gi|00000000|ref|NZ_WSUN01000009.1|  Salmonella enterica subsp. enterica serovar Typhi strain PHL4949 244937, gc%: 51.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
97689..98681                       PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; GQS42_RS08620; phage(gi100004)     1.12e-60            SalmonellaentericasubspentericaserovarTyphiMSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
complement(98726..98962)           hypothetical protein; GQS42_RS08625                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMICPRCADAHIELMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDDAPMVPSIPPLLAEDKR
complement(98973..100400)          UbiD family decarboxylase; GQS42_RS08630                                             N/A                 SalmonellaentericasubspentericaserovarTyphiMAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVAPERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYHSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLANRK
complement(100400..100993)         UbiX family flavin prenyltransferase; GQS42_RS08635                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG
101164..101568                     winged helix-turn-helix transcriptional regulator; GQS42_RS08640                     N/A                 SalmonellaentericasubspentericaserovarTyphiMELRNTAFHLLRQLFQQHTARWQHELPELTKPQYAVMRVIAEHPGIEQVDLTEAAVSTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYLTVQGQTLLAAAIPLGDRVDDEFLGRLSAEEREQFTQLVRKMMT
complement(101587..102351)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS42_RS08645; phage(gi100021)     4.39e-95            SalmonellaentericasubspentericaserovarTyphiMIPTERRQIILDMVAEKGIVSIAELTERMHVSHMTIRRDLQKLEQQGAVIQVSGGVQSSTRVAHEPSHQIKTELATPQKAAIGKLAASLVQPESCIYLDAGTTTLAIARQLVTMNKLTVVTNDFVIADYLMDNSGCTIIHTGGAVCRENRSCVGEAAATLLRGLMIDQAFISASSWSVRGISTPAEDKVTVKRAVASASRQKILVCDATKYGQVATWLALSLAEFNQIVTDDGLPESAIRALAKVDISLLMAKQ
102548..102967                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS42_RS08650; phage(gi100020)     1.46e-44            SalmonellaentericasubspentericaserovarTyphiMTTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGGR
103058..103843                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS42_RS08655; phage(gi100019)     8.53e-75            SalmonellaentericasubspentericaserovarTyphiAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGVSQARSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSEAREAYAEALAQWVFSQDSELAPMISATASTQALAAIQQQYGATEASYAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPWVNALHAPVSLALKSGNFGDESFFIRAQREFQV
103840..104478                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; GQS42_RS08660; phage(gi100018)     3.65e-111           SalmonellaentericasubspentericaserovarTyphiMTILAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
104483..105259                     HPr family phosphocarrier protein; GQS42_RS08665                                     N/A                 SalmonellaentericasubspentericaserovarTyphiMPRFAADLSMMFTEVPFIERFAAAAEAGFQAVEFLFPYGFAASEIKAQLSRHDLTLALFNTSAGDTAAGEWGRAALPGREHDARADIDLALEYALALECEQVHIMAGVVPDGADGARYRATFIDNLRYAAGRFAAHDKRILIEALSPGVKPGYLFSSQYQALGIAEEVDRPNVFIQLDTFHAQKVDGNLSHLIREYAGRYAHVQIASLPDRHEPDDGEINYPWLFRLFDDVGYCGWIGCEYQPRNTTQEGLGWFNAWR
105299..106249                     PHAGE_Escher_vB_EcoM_Schickermooser_NC_048196: hypothetical protein; GQS42_RS08670; phage(gi100087)     9.61e-07            SalmonellaentericasubspentericaserovarTyphiMQIIITGGGGFLGQKLASALLNSSLAFNELLLVDLKMPARLSDSPRLRCLEADLTQPGVLENVITANTSVVYHLAAIVSSHAEDDFDLGWKVNLDLTRQLLEACRRQPQKIRFVFSSSLAVYGGTLPECVTDTTALTPRSSYGAQKAACELLVNDYTRKGYVDGLALRLPTICVRPGKLNRAASSFVSAIIREPLQGETTICPVSESLRLWISSPATVIHNLSLAATLPAPGEASSINLPGISVTVGEMLETLRQAGGQAARDRVTHQRDEGVEKIVASWPGRIDNQRALALGFVADKRFDDIIERFRQDDMEGRS
106246..107742                     permease; GQS42_RS08675                                                              N/A                 SalmonellaentericasubspentericaserovarTyphiMTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPPTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLSLLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGIILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAAQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIMLWVRWQAQGIKDKLVVKD
complement(107784..108716)         PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: tail assembly protein; GQS42_RS08680; phage(gi100053)     2.23e-30            SalmonellaentericasubspentericaserovarTyphiMTVKELAMLNLQRMSLFVAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARHPVSSLESLAQAEWIIHERLPTPLRWTVTNNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSL

#### region 2 ####
complement(202652..203716)         PHAGE_Bacill_G_NC_023719: gp243; GQS42_RS09180; phage(gi593777699)                   9.62e-08            SalmonellaentericasubspentericaserovarTyphiMADQTNPWDTAQVADTTTQTADAWGTPAGVATDGGSTDWLNSAPAPAPEHFSLLDPFHKTLIPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMPAPVAIILFALIAWQVSGVGMGIAALISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIVRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLITRPFVK
complement(203709..204910)         PHAGE_Bacill_G_NC_023719: gp245; GQS42_RS09185; phage(gi593777701)                   1.47e-06            SalmonellaentericasubspentericaserovarTyphiMAIKLEVKNLYKIFGEHPQRAFKYIEKGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKRWTPCVRWGLRITLTPIRMNFPVGCVSVLGLPARWQSTLISYWMKRFPPSIHFVPKCRMSWNYRRNISAPLSLFPTILMRLCVLATGLPLCKMARSYRLVRRMRSIIRQMIMSARSSVAWILVRSLAPKILPVAVRSAFVKRQVLVPVRHNYYRMKTVNMVTSLSVAINSWASCPSTHKRHARRKGLKRRLSTTLSLMRKPHSASCSLTSARRPARCRLSMKNTSMLALFQNVCCYRLIARGVTMAGA
complement(205265..206224)         PHAGE_Erwini_Hena1_NC_048828: primase; GQS42_RS09190; phage(gi100047)                2.15e-166           SalmonellaentericasubspentericaserovarTyphiMKLSRISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEALYAETGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGSSYVMGKTVETEDEDWNF
complement(206235..208379)         PHAGE_Erwini_Hena1_NC_048828: exonuclease; GQS42_RS09195; phage(gi100048)            0.0                 SalmonellaentericasubspentericaserovarTyphiMATITPERVMQETMDYHALNAMLNLYDKAGHIQFDKDQQAIDAFFAAHVRPHSVKFASQHERLETLVREGYYDDAVLARYDRAFVFRLFEHAHASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEHFEDRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFRLAKENAQMALFSPYDIQRRYGKPFGDIAISERYDELIADPHVRKTYINARDFFQTLAEIQFESGYLYIMFEDTVNRANPIAGRINMSNLCSEILQVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNFYFYTITWHAVHTSMRLARERGKTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITLPTREMWLKLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRVYYPAPFMTNENLDMYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKSLYYIRLRQLALESTEIEGCVSCAL
complement(208352..208762)         PHAGE_Erwini_Hena1_NC_048828: recombination protein; GQS42_RS09200; phage(gi100049)     8.10e-36            SalmonellaentericasubspentericaserovarTyphiMSALVYFSSSSENTHRFMQRLGLPATRIPLNERERIQVDEPYILVVPSYGGGGMAGAVPRQVIRFLNDEHNRARIRGVIASGNRNFGDAWGCAGDVIAQKCGVPWLYRFELMGTQRDIDNVRKGVNEFWQQSPRSA
complement(208759..209004)         PHAGE_Arthro_DrManhattan_NC_048093: endolysin; GQS42_RS09205; phage(gi100033)        6.56e-15            SalmonellaentericasubspentericaserovarTyphiMSITIYTRNNCVQCHATKRAMESRGFEFEMVNVDLVPDAADTLRAQGFRQLPVVMAGDLSWSGFRPDMINRLPPTPHAANA
