gi|00000000|ref|NZ_WSUR01000016.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL3127 120551, gc%: 50.54%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
48881..48892                       attL                                                                                 N/A                 AATTTTTAAAAT
60963..60976                       attL                                                                                 N/A                 GAGTCCGGCCTTCG
61146..62411                       PHAGE_Entero_P4_NC_001609: integrase; GQ465_RS13560; phage(gi9627511)                0.0                 SalmonellaentericasubspentericaserovarTyphiMKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDIIQYEHITPYEYARVCNIK
complement(62474..63550)           PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; GQ465_RS13565; phage(gi371496162)     1.74e-13            SalmonellaentericasubspentericaserovarTyphiMIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPLPGLESKRFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFDFLDPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKITDFGIATLTQELFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIEASTDIWPLGAMMFKLLTGDYPFGVYLDAAVNVKTKNRMEWPTFMTANPQYQSLSQDLQKIVDKCLSYDSDKRPTAETLVKACETLCYLSEERHVGRVNNLIQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTRNTVCYSTFDGHPWPRAHPVILWKD
complement(63547..64605)           PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; GQ465_RS13570; phage(gi371496162)     2.49e-64            SalmonellaentericasubspentericaserovarTyphiMKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKDGEEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDLNYNPSESHPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKILDFGLARTSGTEAFTHSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLVLDLFGIEKPDELYEHPPAAITNIPELGKILPKDLARTFISCLSHDKYARPAMSSVRDQIAKYLLKDRHRALFVLNGKKYEINAKNKSVTITWGTSGSMEIVYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLINEKSRSFVTFDISRPEVIS
complement(64595..65758)           PHAGE_Plankt_PaV_LD_NC_016564: protein phosphatase; GQ465_RS13575; phage(gi371496161)     9.86e-38            SalmonellaentericasubspentericaserovarTyphiMFTERLARWLARSSAKSGINRPEDLNAVLSTDIGLVRAENQDLIAAIRVNTPSNVGNPFFAMALLDGMGGMQDGKQCATIALSTLFYSLIKFRSDPPESRLLKATLEANSVVYDYAKGHGGSTLSAVIIENGSAPVIVNVGDSRIYSFSLDCGLTAISSDDSLEALGGRGRGLLQFIGMGESIKPHINILDKNHKNIILTSDGTHFISHSAFEELLSHSSDFSTSAQRIAQYVQWCGAKDNASFGIINCNDIENSLNSHKDIGVELWDPHGNLHIMWMKNYPAAQNYFSQNIVDDQDKEPSPIIDDDGFENKKTLNNPSTKNLELDSETPQRELFSNESPEKSQDPSITSKAIKQRKNKDKKKAIEKIKKDQSVMINIKDEENKNED
complement(66034..66540)           PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; GQ465_RS13580; phage(gi9627520)     6.42e-69            SalmonellaentericasubspentericaserovarTyphiMKRKAELADLEREYREQLLAGDEQIPRRMQDLRDNIDVKKWEINQAAGRYIRSHEEVQHISIRNRLHDFMQQHGAELAATLAPELMGYHEQIPAVKQSAMQHSVDYLREALSVWLAAGEKINYSVQDNDMLTTIGFRPDAASRDDNREKFTPAQNLIYTRRRAELATR
complement(66616..66855)           PHAGE_Klebsi_ST147_VIM1phi7.1_NC_049451: hypothetical protein; GQ465_RS13585; phage(gi100036)     1.10e-19            SalmonellaentericasubspentericaserovarTyphiMFHCPFCKKTAHVRTSRYLSENVKQRYHQCTNIECSATFRTIESVDGVIRAAPEKPDPAPVTPPPPRKVQGCYSSPFRH
complement(66859..67602)           PHAGE_Entero_P4_NC_001609: head size determination protein sid; GQ465_RS13590; phage(gi9627518)     6.31e-20            SalmonellaentericasubspentericaserovarTyphiMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDMEQEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
68142..68401                       PHAGE_Entero_P4_NC_001609: transcriptional regulator; GQ465_RS13600; phage(gi9627517)     2.96e-36            SalmonellaentericasubspentericaserovarTyphiMHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIATGVMTHGA
68398..68949                       PHAGE_Entero_P4_NC_001609: putative CI repressor; GQ465_RS13605; phage(gi9627516)     1.80e-47            SalmonellaentericasubspentericaserovarTyphiMMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
68946..69173                       hypothetical protein; GQ465_RS13610                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
69170..69490                       PHAGE_Entero_P4_NC_001609: hypothetical protein; GQ465_RS13615; phage(gi9627513)     1.56e-66            SalmonellaentericasubspentericaserovarTyphiMKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
69505..71837                       PHAGE_Entero_P4_NC_001609: DNA primase; GQ465_RS13620; phage(gi9627512)              3.64e-90            SalmonellaentericasubspentericaserovarTyphiMKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVDAVTGNLPPVALEVIAAAEAETEADRKAAAALAVKLMEKTRPASGNAYLTRKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGACHTIEGKNRRENACGLRRAMRPRSPYITPGKPSWWRCPPTYFLWRALPVRNTRPVRLSSPPTVTLTATARVKPLRPQTPARALSPCRRCSVTGMMRLCRKVKRPRGKPFMTPSGLRLTALSLPAKRNLPPAPVKRQCGCMNITAKRWPWMRTASSCPDMRQEYGKSFPRRILPATWPGCFSVCAPRSRRGKLPQWWRPNLFRSRTHRRAVLVFVTGYSIPPPALSARTTNRTGCARYVMLISPHRWRAKRWKPTPLISGAGLTALPVANRKNAMFWPRCLWFWRTVTTGSSFSKSPAPAGAEKVFWPKLRPCLPGKITPRRPPSKRWNHPANALRLASLYDCLTRKNGAVTGQDSRPSPAGMRSPLTRNTRMRTPPIFQRFWPTITRCALPTAAVVYRAAGLFTSRSRLPRRNATRSSGIKLRASWPSLCVSLCRSSATRQRAHCSSHSRTPTRHSVSSAMLTRRLIFAAIWKCSRRPTGCLWVMPVLSRVITVNIFITRIWPIWRLTGTGTCSAKCSGWGCPCKNTAIMRSGTQSRGYKPICRKRKATATGCRNARNPQQHAA
72366..72379                       attR                                                                                 N/A                 GAGTCCGGCCTTCG
72574..72714                       PROPHAGE_Escher_CFT073: putative prophage integrase; GQ465_RS13625; phage(gi26250313)     9.12e-19            SalmonellaentericasubspentericaserovarTyphiMALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWQLQYRFGGK
complement(72750..73899)           PROPHAGE_Escher_MG1655: IS3 transposase B; GQ465_RS13630; phage(gi16128284)          3.79e-18            SalmonellaentericasubspentericaserovarTyphiMTKAASTTKKPCKQHTPEFRDEALKLANALGWLRLPASLTCMNRSSTTGEENSKISSLLLNANRRCPQRSSVSINWQNGMRNLFSRRSRHTSRNANEVCLHRKTSGVQYQSHVPCTSGCPWLVRLASASSSDKPASAVPPCLRRPGGIQRKQRYGAPRLTDELRAQGRVYTVAASLRRQALRAKASRKISPVSYREHGLPVQRICSRTFTSVARIRNGWVTSCIFAPVKAGFIWPWLLTCGRSQPLAGLCPRGRHSLPAMHYTRCGGVNDRKSHHIYRQRQVLFSGLPELTETASAGQDERQRLLLRCLCGKLLPHAEGGMYAWRGLCQPGNNAGSSVLYVRLQSLASPQCLWRSQSGTIKPEPRLA
74169..74180                       attR                                                                                 N/A                 AATTTTTAAAAT
