gi|00000000|ref|NZ_WSUO01000018.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL4653 244739, gc%: 51.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
97491..98483                       PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQS43_RS13870; phage(gi100004)     1.12e-60            SalmonellaentericasubspentericaserovarTyphiMSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
complement(98528..98764)           hypothetical protein; GQS43_RS13875                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR
complement(98775..100202)          UbiD family decarboxylase; GQS43_RS13880                                             N/A                 SalmonellaentericasubspentericaserovarTyphiMAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVAPERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYHSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLANRK
complement(100202..100795)         UbiX family flavin prenyltransferase; GQS43_RS13885                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG
100966..101370                     winged helix-turn-helix transcriptional regulator; GQS43_RS13890                     N/A                 SalmonellaentericasubspentericaserovarTyphiMELRNTAFHLLRQLFQQHTARWQHELPELTKPQYAVMRVIAEHPGIEQVDLTEAAVSTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYLTVQGQTLLAAAIPLGDRVDDEFLGRLSAEEREQFTQLVRKMMT
complement(101389..102153)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS43_RS13895; phage(gi100021)     4.39e-95            SalmonellaentericasubspentericaserovarTyphiMIPTERRQIILDMVAEKGIVSIAELTERMHVSHMTIRRDLQKLEQQGAVIQVSGGVQSSTRVAHEPSHQIKTELATPQKAAIGKLAASLVQPESCIYLDAGTTTLAIARQLVTMNKLTVVTNDFVIADYLMDNSGCTIIHTGGAVCRENRSCVGEAAATLLRGLMIDQAFISASSWSVRGISTPAEDKVTVKRAVASASRQKILVCDATKYGQVATWLALSLAEFNQIVTDDGLPESAIRALAKVDISLLMAKQ
102350..102769                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS43_RS13900; phage(gi100020)     1.46e-44            SalmonellaentericasubspentericaserovarTyphiMTTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGGR
102860..103645                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS43_RS13905; phage(gi100019)     8.53e-75            SalmonellaentericasubspentericaserovarTyphiAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGVSQARSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSEAREAYAEALAQWVFSQDSELAPMISATASTQALAAIQQQYGATEASYAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPWVNALHAPVSLALKSGNFGDESFFIRAQREFQV
103642..104280                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS43_RS13910; phage(gi100018)     3.65e-111           SalmonellaentericasubspentericaserovarTyphiMTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
104285..105061                     HPr family phosphocarrier protein; GQS43_RS13915                                     N/A                 SalmonellaentericasubspentericaserovarTyphiMPRFAADLSMMFTEVPFIERFAAAAEAGFQAVEFLFPYGFAASEIKAQLSRHDLTLALFNTSAGDTAAGEWGRAALPGREHDARADIDLALEYALALECEQVHIMAGVVPDGADGARYRATFIDNLRYAAGRFAAHDKRILIEALSPGVKPGYLFSSQYQALGIAEEVDRPNVFIQLDTFHAQKVDGNLSHLIREYAGRYAHVQIASLPDRHEPDDGEINYPWLFRLFDDVGYCGWIGCEYQPRNTTQEGLGWFNAWR
105101..106051                     PHAGE_Escher_vB_EcoM_Schickermooser_NC_048196: hypothetical protein; GQS43_RS13920; phage(gi100087)     9.61e-07            SalmonellaentericasubspentericaserovarTyphiMQIIITGGGGFLGQKLASALLNSSLAFNELLLVDLKMPARLSDSPRLRCLEADLTQPGVLENVITANTSVVYHLAAIVSSHAEDDFDLGWKVNLDLTRQLLEACRRQPQKIRFVFSSSLAVYGGTLPECVTDTTALTPRSSYGAQKAACELLVNDYTRKGYVDGLALRLPTICVRPGKLNRAASSFVSAIIREPLQGETTICPVSESLRLWISSPATVIHNLSLAATLPAPGEASSINLPGISVTVGEMLETLRQAGGQAARDRVTHQRDEGVEKIVASWPGRIDNQRALALGFVADKRFDDIIERFRQDDMEGRS
106048..107544                     permease; GQS43_RS13925                                                              N/A                 SalmonellaentericasubspentericaserovarTyphiMTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPPTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLSLLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGIILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAAQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIMLWVRWQAQGIKDKLVVKD
complement(107586..108518)         PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: tail assembly protein; GQS43_RS13930; phage(gi100053)     2.23e-30            SalmonellaentericasubspentericaserovarTyphiMTVKELAMLNLQRMSLFVAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARHPVSSLESLAQAEWIIHERLPTPLRWTVTNNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSL

#### region 2 ####
complement(202454..203518)         PHAGE_Bacill_G_NC_023719: gp243; GQS43_RS14430; phage(gi593777699)                   9.62e-08            SalmonellaentericasubspentericaserovarTyphiMADQTNPWDTAQVADTTTQTADAWGTPAGVATDGGSTDWLNSAPAPAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMPAPVAIILFALIAWQVSGVGMGIAALISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLITRPFVK
complement(203511..204712)         PHAGE_Bacill_G_NC_023719: gp245; GQS43_RS14435; phage(gi593777701)                   1.47e-06            SalmonellaentericasubspentericaserovarTyphiMAIKLEVKNLYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKRWTPCVRWGLRITLTPIRMNFPVGCVSVLGLPARWQSTLISYWMKRFPPSIHFVPKCRMSWNYRRNISAPLSLFPTILMRLCVLATGLPLCKMARSYRLVRRMRSIIRQMIMSARSSVAWILVRSLAPKILPVAVRSAFVKRQVLVPVRHNYYRMKTVNMVTSLSVAINSWASCPSTHKRHARRKGLKRRLSTTLSLMRKPHSASCSLTSARRPARCRLSMKNTSMLALFQNVCCYRLIARGVTMAGA
complement(205067..206026)         PHAGE_Erwini_Hena1_NC_048828: primase; GQS43_RS14440; phage(gi100047)                2.15e-166           SalmonellaentericasubspentericaserovarTyphiMKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYVMGKTVETEDEDWNF
complement(206037..208181)         PHAGE_Erwini_Hena1_NC_048828: exonuclease; GQS43_RS14445; phage(gi100048)            0.0                 SalmonellaentericasubspentericaserovarTyphiMATITPERVMQETMDYHALNAMLNLYDKAGHIQFDKDQQAIDAFFAAHVRPHSVKFASQHERLETLVREGYYDDAVLARYDRAFVFRLFEHAHASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFRLAKENAQMALFSPYDIQRRYGKPFGDIAISERYDELIADPHVRKTYINARDFFQTLAEIQFESGYLYIMFEDTVNRANPIAGRINMSNLCSEILQVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNFYFYTITWHAVHTSMRLARERGKTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMWLKLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPAPFMTNENLDMYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKSLYYIRLRQLALESTEIEGCVSCAL
complement(208154..208564)         PHAGE_Erwini_Hena1_NC_048828: recombination protein; GQS43_RS14450; phage(gi100049)     8.10e-36            SalmonellaentericasubspentericaserovarTyphiMSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA
complement(208561..208806)         PHAGE_Arthro_DrManhattan_NC_048093: endolysin; GQS43_RS14455; phage(gi100033)        6.56e-15            SalmonellaentericasubspentericaserovarTyphiMSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDAADTLRAQGFRQLPVVMAGDLSWSGFRPDMINRLPPTPHAANA
