gi|00000000|ref|NZ_WSUR01000012.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL3127 135731, gc%: 50.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1..487)                 PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10615; phage(gi100020)     3.11e-110           SalmonellaentericasubspentericaserovarTyphiMAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATS
complement(474..833)               PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10620; phage(gi100019)     1.21e-78            SalmonellaentericasubspentericaserovarTyphiMTLYIGMSRNDGQVIADTDHLRQSVRDILLTPQGSRLARREYGSLLSALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELTGQRNNGAPVSLSVTTGADNGSD
complement(830..1408)              PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10625; phage(gi100018)     1.22e-131           SalmonellaentericasubspentericaserovarTyphiMNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
complement(1477..1914)             PHAGE_Escher_500465_1_NC_049342: hypothetical protein; GQ465_RS10630; phage(gi100026)     4.66e-93            SalmonellaentericasubspentericaserovarTyphiMQKVDDWLTALLANLEPAARNRMMRQLAQQLRRTQQQNIRLQRNPDGIGYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTAASADSASVQFDGKVQRIARVHHYGLRDRVSRKGPEVRYAERRLLGVNDEVETITRDTLLRWLAG
complement(1916..2368)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10635; phage(gi100015)     2.80e-99            SalmonellaentericasubspentericaserovarTyphiMRVRSETVNKPQSLRSALNKVVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
complement(2443..2871)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10640; phage(gi100013)     4.96e-93            SalmonellaentericasubspentericaserovarTyphiMMRALAVVLALALAALGWQSWRLNNASHTIETQGAALKSKTQELTKKNSQLIGLSILTETNSREQTRLYAAAEQTTALLRSRQRRIEELKSENEDLRRWADTPLPADIIRLRDRPALAGGAAYREWLSQSDAVPPGKVSAAQ
complement(2868..3245)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10645; phage(gi100012)     5.09e-82            SalmonellaentericasubspentericaserovarTyphiMKKKVMSVFFQLAWAALLVISLLYPRSGAPVLVGASVQVSCFLAWLLAALCAVGWFAGDRARDEVRAALIKFRAHPVKPVRTWAIRLLIVLCLAFSGWVITLVFYLLTLVLYQIARSQLHEPMAA
3085..3100                         attL                                                                                 N/A                 CCGACAGCGCACAGCG
complement(3250..3759)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10650; phage(gi100011)     1.07e-118           SalmonellaentericasubspentericaserovarTyphiMNTSIVKCCLVGAVLAIAATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALEKCVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAREMAWCLKGA
complement(3740..3955)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10655; phage(gi100010)     1.75e-44            SalmonellaentericasubspentericaserovarTyphiMTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAINWYYKHQSFKLLRGGKISRGEYEYFNR
complement(3959..4162)             PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQ465_RS10660; phage(gi100029)     3.44e-44            SalmonellaentericasubspentericaserovarTyphiMKVRAHQYDTVDALCWRHYGRTQGVTEQVLQANPGLAEYGPFLPHGLQVELPDITASTTAQTVQLWD
complement(4162..4626)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10665; phage(gi100008)     9.15e-111           SalmonellaentericasubspentericaserovarTyphiMKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI
complement(4720..5370)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10670; phage(gi100007)     7.66e-152           SalmonellaentericasubspentericaserovarTyphiMSLSPARQHRLRIQAEQAAREGGSVRHASGYDLMLLQLAEDRRRLKGVQSTVKKAEIKVELLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADPLLQTLDLTTDLDMPDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKEKQQLERRLRNDSR
complement(5374..6438)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10675; phage(gi100006)     0.0                 SalmonellaentericasubspentericaserovarTyphiMKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELLSDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE
complement(6455..7288)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10680; phage(gi100005)     0.0                 SalmonellaentericasubspentericaserovarTyphiMTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFSEAVETLIELEEAQDEKPSLFASVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLAENGERLSALESSLQEQQTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC
7431..9197                         PHAGE_Escher_500465_1_NC_049342: hypothetical protein; GQ465_RS10685; phage(gi100014)     0.0                 SalmonellaentericasubspentericaserovarTyphiMNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEQKEGKDFKEIDLLARQSERHARIGKFNDGGNEADLNPKVANRNKGPRRQPEKNVFSDEQIEKLEEVFHASMFDYQRHWFEAGKINRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDIDLTHSNLARGLLCPDGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFIDDLASVFPLSELQACMVDSWEVWTDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVIAPPTVPGGKFRILERHQWRGMDFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYLNVKDFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGEAANTSNIVEIF
9197..10240                        PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQ465_RS10690; phage(gi100017)     0.0                 SalmonellaentericasubspentericaserovarTyphiMSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRDILSSTYIPHRLLSQQAFARFVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEFTQGNIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIPLQERIKELNEWLGDEVIRFAKYTLDDIS
complement(10289..10984)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; GQ465_RS10695; phage(gi100036)     5.16e-07            SalmonellaentericasubspentericaserovarTyphiMSQLRLKWMRLKIRTSPEAVFDFIKNTPYSDAIGAGFTKYETIHNGMTATFNKKSVVLEPIADPFGEVLEFERVVFDQISFSIQTLSNKICLLTFYNPPKTVKPFIDFLSQAEGLNVAYGNLTVDLKAFMRVIRENFGVKVFGISKVKVSNLPVTEKTRACLELNSSGDALHDLKIFVGDSEFKLDKIKAGGFYLDSKISFELTSGASAVVPDEHFSIFNDAISCMEIDKF
complement(11004..12068)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; GQ465_RS10700; phage(gi100035)     2.75e-35            SalmonellaentericasubspentericaserovarTyphiMKNIHSVTDKALYDALNQKQITLNEIQDLFLERGTIICKKTPRKELARNYSRMTHDYYEHQKIATLLGGQTRTEKITCVRIETGIDKKGIIDAAEKLKKEITGQDDYCKIIVDGPRVLINIRYLSTNYGKSDFKQAINKEALIEIEPLDDGYSIRRPDNENLDDYEGLLLGHISAIQNEQADDSNLDLKLNEISLSHNTSADVRTLFFDKLIRTLDGYELLDVTDAYVYHPKPETIEAEDGNTETGVHVSRASLRGEGVLKSDELSDLYDRGFYIWKIKWKVKENLADPDIFELEAQFGDPLNCTNFSYLVKGVRKYKANGQYFSKPQKLSGRETERFNKLIENRAYSIIMEIS
complement(12065..13129)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: holin; GQ465_RS10705; phage(gi100034)     2.59e-57            SalmonellaentericasubspentericaserovarTyphiMAENGPIEDLAKRISEDLLSRFKWQQHGPCDRDFLCDDEAKHKPEGKKQKHTHPVDVVFSYKDPYLNKVIYLNTDLKSYKAGSINASKIESALASLAKTIECARYSPEWSEKYNFSQIDCEVRGLLFVFNHDNQLQHDFYEFFNPPKPAKGRRDKAVNLEKIPLSAGQQIHIIDPFLINYMLAITNDMNDLIAKKEFPDEEYGFYYPQLTFHKVAVTEKYLPATIEVLSSPFMVIKHGAVYKFNRAKGIEEEVYPEGFVVYYNKKGNSDNEFFYLLDILSNYQILDGINKIRIRLAYREKDERILSHFQRGVEKYAHEYGLDEEAKKRLEDLDVKVVSTVKEFFSAEVISWEPK
complement(13139..13357)           PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQ465_RS10710; phage(gi100038)     8.43e-21            SalmonellaentericasubspentericaserovarTyphiMKSHDRLRIVFAQARQNWRAFAYVMQVHENHYTKRAGVAGIRARAQRLTLGPKSLQAKKLTFIFQLELSAKK
complement(13453..13686)           PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQ465_RS10715; phage(gi100012)     6.64e-48            SalmonellaentericasubspentericaserovarTyphiMRIEIMIDKEQKISQATLDALESELYRNLRPLYPKTAIRIRKGSANGVELSGLKLDEDKKRVMEIMQQVWEDDSWLH
complement(13698..13886)           PHAGE_Salmon_SEN8_NC_047753: primase; GQ465_RS10720; phage(gi100047)                 9.66e-37            SalmonellaentericasubspentericaserovarTyphiMQDYILESLKLQRIDFFIKLVAASECSDEEKRLAIQWVSELTDELMAKIRSHEYCRSMDVTS
complement(14054..16341)           PHAGE_Salmon_SEN8_NC_047753: HNH endonuclease; GQ465_RS10725; phage(gi100046)        0.0                 SalmonellaentericasubspentericaserovarTyphiLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFNESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMRLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELGANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTLTVPLLKITNQGVIYPILKPMRRNCRIISTIWARRNGGNLQPGDWNRSGKQYTNRIFRSSNACSLRQNQPEGLKVVHLRLICFCVVAAFRQVPGYGFFTATIDCRKMTNGVSGA
complement(16440..17300)           PHAGE_Klebsi_ST437_OXA245phi4.2_NC_049449: hypothetical protein; GQ465_RS10730; phage(gi100019)     1.85e-169           SalmonellaentericasubspentericaserovarTyphiMSTILKWAGNKTAIMPELIKHLPAGQRLVEPFAGSCAVMMATDYPHYLVADINPDLINLYKKIALDCEAFISRAKNIFAIANREVAYYNIRHEFNHSSEITDFMKAVYFLYLNRHGYRGLCRYNLSGHFNVPYGNYKNPYFPENEIRAFAKKAQRATFICASYDETLAMLRAGDVVYCDPPYDGTFSGYHTASFTGDDQYHLASILERRSSEGHPIIVSNSDTSLTRSLYRNFTRHRIIAKRSMGVAAGDGKSATEIIATKLVRWFGVDLASGPDVSVETEVRAWQ
complement(17297..17881)           PHAGE_Salmon_SEN8_NC_047753: DNA helicase; GQ465_RS10735; phage(gi100044)            7.54e-100           SalmonellaentericasubspentericaserovarTyphiMNTDKMTISQRANQWLDNDYLFIDTETTGLGDDAEIVEICIIDSHGFIMLNTLIKPTKPIPDEAIAIHGITNEMVAFAPAWTDICGAVEELFRRFGFVIYNADFDLRLIRQTYALNERPSEGAPWMLAAHSVCAMKLYAEYRGEPGRFNGYKWHKLVDAAAHEGVVVEGKAHRALADCKMTLGLVRALAKGGAK
complement(17878..18105)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: DNA adenine methyltransferase; GQ465_RS10740; phage(gi100041)     1.29e-48            SalmonellaentericasubspentericaserovarTyphiMADSMDLVQQRVEEERQRHIHTARNKTPGVSRVLCIDCDAPIPPARRRAIPGVQCCVTCQEIAELKGKHYNGGAV
complement(18105..18338)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10745; phage(gi100042)     4.24e-27            SalmonellaentericasubspentericaserovarTyphiMRNIETRITKTGPDDAGLNQMLTDARMEERRGRADVMAARLDSLAARIVSRQLNHTEAAELLRQEAVKIQNEAQEIH
complement(18406..18747)           PHAGE_Salmon_SEN8_NC_047753: DNA adenine methyltransferase; GQ465_RS10750; phage(gi100041)     7.75e-77            SalmonellaentericasubspentericaserovarTyphiMAIEGDAATVPLSAGLRLNGLNHIAELRAKVFGLNIDSELDRFISDMRDQRDINHEQNKRALAAIFFMAKIPAERHSVNVSELTTDEKRELIKAMNHFRTVVSLFPNRLAMPN
complement(18711..18911)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10755; phage(gi100040)     6.38e-41            SalmonellaentericasubspentericaserovarTyphiMLTKEPSFASLLVKQSPAMHCGHGWIMGKDGKRWHPCRSQDALLAELSAKKQGKPWLLKVMLRLFR
complement(18919..19428)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10760; phage(gi100039)     1.56e-117           SalmonellaentericasubspentericaserovarTyphiMFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLPCIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVTGLGASFGLI
complement(19461..19703)           PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQ465_RS10765; phage(gi100003)     3.71e-54            SalmonellaentericasubspentericaserovarTyphiMSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVGQ
19820..20452                       PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: primase; GQ465_RS10770; phage(gi100047)     2.22e-95            SalmonellaentericasubspentericaserovarTyphiMSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
20456..21481                       PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQ465_RS10775; phage(gi100036)     0.0                 SalmonellaentericasubspentericaserovarTyphiMSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKPWLGEKEDRRHLSEVIEQWHSLYGQTLADPKRLLAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWPAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKICLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQELYDELPKNRGKLFTPCRKSFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
complement(21597..21941)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; GQ465_RS10780; phage(gi431811072)     6.56e-26            SalmonellaentericasubspentericaserovarTyphiMLHFIPIASIPEALTIPLFTERCAAGFPSPATDYTEEELDLNAYCIRRPSSTFFVRAIGDSMRDMGLHSGDLMVVDKAEKPLQGDIVIAETEGEFTVKRLQLKPRIALLPMNPAY
26088..26103                       attR                                                                                 N/A                 CCGACAGCGCACAGCG
