gi|00000000|ref|NZ_WXYS01000033.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 10572, gc%: 47.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1..296)                 PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23415; phage(gi169257273)     1.29e-50            SalmonellaentericasubspentericaserovarTyphimuriumMKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTI
complement(318..476)               PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23420; phage(gi169257274)     2.60e-31            SalmonellaentericasubspentericaserovarTyphimuriumMLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
complement(469..729)               PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23425; phage(gi169257275)     8.25e-20            SalmonellaentericasubspentericaserovarTyphimuriumMLQNRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
complement(779..1189)              PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; SEETMRM13676_RS23430; phage(gi169257276)     5.20e-96            SalmonellaentericasubspentericaserovarTyphimuriumMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1309..1548                         PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; SEETMRM13676_RS23435; phage(gi169257277)     2.12e-53            SalmonellaentericasubspentericaserovarTyphimuriumMDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
1514..1888                         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; SEETMRM13676_RS23440; phage(gi169257278)     6.23e-72            SalmonellaentericasubspentericaserovarTyphimuriumMAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1973..2956                         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; SEETMRM13676_RS23445; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
2959..3708                         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; SEETMRM13676_RS23450; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGTRVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
3719..4066                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23455; phage(gi169257281)     1.01e-79            SalmonellaentericasubspentericaserovarTyphimuriumMARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
4063..4374                         PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SEETMRM13676_RS23460; phage(gi169257282)     7.84e-70            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
4452..4742                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23465; phage(gi169257283)     3.55e-59            SalmonellaentericasubspentericaserovarTyphimuriumMNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
5034..5267                         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; SEETMRM13676_RS23470; phage(gi169257284)     6.75e-51            SalmonellaentericasubspentericaserovarTyphimuriumMRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
5379..5600                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; SEETMRM13676_RS23475; phage(gi169257285)     4.63e-46            SalmonellaentericasubspentericaserovarTyphimuriumMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
5683..6285                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23480; phage(gi169257286)     3.55e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
6494..7105                         PHAGE_Phage_Gifsy_2_NC_010393: NinG; SEETMRM13676_RS23485; phage(gi169257288)        2.03e-147           SalmonellaentericasubspentericaserovarTyphimuriumMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
7102..7248                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23490; phage(gi169257289)     1.76e-26            SalmonellaentericasubspentericaserovarTyphimuriumMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
7238..8035                         PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; SEETMRM13676_RS23495; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
8102..8419                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23500; phage(gi169257291)     1.34e-75            SalmonellaentericasubspentericaserovarTyphimuriumMPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
8593..8718                         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23505; phage(gi169257292)     1.23e-22            SalmonellaentericasubspentericaserovarTyphimuriumMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(8854..9303)             PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SEETMRM13676_RS23510; phage(gi169257293)     3.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(9664..10350)            PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; SEETMRM13676_RS23515; phage(gi169257294)     5.84e-170           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
