gi|00000000|ref|NZ_WSUR01000052.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL3127 19020, gc%: 50.47%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1..163                             PHAGE_Salmon_RE_2010_NC_019488: major tail tube protein; GQ465_RS22460; phage(gi418489721)     6.19e-28            SalmonellaentericasubspentericaserovarTyphiKTGRSSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGVDLMEEHRNALGL
218..520                           PHAGE_Salmon_RE_2010_NC_019488: tail protein E; GQ465_RS22465; phage(gi418489722)     7.62e-60            SalmonellaentericasubspentericaserovarTyphiMSDKLTEKTVKLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVGAMMTVIPRISSPTLTAQEMAELDPADLTAMAVEVVTFLLPKSVLADLPTT
532..654                           PHAGE_Salmon_RE_2010_NC_019488: tail protein E'; GQ465_RS22470; phage(gi418489723)     1.06e-19            SalmonellaentericasubspentericaserovarTyphiMVADIATIFHWSPSITDVMPLTDVLEWRHKAIQRSGASDE
647..3427                          PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQ465_RS22475; phage(gi100011)     0.0                 SalmonellaentericasubspentericaserovarTyphiMSDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLTQSVSRTGAELDQARLRAQMMTREMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMAAARAELYRLGLSAGGGARETARIARETERYNRQLAEQERRLREVGERQRKLNAIKAKAEKTRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEKINRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAEFAAKLQDATQTSEKDMMNLMDVIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKTFAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVNDDLKEKGAGIKFNFSDGKGGFGGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQASLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKRHPSLTSALFKMAAGFAVAATAVGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAALGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDTLGPKFKAMWDAVCNATGTAWDWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADVSALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVGGAAAAAVPFAGMYDSGGIIPRGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGVAAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETHAPITIYAQPGQSAQDIAREVARQLDERERKTRAKARSNFSDQGGYE
3427..3912                         PHAGE_Salmon_RE_2010_NC_019488: tail protein; GQ465_RS22480; phage(gi418489725)      5.43e-109           SalmonellaentericasubspentericaserovarTyphiMMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEVTGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTLKRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLLQ
3936..5009                         PHAGE_Salmon_RE_2010_NC_019488: gene D protein; GQ465_RS22485; phage(gi418489726)     0.0                 SalmonellaentericasubspentericaserovarTyphiMNSRSPAFSITIEGKDVTTALDARLMSLTLTDNRGFEADQLDLELDDADGQIVLPRRGAVIQLALGWKGQPLFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGKDLTDKVLDHMDQTNESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTLADRGAYTGVIASWLHTREPKKKETTQVKRRHKKVATPKEPEAKQGDYLVGTDENVLVLNRTYANRGNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVKIDDLEIE
5077..5295                         PHAGE_Salmon_RE_2010_NC_019488: OGR regulator of late gene transcription; GQ465_RS22490; phage(gi418489727)     8.87e-35            SalmonellaentericasubspentericaserovarTyphiMMNCPKCGHSAHTRSSFQVTDSTKERYCQCQNINCGSTFVTHETVVRFIVTPALVNNAPPHPTVSGQGHMNF
complement(5382..5759)             PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQ465_RS22495; phage(gi100007)     9.26e-64            SalmonellaentericasubspentericaserovarTyphiMNKPLIALLLITSFSASADKIPSSIQNLIAVYDTRTHSLEDGGLTIRYNKRLLLVDAAESMFQGICNDYYMNKWKPGTIKRITLLNVTSDQGFEINAGGDECRKAGTMKDEQARTYRTSFIKPLQ
5893..5979                         peptidase; GQ465_RS22500                                                             N/A                 SalmonellaentericasubspentericaserovarTyphiPAYPVLYPEELQIFGVVIAFVHKTRSKD
5979..7253                         PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; GQ465_RS22505; phage(gi431811050)     0.0                 SalmonellaentericasubspentericaserovarTyphiMFALADVNSFYASCEKVFRPDLRNTPVVVLSNNDGCVIARSKEAKQLGIKMGVPWFQLKTTEFPVPVVAFSSNYELYASMSNRVMAHLEELAPRVEQYSIDEMFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFEGVLALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANPTFIRKNFSVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQFCRHVAVFVKTSPFAVNEPYYGNVASEKLTTPTQDTRDIIAAAVKALDRIWVKGHRYAKAGCMLNDFTPTGISQLNLFDEVQPHERSEQLMKVLDSINHSGMGKVWFAGRGIAPEWQMKRELLSPAYTTRWAELPVARLR
7385..7654                         hypothetical protein; GQ465_RS22510                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRINVLLLTSLLVAGPALAGEAHVCKSQTVANSAANAELTDNTVFKCGESISGTIPSLAREGWKIVQQTDQADVTDPSKTYAQLIIQKD
complement(7754..8080)             DUF3085 domain-containing protein; GQ465_RS22515                                     N/A                 SalmonellaentericasubspentericaserovarTyphiMLKFSAKDLKPVLLEARKNHCGVVLVKDHGVYIMSETGELTPRGRKVAYAKGCHPEKDEAWWDTARAEVGGDDFGETINLTKSMINRILNERKPLYITASNEEFKIEC
complement(8155..9009)             hypothetical protein; GQ465_RS22520                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMCLDVTEEDITWQLRGSRSDYVNTRIQFDREKLMAVMDVMLSGLDSDETTLARCRQVLTLWIAGLDMLLKEAEQPDWLPRVHPHSSGQCDLLLKGNPAALTEADEETYLRVTGQQDLPAHRRIPQVIFSKTVRYWHRFESWLAQQLQDITQHCYQKLKCFVANCTTEPRQLREFRGEYGSLRLFVGPQDIDEIDILEFNPEYIVSWVDKVADGLFTPVCFVVNVYYKNGILLESFTWDSEVDNINRMTSSDYGEAMSQAISWVREQFEQPVIDQPVPQQPRLAA
complement(9128..10036)            hypothetical protein; GQ465_RS22525                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMLASFYIQRQLSKALGLSVNAEEVFYQVDDRESDYVNTDMVLNRDRLLSVMQFMLDDVALNPELRERCRQAERILTLWIRGLDALATVSEDMSILPRTITECSGRVDRLLPGDPQALLALPDDAFLRLTAQCHLMSGEQFPREQLAATMPYWTRFMAWIARELYQVEDRCLVQLGRLYRRLHVEPRKIRCFNLAFGRIELHMSGRDIDECQYLYAYDDASLEDYLEEIMAGNLTPVRFEVRVIYRNDSELNVFRRDADVIDVEHPHVSDWQNVVSEALDWLRQERTSLVEIPLTRPALKLAA
complement(10108..12057)           PHAGE_Faecal_FP_Taranis_NC_047914: hypothetical protein; GQ465_RS22530; phage(gi100023)     3.99e-39            SalmonellaentericasubspentericaserovarTyphiMNTSLHPDDISRFISGRLISSLAAGQVPWRGTIPGLPEHALTGVPFTGINVLLLWQAMQQRSLRSGRWLTGDDLRQLGGQVRSGEKPVTLVRYRPSLSLFKVINPEQCDGLPDTLQPGWPLPPRPQPSLNVIRDLLQNSGVPVIHRDNVLPVYRALHDRIELPPVASYVGEETYWQDILNLLVQATGHPQRLHRFGLTVDTRTDEVHEALVAELGAAFLSAALGLPGAMLSRLDVAPWVTYLQGDPWRLFRAAEAARKAMMWLKERRPSMTTVEMWQKMASLILETHYGFSLDDTTLGCRSVVERHIECGITPLMAINALARIYQWERYDQPQRSLFINEAGPDSEILTLSEIRPELLTCYRVPVPSGIPDRKAEAVQVESLPLLLAPAVSEGKSAANDDGPDDPDGNDNVVALPWAARRGKENPHIHRFVSIFNGIAPHESRWQVFSDFVHMAACSLYNAVHRDPDFEADYMRRVSHYSAEDANNMARLLSEVVMGLEFSPTDFLGRIYMISGLGNFHNAQYFTPYSVSYAMARMTLSDRIPELSSGERDFITVSDPASGAGSMVVALAEAMLEAGFNPQKQMVAYCVDIDPVASMMCYIQLSLMGIPAIVATGNSLTVEIKREMATPMFVLGRWHHRWQADRTRKAA
