gi|00000000|ref|NZ_WSUO01000011.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL4653 135353, gc%: 50.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1..488)                 PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07520; phage(gi100020)     3.83e-111           SalmonellaentericasubspentericaserovarTyphiMAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSP
complement(475..834)               PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07525; phage(gi100019)     1.21e-78            SalmonellaentericasubspentericaserovarTyphiMTLYIGMSRNDGQVIADTDHLRQSVRDILLTPQGSRLARREYGSLLSALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELTGQRNNGAPVSLSVTTGADNGSD
complement(831..1409)              PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07530; phage(gi100018)     1.22e-131           SalmonellaentericasubspentericaserovarTyphiMNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVKVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFVLPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
complement(1478..1915)             PHAGE_Escher_500465_1_NC_049342: hypothetical protein; GQS43_RS07535; phage(gi100026)     4.66e-93            SalmonellaentericasubspentericaserovarTyphiMQKVDDWLTALLANLEPAARNRMMRQLAQQLRRTQQQNIRLQRNPDGIGYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTAASADSASVQFDGKVQRIARVHHYGLRDRVSRKGPEVRYAERRLLGVNDEVETITRDTLLRWLAG
complement(1917..2369)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07540; phage(gi100015)     2.80e-99            SalmonellaentericasubspentericaserovarTyphiMRVRSETVNKPQSLRSALNKVVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
complement(2444..2872)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07545; phage(gi100013)     4.96e-93            SalmonellaentericasubspentericaserovarTyphiMMRALAVVLALALAALGWQSWRLNNASHTIETQGAALKSKTQELTKKNSQLIGLSILTETNSREQTRLYAAAEQTTALLRSRQRRIEELKSENEDLRRWADTPLPADIIRLRDRPALAGGAAYREWLSQSDAVPPGKVSAAQ
complement(2869..3246)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07550; phage(gi100012)     5.09e-82            SalmonellaentericasubspentericaserovarTyphiMKKKVMSVFFQLAWAALLVISLLYPRSGAPVLVGASVQVSCFLAWLLAALCAVGWFAGDRARDEVRAALIKFRAHPVKPVRTWAIRLLIVLCLAFSGWVITLVFYLLTLVLYQIARSQLHEPMAA
3086..3101                         attL                                                                                 N/A                 CCGACAGCGCACAGCG
complement(3251..3760)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07555; phage(gi100011)     1.07e-118           SalmonellaentericasubspentericaserovarTyphiMNTSIVKCCLVGAVLAIAATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALEKCVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAREMAWCLKGA
complement(3741..3956)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07560; phage(gi100010)     1.75e-44            SalmonellaentericasubspentericaserovarTyphiMTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAINWYYKHQSFKLLRGGKISRGEYEYFNR
complement(3960..4163)             PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQS43_RS07565; phage(gi100029)     3.44e-44            SalmonellaentericasubspentericaserovarTyphiMKVRAHQYDTVDALCWRHYGRTQGVTEQVLQANPGLAEYGPFLPHGLQVELPDITASTTAQTVQLWD
complement(4163..4627)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07570; phage(gi100008)     9.15e-111           SalmonellaentericasubspentericaserovarTyphiMKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI
complement(4721..5371)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07575; phage(gi100007)     7.66e-152           SalmonellaentericasubspentericaserovarTyphiMSLSPARQHRLRIQAEQAAREGGSVRHASGYDLMLLQLAEDRRRLKGVQSTVKKAEIKVELLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADPLLQTLDLTTDLDMPDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKEKQQLERRLRNDSR
complement(5375..6439)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07580; phage(gi100006)     0.0                 SalmonellaentericasubspentericaserovarTyphiMKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELLSDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE
complement(6456..7289)             PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07585; phage(gi100005)     0.0                 SalmonellaentericasubspentericaserovarTyphiMTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFSEAVETLIELEEAQDEKPSLFASVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLAENGERLSALESSLQEQQTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC
7432..9198                         PHAGE_Escher_500465_1_NC_049342: hypothetical protein; GQS43_RS07590; phage(gi100014)     0.0                 SalmonellaentericasubspentericaserovarTyphiMNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEQKEGKDFKEIDLLARQSERHARIGKFNDGGNEADLNPKVANRNKGPRRQPEKNVFSDEQIEKLEEVFHASMFDYQRHWFEAGKINRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDIDLTHSNLARGLLCPDGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFIDDLASVFPLSELQACMVDSWEVWTDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVIAPPTVPGGKFRILERHQWRGMDFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYLNVKDFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGEAANTSNIVEIF
9198..10241                        PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQS43_RS07595; phage(gi100017)     0.0                 SalmonellaentericasubspentericaserovarTyphiMSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRDILSSTYIPHRLLSQQAFARFVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEFTQGNIFHLMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIPLQERIKELNEWLGDEVIRFAKYTLDDIS
complement(10290..10985)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; GQS43_RS07600; phage(gi100036)     5.16e-07            SalmonellaentericasubspentericaserovarTyphiMSQLRLKWMRLKIRTSPEAVFDFIKNTPYSDAIGAGFTKYETIHNGMTATFNKKSVVLEPIADPFGEVLEFERVVFDQISFSIQTLSNKICLLTFYNPPKTVKPFIDFLSQAEGLNVAYGNLTVDLKAFMRVIRENFGVKVFGISKVKVSNLPVTEKTRACLELNSSGDALHDLKIFVGDSEFKLDKIKAGGFYLDSKISFELTSGASAVVPDEHFSIFNDAISCMEIDKF
complement(11005..12069)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; GQS43_RS07605; phage(gi100035)     2.75e-35            SalmonellaentericasubspentericaserovarTyphiMKNIHSVTDKALYDALNQKQITLNEIQDLFLERGTIICKKTPRKELARNYSRMTHDYYEHQKIATLLGGQTRTEKITCVRIETGIDKKGIIDAAEKLKKEITGQDDYCKIIVDGPRVLINIRYLSTNYGKSDFKQAINKEALIEIEPLDDGYSIRRPDNENLDDYEGLLLGHISAIQNEQADDSNLDLKLNEISLSHNTSADVRTLFFDKLIRTLDGYELLDVTDAYVYHPKPETIEAEDGNTETGVHVSRASLRGEGVLKSDELSDLYDRGFYIWKIKWKVKENLADPDIFELEAQFGDPLNCTNFSYLVKGVRKYKANGQYFSKPQKLSGRETERFNKLIENRAYSIIMEIS
complement(12066..13130)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: holin; GQS43_RS07610; phage(gi100034)     2.59e-57            SalmonellaentericasubspentericaserovarTyphiMAENGPIEDLAKRISEDLLSRFKWQQHGPCDRDFLCDDEAKHKPEGKKQKHTHPVDVVFSYKDPYLNKVIYLNTDLKSYKAGSINASKIESALASLAKTIECARYSPEWSEKYNFSQIDCEVRGLLFVFNHDNQLQHDFYEFFNPPKPAKGRRDKAVNLEKIPLSAGQQIHIIDPFLINYMLAITNDMNDLIAKKEFPDEEYGFYYPQLTFHKVAVTEKYLPATIEVLSSPFMVIKHGAVYKFNRAKGIEEEVYPEGFVVYYNKKGNSDNEFFYLLDILSNYQILDGINKIRIRLAYREKDERILSHFQRGVEKYAHEYGLDEEAKKRLEDLDVKVVSTVKEFFSAEVISWEPK
complement(13140..13358)           PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQS43_RS07615; phage(gi100038)     8.43e-21            SalmonellaentericasubspentericaserovarTyphiMKSHDRLRIVFAQARQNWRAFAYVMQVHENHYTKRAGVAGIRARAQRLTLGPKSLQAKKLTFIFQLELSAKK
complement(13454..13687)           PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQS43_RS07620; phage(gi100012)     6.64e-48            SalmonellaentericasubspentericaserovarTyphiMRIEIMIDKEQKISQATLDALESELYRNLRPLYPKTAIRIRKGSANGVELSGLKLDEDKKRVMEIMQQVWEDDSWLH
complement(13699..13887)           PHAGE_Salmon_SEN8_NC_047753: primase; GQS43_RS07625; phage(gi100047)                 9.66e-37            SalmonellaentericasubspentericaserovarTyphiMQDYILESLKLQRIDFFIKLVAASECSDEEKRLAIQWVSELTDELMAKIRSHEYCRSMDVTS
complement(14055..16342)           PHAGE_Salmon_SEN8_NC_047753: HNH endonuclease; GQS43_RS07630; phage(gi100046)        0.0                 SalmonellaentericasubspentericaserovarTyphiLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFNESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMRLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELGANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTLTVPLLKITNQGVIYPILKPMRRNCRIISTIWARRNGGNLQPGDWNRSGKQYTNRIFRSSNACSLRQNQPEGLKVVHLRLICFCVVAAFRQVPGYGFFTATIDCRKMTNGVSGA
complement(16441..17301)           PHAGE_Klebsi_ST437_OXA245phi4.2_NC_049449: hypothetical protein; GQS43_RS07635; phage(gi100019)     1.85e-169           SalmonellaentericasubspentericaserovarTyphiMSTILKWAGNKTAIMPELIKHLPAGQRLVEPFAGSCAVMMATDYPHYLVADINPDLINLYKKIALDCEAFISRAKNIFAIANREVAYYNIRHEFNHSSEITDFMKAVYFLYLNRHGYRGLCRYNLSGHFNVPYGNYKNPYFPENEIRAFAKKAQRATFICASYDETLAMLRAGDVVYCDPPYDGTFSGYHTASFTGDDQYHLASILERRSSEGHPIIVSNSDTSLTRSLYRNFTRHRIIAKRSMGVAAGDGKSATEIIATKLVRWFGVDLASGPDVSVETEVRAWQ
complement(17298..17882)           PHAGE_Salmon_SEN8_NC_047753: DNA helicase; GQS43_RS07640; phage(gi100044)            7.54e-100           SalmonellaentericasubspentericaserovarTyphiMNTDKMTISQRANQWLDNDYLFIDTETTGLGDDAEIVEICIIDSHGFIMLNTLIKPTKPIPDEAIAIHGITNEMVAFAPAWTDICGAVEELFRRFGFVIYNADFDLRLIRQTYALNERPSEGAPWMLAAHSVCAMKLYAEYRGEPGRFNGYKWHKLVDAAAHEGVVVEGKAHRALADCKMTLGLVRALAKGGAK
complement(17879..18106)           PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: DNA adenine methyltransferase; GQS43_RS07645; phage(gi100041)     1.29e-48            SalmonellaentericasubspentericaserovarTyphiMADSMDLVQQRVEEERQRHIHTARNKTPGVSRVLCIDCDAPIPPARRRAIPGVQCCVTCQEIAELKGKHYNGGAV
complement(18106..18339)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07650; phage(gi100042)     4.24e-27            SalmonellaentericasubspentericaserovarTyphiMRNIETRITKTGPDDAGLNQMLTDARMEERRGRADVMAARLDSLAARIVSRQLNHTEAAELLRQEAVKIQNEAQEIH
complement(18407..18748)           PHAGE_Salmon_SEN8_NC_047753: DNA adenine methyltransferase; GQS43_RS07655; phage(gi100041)     7.75e-77            SalmonellaentericasubspentericaserovarTyphiMAIEGDAATVPLSAGLRLNGLNHIAELRAKVFGLNIDSELDRFISDMRDQRDINHEQNKRALAAIFFMAKIPAERHSVNVSELTTDEKRELIKAMNHFRTVVSLFPNRLAMPN
complement(18712..18912)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07660; phage(gi100040)     6.38e-41            SalmonellaentericasubspentericaserovarTyphiMLTKEPSFASLLVKQSPAMHCGHGWIMGKDGKRWHPCRSQDALLAELSAKKQGKPWLLKVMLRLFR
complement(18920..19429)           PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07665; phage(gi100039)     1.56e-117           SalmonellaentericasubspentericaserovarTyphiMFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLPCIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVTGLGASFGLI
complement(19462..19704)           PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454: hypothetical protein; GQS43_RS07670; phage(gi100003)     3.71e-54            SalmonellaentericasubspentericaserovarTyphiMSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVGQ
19821..20453                       PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: primase; GQS43_RS07675; phage(gi100047)     2.22e-95            SalmonellaentericasubspentericaserovarTyphiMSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
20457..21482                       PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; GQS43_RS07680; phage(gi100036)     0.0                 SalmonellaentericasubspentericaserovarTyphiMSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKPWLGEKEDRRHLSEVIEQWHSLYGQTLADPKRLLAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWPAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKICLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQELYDELPKNRGKLFTPCRKSFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
complement(21598..21942)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; GQS43_RS07685; phage(gi431811072)     6.56e-26            SalmonellaentericasubspentericaserovarTyphiMLHFIPIASIPEALTIPLFTERCAAGFPSPATDYTEEELDLNAYCIRRPSSTFFVRAIGDSMRDMGLHSGDLMVVDKAEKPLQGDIVIAETEGEFTVKRLQLKPRIALLPMNPAY
26089..26104                       attR                                                                                 N/A                 CCGACAGCGCACAGCG
