gi|00000000|ref|NZ_WXYS01000030.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 16953, gc%: 50.96%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4550..4561                         attL                                                                                 N/A                 CCGGCAGTGAAA
complement(8161..8622)             PHAGE_Sphing_Lacusarx_NC_041927: hypothetical protein; SEETMRM13676_RS23180; phage(gi100136)     6.15e-07            SalmonellaentericasubspentericaserovarTyphimuriumMFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITAQPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATDPHDNDIDCCRWVSADEILNAPNLRSPLVAESVRSYQTGQRYPLSIVGEFNWPFTEGVK
complement(8634..8963)             PHAGE_Klebsi_Marfa_NC_048798: tail fiber protein; SEETMRM13676_RS23185; phage(gi100052)     1.01e-05            SalmonellaentericasubspentericaserovarTyphimuriumMKRLLIAFALLTPLSVNAASFDCQKAQAADEKAICAHLTLNDKDVEMHTKYQFLKGLFAMGSRGALQDAQQSWLKQRQQCKADVTCLTKAYNERLKQLDVIYDHIDKPL
complement(8960..9625)             23S rRNA pseudouridine(2457) synthase RluE; SEETMRM13676_RS23190                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPGKRTGKIYYVQVEGIPDNAALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWREIAQEKDR
9797..11047                        NADP-dependent isocitrate dehydrogenase; SEETMRM13676_RS23195                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMESKVVVPVEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMQWFEAADLIVKGMEGAIAAKTVTYDFERLMDGAKLLKCSEFGDAIIENM
complement(11160..12302)           PHAGE_Entero_HK022_NC_002166: integrase; SEETMRM13676_RS23200; phage(gi9634144)      3.42e-75            SalmonellaentericasubspentericaserovarTyphimuriumMAARPRSHKISIPNLYCKLDKRTGKIYWQYKHPVSGRFHSLGTDEVEAKKVASEANTIIAEQRTRQVLSVNDRLARMKGRRTDITVTEWIDKYIEIQDERLKHRELRPNSYRQKAKPVRLFREHCGMQYLKDISALDISEITDAVKAEGHNRMAQVVRMVLIDVFKEAQHNGHVPPGYNPALATKQPRNRVTRQRLSLEEWKTIYEAAEKQEPYLQCGMLLAIITGQRLGDICNMKFKDIWDDMLHVEQEKTGSRLAIPLDLKCEALGLTLRDVVSKCRDAVISKYLVHFRHTTSQANRGDQVSTSSLTSTFKKARDRSGLKWDKGSPPTFHEQRSLSERLYREQGVDTQKLLGHKSRKMTDKYNDDRGKDWVIVNTKTG
complement(12292..12528)           excisionase; SEETMRM13676_RS23205                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSRMIPLLDWANEEFGAQAPSERILKKYAKGKMMIPPAVKVGRYWMVDRNARFVGTLAEPKIPANASPRLQRIIADGC
complement(12578..13129)           PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; SEETMRM13676_RS23210; phage(gi100006)     8.63e-14            SalmonellaentericasubspentericaserovarTyphimuriumMSNNKLTDRKIAEILARAEICDDSVLTDYTDIAAAMRELQERRRLDGIQHAVCEVCGVPCNNPNHPQMAVAHEYSAQPVPVVPDDGRAEFEAWMLKKWGRERQEYDFAMGKFLHGENYADSYTRHMWKAWTESRVALLQSKYRDLSQPVDHQISEYEKIMGQAGNSPVIPGVYLVDINTDHQH
complement(13126..13458)           PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; SEETMRM13676_RS23215; phage(gi23505476)     6.05e-25            SalmonellaentericasubspentericaserovarTyphimuriumMSNKIVFVNGKSKCGCVMAFSDGGGEYSDVHTIIPCAEHSMPESALTQRDDMRQVREQLEEAEKQVEELTMWIKRLAHSLRNARPNSKLHGAAMNYLSRKGLISVEDVLR
complement(13451..13771)           PHAGE_Erwini_vB_EhrS_59_NC_048198: hypothetical protein; SEETMRM13676_RS23220; phage(gi100038)     5.05e-41            SalmonellaentericasubspentericaserovarTyphimuriumMNKITALPVERDNYGYWTHPLYEQFCDGREVISPDELNAWLEANGLEWKVSYLDDEEIDPDVDGCDISTWQPDPPAGNGWFVGSIHDTEDGAVCIWLRNVQDGHYE
complement(13807..14637)           PHAGE_Salmon_epsilon15_NC_004775: RecT; SEETMRM13676_RS23225; phage(gi30387413)      4.20e-106           SalmonellaentericasubspentericaserovarTyphimuriumMPKQPPIAKADLQKTQGARTPTAVKNNNDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGDCDTMSFVSAIVQCSQLGLEPGGALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARIVREGDDFSFEFGLEEKLVHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRAQSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKETLTIDPADASVITGEYSVVENAGVEENVTA
complement(14630..16953)           PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; SEETMRM13676_RS23230; phage(gi327198600)     3.50e-95            SalmonellaentericasubspentericaserovarTyphimuriumESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDTDQKKEIACLEMDTQNTTAQNLILAAENVEPFKKAIEHDIHKAVNAYKQVFPVDGKVPELCTTIKFFKEWFSAEHINRGLLVKEWAERLKNKPVPVKKTGQHKVIVDDVNKPERPRRSEKPTHRTINYELACGFCEELVLNNLRPAMDFAKRIIAEDREDWKRMSMTVGTIPDIKGYDRQTIIDLVRKAPKAVHNGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIESGRFQCDEEKPQPTDELADEPATPETVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEGISDPNDPKWVHNNYSASNQGEKEEVVPEEKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGKTPKESNQQETAGDAVQEITADGGSGTGGDEAGEAADSIENGNITVPDDIQPGIYYDIPNEAYHAGPGVSKSQLDDIADTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGRTVLTAEEGRKIELMYQSVMVLPLGQWLVESAGYAESSVYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFRTAYYDYRYHVQDAFYSDGYRAQFGERPTFVFLVASTTAECGRYPVEIFMMGEDAKLAGQREYRRNLQTLAECLNNDEWPAIKTLSLPRWAKENANA
15269..15280                       attR                                                                                 N/A                 CCGGCAGTGAAA
