gi|00000000|ref|NZ_CP039546.1|  Methylorubrum populi strain YC-XJ1 chromosome, complete genome. 5395646, gc%: 69.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1094473..1098204                   PHAGE_Geobac_E3_NC_029073: putative B12-dependent class II ribonucleotide reductase; E8E01_RS05450; phage(gi985758418)     2.05e-178           MethylorubrumpopuliMRFERRYTTSGQSPYASIAFRKAVSEIRNPDGSIVFRLDGISVPESWSQVAADVLAQKYFRKAGVPARLKRVEENSVPSFLWRSVPDEAALAALPEEERYVSEISSTQVFDRLAGCWTYWGWKGGYFSSEEDAAAFMDELRFMLARQMVAPNSPQWFNTGLHWAYGIDGPSQGHFYCDPKTGALTKSATAYEHPQPHACFIQSVQDDLVNEGGIMDLWVREARLFKYGSGTGSNFSMLRAENERLGGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVIVDIDHPDIEAFIDWKVKEEQKVAALVTGSKVVSKHLTAVMKACIQCEAEGDACFDAERNPALKREIKAARKAMVPDAYIKRVVQFARQGFTKIEFPVYDTDWDSEAYLTVAGQNSNNSVSLTDTFLRAVEADGDWSLTARTTGKVSKTLKARDLWEKIGEAAWASADPGLHFNTTMNDWHTCPTGGRIRASNPCSEYMFLDDTACNLASANLLTMYDRQAKHFDVEAFEHLNRLWTVVLEISVMMAQFPSKEIAELSYKYRTLGLGYANIGGLLMTMGLPYDSDQGRALAGALTAIMTGVAYATSAEMAAELGTFEAYPENADHMLRVIRNHRRAAHGEATGYEGLNVAPVPLDHANIPQGDIGAHARAAWDRALSLGEQHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDALRALGYRESEIAEIEAYAVGHGSMGQAPAINPGSLRAKGFSDDKIAAVEAGLKSAFDIKFVFNRWTLGDDFLKDTLKVPAEKLADPTFELLPFLGFSKKEIEAANTHVCGAMTLEGAPFLKREHYAVFDCANPCGRTGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCKAAYLLSWRLALKANALYRDGSKLSQPLNAALIADDEDEAEDALEAIIQAPAAAKAAAAAEKIVERVIERVERIRSREKMPDRRKGYTQKAVVGGHKVYLRTGEYDDGRLGEIFIDMHKEGATFRSLMNNFAIAISLGLQYGVPLEEYVEAFTFTRFEPAGFVQGNDAIKNATSLLDYVFRELAVSYLGRTDLAHVNPAEIGGTVLGGGEGDTTRESAKPAPAASAIVSRGLLRGSADRLTLIQGGPGNATTGVAAAATGQSAPAGGTVHAVHGATALKAEPQSVGSVETLPFAKPEAKAERSVADRRAEAKMKGYVGEACPECANFTLVRNGTCLKCDTCGSTTGCS
1098511..1098762                   DUF4365 domain-containing protein; E8E01_RS05455                                     N/A                 MethylorubrumpopuliMNAPVKIVAKSKLSEWRGLDRIGLLVHGMRCIWREQEKDDVGIDGEIELCRPRSDGDGAIATGKIVKVQSKSGSSFVIRDGDD
1098825..1100008                   PROPHAGE_Xantho_33913: IS1477 transposase; E8E01_RS05460; phage(gi77747809)          1.11e-52            MethylorubrumpopuliMGTKRHKPEDVVAKLRQVDVLVSQGQSVAEAIRAIGVTEVTYYCWRKEYGGLKSDQVRRMKDLEVENQRLCKAIADLTLDKLILQEAAPGKLTSPARRRACIAHVMNVLDVSERRACRALGQHRSTQRKVPRGREDEAALTADLVELARQYGRYGYRKIGALLKAAGWFVNDKRVERIWRREGLKVPSRQPKRGRIWDGDGSCLRLRAERRDHVWSYDFVEARTHEGRKFRMLNVVDEFTRECLAIRVARKLKAADVIDVLSDLFILRGMPGHIRSDNGPEFIAKSVQAWITGVGARTAYIAPGSPWENGYVESFNARLRDELLNGEIFYMLKEAQIVIESWRLHHNSVRPHASLGYRPPAPEVFVPAFTAWPAALTRSAPPAKRAVEQRPTLH
complement(1100063..1100356)       PHAGE_Paenib_Tripp_NC_028930: transposase; E8E01_RS05465; phage(gi971756982)         2.49e-11            MethylorubrumpopuliMSALLPAGQPGKPRVDDRRIVSGIVFVLQTRCRWQDAPEAYGPYMTLYNRYNRWTRRGVWRRIRLKVLASETECSILLNILDTLVRRGSNGGFGSSD
complement(1100519..1101307)       PHAGE_Escher_RCS47_NC_042128: DNA helicase; E8E01_RS05470; phage(gi100021)           2.28e-18            MethylorubrumpopuliMKTGKSRKELRHQRIMAVLESNPSARVNQLAEELEVSTETVRRDLAELDQVGRLNRTYGGAVSATNRFEPALNERLSLFVPERRAMARLAVELYAKNDALLLGGGATLLHLARALRDITHRLTVVTPAYPVAIELAANPLIEVMVLPGMFEPQEGIVCGPETVRALERFRAPVAIIGASGLNHDGVSEALISSAEVYSSIIRNADHCVVLADHSKFGKRALTLISDWSPRLSLITDIAPQPEIAAAMDKRGSKFAVAPTDVT
1101457..1102770                   PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; E8E01_RS05475; phage(gi100190)     1.94e-06            MethylorubrumpopuliMFDYGNFKFDSKAEVLDKASEYWNPGKTKFWKDAGIDLIIDRREGYFLYDMSGRRLIDLHLNGGTYNLGHRNRELVDTLKSALDHFDIGNHWFPSVARSAFAEKLVKTAPGMKYAIFGAGGAEAAEIALKSARYATKRRKIVSIIKGYHGHSGLSVATGDERFSKIFLADRPDEFIQVPFNDVDALEAALKTREVAAFIIETIPATYGFPLPNEGYLKACQDLCRKYGTKYIADEVQTGLMRTGVMWGWQSYGLSPDMFIAGKGLGGGIYPVSACVATEECGAWQAEDGAAHISTAGGAELGCVVGHKVIEMLERPELATNVHFVATHLRGELDKLMAEHPGELVSIRQRGVIFGLEFSDPEGAVAMSRALYEEGVWAIFSSLDKRVLQFKPGLLLDEATCREIISLFAIALTKLRATKEKSEAMKVDGMKVAYIGK
1103155..1104177                   substrate-binding domain-containing protein; E8E01_RS05480                           N/A                 MethylorubrumpopuliMSITRRAATLTLACLAVIGTGGAKAAEGDPKKVTTAEVREPASKACSKGRTYKIAYSHSVSEAAIVKQIRTFATRRATELGCVTVLHDNTQANNLEQQINAVQGWITLGVDAIVVTPIDVTALKPLQKQAQTKNIKWLTYLGRMDNSDGFVGFDHEQSGQLIANAAIDWVKSQGITKPRALVTTLTGLPLLSPRWTEVEKLFAKAGIEVVAKQDAADQATGLTVTETVLRQHPDLDIVIGLNDDAAVGANRAVTVAGISPDKFFIGGQDGSLEGLTAVNQGKAYKASAAILINDLGANIVDLSLNAINGDGPSFAYTPTVLATKKDQPLLDKLLANYGKK
1104226..1105749                   PHAGE_Bacill_G_NC_023719: gp245; E8E01_RS05485; phage(gi593777701)                   1.07e-15            MethylorubrumpopuliMASDIVKIVGLRKSYGQNDVLKGVDLTFRAGEVHAFVGANGAGKSTLLGCLSGATPPSSGKIIVDELPYDRMTPRSAIEKGIGIIYQHFQVIDDLSVVDNIFLGSEKTRFGLIEGKDQYHAARRLLERLGSTLDPNSQLADLSIGERQVVEIARALHLRPRVLILDEPTAALSDREMKALHKVVRHLVRNENLAVVYVTHLLDEIQEVADVVTILRDGLVVWTRPVQMAPVDEIAKAIAPRLDRSRKPRESSRHEAVVAELLDYSTDFVKEVSFDIRRGEVVGLYGLLGSGRTDLLESLVGARPRAGGEFRLNGSRVRFKGPGPALGCGVALVASDRNEQSLFGELSALENLLMPHFGGIARDQKIRRPLFEKAALSLGLTPKSPGLEAKRFSGGNAQKLVIGRWLLPQCKTKLLLLDEPTQGVDIGAREDLYRLLFEFTAGGGAILVASSDPAEIAAISNRVIILAHGQPVAVLEDDIQENRLVELAHLSKSIFESPRSAAIRAAE

#### region 2 ####
complement(1497953..1498582)       PHAGE_Pseudo_O4_NC_031274: hypothetical protein; E8E01_RS07210; phage(gi100020)      8.19e-28            MethylorubrumpopuliMDLSAVGRAVLIAREGRRLEAYRDSVGVWTIGIGHTAAAGPPIPRAGLRIDAAEADAIFARDVAAFVRTVAEALPEPLPQHAFDALVSLCFNIGPAAFRRSSVLRRLRAGDRLGAGEAILMWNRPAAIIPRRQGEFDQFRTPYEAALPRARRGDAQPVSTPVSAPVPAARPTVPPAARPSWRARLRDWLARAAPTASLRPDQDRSHDVH
complement(1498629..1499711)       PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E8E01_RS07215; phage(gi100020)     2.99e-36            MethylorubrumpopuliMADATPSLALPLIAGGQAQKHVTHNEALALLDALVQLTVLDKDRAAPPASPADGDRYLIAAGNPDGAWTGWSGRIARFQDGTWLSLKPQAGWTAYVADEAEPYLFTGSAWTPLRATLTALQNLSRLGIGTGADAENPFAAKLNKALWTALTTAEGGSGDLRYTLNKQASGNVLSLLLQSGFSARAEIGLTGDDELRVKVSPNGGDWFEALRIDRTTGRVAFSGRITSADVPVLTGQVIAGNSGPGAVAAGATRYFTHALVGGHQSEVYAAAGRRGRFRHLRVVTQGAPGAGERWTFTLQNLVTDTALTCAISGAGSNQAADLVNSAVFDADQRWCLKMVSSSGARPTTNILFSLLFEGLD
complement(1499738..1503640)       PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E8E01_RS07220; phage(gi100019)     0.0                 MethylorubrumpopuliMTTLVLQTAGEAVGNALGGPIGGMIGRVAGAAGGAALDDALFGTGTSPRFVDGPRLSELGGLASTEGAPMPRVYGRARIGGTLIWATRPLEVANTTVERSRSGAKGGGGGQKTVRTAYSYFANLAVGLCAGEIALVRRIWADGTELDLTTLAFRIHTGSAAQEPDPLIVAKEGAENAPAYRGLAYIVFERLPLSAFGNRIPQFAFEVIRPVAGLADRIRAVCLIPGSTEFGLDPLAVSEDAGLGSTKPANRFQLQGASDVVASLDALQALCPHLARVSVVTSWFGDDLRAGHCTVTPRVDATVKATTGQPWSVAGLTRATAHAVSRAGDTAAYGGTPSDAGLGRLVAELARRGLAVVLYPFVMMDVPAGNALPDPYRAGAVQAAYPWRGRITCDPAPDRPSSPDGAAAAADQVAAFFTGPRGYGAMIRHYAGLAAGWAAAGAGLAGFVLGSEFVGLTRVRGPADSYPAVDHLRRLATEVRARLGAGVSLVYAADWTEYGAHVRAGGASLRFPLDPLFADPAIDAVGIDYYPPLTDWRDGSDHRDAAEAASPYDRAYLKSRLGAGEAFDWYYASPEDRAAQRRTPITDGAYGKPWIYRAKDLVAWWSNPHVEREGGVETGPTAWVPRGKPIWLTEIGIPAVDRGTNGPNVFPDPKSSENARPPFSRGTRDDLIQSRGLDAVLSRFDPQTDGFEPAHNPVSPLYGGRMIAAEDIFVWAWDARPFPAFPDFTSVWSDAANWALGHWITGRIEGLELDRLVAAILADLGIDAPLDIDAAGFLDGAVLDRPLSAREALEPLARLFGLDVSVTAGRLRIRDGRSRAPAVIDAGDLVLGAEDAPLRRVRAQESELPRTLTIGFSDSESPDYRRATAAAARPAGGRRQEVRVEAAVVTRREAAQALAETVLDTALAGRDTAAFGVSPCRIDLEPGDLVVLPGDTRGTLHRITRIDDGPTGRRIETRGVPLPRPDPVSAASLPRPGRMPPALPGPVFALPLVLPVERGDPVPLSYLAVSADPWPGAVAVWRAAGEGAPFGLHRSLDHPACLGRTLTPLPPGPLWRFDRNARLDVALRHADGLSSIGEAAALAGGNLFALLGADGAAEILSAAKAELIGAGTWRLSGLLRGLAGSEAAAGRRAEAGSLIVRLDDGAVGPLVDRIDEAGRRFLYRVGAAERDPADPSVVGFAATADLTAFLPLSPVHLRARREAEGIRLSWTRRARRDADAWEPADIPLDADSQGYRVDILGQEGRTLRSLTAEATSALYAGADEIADFGTALTEIAFSVAQLGRLAGAGPARRARVSLRT
complement(1503667..1504125)       PHAGE_Rhodob_RcCronus_NC_042049: exonuclease A; E8E01_RS07225; phage(gi100018)       8.51e-14            MethylorubrumpopuliMDDASPLAGRIVAEARAWAGTPYRHQASLKGVGCDCLGLLRGVWRAVLGPEPEAPPPYAASWAESASGDDPLLSAAQRHLVPITEPLAAYRPRAGDVLLFAFRSHLPAKHCAIATGPAAMIHAHDGAAVTEVALTPWWRRHLAHAFCFPEPS
complement(1504133..1505026)       PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E8E01_RS07230; phage(gi100017)     3.61e-57            MethylorubrumpopuliMRTIPPALGARLEGSATTLCRCWALRRRDGFVLGFTDHDRDLSLGGVTYAARSGLEAAEASAELGFAVGGGEVAGALTSAGITEADVAAGLYDGAGVETWLVDWAEPEARLLLDVATLGEIRRAGSAFVAELRGLMHRLDVTVGRSFRAACDADLGDARCRVSLADPRFRTTGTVRALPEPGRLTVALAGPFAAGWFSGGRLTWDGGANAGGSADLRGHRREAETVILDLWDPPQRPAASGDAFTLTAGCDKSLAACRDRFANTVNFQGFPHMPGNDFVLRAGPDAGARLDGSSLFR
complement(1505037..1505678)       PHAGE_Rhodob_RcCronus_NC_042049: hypothetical protein; E8E01_RS07235; phage(gi100015)     1.20e-53            MethylorubrumpopuliMPTDFHEVRFPLDVALRGSGGPVRRTEIVTLASGREHRNSRWADSRRRYDAGLGIRTLDALHAVLSFFEERRGRLYGFRYRDRVDHRSGPPSRPPAPTDQRIGTGDGATRLFALAKTYGSGPDAYRRAIAKPVAGSVRVALNGTEVPAQKFTIDPATGLLTFATDAVPPPGAAVTAGFEFDVPVRFDTDELTVDLAAFTAGEVPRIPLIEIVP
complement(1505690..1506316)       PHAGE_Vibrio_SSP002_NC_041910: sliding clamp DNA polymerase; E8E01_RS07240; phage(gi100042)     1.52e-12            MethylorubrumpopuliMTESDRSTAERARQLETLDKLAQRFGQSLSSAFDRNLNAGRQLDGLLGSLASKLSNVAVKAALAPVKAGVKSLVDSLLSAASEAGGTTALAKGGLVSDGRIVPFRLGGVLGGGQVRPFAAGGVVAAPTYFPLAGSNGGTGLMGEAGPEAILPLRRGSDGRLGVAAGGAERPVAVTVNIATPDIEGFRRSEAQIAARLARAVARGRRAL
complement(1506303..1506545)       phage tail assembly chaperone; E8E01_RS07245                                         N/A                 MethylorubrumpopuliMILTGSPAPETSVSAFPWDAVLGLGLATLRWRPRDLWAATPRELAAAAGLTRPVPDAPSRADLDRLLAAHPDPEARDDRE
complement(1506542..1506868)       gene transfer agent family protein; E8E01_RS07250                                    N/A                 MethylorubrumpopuliMANRRRGEVPLTLGSERYTLCLTLGALAELEDALRAGDLAGLAERFARGRLAARDVIALLGAALRGGGHALDDEAVARLPLDGGLAAVTAALGEALVAAFGAAPPADP
complement(1506871..1507281)       PHAGE_Rhodob_RcapNL_NC_020489: gene transfer aget (GTA) orfg9-like phage major tail protein; E8E01_RS07255; phage(gi461474972)     5.65e-28            MethylorubrumpopuliMSAQKGRDLLVRVSNGAGGFVAVAGLRARQLAFNAETVDVTNADSAGRWRELLAGAGVRRAAIAGSGVFRDEASDARLRQMFFDGVIGLFQIVVPDFGTIEGLFQITSLEYRGEHAGEVTFDIALDSAGPLSFAGA
complement(1507312..1507731)       PHAGE_Rhizob_16_3_NC_011103: p012; E8E01_RS07260; phage(gi195546543)                 3.92e-07            MethylorubrumpopuliMTASSPLLALRAALLTHLAGDAALVALMGGRLRLYDEPPRGVAPVYALFGPSEVSDDSVDGARRHRHAFALTVFAKPGSARSALEAAERIAGSLDAADLSPSGHTLVLLRLKSLTSLRDERTGEARATLSFEAVTEVTA
complement(1507728..1508066)       head-tail adaptor protein; E8E01_RS07265                                             N/A                 MethylorubrumpopuliMTRRPLGARRRRLVLELPVDEPDGFGGRLRRYVAGPVLWGSLEALGAAAPRGGRSDRPGLYRVGLRYRPGVTPAMRLADGARRFAIRAADDPDGRRRDLVCEVEEVIEEATP
complement(1508089..1508664)       hypothetical protein; E8E01_RS07270                                                  N/A                 MethylorubrumpopuliMIPIRVEETGVEPVSVAEMRAYLRLASDETAEDALIARLIPAARAAVEAQARRLLRPARFRVVLAAWPRLGLLPLPLSPLVAVLRAGLVDASGTLTEIDPGPVRIGPDPWEAPCLSFGPDLPPLGAASALIEVGAGCGGDGPPIPEPLVQALRLTVADWFENRGDADGAGPPRALPPEAAGLAAACRRMRL
1508698..1509444                   trypsin-like serine protease; E8E01_RS07275                                          N/A                 MethylorubrumpopuliMRAPNPPAARHAFRAAALAILLGTAPAQAIVGGREGAGIPGAASAVMVLTSGGGVCSGVVVAPDAVLTAGHCVAGVGENRVHYRDAAGRPVLAEVAARLLHPAYDGDAIGGRTRSIDLALLRTRDPLPARFAPAPLSAAMPRAGQSLTLAGYGAARGNDRRSIGRYRGAALSVVEPYGPSRILVWLKAPGAGGCQGDSGGPILDGEAVVALAAWVKDACGGLTQGILLGPQRDWIDRTLSGWGVTARW
1509592..1510440                   trypsin-like serine protease; E8E01_RS07280                                          N/A                 MethylorubrumpopuliMVASPLRACLFGALLGLVPLSAQAVVEGRTSRDPGGLRASVVRIESTQGEICSGTLIAQDIVLTAAHCVMHKAGYNVVVVDPNFRQRRLRAVAVSMHPEFVPGTTPEEQPGIDLALIKLEQPVGAGFRPLDPRGGAITTGDNVDIAGFGVLAENRRNTARTLRTAHLVSIGSLQVANRVTVVTDARRMAETAGAGACLGDSGGPILRGGQMVGVVSWSSGAMRQDRRARTACGGFTAVTPTGEHASWIASRAAEMEAMPADMAAAQAGRTEWMARPGRRRSY
complement(1510510..1511775)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; E8E01_RS07285; phage(gi100008)     1.32e-98            MethylorubrumpopuliMTEMRFETKAPAGLPENKAAMFGTESVLDEFARAFEAFKEANDTRLAEIETRLTADVVTEEKLARIDAALDQAKTRLDRISLDRARPPLGGAEPPRDASATEHKAAFDLYVRAGESAGLKRLEEKALSAGSGPDGGYLVPPTIEREVLRRLAEISPIRAIATVRTVSGGQYKRAVTVNGPAAGWVAETAPRPQTDAPSLSELSFPAMELYAMPAATQTLLDDAVLDIDAWLAEEVETAFAEQESVAFVTGNGIGRPKGFLSYDTVANASWAAGRLGFITTGASGAFAASNPSDVLFDLIYALRAGYRQGASFVMNRRVQSAIRKFKDADGNYLWQPPLAADRAATLMGFPLVEAEAMPDIGAGSHSIAFGDFKRGYLVVDRVGLRTLRDPYSAKPYVLFYTTKRVGGGVQDFAAIKLLRFA
complement(1511809..1512276)       PHAGE_Paraco_Shpa_NC_041868: DNA topoisomerase II large subunit; E8E01_RS07290; phage(gi100005)     2.75e-35            MethylorubrumpopuliMDGHFTGYASLFGVPDLGRDTVAPGAFAASLARRGAGGVRMLWQHDPAEPIGSWLSLKEDGRGLRVAGRLNLAVQRAREIDALMREGALDGLSIGFRVVRAAPERGGRRLLAVDLWEVSLVTFPLQPDARVIRAAAPRPFVPPRLRLAAALAARA
complement(1512335..1513495)       PHAGE_Geobac_GBK2_NC_023612: portal protein; E8E01_RS07295; phage(gi589893765)       1.27e-68            MethylorubrumpopuliMAGFIARLARAAGYVPATKAAAAVALYGEARAVWTARDYGALAREGFQRNAIVHRAVRLVAEAAASLPLTLAGADEAHPLLDLLARPNPREGGMRFLDGVYGHLLVSGNAYIEAVEIDGSPRELFSLRPDRMRVIAGTDGWPVAYDYAVGGRRIRYEQVGAVPPILHLTLFNPLDDHYGLSPMEAAAVPLDIHNAAGAWNKALLDNAARPSGALVFAPSTGAALSDTQFTRLKAELEASYQGSANAGRPLLLDGGLDWRPLSLSPKEMDFVEAKAAAAREIALAFGVPPLLLGLPGDNTHANYAEANRAFYRQTVIPLVRRTADSLARWLEPAFGPARLEPDLDAVEALATERESLWRRVQGADFLSADEKRVAVGYPAQVPGSGA
complement(1513546..1514811)       PHAGE_Dinoro_vB_DshS_R5C_NC_041921: hypothetical protein; E8E01_RS07300; phage(gi100023)     1.25e-92            MethylorubrumpopuliMTRLSTEHLRLLEADWLHRARHDQLPPPGDWTTWAVIGGRGSGKTRTGAEWVRGLAHGDPVFTAEAVGRIALVGETFADVRDVMIEGPSGLLALPRLGGAPPVWQPSRRRVMFNNGAVALAFSAEEPDSLRGPQFGAAWSDEVAKWREAEAAYDMIQFGLRLGAHPRGLVTTTPRPVPLIRRLLADPRTVVTRSRTADNAQNLAPRFLEEVVGRYAGTRIGRQELDGELIEDRPDALWTRDGIERARIHAAPPLQRIAVAVDPPASSRAGADACGIVAAGIAADGTAYVLADATLERAAPAAWAQGALALYHRLKADVLVAEVNQGGEMVVAVLAEADPSVPVVTVRATRGKLLRAEPVSLLYAQGRVRHVGPLPALEDEMCAFGPGGLPGGGSPDRLDALVWALTHLMLVPNAEPRIRRL

#### region 3 ####
3746493..3746506                   attL                                                                                 N/A                 CCGTCGCGTTCCGC
3760557..3762341                   PROPHAGE_Escher_Sakai: putative integrase; E8E01_RS17795; phage(gi15834496)          9.70e-26            MethylorubrumpopuliMKFLQRRAGCYEFRFPFPDDLAGKSAPQPWPDALTALVNARMGRFKTELIRSLQTNDRPTAERKILIYIAELHRLVDQARQLIQGGPRTSVSADYIAALARDHEIHLLGTDEAIRAKGMGLDMAREDGQGPHDGLGMTVDDLCAYRMLVDELDRYTRQQAAQMRPGESTTSFVNPAVEARGIVLPPDDPAWRQLELAFVRAQRSALAGIRARLDGDDVETPQKQREPTGLALSAALRLWAEAGGAGARKPQPFSVAEAERSARRFIELHGDLPIVAITKTHARAFRDALVRLPKALPARLGQLPLPELLKQDLSKYPRCNAQTVNKTLALLSGVLARAERDGHFETLSAWSNPFQVDFDVAPAECEPYEPFSTAELQRLFASPVFAGSDRPRGGQGEAAYWSPLIALFSGARRTEIAQLKIGDVRQGDGGIWYFDITNEGADQNLKTASSARSVPIHRKLIQLGLLNVVTARARLQPSNAPFWPAFAPPIDPKVKAWTKWFGRYLSVHVVDSRAKTFHSFRHTFKRACREAGLSKEVHNALTGHAGGGVGRRYGRERRADGTLDCGISLGRLRIEIDKIIYQDIAIPQKKYKYI
complement(3762718..3763527)       PROPHAGE_Xantho_33913: IS1480 transposase; E8E01_RS17800; phage(gi21231089)          1.34e-19            MethylorubrumpopuliMSLSRKAYPSDVSDDEWALVAPYLTLVREDAGQRAHPLREVFNGLRYVVKTGAPWRWMPHDLPPWAAVYQQAQRWLQAGCFEQLAEDLRAVLRLAAGRKAEPSAAILDSRTLRATPESGERAGYDGAKRKQGSKLHMAVDTLGHLLALHVTPANADDRAQVERLTKAVQAATDDHVEIAFVDQGYTGEKPATAARRHGIELEVVKLPEAKRGFVLLPKRWVVERSFAWATRFRRLVKDYERYASTLADLHIVAFVCIMLKKAALLAASS
complement(3763597..3764025)       ParB/RepB/Spo0J family partition protein; E8E01_RS17805                              N/A                 MethylorubrumpopuliMVQALIRVVALGQDDADLEPSIPSIPDDGNVDDLTLDTSGHLITAYTTAVYAGCPGCTRLSTWMHDAYWRTLEYLPWQKRAVAVVIDGWHRVSAAKLIGRPELPAVIADREERELRWLATEANIAHGVPSSELRSAMRSAPT
3764351..3765169                   methyltransferase domain-containing protein; E8E01_RS17810                           N/A                 MethylorubrumpopuliMTRALDDYLSTLVDMGSEVLTNSLRLWKNGVQSEQAFWTRWFETQGLEWPADFKERQIDRDVPSWLSTLFPPGRGEVSILDVGSGPLPKIGNKHPNRPVRVLAADPLAHFYNELVSQHLPQGTPIPVIFSFAEDLSCRFEPESFDLINCTNALDHSVAPMWALLEMTLILKKNGKIILSHRRNEATVENYEGFHQWNFDISNENDNLIFWNESNTINVNSILGDYCSIKHLTPKDSEYITSIIVKESYPNFDSLRYHRILRACLLEAMLEIA
complement(3765357..3766158)       PHAGE_Paenib_Tripp_NC_028930: transposase; E8E01_RS17815; phage(gi971756982)         1.73e-08            MethylorubrumpopuliLARPLLPDDLWTEIEPLLALPRPRPKGGRRPIDNRAALTGILFVLRSGLPWEMLTTEMGCGMSCWRRLRDWQAAGVWGTEASGSAGAPTRGRRDRLALGEPGQCLCPGQNGGPATGLNPTDWGQAGHEAPHRHRRPRHAAGPETDGRQPAQPADGADPCDPAAEHGQARSTTPAPRQAARRQGLRCQGASPGVPGARNRPAYRPQRHKQRKARPPSLGRGAHPRVVQPLPPSAHPLRAPRRPLRGFHRPRGKSHHSQPDQTVLLG
3766535..3768463                   glycosyltransferase family 4 protein; E8E01_RS17820                                  N/A                 MethylorubrumpopuliMKKWQIPSSIIKRYIPYSAVKKRLLKQVALLEDSILFDKEYYMEQAKRAGIEIEINRAVWHYVTIGDRLRLKTHRLFDTHYYHDVYRDVEPAGMTALHHFVEHGARENRNPHPAFDCSHVRLQTLSDENPLLSYILSEKGSLNPHRLFDERFVISQIAPDQLNGKTVLEAYFDSSLDVEPSEHFNPAEYYERYPSIKDLHPFYHYVRWGIGEGRLITGRSGSIKNIMAEIEHAALADPDIIPPWQDIDEIGRVQRLATKSLEEELMLRLTDGLDQSKTTFIAVTSYLSAGGAEKVLANICNAMEESEEIEQIIIIKTGRGENNDGRWLGKSNQIVIDLSDIIDSIPGKSAALTFAIFLRMLNLTCVFVVNSPLGWDLIERHGRVLNKICNLSVACFCYDYDDFGRCAGYARTHLPHALPYVDKIVTDNAAFRDVLVQDLSLDKEEARKIVVLYQPIQLHLIDRQLDRVSSRALRNVLWAGRFSKQKRVDLAIEIAKEMPDLHFTLAGGVEGDLGLSAIALPTNITFYGAYERFESLPIQRFDIFLYTAQWDGLPNVLLEAAAVGLPIVAPDIGGIPELISEHTGWLVSENSSAYAFSQTIRTLIGNPQLARDKAMSLAKLLKVRHSRELFAIEAVQKLVKDR
3768465..3769226                   glycosyltransferase family 2 protein; E8E01_RS17825                                  N/A                 MethylorubrumpopuliMDGIEVSFVVNLHREGRLCIASLTSAVNAVQFASRSGIPAELLIVLDNPDDATLSIAERFSRHARLLLINVKDLGEARNHGVSCSRGQYVAFMDGDDLCCRNWLVAAYNETGLFSRSCIVHPQFNLFFGRNYSRYFWVHPDMRKDDIRLSRLLVENLWTSSVFSEKKIFVRVPYIRNDIKNGLGYEDWVFNVETSTSGINHITAPDTILFIRRNKEASLLVESGANAVIPAFNKLFDKSQTSFRNINARLYYP
3769563..3770270                   PHAGE_Caulob_Cr30_NC_025422: hypothetical protein; E8E01_RS17830; phage(gi725949425)     6.92e-11            MethylorubrumpopuliMSDDYGVQFFDDQVDGSLKSARIIAPWLVNLVGPKTVIDVGCGLGTWACAFKESGVERVTGIDGDYVDRSRLLISEADFIPVDLSSPPDASRFGRFELAVSLEVAEHLPAEVAEKFIDLLTGLSDTVFFSSAIPGQGGTHHINEQWQSYWVQLFSSRGFRPLDIIRSRFWDAEVEWWYAQNTFLFARPGVVPQLQVKEDCPIDMVHPHLYSKRMSQLKLAQDEVILLKSKLKAKS
3770544..3770708                   PROPHAGE_Salmon_LT2: transposase; E8E01_RS17835; phage(gi16766077)                   2.63e-05            MethylorubrumpopuliMKRGQKTGTEQVVLKLRQIEVQMAQGKSLAIACREAEISEQSYYRWRKEYGGRQI
3770793..3771109                   IS5 family transposase; E8E01_RS17840                                                N/A                 MethylorubrumpopuliMARLFWLSDEAWARIEPHLPHGQPGNLGSMTGRSAASCTSRSAAAGRTRPPLTAPTRRSTTATIGGLSAGSGSGYSPRSRLQAPFQTSCSTRPTRPIARPLGC
complement(3771366..3771737)       PROPHAGE_Shewan_MR-1: IS110 family transposase; E8E01_RS17845; phage(gi24375433)     1.35e-23            MethylorubrumpopuliGIGALNATALVAAIGDVATFARGRDLAAWLGLVPRQVTTGGKPKLVGITKRGSKYLRKTLIQGARAAMPTLRQGDTRLGQWLRGLLARVHTNTAVVALAAKMARIVWALLRHGCVYEATAVAA
complement(3771987..3773321)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; E8E01_RS17850; phage(gi100146)     2.92e-25            MethylorubrumpopuliMAANTASIVKKFESRTSVIGIIGLGYVGLPLACAALKVGFHVVGFDIDAGKVQSLRSGRSYIDSIDDGIITKYVSSGFLRATENFERLRDVDAIIICVPTPLTKQREPDLSFIESTAVEIAKNLQEGQLVVLESTTWPGTTVEVVKPILEKSGLICGVDFFLAFSPEREDPGNIEFSTSKIPKIVGGDGETALLVANAMYSSFVSETVPVSSTQAAEAVKLTENIFRAVNIALVNELKIVFDAMNIDVWEVIEAAKTKPFGFMPFYPGPGLGGHCIPIDPFYLTWKAREYELSTRFIELAGEINVSMPNYVIDKLSKALDERERRGLNAASILVLGVSYKKNISDIRESPSLKIIETLEKRGSKVDYYDPHVPEITITREHPSLAGKRSIDWNPSSLSNYDAALIVIDHDAYDYGAIVENSSIIIDTRNSCARNGKISDKIIKA
3773784..3774638                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; E8E01_RS17855; phage(gi557307612)     2.23e-28            MethylorubrumpopuliEATTCIVWLFSLVLGHSRHIEARFVLHQDLQTLLRCHMQALTAIGGVPIEILYDRMKTAVTGEDEAGHIVYNRSLLALAQHYGFLPRACRPYRAKTKGKVERPFSYIRQDFFLARFFRDLDDLNRQLRIWLDTVANVRLHGTTQRIVSEAFAAERPELQPLPVLTFDALLKLERRVSHDGLVSIGGNYYSVPDRTRRVVEVHQLPDTIRILDGGRLVASHPILEGRRQYRIDPDHRQGTASRAMRHGHPDSLPIGRRGDHVARRSLAVYQAIGERLAGGIGGQR
3774676..3775184                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; E8E01_RS17860; phage(gi557307613)     6.21e-18            MethylorubrumpopuliIERSLVGLRMPRALEVLDATVRRIEQGEIDGLAALDVILAEELTLRENRRVRTALLVARLTTIKTLSGFDFAFQPSLDRDRILALAELTFIDRAEVVHLLGPPGTGKSHLAIALAVRRSRPDAAWCSRRWPTSPRRPRPSATAPCASASAISAGPRCWSWTTSATCLSTG
complement(3775186..3775320)       helix-turn-helix domain-containing protein; E8E01_RS17865                            N/A                 MethylorubrumpopuliMVLLGELVMILDLHRQGLSVSAIARRTGREPKTIRKYIERGLEPP
complement(3775386..3775847)       transposase; E8E01_RS17870                                                           N/A                 MethylorubrumpopuliMSAQEAQERHVVGGVDTHKDLHVAAVDDRDRVLASASFVATRQGYRQILAWMRSFGALRRVGVESTGSYGAGLLRFLQQAGAEMLEVTSPDTEDRRRRGKNDDFDAQSAAHAAFAGTRTVTPRARDGMVEALRVLNACRKTAVAARRIALQMIH
complement(3776145..3776570)       PHAGE_Entero_BP_4795_NC_004813: putative transposase OrfB; E8E01_RS17875; phage(gi157166063)     9.39e-09            MethylorubrumpopuliMLKQIRTAHAGSGEVYGAPRVHATLAAQGARHGRKRIARLMREAGLVGVSRRRRGVVTTRRARGARPAPDLVDRNFSAEAPNQLWGATSPSCRPPRASSTSPWWSMPGARASWAGRWPPTSGPNSCSTRWRWPSCNADRAT
complement(3776747..3777086)       IS3 family transposase; E8E01_RS17880                                                N/A                 MethylorubrumpopuliRSVVRPAARREDVGHPQVANHVSERRLVRPSAWAIVPALPAPRSAGGAANASEGACRYAGSLLLPAAAYPVAMRGLGRESHAQLPNRPGRGTVDPAQAAQAEAGLAQPAGTAA
complement(3777151..3777435)       PROPHAGE_Escher_CFT073: transposase; E8E01_RS17885; phage(gi26248360)                1.15e-10            MethylorubrumpopuliPPAYGPRQPGRPSKLAPYLDYLRERITAFPDLSAVRLTRELRERGYTGAYTAVKRFAAAIRPPEAKPYEVRFETPAGQQAQVDFARFVVTFTDAP
3777429..3777743                   PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; E8E01_RS17890; phage(gi557307613)     4.12e-24            MethylorubrumpopuliPGGGNLFFQLVNARYERGAMILTSNRGFAEWGEVFGDPVVATALLDRLLHHAVVIQIEGASYRLRQHADLVPEHVCSKALIVPPPAPRRRGRPPGKAPSDHTAS
3777822..3778164                   IS110 family transposase; E8E01_RS17895                                              N/A                 MethylorubrumpopuliQLLLTAGDNPERLRSEAGFAALCGVSPVPASSGKTVRHRLNRGGDRAANSALHIIAIGTLANRRQDQGVHGPPHRGGPLHAGSDPLPEALHRSCVHAHHSAEGDQPDPHRGLA
3778165..3778467                   PROPHAGE_Lactoc_Il1403: transposase of IS904H; E8E01_RS17900; phage(gi15674055)      4.51e-22            MethylorubrumpopuliHTEGVQGSQYTSLAFGGHCREAGVRSSMGSVGDAYDNAMCESFFATLKCELLDRRRFASQAQAHMAVFTFIEGFYNPVRLHSALGYRSPVRYEQEMLADP
3788621..3788634                   attR                                                                                 N/A                 CCGTCGCGTTCCGC

#### region 4 ####
4942073..4942084                   attL                                                                                 N/A                 CGTCCTGGCCGG
complement(4943819..4945210)       PHAGE_Acidia_virus_NC_029316: glycosyltransferase; E8E01_RS23275; phage(gi1002166872)     3.56e-05            MethylorubrumpopuliMQRPMQACLAIDLTRLITRLRHANPTGIDRVDLAYARHVLGGGAEGTRFGLVSTAFGPRVLDRETARGIVESVAAGWVEDVAAEADPVYRALAASLGSGPAVGPAVGLAADHRPPQAGKRRGEGGLDRRRLQAETGLRVLRSGGVERLPEGTIYLHTSHLRLDRPGRFDWLYTRRDVRPVFFVHDLIPISHPEYGRPGEAGRHALRMETVARHAAHVLVNSGDVGARFTDDARRRGLGAKPVTVVPLGVEPVFSDGAGAAALPDLARPTFLVCGTIEPRKNHLLLLNLWRDLAGSMGADTPRLVLIGRRGWEIENVADMLDRCEAIRPHVSEVVGLSTHGLAALMRGATALLMPSFIEGYGLPVVEAAASGLPVVASDIPVHREIGGRFAHFLDPLDGPGWSAAVRALSEPGSGLRAELAGRLAGYEAPSWAAHFERVDAALAALPAAVAPRGRQDLRKPDPV
complement(4945275..4945823)       hypothetical protein; E8E01_RS23280                                                  N/A                 MethylorubrumpopuliMPPSGVVGSWEWDPATGCFILDEGAAELMAGDVRLAGRPLRSERATAGLDAPEARRFLGEVRQAAEQEEDVAFDLWVASPTGPARRVLCRGRIHRDARHQPVCGEGTLIDADDAGAEARTLLELERAAASEAIDEAAELLIAARQAIDASGSRRLRQLVDVLLLEVAREIASRSVETQPHSH
complement(4946026..4946661)       GNAT family N-acetyltransferase; E8E01_RS23285                                       N/A                 MethylorubrumpopuliMIHVVTAENMQDYAGAIDQAFRLRHRVFVEELGWSNLARPDRREIDEFDDEHAVHLLALDESESVIGYSRLLPTTRPYLLPMVLPQLCEGAAPSGPHIVEWGRICVAECARTSGRRLNPTALALMTAIVEWGLPRGITSFVSEMPTSWILRLLQLHLRAIPLGLPHEIEGEEIVAVEAAFDRRSLRQLQNKRGDIRSVLAPPRASVARLAS
complement(4947063..4947794)       PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; E8E01_RS23290; phage(gi100010)     2.59e-05            MethylorubrumpopuliMSRKSLDLTLEILKSLDRAHSREDILRAIMPRLNAMGIEYVISAMIPQKRLPARTQKNFVILENTSGEWNRLYFSKGYMYFDPIVQATLSSTTGFRWSEIDPAGLQDPKARQVMNEAVEFGLGDGFTVPLATLEEERGGLTFAGRQLDISPGQRGMLTLIASYVVGQTLLIDNGPSERRMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSARVKLGCVSRTQAVAEGFRRGLIV
4948106..4948182                   tRNA                                                                                 N/A                 CGGAGTGTAGCGCAGCCCGGTAGCGCACCTGTCTGGGGGACAGGGGGTCGTCGGTTCAAGTCCGGCCACTCCGACCA
complement(4948209..4949285)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; E8E01_RS23300; phage(gi100037)     5.38e-76            MethylorubrumpopuliMRVRLRGINTVRAKLADGTEKVYHYHRATGTKLVGEPGTPEFIRSFQDAVRNTALARSEGTVEWLIRQYRESRAWTELAAKTRESAAYDLKACEERWGSTLLTIVENPRSRPAFLKWHDNLAEKHPKAADAKLGRLARVFAWGVDRGHIRHNPVANFERAYRSDRAEMIWMPEHVAAFEAVASPEIRLAMMLALHTGQRQVDLLTLPWSAWDGTAVTVRSQSKSRRLVYVPATRALKAALDAAPRRATTILVAPRGAAWRKRRFHELWSEAFAESKIAEDLHFHDLRGTAVTMLAEAGCTVPEIATITGHSQAHAQKILDRYLARTRTLAESAIAKLDEHRRNRNLQNALQNGGVAKV
complement(4949275..4949568)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; E8E01_RS23305; phage(gi100038)     4.65e-14            MethylorubrumpopuliMRSASLPGIPNGGASGSKRLPANIAPRCLTRAQAAEYCGCETVEAFDGWVRKGIVPGPITGTHRWDRRAIDRALDRRSGLISDATTSIDEWLAENAG
complement(4949561..4950058)       PHAGE_Strept_phiARI0462_NC_031942: exonuclease A; E8E01_RS23310; phage(gi100018)     3.88e-20            MethylorubrumpopuliMMIRAAGIFARRVHAGQVDKGGAPYTGHLGRVAARARAHADALGLPRQHGEWCEQIGWLHDTIEDTGTTADDLLDAGFDPAVVQAVQLLTRPAGKPYLECVAGIIASGDRLAMIVKLSDNEDNLDPARALPAAPPEHGLRYQRSAEMLHAALAPTPSITARGRDA
complement(4950060..4950485)       PHAGE_Mycoba_Yoshi_NC_042030: recombination endonuclease subunit; E8E01_RS23315; phage(gi100052)     4.03e-19            MethylorubrumpopuliMPSTTAASSAQTSRAEIEKMLKAAKATRVITMDDHLEAIVMFMLASRLIKIVVPIAGNATDQVRRSRWRALLLTIKAKREAIENGIETVEQAFLSHVVLPDGRTMGQWAEPALQVAYERGEMPNDPLRLPAPSNDGGHNGV
4950567..4950809                   hypothetical protein; E8E01_RS23320                                                  N/A                 MethylorubrumpopuliMSTLLDLDTLIANKIADARDQPAGLQDLVACLVAGIGLAVAVSADGSARAANDLCEAASINIFVMAASQAPLVAMARGRA
4950806..4952176                   PHAGE_Gordon_Utz_NC_030921: dihydrofolate reductase; E8E01_RS23325; phage(gi100060)     1.04e-46            MethylorubrumpopuliMTVRILIGDVRERLRTLPDAYFDMVCTSPPYWGLRDYGVAGQIGLERTLGEHLAVMVEVFREVRRVLKPQGTLWLNYGDCYAASPNGRAAADVVGDDRTFRDKPFSTVGPIFDPAYARTLRVGTSNNKGNGSSDHGGRIVAGGFLKPKDLCMIPNRLAIALQDDGWWVRSEIIWHKPNPMPESVYDRPTSAHEKVWLLTKSEDYFYNHEAIREPVTGGAHVRAAARGTDTGVGWGRLDKLDPDQPDRGRNRVKRPGPNSRQNVDRVPQSRKVKVPGGWAVGPGTHGTIHPEGRTSATYVEAPQPRKLAQPGSGTKNNASMDAALAELSLNPLSTRNARNVWTIAPRAYREAHFATFPPALAERCIKAGVPAQACGLCGHALPHPKCEGLCRFTPPVAGRVLDPFGGAGTVGLVADGLGLDATLIELNPEYAAMSARRIGPAAEIVGAPAPLAVAAE
4952182..4953276                   PHAGE_Azospi_Cd_NC_010355: hypothetical protein; E8E01_RS25725; phage(gi168495118)     7.93e-26            MethylorubrumpopuliMSAFPSLPLFTDAFIADTGHLNAQQTGAYLMLLMVAWRTAECRLPDDDDKLARWARLDRRTWNRVKPAVMEFWTLRDGFWTQKRLTQERDIVSKRADAARLNGKHGGRPKSLENNDPDNPTGSDSLTQRKAPNPNPIRSSLRSDHGALSPRDQVVKTPIDPDWQPDARDIDAAITEGVGREAIRREAAQFDTVVARILLGFEQGRGRGAADTALLVAEYVEALEGLPLAVIQAAASRFRDKTTFLRWDPAWRPSPAQFADEARQGLIPLRAKLVHIRQILEAEVYDPPTDEDRAKVAAAAASWLSRGGETEPGRPRPSPEAVAAAREDVLHEHGAKFREVAVGSLAQLAARLDAKAAAHREQVP
4958779..4958790                   attR                                                                                 N/A                 CGTCCTGGCCGG
