATCTTTACGAACGACATACTGATTTGCGTCCTTTCCCTTT TGTCAGCCTTCTCTATCATCCAGCGTTGGTATGAATCACTGTTACTTTTTCTGTCCATGTTCCCCCCAAT TCATCAATGAGCACCAGGCGGCCACCAGGCTTCTTGCCAACAAAGTAACGGCCTCGCGGCAGACGTTCGC CAGTCTTCAGCCGTTCGATCCAGTCCTGAAATGCAGGGCGCGGTTTATAGCTGTAGCGGCCAAAATCAGC TAAAGACTGCGTGACCATGACTGTTTGGCAGCCATGCTTTCTCATATCACGAAACGTATTTTCCAGTGCA GCCAGTGTATTCATTTGCACGTTCTCTCTGCTTTTCCCATGAAGATATTAACGACACTCAAAACTAACAC CGTTGGCATGATCACGGCAGCATAGCCGACAGCAACGGCCTGATATATGGTCAATGAGTAGTCGGGCTGT TTATACAATACGACTGAAAAAATGCTCCCCAAACAAGCAAGCAGAGTTAAAAACAAGTAATCGACAAATC TGTTTTTATAGATAACCCATGCAACGATGCAGGGATATGACACCAGGCACAGGATAATCGCATTTGTGGT ATGCACGTTTCGCTCCTTGTTATTTAAGGGTTGTCAGCCAGATCAAACAGATTGTTCAGGCTGGAACGGA ATTGTTTTACCGATGATACCAGCTCCTGACTCCGCGCTTTTTCCTGCGCCAGTTCACGCCGTAGCTGCGC CATCTCGTCTCTGTTACGCTGAAGCTCAAGGATAGCCGTCATAAAGGTTTTGCTGGCTGATGCCTGTCCG GTCGCTTCCTGCGCCTTTTTAATGGCCTGATCTTCGTCGTCATTCGTTCTGATTGTGTAATGCCCCATGA TACCCCTCTTTTGCTGTCATTTTTGCGCTGCCGGCGCGAACCCGGGAAGAAACTTTGCTGG
Region Details
| Region | 1 |
| Region Length | 19.8Kb |
| Completeness(score) | incomplete(30) |
| Specific Keyword | transposase |
| Region Position | 20302-40172 |
| # tRNA | 0 |
| # Total Proteins | 7 |
| # Phage Hit Proteins | 6 |
| # Hypothetical Proteins | 0 |
| Phage + Hypothetical Protein % | 85.7% |
| # Bacterial Proteins | 1 |
| Attachment Site | yes |
| # Phage Species | 5 |
| Most Common Phage Name(hit genes count) | PHAGE_Staphy_SPbeta_like_NC_029119(2) PHAGE_Entero_HK140_NC_019710(2) PHAGE_Ralsto_RSA1_NC_009382(1) PHAGE_Escher_HK639_NC_016158(1) PHAGE_Entero_P1_NC_005856(1) PHAGE_Deep_s_D6E_NC_019544(1) PHAGE_Clostr_phiCD146_NC_028958(1) PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1) PHAGE_Burkho_KS14_NC_015273(1) PHAGE_Burkho_phiE12_2_NC_009236(1) PHAGE_Vibrio_VP58.5_NC_027981(1) PHAGE_Sodali_phiSG1_NC_007902(1) PHAGE_Salmon_Fels_2_NC_010463(1) PHAGE_Cronob_phiES15_NC_018454(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Entero_HK225_NC_019717(1) PHAGE_Clostr_phiCD211_NC_029048(1) PHAGE_Escher_pro483_NC_028943(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) |
| First Most Common Phage # | 2 |
| First Most Common Phage % | 28.57% |
| GC % | 49.19% |
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| # tRNA: | The number of tRNA genes present in the region. |
| # Total Proteins: | The number of ORFs present in the region. |
| # Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
| # Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
| Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
| # Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
| Attachment Site: | The putative phage attachment site. |
| # Phage Species: | The number of different phages that have similar proteins to those in the region. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
| First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
| GC %: | The percentage of GC nucleotides of the region. |
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Questionable (score 70-90)
Incomplete (score < 70)
| Region: | The number assigned to the region. |
| Region Length: | The length of the sequence of that region (in bp). |
| Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
| Score: | The score of the region based on the above criteria. |
| # Total Proteins: | The number of ORFs present in the region. |
| Region Position: | The start and end positions of the region on the bacterial chromosome. |
| Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
| GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|CP021759.1| Klebsiella pneumoniae strain AR_0138 plasmid tig00000002, complete 46161, gc%: 46.65%
Download details as .txt file: detail.txt file_download
Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File
Hits against Bacterial Database or GenBank File
Region 1, total 9 CDS
| # | CDS Position | BLAST Hit | E-Value | Sequence |
|---|---|---|---|---|
| 1 | 20302..20313 | attL | 0.0 | Showinfo_outline |
| 2 | complement(24401..25063) | PHAGE_Sodali_phiSG1_NC_007902: ParA-like protein; AM385_27860; phage(gi89886027) | 9.55e-16 | Showinfo_outline |
| 3 | 25444..26106 | PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; AM385_27865; phage(gi509140089) | 3.29e-15 | Showinfo_outline |
| 4 | complement(26195..27415) | PROPHAGE_Escher_CFT073: transposase; AM385_27870; phage(gi26249432) | 5.56e-124 | Showinfo_outline |
| 5 | 27517..27756 | PHAGE_Entero_HK140_NC_019710: hypothetical protein; AM385_27875; phage(gi428781966) | 1.16e-08 | Showinfo_outline |
| 6 | 27759..28115 | PHAGE_Entero_HK140_NC_019710: hypothetical protein; AM385_27880; phage(gi428781967) | 1.51e-24 | Showinfo_outline |
| 7 | 28084..28203 | AraC family transcriptional regulator; AM385_27885 | 0.0 | Showinfo_outline |
| 8 | complement(28149..28853) | PROPHAGE_Brucel_1330: transposase, putative; AM385_27890; phage(gi23502708) | 5.08e-53 | Showinfo_outline |
| 9 | 40172..40183 | attR | 0.0 | Showinfo_outline |
Sequence
>20302..20313
GCAAAAAACACT
Sequence
>complement(24401..25063)
[Klebsiellapneumoniae]
Sequence
>25444..26106
[Klebsiellapneumoniae]
Sequence
>complement(26195..27415)
[Klebsiellapneumoniae]
Sequence
>27517..27756
[Klebsiellapneumoniae]
Sequence
>27759..28115
[Klebsiellapneumoniae]
Sequence
>28084..28203
[Klebsiellapneumoniae]
Sequence
>complement(28149..28853)
[Klebsiellapneumoniae]
Sequence
>40172..40183
GCAAAAAACACT
Click on a region to see details.
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Length: 46161 bps
Phages: 1
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Click on a region in the genome above to show details here.
Click on a region in the genome above to show details here.
Viewer Options
Click on a sequence to see details.
Locus 1: attL (Region 1)
Locus: attLORF Start: 20302
ORF Stop: 20313
Strand: Forward
Protein Sequence: GCAAAAAACACT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
Locus 2: AM385_27860 (Region 1)
Locus: AM385_27860ORF Start: 24401
ORF Stop: 25063
Strand: Backward
Protein Sequence: MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTIPVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSQEFRSALTVSDIVVTLVKPSSDFESETLTSVTEKIRTAQKANAALEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISELDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM385_27860, ParA-like protein, phage(gi89886027), PHAGE_Sodali_phiSG1_NC_007902
Homolog/Ortholog E-Value: 9.55e-16
Locus 3: AM385_27865 (Region 1)
Locus: AM385_27865ORF Start: 25444
ORF Stop: 26106
Strand: Forward
Protein Sequence: MTQTVPKGFVRAYLRASTTEQDATRALDTINTFAIERGLSICNYYIENESGSKLERPELFRLLKDCQQNDILLVEDVDRLSRLVGEDWNTLKKMIRQKDIRVVAVNVPTTWLASGHNDFDSRMFSAINDMLLDMLAAVARRDYEQRRERQQQGIARAKREGKYKGRQVNQSRYDAINRLIASGSSWSQIQKVLGCSRATISKAVKQQTVNKMNHEPEGRE
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: AM385_27865, putative resolvase, phage(gi509140089), PHAGE_Clostr_vB_CpeS_CP51_NC_021325
Homolog/Ortholog E-Value: 3.29e-15
Locus 4: AM385_27870 (Region 1)
Locus: AM385_27870ORF Start: 26195
ORF Stop: 27415
Strand: Backward
Protein Sequence: MDEKSLYAHILNLSDPWQVKSLSLDENAGSVTVTIEIAENTRLACPTCGKSCSVHDHRHRKWRHLDTCQFTTIVEADVPRIMCPEHGCLTLPVPWAGPGSRYTLLFESFVLSWLKISTVDAVRKQLKLSWNAVDGIMTRAVKRGLARIKKPLSARHMNVDEVAFKKGHRYITVISDRDGRALALTDDRGTESLAGYLRTLTDGQLLAIKTLSMDMNAGYIRAARIHLPSAVEKIAFDRFHVAKQLGEVVDKTRQNEHPHLPVESRHQAKGTRFLWQYSDKWMTESRQEKLMWLRAQMKLTSQCWALKELAKDIWNRPWSEERRSDWQRWLALAANSDVPMMKNAAKTIGKRLYGILNAMRHSVSNGNAEALNSKIRLLRIKARGYRNRERFKLGVMFHYGKLNMAF
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM385_27870, transposase, phage(gi26249432), PROPHAGE_Escher_CFT073
Homolog/Ortholog E-Value: 5.56e-124
Locus 5: AM385_27875 (Region 1)
Locus: AM385_27875ORF Start: 27517
ORF Stop: 27756
Strand: Forward
Protein Sequence: MPRHYEIDSAWRASIKREPNGRQTVTTEAFVSQLALINFHWSCRQANQWIETYVTVFKDISTQEGENRTFMLFNPNGGR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM385_27875, hypothetical protein, phage(gi428781966), PHAGE_Entero_HK140_NC_019710
Homolog/Ortholog E-Value: 1.16e-08
Locus 6: AM385_27880 (Region 1)
Locus: AM385_27880ORF Start: 27759
ORF Stop: 28115
Strand: Forward
Protein Sequence: MGFPSPATDYQENRLSLDQHCNTGAPGVFFFRSDTYSFREGIKPGALLIVDFGGTPVDGSLVLCVLEQEFRIMRLRLHPKRCLQELDKLDNFRAIPDDDEDGLEVRGVITHIVALLQS
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: AM385_27880, hypothetical protein, phage(gi428781967), PHAGE_Entero_HK140_NC_019710
Homolog/Ortholog E-Value: 1.51e-24
Locus 7: AM385_27885 (Region 1)
Locus: AM385_27885ORF Start: 28084
ORF Stop: 28203
Strand: Forward
Protein Sequence: LRTLWHCCKVSDEAAFCLIQRPYISKTLLTRRISPRGSP
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: AM385_27885, AraC family transcriptional regulator
Homolog/Ortholog E-Value: N/A
Locus 8: AM385_27890 (Region 1)
Locus: AM385_27890ORF Start: 28149
ORF Stop: 28853
Strand: Backward
Protein Sequence: MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYISSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: AM385_27890, transposase, putative, phage(gi23502708), PROPHAGE_Brucel_1330
Homolog/Ortholog E-Value: 5.08e-53
Locus 9: attR (Region 1)
Locus: attRORF Start: 40172
ORF Stop: 40183
Strand: Forward
Protein Sequence: GCAAAAAACACT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Lysis
Terminase
Portal Protein
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Other
Transposase
Fiber Protein
Plate Protein
tRNA
Plate Protein
tRNA
Download data as .txt file: png_input file_download