gi|00000000|ref|NZ_WXYS01000016.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 41574, gc%: 51.96%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
16455..16871                       PHAGE_Vibrio_VP882_NC_009016: putative exonuclease; SEETMRM13676_RS19660; phage(gi126010887)     6.79e-08            SalmonellaentericasubspentericaserovarTyphimuriumMKPAPGAEPVRMYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLGLQARMKSERGRFAMLAHTWLALGPVFLDTETTGLDAGAQALEIGLVNARGERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
17055..17390                       hypothetical protein; SEETMRM13676_RS19665                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMENMLKTMREHFPVRTVVIEQSLDMFGVKRNEDGTLLFPRHSDKRFPVARIRKRLAAYGWRGERLNKEVARIVAGPDILPERRDYSIIFPYGWEKKQLTREMRRMFLRKTG
17447..18013                       DUF2913 family protein; SEETMRM13676_RS19670                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMTLTEKSGHLAWCALVALALARQDGGVLSPAQENLFLTRWLATALKQRRFSRDVTPDIEWLLKQGRQMGVSAKLASKLNYLWRSCTGELSEQNDLFRLTYALETAKDMHWNYRLLSDREWSGRNAVALSAGVNGIYLSRAKLDVGFNDSGRQINSLTARLTGNVAGVMKLFDRCGWQSLMPPCPTSIR
complement(18045..18986)           PROPHAGE_Escher_MG1655: predicted transposase; SEETMRM13676_RS19675; phage(gi16131287)     2.06e-110           SalmonellaentericasubspentericaserovarTyphimuriumMKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALADKLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGEQRGIEKGRSEGEREATLKIARTMLQNCIDRNTVMKMTGLTEDDLAQIRH
19401..20606                       PHAGE_Escher_RCS47_NC_042128: terminase large subunit; SEETMRM13676_RS19680; phage(gi100070)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVSSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
20606..21580                       PHAGE_Escher_RCS47_NC_042128: portal protein; SEETMRM13676_RS19685; phage(gi100069)     1.02e-110           SalmonellaentericasubspentericaserovarTyphimuriumMSNERRKTIGRQLNTQASMVEMTDTQRSQVFTLKTGRKITFRFVRVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVTNELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESGFNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSDYERPDDEQKSSILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ
complement(21662..22936)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; SEETMRM13676_RS19690; phage(gi431811050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPAAKLT
complement(22936..23358)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; SEETMRM13676_RS19695; phage(gi431811072)     5.58e-26            SalmonellaentericasubspentericaserovarTyphimuriumMLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYPEELQIFGVVTAFIHKTRSTD
23869..24339                       hypothetical protein; SEETMRM13676_RS19700                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSRLPGVTTETVERPVPDSDEWSWNDVADSVFPACITLSRNMTVAAFKQRLSRFPDDALCCGTFWLASDFLALDSSLTEDDIDAAMELAQHCHDANDGFNWSHLQWAIDEVKRGG
24332..24688                       hypothetical protein; SEETMRM13676_RS19705                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDNNSNINDTWLVGLSVDVNGTEMMVHYLVSATDLEHAEAGVLQMGRTWWPSLKREDDRHRWEYETGVVWFNSIILLDDVENSILRGLKFLDAWTVTGSTDAPVLRDEWGNDWRDITR
25070..25750                       PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; SEETMRM13676_RS19710; phage(gi100026)     1.60e-28            SalmonellaentericasubspentericaserovarTyphimuriumMSRLILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDRTDEWLQPACNQMYRVLKKDALLVSFYGWNRVDRFMAAWKSAGFSVVGHLVFTKNYSSKSAYVGYRHECAYVLAKGRPALPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHTNAIVLDPFAGSASTCVAALQAGRRYIGIELMEQYHKAGIERLTAVQRAMQRPAANDVFYPEAA
25750..25971                       PHAGE_Entero_N15_NC_001901: gp50; SEETMRM13676_RS19715; phage(gi9630517)             3.61e-06            SalmonellaentericasubspentericaserovarTyphimuriumMNYSGHEKLRAEVAALANSMCDLRATLKVLEERYHWQRHGLTERLAGQSLRRINTLLDEAYNESLMLNECFKD
26027..26440                       DUF1380 family protein; SEETMRM13676_RS19720                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMYGTRKELNSKLKRMFGNDERFALLIWTKQDVMSLTQAMTEVEADAILREIGRKGMGEHTGDGISDSTVQALYAGLRTEIPTVSVPADLLARVTNIAGRALDTEDAQAWPLVCQEYPGVADAQVDIARLRQLALAA
26512..27276                       membrane protein; SEETMRM13676_RS19725                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRNTLSTLIVRHGDNLLRRSGWPETVGVTQVAPGVVPGWLAVCGVLSAAEILALTTHLCQPLNYGRAQLLTASAQRLAGTPVRLHLYPVQAYPHPATVRECTEIRLPYAQEWLTTDEYADLLAFLKASADRVCEIVRQDTKRIAAALAPSGESRLMEKRIGNWRLLADEYDHDNWLDEEDEDGLDKVLDAVLVRNARFCPVLLTLVNEPEEEIEAAGVITDCLRFPGEPNRRWLDRRVLRDVVNEARSFTGNIR
27772..28206                       PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; SEETMRM13676_RS19735; phage(gi162135127)     2.72e-17            SalmonellaentericasubspentericaserovarTyphimuriumMQYSNQQRARVINVEESDRLSFLPYMFGNDFMLAELQLYALAKKWMPEYNGGFWHFIRLPEGGGYMMPDCDRVHMINGENWFDRTVSADAAGIILTSLAINRRCWTHHDCGNAALTRLYMLRDTQLWNHITFHPECNAIYAALD
28273..28707                       DUF1380 family protein; SEETMRM13676_RS19740                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREMGAEFNPTADDIQAVLRAIGESDSDALWRDGIGQNFVEGVLRELVALRPPRQIAVPEDVLRTLLPLMEAGMNLPRYQTQDRAAEEETALDTLRYLLSTNIPAHNLTEGNY
28943..29266                       PHAGE_Escher_HK639_NC_016158: DNA pol III theta; SEETMRM13676_RS19745; phage(gi356870660)     4.70e-22            SalmonellaentericasubspentericaserovarTyphimuriumMSGLNLAATTKEEQDKVAIDLVASGVVYKERLAMPVVAELVVREQPEHLREYFRARLEYLRNSRTRMPRNMPEKRMRLKNSAIPDAFCLSLAGFYACRVMFFSGRGV
