gi|00000000|ref|NZ_WSUO01000029.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL4653 128785, gc%: 52.93%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
10034..10225                       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS43_RS19120; phage(gi100014)     2.42e-28            SalmonellaentericasubspentericaserovarTyphiTSSRCYKLQFRKLLSIYSLWDCFNLWADIGNEKDRPGDYSLSEYPVHQLPTNHLVDGLVAIGS
10241..10384                       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS43_RS19125; phage(gi100014)     3.51e-17            SalmonellaentericasubspentericaserovarTyphiMDGWGSYVSNILMQDCAGSGGLWYTYGKTFTYISVIDTKTLTLTNCL
10757..11203                       PROPHAGE_Escher_CFT073: transposase; GQS43_RS19130; phage(gi26246249)                2.76e-47            SalmonellaentericasubspentericaserovarTyphiMDEKKLTALAAELAKGLKTEADLSQFFHMLTKLTVETALNAELADHLGHEKNAPKTSSNSHNGYSLKTVLYDGGEIVLNMLRGRENTFELLIKEHQTRITRWKVRFIPLCQRHDMTTREIIATFKEMYDADVSPMLILKITAAVKELV
complement(11374..13296)           PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GQS43_RS19135; phage(gi100015)     0.0                 SalmonellaentericasubspentericaserovarTyphiMEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITMIDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNRLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNNNRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
complement(13313..13567)           PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; GQS43_RS19140; phage(gi100002)     2.23e-33            SalmonellaentericasubspentericaserovarTyphiMKISLVVLVFNEEDTIPIFYRTVHEFNELEKYKVEIIFINDGSKDVTESIIKIIAVSDPLVIPFSFTRNFGNDARCTTILLIFF
complement(13536..13925)           PHAGE_Entero_UAB_Phi20_NC_031019: recombination protein; GQS43_RS19145; phage(gi100049)     3.31e-75            SalmonellaentericasubspentericaserovarTyphiMLKLFAKYTSIGVLNTLIHWGVFAFCMYGMHTHQALTNFSDFVIAVSFSFYANARFTFNASTTAILYMMYMGFMGTLSAVVGWMADQCSLPPLVTLITFSAISLVCGFIYSRFIIFRDKNENLSCRPGF
14246..14870                       PROPHAGE_Shewan_MR-1: ISSod4, transposase; GQS43_RS19150; phage(gi24373869)          4.22e-07            SalmonellaentericasubspentericaserovarTyphiMSHPFDFDKALKALQVRPGINGQRWHLNAINQVFNRLYPVCTFPSGSGCGKPKWFRQKAIKAPTGSFELATPRNRNGTFEPLVKKLQTPCTTRSSAISFDCLRWRVIRTSAGRVKIFMPSAFQPPPSVQYRSHPTKTVATEPAGEGLSRRLAGRYSLKPGWPLSEQGGLYRSGTESRRQKRSSGPISVGKRCLLVKT
complement(15018..15092)           tRNA                                                                                 N/A                 GTCCCCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAGTTGCAGGTTCGATTCCTGCAGGGGACACCA
complement(15168..16109)           PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; GQS43_RS19160; phage(gi966197797)     0.0                 SalmonellaentericasubspentericaserovarTyphiMDSLNDDKINRHSSDLEVESEEKQSGKEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAMALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQNPTLSNVGLLMRLWGVVLLGNLIGTGVAAWAFEYMPIFDEETRDAFVKIGMEVMKNSPTEMFANAIISGWIIATMVWMFPAAGGAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLPWSDFFWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKEEARLRGERLERERKKAEKQR

#### region 2 ####
complement(28870..30930)           PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS43_RS19230; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarTyphiMRHQAHIVKIAIPPVRRVTYVKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKHKGFGRKREMLCGVMEQHLMPTLSAPWFYCSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHAWCGVTQLGWDEKSQQKIAQMLSLALPAGLASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFTSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDANWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAASAPVYPGLFMLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK
31030..32244                       PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; GQS43_RS19235; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarTyphiMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
32342..32998                       CPBP family intramembrane metalloprotease; GQS43_RS19240                             N/A                 SalmonellaentericasubspentericaserovarTyphiMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNVFSGPEPWMAELSRQFFLHKFLNTLVMCFLAPVAEEIIFRGFLLNSSIGWGRYSRVSGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVIFGLLFSATE
complement(33065..33583)           YbjP/YqhG family protein; GQS43_RS19245                                              N/A                 SalmonellaentericasubspentericaserovarTyphiMKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFMNDVNTPDDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADKDYEQPIYDAGAITQAEAWSAKVAPEYEKH
complement(33583..33951)           PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; GQS43_RS19250; phage(gi311992945)     2.79e-08            SalmonellaentericasubspentericaserovarTyphiMSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGAEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
complement(34120..34368)           PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; GQS43_RS19255; phage(gi985760910)     1.35e-23            SalmonellaentericasubspentericaserovarTyphiMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDADIAE
34540..34914                       PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; GQS43_RS19260; phage(gi100005)     1.58e-05            SalmonellaentericasubspentericaserovarTyphiMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFLFLFDDTPPR
35094..36272                       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS43_RS19265; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarTyphiMTAVSQKTTTPSADFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMLACGLAGAAWLLAALLPVSAPVKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFSALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSYGYPSVFLAGAISAVVGILVTILSFRRG
complement(36269..37270)           PHAGE_Escher_500465_2_NC_049343: hypothetical protein; GQS43_RS19270; phage(gi100039)     9.21e-129           SalmonellaentericasubspentericaserovarTyphiMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVEREADELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS
