gi|00000000|ref|NZ_WSUK01000029.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL8802 184378, gc%: 51.58%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
40436..40681                       PHAGE_Arthro_DrManhattan_NC_048093: endolysin; GQS49_RS13280; phage(gi100033)        6.70e-15            SalmonellaentericasubspentericaserovarTyphiMSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDAADTLRAQGFRQLPVVMAGDLSWSGFRPDMINRLHPTPHAANA
40678..41088                       PHAGE_Erwini_Hena1_NC_048828: recombination protein; GQS49_RS13285; phage(gi100049)     8.74e-36            SalmonellaentericasubspentericaserovarTyphiMSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQLPRSA
41061..43205                       PHAGE_Erwini_Hena1_NC_048828: exonuclease; GQS49_RS13290; phage(gi100048)            0.0                 SalmonellaentericasubspentericaserovarTyphiMATTTPERVMQETMDYHALNAMLNLYDKAGHIQFDKDQQAIDAFFATHVRPHSVTFASQHERLGTLVREGYYDDAVLARYDRAFVLRLFEHAHASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFRLAKENAQMALFSPYDIQRRYGKPFGDIAISERYDELIADPHVRKTYINARDFFQTLAEIQFESGYPYIMFEDTVNRANPIAGRINMSNLCSEILQVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYTITWHAVHTSMRLARERGKTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMWLKLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPAPFMTNENLDMYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKSLYYIRLRQLALEGTEIEGCVSCAL
43216..44175                       PHAGE_Erwini_Hena1_NC_048828: primase; GQS49_RS13295; phage(gi100047)                7.69e-167           SalmonellaentericasubspentericaserovarTyphiMKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYVMGKTVETEDEDWNF
44530..45732                       PHAGE_Bacill_G_NC_023719: gp245; GQS49_RS13300; phage(gi593777701)                   3.39e-35            SalmonellaentericasubspentericaserovarTyphiMAIKLEVKNLYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQVGLENYAHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRSPVGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGVVSIDSLKAALSQAQGIEAALIDDPLVVDAQTPLSELLSHVGQAPCAVPVVDEEHQYVGIISKRMLLQALDREGGNNG
45725..46789                       PHAGE_Bacill_G_NC_023719: gp243; GQS49_RS13305; phage(gi593777699)                   9.18e-08            SalmonellaentericasubspentericaserovarTyphiMADQTNPWDTAQVADTTTQTADAWGTPAGVATDGGSTDWLNSAPAPAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMPAPVAIILFALIAWQVSGVGMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLITRPFVK

#### region 2 ####
complement(141861..143069)         PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; GQS49_RS13815; phage(gi971757643)     9.44e-05            SalmonellaentericasubspentericaserovarTyphiMTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALAWVSNGYIAGLTLIVPFSAFLSRYLGARRLIIFSLILFSVAAAAAGFADSLHSLVFWRIVQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWRWIFFATLPVAVLTLLLAYRWLNVASTTMASARLLHLPLLTDRLLRFAMIVYLCVPGMFIGISVVGMFYLQNVAQLSPAAAGSLMIPWSIASFVAIMLTGRYFNRLGPRPLIIVGCLLQAAGILLLTNVTPATSHRVLMMIFALMGAGGSLCSSTAQSGAFLTIARRDMPDASALWNLNRQISFFLGATLLTLLLNALQRVMSLEVAYRWTFIAAAGITLLPLIYAVCLNNRQALLCLKKERS
143157..144089                     PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: tail assembly protein; GQS49_RS13820; phage(gi100053)     7.23e-30            SalmonellaentericasubspentericaserovarTyphiMTVKELAMLNLQRMSLFIAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVIIPLLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARNPVSSLESLAQAEWIIHERLPTPLRWTVTSNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSS
complement(144131..145627)         GntP family permease; GQS49_RS13825                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRREEALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPPTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLSLLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGIILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAAQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVVLINLLFGSGGSWLDPLLPIVVLAAIMLWVRWQAQGIKDKLVVKD
complement(145624..146574)         PHAGE_Sulfol_1_NC_048037: hypothetical protein; GQS49_RS13830; phage(gi100065)       1.36e-08            SalmonellaentericasubspentericaserovarTyphiMQIIITGGGGFLGQKLASALLNSSLAFNELLLVDLKMPARLSDSPRLRCLEADLTQPGVLESVITANTSVVYHLAAIVSSHAEDDFDLGWKVNLDLTRQLLEACRRQPQKIRFVFSSSLAVYGGTLPECVTDTTALTPRSSYGAQKAACELLVNDYTRKGYVDGLALRLPTICVRPGKPNRAASSFVSAIIREPLQGETTVCPVSESLRLWISSPATVIHNLSLAATLPAPGEASSINLPGISVTVGEMLETLCQAGGQAARDRVTHQRDEGVEKIVASWPGRIDNQRALALGFVADKRFDDIIERFRQDDMEGRS
complement(146614..147390)         HPr family phosphocarrier protein; GQS49_RS13835                                     N/A                 SalmonellaentericasubspentericaserovarTyphiMPRFAANLSMMFTEAPFIERFAAAAEAGFQAVEFLFPYDFAASEIKAQLSRHNLTLALFNTSAGDTAAGEWGRAALPGREHDARADIDLALEYALALECEQVHIMAGVVPDGADGARYRATFIDNLRYAADRFAAHDKRILIEALSPGVKPGYLFSSQYQALGIAEEVDRPNVFIQLDTFHAQKVDGNLSHLIREYAGRYAHVQIASLPDRHEPDDGEINYPWLFRLFDDVGYRGWIGCEYQPRNTTQDGLGWFNAWR
complement(147395..148033)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS49_RS13840; phage(gi100018)     3.65e-111           SalmonellaentericasubspentericaserovarTyphiMTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
complement(148030..149292)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS49_RS13845; phage(gi100019)     4.02e-166           SalmonellaentericasubspentericaserovarTyphiMLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQVEVLRDAPLVTGGSGLAMGLARQWAKHGVSQARSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPWVNALHAPVSLALKSGNFGDESFFIRAQREFQV
complement(149286..150209)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS49_RS13850; phage(gi100020)     6.88e-143           SalmonellaentericasubspentericaserovarTyphiMTTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGVTPEEPSC
