Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1231193240 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1231193240.PHASTER.zip
gi|00000000|ref|NHOE01000122.1| Klebsiella pneumoniae strain 3111F plasmid pPOAMCR-1KP, whole 38942, gc%: 41.83%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 14.1Kb | incomplete | 30 | 14 | 23291-37431 info_outline | PHAGE_Entero_mEp234_NC_019715(2) | 41.12% | Show info_outline |
>1 23291-37431 TTTAATACTTTTTTTGCGTTTTTCCAGTTTTTCTACACGCCCATCTGGTCTGTAGATCAGCGTAAAGTAA AGAGTGTTCCCCTTGAATTTATTTTTCTTCATCGAACCATAGTAACAATCTGATATTATATCAGCATATT TATTACCTGATTTTGTGGTAAAGGCATCATAAAAACTCGCCCTGCATGAATGGTTATAAAATGAAACGGG CAGTCCGGAAAATGAACGAACAAGAGTGGCAACCTGTGAGTCAATAGTTTCTAACATCTCCGCAGAGATT GACTCAAAGTTAATCCCCATCAGTTGCCATGTCGCTACATAATCACCGTTCTTTGTTTTGACAATATTTT TATCAACATGGCTTGAATAGGGTATATATTTACCAGTAGTGATTCGCTCATTCAGTTTCATGGCATTAAC AAACTCATCAATTTCAACAGCTTCATATTGTCCGGAGAGGAACGCTCGTGCGCCAAAAAAACGATTACAC ACTGAGTTTCCGAGCATTTTCAGCTTAAGAAAGTAAAGGTTAAAAATGTGGTCGTCCTGTTTAGTGATCA TTCTGAGAACAAAAACCGCGACAGGAATAGCCAGCCAGATCAGCTTGCTGATATAAACCCCCGCCAGAAA TAACGCCCCTGCAACCACAGTAAGAGGGACGACAGGAACACCCACATACATAGCAGGGCGTGTCATCGCT TTATAAAGTGTAGACATACTATCGTCCCCGCTTTATTAGTTAACCATCATTGATGCAACTTCAGCCGCAC TGGCGATAACAATTGCCCCGATGATGATAGGTGAGCATTCACGAATCGTGCTTCCACCAAACAGAACCTT GTAGCCGACCCACAGACAGGCAATAGTCACCGTGACCAGTGAAAGGCCACTAAGCCCTGTTTTAACCTTT TCCAGCAGTGTTTCCGCTTTTGAAAATCCATCCGCAAAGGCCGGTGATGCAACTGTTGCCCCGGCGACTG CCATAACTACCTTATTTTTACGCTGCATTACAGCAGTGACAGATGAACTGATACGATTACATACTGATTT CTTAAATGACATTTTATAAGTCCTGTTAATTAATAACTTTTGTTGGATGTGAGTTATCAACAAAAGCAGA TTTCAGAATGGTTTCGGGCCAGATAACTGACGCATTGTGTGAACGATTTTTTCGCTGTTCTCCCCCGTTG CTTCTTGTACCTGGTACAACATATTTTTTTTCGTTCCCTGTATAACCAATTCGCTCAACATAACTTGTAT TATTAAATTCTTTTTCTTTTCGCTTACCGTTACTAAAATTTCCTGTATAGTAACAACTAAGCGCATTCTC CAGGCTCCTCCCTCGTTTATAACAATCCACGATAATCTTTTCGAAAACAGACAAGTTTTCACACGAATCA AGGAGTTTTTCTGCGGACGTGGAATAAAAAGAAAAATTACTGCTGGTAATCTGCATCAATCCGACAGAAT AACGTCTTTTTCTGTTTTCAATTTCTCTGATAACTGTTAGAGCTTCCTCCTTACTTTTGGGCATATGACT GATAACACTTTTGCCATAGCTACCGCGTTCCCTTTCAGGAATAATTTCAGCCACAGCATAAGGATTGAAG CCACTCTCGACCCGTGCAATATCATTTATCGTATCCGGATGAACTGACGCCGCACACAGCAACAAGGCTG GGAATAAAGACGCCATAGCTAACGCTCCATATATCCATCAATACGCATACTCTGCATTAATAAGTAAATA ATTTGCTTCCTCTTACTAAGCAAAGATGTTTTCGTTTTCTCTTCGATAAATGCATTCAACCTGGGATCGA GTTTTATCGTGACATAAACCCCTTTTTCCGATGACTTATCTGATTTCTCCTTCATTTAATCAATCCACTA TAAGTGTGTTTTGGATTTGTTTTAGATGCGAACATGATTCGCAAAATAACAATGCTCAACAATACGATCA AATAACATTGACAAAATGGTCATATTATGATTCGTGTGATCATGCAAAAAAAAGCGCCCATATGGGCGCT CTAGTATGATTGAAACATTAGTTAATCGAATGTAGGGACTGGAGCATCCTTCTGAGACTGAATAAACAAT GCTTGTTTAACATTCTTACAGTTCTGAGAATCAGAGCCAGACTTCTCACACTCTGCCTGCTTTTGTTTAG CTTCCGTAAGATGCTGCCCCCACCAATCCACACTTTTTACTTCTTCACTACAACCAACAACGAAGAACGG CAAAGCAAAAAGCAGATATTTTTTCATAAATTCCCCCTCTCACTGATCCTGGAAAGACTTGACACGAGAA GGGCATTAGTCCGAATGAGTACCAGTGTTCTGATCCCTGCCAACGAGACACCTCCCAGTTCAGCTCTTAC AGAATCGAGATATTTTCTGACAGTTGAAGGCTTTAGTCCTTTGAAATCAGCAATTTCATTCAGGGTATAG CCATAAGCGTACATCAGAATAATGTCTTTTTGTTGCTCACTCAAATGTTCTTCATCACTAAAAATTTGAT GAAGTCCAGAAATGCAGATAGCATCATGCTCAGTCATGATAACCTCCCTCGTAGGTTGTTGTGATCAGCA GGTGAGCAAAGTAGCCGCTTTGTTCACCTGCGCCAAAATCAAATTAAAATCCCAGGCCTTTCCAGTTCCT CTCTTGCTGTATTCTTAGTTTTTTATGTTCTTCTGAATCCTTTGTAAACCCGTGTTCAAGAGCAAACCCG ATATTGTGACCTTGCTCATGTTTTCTGGATAGCTGCTTTTTAACGTCGCTCTCTTCCGGCTGCCTGGTTT CACGCTCATGAACCTGACGTTCTCTGTTCCGCTCAAGGGCAATATTTTCAATCTGCCAGTTATTGCGATG CGTTTCCCTGTAGCCTGCAACAGTTCCATCATCATTAAACATTGGACTACGTACAAGCGTAGGAGCCAGT TTTTTTACTTTGATAAGCGTTCCTGGCTGGAGCTTTTCAGACTCGAAATGATTTTTCAGGTCTTTACCCC AAATCGTAACCTGTTTTCCACCTTTTAAAGTTTCATAAGTGAGGAAAGGTGTTCGTTTTTCCCCTGCCTT ATTCTGATATGAAGTCTCCCCAAAATCCACCACCTTGTAAACATTCCGGAGTCTTTTCGGATTTTCAGCC TGTAATCGCTCAATCTCCCGTTTACGTTCGGGATCTTTTTTCCAGGTAGCGGTAACATCATATCCCATAC CTTTCAGTTTTCTATGAAAACCGTTTCTGAACTTCCTGGTTTCAGATTTAGTAAGTCTTAATCTTCTTCC TGTTTCTTCATCACGAAGTTTAATATTAACATGTACATGAGGATGATCTTCTTTATCATCATGGTATACG GCAACGAAAGCATGGTTTGGATAAGTCTCTTTAAGAAATTCTACCGTAGCTTTCAGAGCGTCTTCCCTGC TTACTCCAGCTTCTGGTGGTGGTGAAAAGACCATGTTTTTCACATGATCGATGTTTTCTCCACGATATGT CCTGGAGTAATCATTTCCTTTAGATAAAGTTGAAGTAAACTCCCTATTAAAGTCTTCTCCTTTCCCTGTT TGCTCTGAACCTTTTCCATCATAACAGTAAGCCTCAAGTTCACCATTACGGGTAATGTAATCAATACCAT TTTTGATGCCTGCGGCTGTTTTACCTGAGCCAGTGATTTTAAAAGTGACTTCTTTTGTAGGTGTCCAGGT ATATGCTTTCTTGTCCGCACCATGTCTGACTTTATGATTAAAAGCCGATTTACTGGCATGTATATGTCTT CCCGATAACTTAGGAGATTTCGGATCACGCCCAGTCCCTTTAGCGCGTTTAATACGGTATTCCTGTTCTA CATACACACCCATAAATCACCCAAATCTGTTAACAACACTCTTGGTTAACGTTTCAAGTTTTGAATCAAT TTGCTTACACAGTTCAATCACTTCAATAACGTCTTTTCTGAAATCTGGATCGTTAACCGTACAGAATCTT TCACCTTTTATGATAAAATGAATGTTGCGACCAACACGATCTACAGCAGTTGATAGTTTTTTAAGTTCCT TAACTTCATCAGGGTAAAGACAGACTTCACTCTTTAACAAAGACTGACGCACACGAATAGCAATTTCTCT GCTCATGCTCATGCCGTGAAGAGCAGCATTACGTTTAACAAGTTCTATTTCATGAGGGTAAAGACGCACT GATACCAGCTTTGCTGGTTCATTATTAACTGGGATGTTAACAGGCTTGGTTTCAATATTAAGCACGTTAT GCTTAGCAAAAGCATTGATACTGGTAAATCCACTTAAAATAGCGTTATGTTCTGCAAATTTTAACTCATC ATCACTTAGCCTGAACGCTATCATCTTCATAAGTCACCCCAACAGAGCCTGCGGCAGGCACAGGCAAAAA CATCGTTTTTGGACAATCTGATTCAAATGTTAACATTTGACATCGGATTGTCTATCCTGCATTGATTGTA CCATATGTGGCACTGTGCCTGGCTATAAAATCGTCGCTGCATATGTCCAGATTTCGTTGCTGAAAGATTC TTTCGTCTTCGACCATCAGGCAAACGTATAGCTGAAAGATTTGTGAAAGAAAAAACAGGCCTGGCAGGGC TGGGAATTGTTACGGCTGAAGCCGTAACGCTTTTTAAGTCCTCGCTGCGCTGCGGGGCTTCCGGCGCAAA GCGCCTCCCATGCCCTTACAGGGCATAAAAACAAGGGCAATTAAGCCCCTGCGCGATGATTGCTGACTTC TTTTTCCAGAGCCTTATTAACAAAGGCATTCAACGATAAATCTTCTTCCATCGCCATTTCTGCTACCCGA CGATGCAGTTCTGGATCAAGCCTGACGTTAAACACGCCTTTAAACGGGGTATCAGGTTCCTTTCCATCCT CCACACAAGACTGTAAATACAGATCAACAGATGTTTTAAACTCCTGTTCCAGTTCAGCTAATGTAGAAGC CTCATAAGTTACCAGGTCCCGAATAAACGCCAGTTTTCCATACAGGACATTATTTTCAAAATCGGGTTCA ACCGTGCCTAAATATCCTTTATATTTTAAATGTTTCATAATAATCCAGCCTCTTTCAGATTCTGTTTAAT TGCTTTCAGCGTACCACCTTTGATATAACTTTCCGGATGTGGACGATGCATTAATATGGTGTGATTGATT TCAGCATTGAAAAACCGCACTCTTGACCCCTGCATTTCCTTTTTGACATATCCCAAAGAGGAAAACAAAA CGACCAGTTCATCCCATTCAAACGTTTTTTTACTGTTTAAAAACTTTGCCAGTAGCTTATCTGTTTTCCC CATAAATCGGGGTCAGTTTGGATATCGGAAATTATTGTACGTTAAGGCTATTTTTTAATCAGGCTCAACT TCTTTATAGCGGGTCTAAATGTGACAAATCAGGAAAGTACTATATCTGTCTTGTCAGCTGTTTCGCGACT GCTGCCGGTAGTACATCACTTTCTGATGCCGTTCCCGATCAACCTGCTTGACCCGATATTTACCTAAAGT ATGGGCTCGTTCAATTCCCTGCTTTTGTCGCAGGAGACGACTCTGCTAGTCCTTATGGGGGCCGCCTAGG AAACGGGAATATTGTATTATTCCAAAGTGATTTTCTTTGTTTTTTAGGTAAAATGCCCAGTGGAAATGTT AATGCTATATAGAAAAGGAATTAAAATGGCTAAAGTTAGCTTCTGTGACAAGTTGGTTTTTAATGAGTTT AAGGTATATGCTTCGTCATTATTCGGTTTTATTAGTGGGATAGTCATATTTGTAGATATACCAGCAAGTC AGAAAATCATGTACGGCATACTTTGCATTGTGCTTTTAATTGTTTGTTATATCTGGATATGGAAGAGAGC TAACAAATTAAGAGAGATAAATATAACGATTGAAGAGAGTAATGTTATTATTAAAACCGGTGATATTTTC AAGCAAGATGGATTAAAGGTTATTCCATTTAACGAATATTTTGATACCCAGGTTGATGAAAAAATTATCG CCGAGACAAGTCTTAATGGTAAATTTATTAAAAAATATCTACAGTGTCCCGTAGGTGAGCTAGATGACTA CATAAGTAACTATCAATTTGATATTGAAGAAAAAAAAGACATCAATGAAAGCCGAATTAATGGAAAGAAG CAAAAATTTGAAATTGGTACTATATGTGTTTATGGTGATTACATACTTACTGCCCTTTCTAAATTCGATC AGTATAACCAAGCTCATCTCACCATGCCTGAATATCTTGGCTTTTTAATAAATTTCTGGGACAAAGTTAA CCGTGTTTATGCTCAAAAAAGTGTATCGGTACCTATATTTGGATCTGGTCTTACGCGGATAAAAGGACAT AAAACAATTGATGAGCAAGATCTGCTAAAAATAATGTTATGGACTTTTAGAATAAGTGAAATGCGTTTTA AATACCCAGCAAAATTGACAATAGTGATATATGAAGGAAAGATCGATAAAATTAATCTCTTTGAGTTACA AAAAGCACGAAATGGTTTGTGAATTTTAAAGCTGTTTGTTTTTCAGACTATGTGTCATTTCTTTTTTTAT GCTGTTTTGAAATGACACATAACATTGCTTCACAAAATAAATTAAATATATTAACTTAATGCTTTTTTAA CTGCTTGATAATTCCAGTAGTAACTCCCATTTTCATAAGTACACATAGCCACATGTTCCCCAACGTTTCT TATTACATCAGGGCATTTTGACTTATCAACCGATGCTGCGTTATATAAGACGACTATTTTTAACTTATCC TCTACCGCTCTATTGCATTCATATTCAATATAGCTTTTATTATCTATACTGTGCCCTCTGGCACAACTAC CGGTCCAACTATTGTAGCTGGCACAATATTGACAACGACCACTCCGTGCTGTTTTTGTATTGGAACCAAC TATTAGGACAAATGTTTTTGATGCATTAAGTCTTGTATTTAATGATGATTTTATACTGCAATTTAAGCTA CCATCTCGTGCTTGGGTAAGATCGTGTGCATCTGTAAATGATAAACTCAAATGTTTACTATCATTCCAGT CATGTAGTTTTTGAATGGCGTCCTTATCACCGTCCCATTCCCCAGCAATATAGGTTTTTGTACGATAGTT CATTATTTTTACTCCTTTAAATTTAAAAATTAATTTTCACTAAAATAAGGTTTTATATACTCAGGTTTAA CCTGTCGGTATTGTGCCTGTATGCGGCATATCTGGGAGGGACTATACCCTGTTGCATCAGCTGTTTCTTG AATACTCAGTTTTTTAACTTGACGGTAGTACAGTACTTTCTGGTGTCGCTCAAGATCAGCCTGCTTACCT CGATATTTACCCAGTGTATGCGCACGCTCAATTCCCTGCTTTTGCCGCTGACGACGGCTCAGCCAGTCCT TATGTGACATTGCGGCCATCAAGTCGATAAGCATATTATTGATGGCGGTTATCACCGCGCGGGTAATCGG GTCAGCCTGCGAAGGGTCTTTATCTGACAGTGCCTGCCATGAGGTGGGAATATCTAGGCTGACAATCCGC AGCTCGTGCTGTTCGATCTGCTTTTTCAGCGTTATCCAGTCGCTGTTGCTGAGACGGGTCAGGCGGTCTA TCTGCTCGACCAATAAAATATCATTGCGGTGACTGTCCATCAGTAAGCGTCCCAGCTCCGGGCGGTCAAG TTTTGTACCGCTGATGTTCTCCCGGTAGTAGCTGGCTATTTTATGTCCCCGTTCCTGAACGAATTGCTCC AGCATCTCTTTTGCCCGATCGGTGAACTGCTCATCCGTCGATGCCCTCAAATAAGCTCTGATGAACATTT TTTCACCACATTATCGCATTTAGGTTATTGCACTTAATCTATCGCATATAGGTTATGTCATTCATCGTGT GCCGTCACGTTTTGGTTATAGCGTCAGGGTGTACCCTTATGCGATAACCTGTTTCGTTAAAAGTACTATG TGAGGTATGAATATGGCACGGAGGCAGATTCTTTCGCAGTCGGAAAGAGAATCTCTACTGGCATTGCCGG ATGATGAATTGACCCTGACCCGAATGGCATATTTCAGCGAACATGACCTGGCTCTTATTAATGCTCATCG CAAACCAGCCAGTCGTTTTGGATTTGCAGTTCTTCTTTGCTATCTGAAAAATGTCGGTTTTGCTCCTGAT AAGAAAACGCCCCCCTCTGATGCATTGTTAAAACCCATAGCCAACAGGTTAAAACTTGCCGATGGGCTAT GGTCCTCTTATATCAACGGTAGGAAGACTACTCGACGCGAGCATTTAACCGAGTTGTACCGTTATCTTGG TGTAAAAGCATTCACCAACAAAATACAGCAGAGTTGTATTACACATCTGTTGCCAATGGCGACTCGTACC GACAAAGGCATTCTCCTGGCGGAAGAAATGCTGGCCTACCTTCGGCAAAACAAGGTTATGTTTCCTACGA TTGATGTTGTGGAACGTACCTGTGCGGAAGCTATGGCTGGCGGCGATAAAATAGTCTTTCAGACGCTAAA TGCGCCCTTAACCTCTGCTCACAGGGAAGCTTTGGATCGTTTGCTTGAATCATCAGACAATCAACCTTCC CGGCTGACCTGGCTTCTGCAACCGCCAGGTAAAATCAACGGTAAGAATGTACTGCAACACATTGATCGGC TGAACAGTATTGAATCACTGGCATTGCCGGAAGGTATTGATCGTACCATTCATCAAAACAGGTTACTGAA ACTTGCGCGAGAAGGGCGAAAGATGAGCAGTAGGGACCTGACTCGATTTTCAGCAGCCCGACGTCATGCA ATTCTGGTGTGTGTCCTGGAGGATGCCAGAGCTACGCTGACAGATGAAATTATTGAGTTACATGAACGAA TATTGAACAGTTTGTTCAACAAGGCCAAAAAAACACAGGCTGAACGTCTTCAACAAACAGGAAGGTTAAT CCAGTTAAAATTAAAGCAGTATATTGATATCGGACAGGCTTTATCTGAGGCCCATGATTCCGGTGAAGAT CCATGGCTTGCTATAGAAAAAATATTGCCATGGCCTGAATTTATTGCCAGCCTGGAAGAAACTCGTCATC TTGCCAGAAAGAATAATTTTGACCCGCTACATATTATTACCGAAAAATACAGCACATTACGGAAATATGC TCCGCGTATGTTATCCACCTTGCAATTAGTTGCTACACCGGCAGCACAGGCGCTGGCTGATGCGTTGCTT GTAATCAAAGATATGTACAAGAAACAGTTACGAAAATTCCCGGCGACAGCTCCGCTTGAGTTTGTTCCTG AAAGCTGGCGAAAAGTGGTGATAACTCCCTCTGGTATTGACCGACAATACTATGAATTTTGTGCACTTAG TGAGCTGAAAGGGGCGTTACGTTCCGGGGATATCTGGGTTAAAGGCTCACGACGTTACAAAAATTTCGAC GATTACCTTATTCCAGAGAAAGACTTTGATAAGCTCTCGCCTGCATTACCACTACCTGTTTCTGCTGATT ATCATGAATATATTACAAATCGAATGATACTGCTTCAGTCAAAACTGGAAGAGGTCAACAAAATGGCCGT ACACGGTGAATTGCCAGATGTGGAAATATCTGACAAAGGAGTAAAAATCTCCCCTCTGGATAATTGTGTT CCTTTGCAGGTCTCACCGCTTTCAGAGTTAATTTACAGTATGTTACCGCGTCCTAAAATCACAGAAATTC TCGACGAGGTAAACAGCTGGACAGCGTTTACCCGACATTTTTCACATATAAAAAATGATATAACTCGTCC CGATACACGCCTGCTTCTTACCACAATTCTTGCTGATGGCATCAATCTTGGCCTGACGAAAATGGCAGAG GCCTGTCCCGGATGCACTAAATCATCACTCGAAGATATTCAGGCCTGGTATATCCGTGATGAAACTTATT CCGCAGCCCTTGCAGAGCTGGTGAATGCTCAGGGAAAAAGACCTCTGGCAGCATTCTGGGGAGACGGAAC AACTTCATCATCAGATGGGCAGAACTTCAGAACTGGTAATTCTGGTCGTTATGCTGGGCAGATTAACCCG AAATATGGGCAAGAGCCTGGATGCCAGTTTTATACACATATATCAGATCAATACAGTCCGTTTTACACCT GTATAATCAGTCGGGTCAGAGATTCAACACATGTGCTTGATGGATTGTTGTACCACGAAAGCGACCTGGA TATCAGGGAACATTACACAGATACAGCGGGTTTCACCGATCATGTTTTTGCTCTGATGCATCTGTTGGGT TTTGCATTTTGTCCCCGGATTCGGGACCTTCACGATAAAAAACTTTTCATTAAAGGTAAGGCGGATCAAT ATCCGGCACTTCATTCTCTGATATCTCCGACCCGCATTAATCTGAAAGAAATAGAAATTCACTGGCGTGA AGTGCTACGTCTGGCGACCTCAATAAAACAGGGAACAGTAACAGCATCCCTGATGCTGAGAAAACTTGCC AGTTACCCCAAACAAAATGGGTTGGCTAAAGCTCTGAGAGAGATTGGCCGTATAGAACGGACACTGTTTA TGCTGGACTGGTTCCGGGATCCGGCATTGCGGCGACGTGTCCAGGCCGGGCTGAACAAAGGAGAAGCCCG TAATGCTCTGGCCCGTGCTGTATTCATGCATCGATTGGGGGAGATTAGAGATCGGAAACCGGAAAATCAA AGTTATCGTGCCAGTGGATTGACTTTATTGACGGCGGCTATTTCCTTATGGAACACAGTTTACATGGAAA GAGCGGTTGATGCTCTGAAGCGTAAGGGCATGAAAATTAATGCTCAACTATTATCGCATTTATCACCATT AGGTTGGGAACATATCAATCTGACAGGCGATTATATCTGGAAAAACAACCGGATACCGACTTCAGGTAAG TTTCGTCGTTTGAGATCAGTTAAGATCGACAAGGTCAAAAAATAACCTTAACGTACAATAATTTCCGATA TCCAAACTGACCCCAAATCCATCCCCTATAGATATGCAACTAATTATAGTTACACATGGCATTTTTGTCA AAAAATACAAAGGGGCAGAAAGCCCCTTTTTTTATTTAAAACATTTCATACCCTTGCAAGTAGTTTAACC ACCACCGGAATTGATCCCATTCGCTAAATTTCATTGCCGGAATTCTGGTTTCCCAGCCTTTGACAAGGGA ATCAGCAAGCTGTACGATCTGCCGCGTTGACATTTAAAAACCTCATTCAGTTTTGATTGTCGATAACGTG ATCAGGTTGGTGGAACAACCTGATCACACCTTGAATAGTCAGTCATTACCCTCCTTCTTTTCTATAGTTA CTGTGTATCCGTAAAGAGTCAAAATGCGATAAGCATCCAACGCCTCACGCTCACTTTTAAATGTTCTGAC TTCGTGTAATCCTTTACCTTTATCAAGGGATACACAAAACTCATAATCTTCTTCTACTTCTATCTTTTTA ATTAATTTATCAAGTTCGGCTAATGTTCGTTTTGGCTCAAAAAGAAATGTGCATTGTACAATGGCGTTTA AATCTTCCCGATCAAGCTCTAACAGAGCATCATTATAAGCAGCTTTAAAACAGCGATTATTACGCAGATC AGATGCAAACTGCATTGCGGCTTGTTTTAACGTTTTCATGAATTTCCCTTGCATTGATGTTAATAGACAA TTTCAGAATCAATATTGAAATTTCCAGAAAATGCAGGGATGCCCCTGCATTCATAATGCTTAACAAAGAC ACTCAATAAAATCTTTAAAACTCAAGCATTCATCGCCATCTTTTAATGAATCAAAATATTTTTCATATTC GTCCCTGTAGAAAAGGACTAAATCAACATCACTCTGCTTAAGTTCGCCAAACTGAGGAACAATTCCGGCT TTATAGTCACGAATTTTATTGTTATCAGTAAATATGACAACATACTGTTGTCCAGTATCCTTATGCATAA GGATAATAGTGCAAAGCGTTACTCGTTCGAATGTGAAAACATGATTAGTGGTTGAAGTAAAAACAGATGA GCATTTCATTTTAATCTCCTGCCCTGCTGGGCTATTGTGAGAGGGGCCATTCCCCTTTCGATGAAACAAT AATACGACCTTTAAGTCGTATTTGCAAGTTTTCTCCCGTTTTTTTACTCGATAAGTGATTGTTATCACGT TTTTTAATCCGCGTAAGCGGATGGAAGGGGCGAACGAAAATACCAGGGCAGCACAGGAGCCACATCGCCC CGAAGCGCGGCGCAGCCGCTGACGAACGTACCAGGGTGCACAGGCCATCCCTTCACCCTGCAAAGCCCAA CTGACCAGCAGGCCACTGACCAGCAGGCCATGATTATGCTGATTTGCGCCGCAGAATGCCGCAGTTAGCG CGAGCGCAAGCGAGTTTACCCCGCCCTGGTGCATTGCAGCATGGCGGGGCGCTGTACTGCGCGTGTGAGC GTCAGCGAGCTACGAGCGCAACTCCAGGTACTAATATAAAACCATCACAGGTCATTTTATTTTGACTCCC TTTTGCAGAGCACGTATTCAGGATGTTCTCCTGCAAGTAACAAAAGAAACTCAAACTCAACCAGTGACAG ACTTTGACTGTTTTGAGTATTAACTTCCTCTTTTTTCTGCCAGGTTCTTAGCCCAACACCATAAATATGA CTGCATTCCTTTTGTGTTAATCCTGCTTTTAAACGTAATTTTTTTACATTTTCAGGTGTATTATCGGGTT TCATTTAACATAAACTCCTTAATTAAATTCTTAACTGGCGTCTCATCGTCTTCCCTTAATCCGGCACACG TAAAATCAATATGTTGTAATTCATTCTCATTCAGTACAGCATCATACAATGTAATTTTCGTAGTTTTGTT CCCGATTTTAACATTTGTTCTGGCTTTTATCCTTTTTGTAAGCCTGTAATTGTCACCTTCTTTTTCAAGA AAATAAGTCACATCACCTTTATTTTTTCTCATAACTGTTTCAAATACCCTGTAATTTTAACAAGTTGATC TATACTCAAGCCCCGAATCTGTAAATCATAACTGTCGCCCTGTTCGGTGACTTTACCGTTCAATCCGTTT TCAGCTTTAAAGCCTGTCAATGCCCCATACCAGCTTTCAAGCTGGACAAGTTGCGATAACATACCTTTCA GGATCAGAATTTCGTCCTTTTTTTCCACCTGGTGTTTCTCATACTCAATCGCCTGTAACACCTCCTGCGA AGCATTTACCAGAATTTTTCGCTCGATATCGGCTGCAATATCAACGGGATTCCGTTTTCTGGATAACGTG CAAACATGATGCGGACTACGCCAGGAACGACTATCCACACTCCCCACCACAGAAAAGCGGTCTTTTTCCA TCCGAATATGCACAGAGTAATTTTTAAACTGCGGTGACGTCAGTTTTATACGAGACGAACAATCATCAAG TTTGTTCACGCGCCAGCCGTTCCCCAGGATACGGCAGACAACTTCAAAGACAGGGTGATATTGTTCAAAA AAAGAGTTCATCTGTTTCCCTTTTTGCTACGTGGCTGCTGTTCCCGTCTTTTTGGGTTCGATGCCCCAAA AGACGGGCTGGCTATAATATCGGGGGCTTCTCGCCCCCGTTCTGGTTACGCTCTGGTTTCCACGCGTTGC CACCCTGTCGCCCTGCGCTGTCCGGTTGTACCGTATTTTGCGCGGATTTCTTCTATCGTGTGTTCTTCAC GATTCCAGTAACTTTTATGTTCGTCTGGACGATAAAACCATTGTTTTTTCTTTGCCGCCCATTTACACCC GATTTCTTTTAAAGTTTCCTTATGTGTAATGGTTTCTCCACTAATCCAGACCCAGTTACCTATCACTTCA AATACCAGACCAGATAAACCAGAAAGAACGTTTAATACTTTTTCCAGGTCATCACCGTAATTATATCGTG CATGTTCATCAGTGCTCTGGAACTGATTTATTTTATCAATATTTGCCATCAATACATCAAAAGCTGCATT TACCGCTTTCATCAGTTCAGCCCCTAACGGGTTACGATCTGGATGATATTTTAAAGCGGCTTTTCTGTAT GCTGCTTTGATATCTTTTTCAGTTAATTCGCCGGATAATCCAAAAACGTTTAATGCTTCCTGGATATTCA T
Region | 1 |
Region Length | 14.1Kb |
Completeness(score) | incomplete(30) |
Specific Keyword | integrase,transposase |
Region Position | 23291-37431 |
# tRNA | 0 |
# Total Proteins | 14 |
# Phage Hit Proteins | 6 |
# Hypothetical Proteins | 6 |
Phage + Hypothetical Protein % | 85.7% |
# Bacterial Proteins | 2 |
Attachment Site | yes |
# Phage Species | 5 |
Most Common Phage Name(hit genes count) | PHAGE_Entero_mEp234_NC_019715(2) PHAGE_Klebsi_Matisse_NC_028750(1) PHAGE_Aeromo_65_NC_015251(1) PHAGE_Clostr_phiCD27_NC_011398(1) PHAGE_Staphy_StB27_NC_019914(1) PHAGE_Cellul_phi4:1_NC_021788(1) PHAGE_Clostr_phiCD146_NC_028958(1) PHAGE_Cellul_phi17:2_NC_021798(1) PHAGE_Burkho_ST79_NC_021343(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Entero_HK106_NC_019768(1) PHAGE_Aeromo_CC2_NC_019538(1) PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403(1) PHAGE_Bacill_BMBtp2_NC_019912(1) PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1) |
First Most Common Phage # | 2 |
First Most Common Phage % | 14.28% |
GC % | 41.12% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NHOE01000122.1| Klebsiella pneumoniae strain 3111F plasmid pPOAMCR-1KP, whole 38942, gc%: 41.83%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 16 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | 23291..23303 | attL | 0.0 | Showinfo_outline |
2 | complement(28021..28368) | PHAGE_Entero_mEp234_NC_019715: HicB protein; B7475_28660; phage(gi428782291) | 4.66e-25 | Showinfo_outline |
3 | complement(28365..28613) | PHAGE_Entero_mEp234_NC_019715: HicA protein; B7475_28665; phage(gi428782292) | 4.13e-11 | Showinfo_outline |
4 | complement(28695..28907) | hypothetical protein; B7475_28670 | 0.0 | Showinfo_outline |
5 | 28962..29822 | hypothetical protein; B7475_28675 | 0.0 | Showinfo_outline |
6 | complement(29921..30433) | molecular chaperone Tir; B7475_28680 | 0.0 | Showinfo_outline |
7 | complement(30460..31128) | PHAGE_Staphy_StB27_NC_019914: integrase; B7475_28685; phage(gi431809677) | 3.33e-06 | Showinfo_outline |
8 | 31277..34255 | PROPHAGE_Xantho_33913: Tn5041 transposase; B7475_28690; phage(gi21231545) | 1.49e-36 | Showinfo_outline |
9 | complement(34599..34949) | hypothetical protein; B7475_28695 | 0.0 | Showinfo_outline |
10 | complement(35040..35258) | PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403: hypothetical protein; B7475_28700; phage(gi414087578) | 1.70e-05 | Showinfo_outline |
11 | complement(35343..35714) | molecular chaperone DnaJ; B7475_28705 | 0.0 | Showinfo_outline |
12 | complement(35807..36034) | hypothetical protein; B7475_28710 | 0.0 | Showinfo_outline |
13 | complement(36021..36272) | hypothetical protein; B7475_28715 | 0.0 | Showinfo_outline |
14 | complement(36269..36811) | hypothetical protein; B7475_28720 | 0.0 | Showinfo_outline |
15 | complement(36916..37431) | PHAGE_Cellul_phi4:1_NC_021788: DnaJ domain containing protein; B7475_28725; phage(gi526176846) | 2.34e-10 | Showinfo_outline |
16 | 37181..37193 | attR | 0.0 | Showinfo_outline |
>23291..23303
TTTAATACTTTTT
>complement(28021..28368)
[Klebsiellapneumoniae]
>complement(28365..28613)
[Klebsiellapneumoniae]
>complement(28695..28907)
[Klebsiellapneumoniae]
>28962..29822
[Klebsiellapneumoniae]
>complement(29921..30433)
[Klebsiellapneumoniae]
>complement(30460..31128)
[Klebsiellapneumoniae]
>31277..34255
[Klebsiellapneumoniae]
>complement(34599..34949)
[Klebsiellapneumoniae]
>complement(35040..35258)
[Klebsiellapneumoniae]
>complement(35343..35714)
[Klebsiellapneumoniae]
>complement(35807..36034)
[Klebsiellapneumoniae]
>complement(36021..36272)
[Klebsiellapneumoniae]
>complement(36269..36811)
[Klebsiellapneumoniae]
>complement(36916..37431)
[Klebsiellapneumoniae]
>37181..37193
TTTAATACTTTTT
Questionable (score 70-90)
Incomplete (score < 70)
Viewer Options
Click on a region in the genome above to show details here.
ORF Start: 23291
ORF Stop: 23303
Strand: Forward
Protein Sequence: TTTAATACTTTTT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attL
Homolog/Ortholog E-Value: N/A
ORF Start: 28021
ORF Stop: 28368
Strand: Backward
Protein Sequence: MKHLKYKGYLGTVEPDFENNVLYGKLAFIRDLVTYEASTLAELEQEFKTSVDLYLQSCVEDGKEPDTPFKGVFNVRLDPELHRRVAEMAMEEDLSLNAFVNKALEKEVSNHRAGA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7475_28660, HicB protein, phage(gi428782291), PHAGE_Entero_mEp234_NC_019715
Homolog/Ortholog E-Value: 4.66e-25
ORF Start: 28365
ORF Stop: 28613
Strand: Backward
Protein Sequence: MGKTDKLLAKFLNSKKTFEWDELVVLFSSLGYVKKEMQGSRVRFFNAEINHTILMHRPHPESYIKGGTLKAIKQNLKEAGLL
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: B7475_28665, HicA protein, phage(gi428782292), PHAGE_Entero_mEp234_NC_019715
Homolog/Ortholog E-Value: 4.13e-11
ORF Start: 28695
ORF Stop: 28907
Strand: Backward
Protein Sequence: IQYSRFLGGPHKDQSRLLRQKQGIERAHTLGKYRVKQVDRERHQKVMYYRQQSRNSQDRYSTFLICHI
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28670, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 28962
ORF Stop: 29822
Strand: Forward
Protein Sequence: MLYRKGIKMAKVSFCDKLVFNEFKVYASSLFGFISGIVIFVDIPASQKIMYGILCIVLLIVCYIWIWKRANKLREINITIEESNVIIKTGDIFKQDGLKVIPFNEYFDTQVDEKIIAETSLNGKFIKKYLQCPVGELDDYISNYQFDIEEKKDINESRINGKKQKFEIGTICVYGDYILTALSKFDQYNQAHLTMPEYLGFLINFWDKVNRVYAQKSVSVPIFGSGLTRIKGHKTIDEQDLLKIMLWTFRISEMRFKYPAKLTIVIYEGKIDKINLFELQKARNGL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28675, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 29921
ORF Stop: 30433
Strand: Backward
Protein Sequence: MNYRTKTYIAGEWDGDKDAIQKLHDWNDSKHLSLSFTDAHDLTQARDGSLNCSIKSSLNTRLNASKTFVLIVGSNTKTARSGRCQYCASYNSWTGSCARGHSIDNKSYIEYECNRAVEDKLKIVVLYNAASVDKSKCPDVIRNVGEHVAMCTYENGSYYWNYQAVKKALS
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B7475_28680, molecular chaperone Tir
Homolog/Ortholog E-Value: N/A
ORF Start: 30460
ORF Stop: 31128
Strand: Backward
Protein Sequence: MFIRAYLRASTDEQFTDRAKEMLEQFVQERGHKIASYYRENISGTKLDRPELGRLLMDSHRNDILLVEQIDRLTRLSNSDWITLKKQIEQHELRIVSLDIPTSWQALSDKDPSQADPITRAVITAINNMLIDLMAAMSHKDWLSRRQRQKQGIERAHTLGKYRGKQADLERHQKVLYYRQVKKLSIQETADATGYSPSQICRIQAQYRQVKPEYIKPYFSEN
Homolog/Ortholog Species: Integrase
Homolog/Ortholog Protein: B7475_28685, integrase, phage(gi431809677), PHAGE_Staphy_StB27_NC_019914
Homolog/Ortholog E-Value: 3.33e-06
ORF Start: 31277
ORF Stop: 34255
Strand: Forward
Protein Sequence: MNMARRQILSQSERESLLALPDDELTLTRMAYFSEHDLALINAHRKPASRFGFAVLLCYLKNVGFAPDKKTPPSDALLKPIANRLKLADGLWSSYINGRKTTRREHLTELYRYLGVKAFTNKIQQSCITHLLPMATRTDKGILLAEEMLAYLRQNKVMFPTIDVVERTCAEAMAGGDKIVFQTLNAPLTSAHREALDRLLESSDNQPSRLTWLLQPPGKINGKNVLQHIDRLNSIESLALPEGIDRTIHQNRLLKLAREGRKMSSRDLTRFSAARRHAILVCVLEDARATLTDEIIELHERILNSLFNKAKKTQAERLQQTGRLIQLKLKQYIDIGQALSEAHDSGEDPWLAIEKILPWPEFIASLEETRHLARKNNFDPLHIITEKYSTLRKYAPRMLSTLQLVATPAAQALADALLVIKDMYKKQLRKFPATAPLEFVPESWRKVVITPSGIDRQYYEFCALSELKGALRSGDIWVKGSRRYKNFDDYLIPEKDFDKLSPALPLPVSADYHEYITNRMILLQSKLEEVNKMAVHGELPDVEISDKGVKISPLDNCVPLQVSPLSELIYSMLPRPKITEILDEVNSWTAFTRHFSHIKNDITRPDTRLLLTTILADGINLGLTKMAEACPGCTKSSLEDIQAWYIRDETYSAALAELVNAQGKRPLAAFWGDGTTSSSDGQNFRTGNSGRYAGQINPKYGQEPGCQFYTHISDQYSPFYTCIISRVRDSTHVLDGLLYHESDLDIREHYTDTAGFTDHVFALMHLLGFAFCPRIRDLHDKKLFIKGKADQYPALHSLISPTRINLKEIEIHWREVLRLATSIKQGTVTASLMLRKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPALRRRVQAGLNKGEARNALARAVFMHRLGEIRDRKPENQSYRASGLTLLTAAISLWNTVYMERAVDALKRKGMKINAQLLSHLSPLGWEHINLTGDYIWKNNRIPTSGKFRRLRSVKIDKVKK
Homolog/Ortholog Species: Transposase
Homolog/Ortholog Protein: B7475_28690, Tn5041 transposase, phage(gi21231545), PROPHAGE_Xantho_33913
Homolog/Ortholog E-Value: 1.49e-36
ORF Start: 34599
ORF Stop: 34949
Strand: Backward
Protein Sequence: MKTLKQAAMQFASDLRNNRCFKAAYNDALLELDREDLNAIVQCTFLFEPKRTLAELDKLIKKIEVEEDYEFCVSLDKGKGLHEVRTFKSEREALDAYRILTLYGYTVTIEKKEGND
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28695, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 35040
ORF Stop: 35258
Strand: Backward
Protein Sequence: MHKDTGQQYVVIFTDNNKIRDYKAGIVPQFGELKQSDVDLVLFYRDEYEKYFDSLKDGDECLSFKDFIECLC
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28700, hypothetical protein, phage(gi414087578), PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403
Homolog/Ortholog E-Value: 1.70e-05
ORF Start: 35343
ORF Stop: 35714
Strand: Backward
Protein Sequence: MHQGGVNSLALALTAAFCGANQHNHGLLVSGLLVSWALQGEGMACAPWYVRQRLRRASGRCGSCAALVFSFAPSIRLRGLKNVITITYRVKKREKTCKYDLKVVLLFHRKGNGPSHNSPAGQEI
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: B7475_28705, molecular chaperone DnaJ
Homolog/Ortholog E-Value: N/A
ORF Start: 35807
ORF Stop: 36034
Strand: Backward
Protein Sequence: MKPDNTPENVKKLRLKAGLTQKECSHIYGVGLRTWQKKEEVNTQNSQSLSLVEFEFLLLLAGEHPEYVLCKRESK
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28710, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 36021
ORF Stop: 36272
Strand: Backward
Protein Sequence: MRKNKGDVTYFLEKEGDNYRLTKRIKARTNVKIGNKTTKITLYDAVLNENELQHIDFTCAGLREDDETPVKNLIKEFMLNETR
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28715, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 36269
ORF Stop: 36811
Strand: Backward
Protein Sequence: MNSFFEQYHPVFEVVCRILGNGWRVNKLDDCSSRIKLTSPQFKNYSVHIRMEKDRFSVVGSVDSRSWRSPHHVCTLSRKRNPVDIAADIERKILVNASQEVLQAIEYEKHQVEKKDEILILKGMLSQLVQLESWYGALTGFKAENGLNGKVTEQGDSYDLQIRGLSIDQLVKITGYLKQL
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: B7475_28720, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 37181
ORF Stop: 37193
Strand: Forward
Protein Sequence: TTTAATACTTTTT
Homolog/Ortholog Species: Attachment site
Homolog/Ortholog Protein: attR
Homolog/Ortholog E-Value: N/A
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download