Submission Results
Sequence Name: Not Available
GenBank Accession Number: 1839780293 open_in_new
GenInfo (GI) Number: 0000000000 open_in_new
Download Results: 1839780293.PHASTER.zip
gi|00000000|ref|NZ_JAAQYM010000005.1| Pseudomonas koreensis strain DSM 16610 5_657737_46.9183, whole 657737, gc%: 61.37%
Download summary as .txt file: summary.txt file_download
Total: 1 prophage regions have been identified, of which 0 regions are intact, 1 regions are incomplete, and 0 regions are questionable.
Region | Region Length | Completeness | Score | # Total Proteins | Region Position | Most Common Phage | GC % | Details |
---|---|---|---|---|---|---|---|---|
1 | 10.5Kb | incomplete | 20 | 8 | 190201-200776 info_outline | PHAGE_Entero_phi92_NC_023693(4) | 60.65% | Show info_outline |
>1 190201-200776 CTAGGCTTGCCGGGCAAGACACTCATGCAGCGCAGTTTGCCAGTCAGGCTGACTGACACC CCATTCCCGCTGCAGGCTGCTGCAATCCAGACGCGAATTCAATGGCCGGGCGGCAGGCGT CGGATAGTCACTCGAGGGAATCGGCAGCAGCGTTGCGCAAGGCTTCCCTTGTTCACGCAG CGCGTTGCCGATGGCCTGGGCAAAGCCGAACCAGGATGTTTCACCTTGCGCGGTCAAGTG GTAGGTACCCCAGGCACCCGCTTGCCCATCTTGCCAGCGCTTGATCAGCGCGAGGGTACT GCGGGCGATGCTGCCGGCCCAGGTCGGCGCACCGATCTGGTCAGCGACGACCCGCAGCTC GGGTTTTTCCTGAAGCAGGCGCTGCATGGTCAACAGGAAATTGCGGCCATGGGTCGAATA GACCCAACTGGTGCGCAGGATCAAATGCTGCGCATGAGCGGCAGCGACCGCTTGCTCGCC GGCCAGCTTGCTCTTGCCGTAGACCCCGAGCGGATTGGTCGCGTCGGACTCGACATAAGG CGCGTGCTTGTTGCCATCGAACACATAATCGGTGGAGTAATGGATCAGCGGAACGTCCAG CAGGGCGGCCTCTTCGGCCAGTACGCCGGGGCCGGTCGCGTTGATGGCGAACGCCAGCGC AGGCTCGCTTTGTGCCTGATCAACCGCCGTGTGTGCCGCTGCGTTGATGATCAGGTCGGG CGCGACTTGTCTGACTTGCTGGCGAATTTGCGCGGGTTGCGCGAGGTCGAGGCGGTCGCG CCCCTGCACCACCAAATTGCCGAGACCGTCCAGGCACGTCTGCAACTCTCGCGAGACTTG CCCATTCTGACCGCAGATAAGAATTTTCATGGGAACAGATCGGCCTCTTGCAGGCTTTTG CTGTCCTGATCCTTGGCTGACAGCTGCGGAGCCTCCTTCAGCTGCCAGTCGATGGCTAGC GTCGGATCGTCCCAGCGAATGCTGCGTTCGGCCGATGGCGTGTAGTAGTCGGTGGTCTTG TAAAGAAACTCGGCCACGTCGCTCAGCACGACGAAACCGTGGGCGAAGCCTTCCGGCACC CAGAGCTGACGATGGTTGTCAGCGGACAGGCGCACGGCGACCCACTTGCCGAAATTCGGC GAGCTGCGGCGGATATCCACAGCCACATCCAACACCTCACCCAGCGTTACCCGCACCAGT TTCCCCTGGGTGTTTTCCAACTGATAGTGCAAACCGCGCAAGACGCCCTTGTGCGAGCGC GAGTGGTTGTCCTGGACGAACTGTGCGTCCACGCCGGTTGCTTCGGCAAACGCCCGGGCG TTGAAGCTTTCATAGAAAAAACCGCGTTCGTCACCGTAGACTTTGGGCTCGATGATCACT ACACCCGGCAGGCTGGTTTCGGTCACGTTCATTGGTTGTCTCCGGCAATTGAAAACAGGT ACTGGCCATATCCGGTCTTGCCGAAATACTGGGCGCGTTCGAGCAGGTAATCGCGACTGA TCCAGCCGTTCTGATAAGCGATTTCTTCCAGGCAGGCGACCTTCAGGCCCTGACGGTGTT CGATCGTCTGCACGTACTGCGACGCCTCAAGCAGGCTGTCGTGTGTGCCGGTATCCAGCC AGGCGAATCCACGACCGAAGCGCTCGACCTGCAGATCGCCGCGCTGCAGATAGGCATTGT TGACGTCGGTGATTTCCAGTTCGCCACGGGGAGAGGGTTTGACGGCCTTGGCAATCCTCA CCACGTCGTTATCGTAGAAGTACAACCCGGTGACGGCGTAGCTGGACTTTGGCTTCGCCG GTTTTTCTTCGATGGACAGCGCGCGCCCATCGCTGTCGAAATCGATCACGCCGAAGCGTT CCGGATCCTTGACCCAGTAGCCGAACACGGTCGCGCCAGCCTTTTGTTGGGCTGCCTTCT TCAACTGCTCGCCGAAATACTGGCCGTGGAAAATGTTGTCACCGAGGATCAGGCAGACTG GATCGTTACCGATGAAGTGCTCACCAATCAGAAAGGCTTGCGCGAGGCCGTCCGGGGACG GTTGCTCGGCATAGCTGAACGACACGCCGAACTGGCTGCCGTCGCCCAGCAGATTGCGGT ATTGCGGCAGATCGTGCGGGGTGGATATCACCAGGATGTCCTTGATGCCGGCCAGCATCA GTACCGAGATCGGGTAATAGATCATCGGTTTATCGTAGACCGGCAACAGCTGCTTCGAGA CACCCAGCGTGATCGGATGCAAGCGTGTGCCGGAGCCACCGGCCAGAACTATCCCTTTCA TCATGCTTGCAGCTCCTTGATATCCATGGCGCCCAGGCGTTCGCCCTGATAGCTGCCGTC CTGGACACGGCGACACCAATCGAGATTGTCCAGATACCACTGGACAGTCTTGCGCAGTCC GGTCTCGAATGTTTCTTCCGGCACCCAGCCAAGCTCGCGTTCGATTTTTCCGGCGTCGAT GGCATAACGCAGATCATGGCCGGGACGATCCTTGACGAACGTGATCAGGTCGCGGAAGTG GACGACGCCCTGCGGTTTGTGCGGCGCCAGCTCTTCGAGCAACGTGCAGATGCCGGTGAC CACATCAATATTCTTCTGCTCGTTGTGGCCGCCAATATTGTAGGTTTCGCCGACCACGCC TTCGGTGACCACCTTGAGCAGTGCCCGCGCATGGTCGTCGACGAACAGCCAGTCACGTAC TTGCTGGCCATTGCCGTACACCGGCAGCGGTTTGCCCGCCAGTGCATTGAGGATCATCAG CGGAATCAGTTTTTCCGGGAAGTGATACGGCCCGTAGTTGTTCGAGCAATTGGTCAGCAG GACCGGCAAGCCATAGGTGCGTTGCCAGGCACGAACCAGGTGGTCGGACGCAGCCTTGCT CGCGGAGTAAGGCGAACTTGGGGCGTAGGGCGTGGTTTCGGTGAACAGGTCATCGACGCC ATGCAGGTCGCCATAGACTTCGTCGGTGGAAATATGGTGAAAGCGGAAAGCGCTTTTCTC TGGTTCGGTCAGCCCTTGCCAGTAGGCTCGCGCCGCTTCCAGCAGGCTGTAGGTGCCGAC GATATTGGTCTGGATGAATTCCGACGGACCGTCAATTGAGCGGTCGACATGGGATTCGGC AGCCAGGTGCATGATCGCCTGAGGCTGGAAGCGCTGCAGGATGGCGCTCACCGTTGGGTG GTCGACGATGTCGGCCTGCACGAATTCGTAACGACTGTTGTCAGCGATGCTGGTCAGCGA CTCCAGATTGCCTGCATAGGTCAGTTTGTCGAGGTTCAGAACCTCGTGATCAGTGTTGCG AATCAGATGGCGAACCAGTGCGGAGCCAATGAAACCGGCACCACCGGTGATGAGAATACG CATGCAGGTTGGCCTTTTTCCGTAAGACGATAAAGCGAGTGGAGCATAGCTTGTCGGCAG GTGAGGGACGGTGCAAGAGGGTTGTCCCCGCTATTTTGTCTGCGCTGTGCTTTAGCGGTG GATATTCGACGCACGGGCGTTGCCGATTGCCCATGGCCGAGGGTGCGTCTACAACCCGGG GGTTGATTATCCCACGGGGCAATGGCGATATAGGCGCCTGATAAAACTCCAGGGGTCGTT TCATGTCGCTCGCCACGTTGATTCATCGCGCCAGTTTGCCCAGCCCGCAGGTCTCTGCGC AGCAGGCCCAACAATGGCTGGCCGAGCACTACGGGCTCAGCGGCACGTTGCAGGCGCTAG GCAGTCAGCAGGATCTGAACTTCCGGGTCGACAGTGAGCGCGGGCGATTCGTCTTGAAAA TCTGCCGTGGCGATTATTCGCTGGTTGAATTGCAGGCGCAGCACGCGGGCCTCAAATACC TTGCCGAGCATTCGACTGTTCACGTGCCGCGAGTGATCGCGGCCAATAATGGCGAAGACC TGTTGACGCTGCAGGCCGATGGCGAAGCGGTGCATGTGCGTCTGCTGGACTACATCGAAG GCCAGTCGCTGACCCACCTCGATCACCTCGGCCATCAAGTGGTGGCAGGGTTTGGCCGGC TCTGCGGTGAAATGGACCTGGCGCTGTGCGGTTTCGACCACCCCGGGCTTGAGCGCACCC TGCAATGGGACGCGCGCCACGCCAGTGCGCTGATCAGCCATTTGTTGCCGGTGATTGAGG ATGCGCAACAGCGCGCCTTGATCGCTGACGCCGCCGAACAGGCCGAGCGCCGCTTGCAGC CGCTGCTCGACAAGCTGCCGGTGCAGGCGATCCACATGGACATCACCGACGACAACGTGG TCTGGCAACGGGATGCCCGGCGTCATTGGCAATTGCAAGGCGTGATCGATTTTGGCGACC TGATCCGCACCTGGCGGATCACCGATCTGTCGGTGACCTGCGCCGCGTTGCTGCACCATG CGGCGGGCGATCCGTTTGTCATTCTGCCGGCGGTGCAGGCGTACCACGCGGTCAACCCGC TGCAACACGAAGAACTGCTGGCGCTGTGGCCACTGATCGTCGCGCGCGCGGCGGTGCTGG TGCTCAGTGGCGAACAGCAGGTGAGCATCGATCCCGGTAACACCTACAGCCGCGAGAACC TCACCCACGAGTGGGAAATCTTCCGTGTCGCCACTTCTGTGCCGCTGGCGTTGATGGAGG CGGCCATCCTGACGGCCACCGGTCAGCATCTGCCGAGCATTGGCAGCGAGGGTTTCGCGC CGCTGCTGCCGGGCTTGGTCGGACGTGAGTTTGCCCTGATCGACCTGGGTGTCCTGAGCG TACATTTCGAAGCGGGCAACTGGGAACAGGACGGTATCGATCAGCGGTTATTGAACGAAG CGGCCGCGGTCCATGGGTTGGCGGCTAGTCGATATGGGCAATACCGTTTGTCGCGCACTC GCCCGGACCGCGCCGAGGAGCCTGACACCTTCGCGCTGCATGTGGAATTGCGTGTACCCG GCGGCACCACGGTGGAGGCGCCGTTTGCCGGCGTGCTGCATCAAGCGTCCGATGGCGTGC TGCAACTCGATGGCCCGCAGCTCAGCGTGCGGCTCTGGGGCGTTACGCCTTCGCTGCACA GTGGTGCGGCGCTGGTCAAAGGACAGGTGCTGGGGGCGGTCAGCGGTCCGTTGCGGGTGC AGTTGGTGCGCGGCTCGCAGGTTGAAGCGCCGCTGTTTTGCACGCCTTCGCGGGCGGCGG CGTGGCAGGCGTTGTGCCCCTCGCCAGCGACGCTGCTGGGCCTGGCCTGCGATGCCGAGC CGGAGCTGGACGGCAAAACCTTGCTCGAACGCCGCGACGCCAGTTTCGCTCGCACGCAAA AGCACTATTACGTCGACCCGCCACGCATCGAGCGCGGCTGGCGCAATCACCTGATCGACA TGCAGGGCCGCTCCTACCTCGACATGCTCAACAACGTCGCGGTGCTGGGGCACGGCCATC CGCGCATGGCGCAGGTCGCCGCGCGGCAGTGGTCGCTGCTCAACACCAATTCACGCTTCA ACTATGCGGCGGTGGCGGAATTCTCCGAACGCTTGCTGAAGCTGGCGCCGGACGGCATGG ACCGGGTGTTTCTGGTCAACAGCGGCAGCGAAGCCAACGACCTGGCGATTCGCCTGGCCT GGGCCTACAGCGGCGGGCGCGACATGCTCAGCGTGCTCGAGGCCTATCACGGCTGGACAG TCGGCGCCGATGCGGTATCGACATCCATTGCCGACAACCCGCGAGCGCTGGAAAGCCGTC CGGACTGGGTGCACCCGGTGACCGCGCCGAATATTTATCGTGGCCAATTTCGTGGTCTCG ATTCTGCGCCGGACTATGTGCGCAGCGTCGAGGCGCAACTGGCGCATATCGCCGCGCAGA AGCGCCAACTGGCCGGGTTCATCTGCGAACCGGTGTACGGCAATGCCGGCGGTATCTCGC TGCCGCCGAATTATCTGAAACAGGTCTATGCGCTGGTGCGGGCCCAGGGCGGGGTGTGCA TCGCCGACGAAGTGCAGGTCGGTTACGGGCGCATGGGCCACTTTTTCTGGGGCTTCGAAG AGCAGGGCGTGGTGCCGGACATCATCACAATGGCCAAGGGCATGGGCAACGGTCAGCCGC TCGGCGCGGTGATCACTCGCCGGGAGATTGCCGAAGCGTTGGAAGCCGAAGGCTATTTCT TCTCGTCTGCCGGTGGCAGCCCGGTGAGCTGTCAGATCGGCATGGCGGTTCTGGATGTCA TGGAAGAAGAAAAGCTCTGGGAAAATGCGCAGGTGGTGGGCGCTCACTTCAAGGCGCGTC TGCAAGCGCTGATCGATAAACATCCGCTGGTGGGCGCGGTGCACGGATCCGGCTTTTACC TGGGGCTGGAGCTGATCCGCAATCGCGAGACACTCGAGCCGGCCACCGAGGAAACCACCC AGTTGTGCGATCGCTTGCGTGAGCTGGGGATCTTCATGCAGCCGACCGGGGACGATCTGA ACATTCTCAAGATCAAACCGCCGATGGTGACCTCGCGCCGTAGCGTGGACTTCTTTGTCG ACATGCTGGATCGGGTGTTCGAGGAAGGCCTGTAACTGTCACCGAGCTTTTGCAGGAGTG AGCCTGCTCGCGATGGCGGTGTGTCAGTCGGCCTTGTGTCGTTTGACTTGCCGCCATCGC GAGCAGGCTCACTCCTACAGGGACTGATGTTAATTCGATTTGTATCGGTATTTATCGAAG TTTTTTAGACGCGCTGCATTTTTAAGCATTTAAAATACGATATTTATCGGTTATAAAGTC GTCATTGCTTTGCAACCCTTCGACGGTTCCCAGGAGTCCTGATCCGATGACCACTTTGAA AAGTACCCCGCGTGACGATGGCTTCTACATGCCGGCCGAGTGGGCGCCGCAGACCCAGAC CTGGATGATCTGGCCCGAGCGCCCGGACAACTGGCGCCTCGGTGGCAAGCCGGCGCAAGC AGCGCATGTTGCCGTCGCCAAGGCCATCGCCCGTTTCGAACCGGTGACCGTCGCCGTGTC GGCCGGCCAGTACGAGAATGCCCGTGCGCGTCTCGACGTGCCGAATATCCGTGTGGTCGA GATGTCCAGCGATGACGCCTGGGTGCGCGACACCGGTCCGACGTTCGTGATCAACAACAG CGGCGAAGTGCGCGGTGTGAACTGGGACTTCAACGCTTGGGGTGGTTTTGAGGGCGGACT GTACTCGCCGTGGAACCGTGATTCGCAGGTCGGCGGCAAGATCCTCGAGATCGAGCGCAG CCCGCGTTATCGCACCGAAGGTTTTGTGCTCGAAGGCGGTTCGATTCACGTCGACGGCGA AGGCACGCTGATCACCACTGAAGAGTGCCTGCTCAATCACAACCGCAACCCGCACCTGGG TCGCGAAGAGATTGAGGCGGTGCTACGCGACAATCTGTCGGTGGATAAAATCATCTGGCT GCCGGACGGCCTGTTCAACGACGAAACCGATGGCCATGTGGATAACTTCTGCTGCTACGT GCGTCCGGGCGAAGTGTTGCTGGCCTGGACTGACGATCCGCAGGATCCGAACTACCCGCG CTGCCAGGCTGCGATGAAAGTGCTGCAAAGCAGCACCGACGCCAAGGGACGCCCGTTCAC GGTGCACAAGATGCCGATTCCGGGGCCGCTGTACGCGACCGGAGAAGAGTGCGCCGGGGT CGATCCGGTGGACGGTACTCAGGAACGCAACCCGAGCGTGCGCCTGGCCGGCTCCTACGT GAACTTCCTGATCGTCAACGGCGGCATCATCGCGCCAAGCTTCGACGATCCGATGGATGC TCCTGCGCGGGAAATCCTGCAGAAGCTGTTCCCGCAACACGAAGTGGTGATGGTCCCGGG CCGTGAACTGTTACTGGGCGGTGGCAATATCCACTGCCTTACCCAACAACAGCCAGCCCC GCACAAAGAGTGAGTTGAGACGTAACACCTTGAGTTGATTAGTAAATCAGCCAAGGGAAA AATTAGCTCGCTATCGATACAAACAAGCCCGCGGCCCAACTGGACCGCGGGCTTGTTTGT ATCCGCTGGTCGACAAATCGCAAACCTTGGCATAGCTCTTGTATCGGACGAAGCGCACTA GGGAGGGGAAGGAACTTCAACAGTTCTGTCATAAACCTTGGATAACTTAGCCGCTCACGA ACGGGGAGAGAGCGCTGAAATGAACGCCGAAGTGAACGTAGTCAGCGAGCGGACTTTGCA TCCCATGGCCGTAAACGGCGAATCGCTCCAGATTGTCGCGCACTTTTTGAAATCCAACGG AACGCGTCAGATCAGGGAACCTGATCCGCGCCGGATGATGATCGAGCGCTATCCCGCTGG CCTGTTCAGCGAGGCCGAACTGGAAGCGTTATGGGCTGTGATGGAAGGATAAGAAGAACA ACAGGGATTGGTAAAAGCGCTGCCGGGATGGCGGCGCTTTTTTATGGAAAACCGAAAAGA TCGCAGCCTTCGGCAGCTCCTACATGGGGTGGTGTGCTTCCCTGTAGGAGCTGCCGAAGG CTGCGATCTTTTGATCCTGCTTTTAAAAACTATAGGTACCGGTCATTACCACGCTGCGCG GTGCACCCGGCTGGATCTGATTCTGGCTGGTGGCCGAGGCGTAATACTCACGATCGGTGA TGTTGTTCAGTGCTGCGCGCAAGTCCCAGTCCTTGAAGCGGTAGCCGACCAGCGCATCCC AACGGCCGTACCCCGGCAACACCGTGGTGTTGGCGTTATCGGCATAACGCTGGCCGACCA GGGTCAGGCCGGTTTCGCCGTACCAGCCCATTTCCGGTTTCCAGGTCAGGAACAGGCTGC CGTTGTGTTTGGCTACGTTGTTGACACGCTTGCCTTCCAGGCCGTTGTTGTCCTTCTCGA TGGTGGTGTCTTGCACGCCGACGCCACCGCGCATGTACCAGTTGCCGACCAGTTTGCCAG TCGCGGTCAGTTCGATGCCGCGCGAGCGCTGCAGGCCGGTCATGACGGTCAGGGTCGGAT CGTTCGGATCGCTGGTGCGGCGGTTGTAAAGCTCCAGGTCATAGACCGCCAGCGTGGTGC TGAGGCGATCATCGAGCCAGTCGCTTTTCACCCCGATCTCTTTCTGTTTGGTCAGCTCCG GGCTCAAGTCGTTGCTATTGCCGGCGGCGCCCGGGGTGATGCCGATCAGGCCACCGCCGA CGGGCGAGAAGGTCTTCGACCACGAGGCGTAGAACGAATGGTTCTGCAGCGGCGTCCAGA CAATCCCGAAGCGCGGGCTGGTGCTGTGGCTGTCGCGGTCTTCGGAAATGTTCTTGAGCT GGTTGGTCGACTCGATATCGAACGTGTCGTAGCGCAGACCGGCCAGCAGTTGCCATTGAT CGTTCAGGCGCAGTTGGTCCTGCACGTAGACCGCACGGCTTTCGACTTCGGTATGACTGT CGCTGAACACCTGCATGCTGCCCGTGTGGCGCAGCTCGCGGGTGGGGTTGAACAGGTCAA GCGATGGCACCGGTTGTGCGCCCGGCGTTTTGCCAGTCGCAGCGTTGTACAGCTTCGGAT CGCGGCGCTGGCTGCCGATCTCGACGCCGGTCAACAAGCGATGCTCCAGGCCAAAGGTAT CGAAACCGCCTTCGAGCTCGATGTTGTTGTAAACGTTGCGGGTGGTCAGATCCTGCTGCC AGTGCTGGCGTACGACCTTGTTGGTTTTCGGGTCGAAGTTGGTGAGGTAAGTGTTATCGA AATCACTGTCGAGCTTGAACACTCCCAAGGTCTGGCGCAGTTGCCAGTTATCGTTGATCT CGTAGGTGAGTTTCGAGCGCAGGGACTGCGCCTTGTCGTCGATGAAATCGTGATCGTTGC CGTAGGTGGTGTCACGACCAACGTCTGCCGGGCGGCCATTCACCCCCGGAATGCCGCGAT CCGGCGTGCGGTTGTAACGGCTGTATTCGTATTGCACCAGCCAGTTGAGGTCCGGGGTCA CCTGCCAGCTCATCGACGGGGCGAACAGTTGGCGGTTGCCACTGACACCGTCGCGGAAGC TGTTTTCGTCCATGTTGCCCATGTTCAGGCGCAGGCTGATGTTTTCACTCGGGTCGGTGC TGAGGTCGGCGTACAGGCTGCGCAGGTCTTCGCTGCCGGCCTGGGCTTCGATGGTCGAAC GGCGGCCGAACTCGGGCATCTTGCTCACGCGGTTGACGATCCCGCCCTGGCTGCCACGGC CGTAGAGCACCGCTGCCGGGCCTTTGAGCACTTCGACCCGCTCGACATTGTGCAGGTCGC GCTTGTACTGGCTGTCGTCGCGAATACCGTCCAGATAGAAATCGTTGCTGGCATCGAAGC CGCGGATGCGCAGGCTGTCGAAGCGCGTATCGGCGCTGCTGCTGACGTTGGGAATACCGC TCAGGGCGTCACCGATGTCATTGGTGCCGTAATTGGCGACGTTCGAGGTCTTGATCGAGT CGATGGCCTGCGGCACATAGCGCACCGGTGTCGAGGTGCGGGTGGCGGTGCTGCTGATCT TGACGCGCGGATCCTCGGCTTGCTCTTCGGCGCTGATCGCCGTGGCGGGCAACTCGGTGG CGGAATAAGCAAAACCGCTGGACAGAACGGCAGACAATCCAAGGGTGACAGGCGTGAGGC GGAACGGGGCAGGCAT
Region | 1 |
Region Length | 10.5Kb |
Completeness(score) | incomplete(20) |
Specific Keyword | tail |
Region Position | 190201-200776 |
# tRNA | 0 |
# Total Proteins | 8 |
# Phage Hit Proteins | 6 |
# Hypothetical Proteins | 1 |
Phage + Hypothetical Protein % | 87.5% |
# Bacterial Proteins | 1 |
Attachment Site | no |
# Phage Species | 3 |
Most Common Phage Name(hit genes count) | PHAGE_Entero_phi92_NC_023693(4) PHAGE_Sphing_PAU_NC_019521(4) PHAGE_Escher_phAPEC8_NC_020079(4) PHAGE_Mycoba_MoMoMixon_NC_023733(1) PHAGE_Mycoba_ArcherS7_NC_021348(1) PHAGE_Bacill_SP_15_NC_031245(1) PHAGE_Mycoba_Lukilu_NC_041901(1) PHAGE_Bacill_G_NC_023719(1) PHAGE_Synech_S_SM2_NC_015279(1) PHAGE_Mycoba_Bxz1_NC_004687(1) PHAGE_Mycoba_Alice_NC_028986(1) PHAGE_Salmon_SJ46_NC_031129(1) PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082(1) PHAGE_Synech_ACG_2014f_NC_026927(1) |
First Most Common Phage # | 4 |
First Most Common Phage % | 50% |
GC % | 60.65% |
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Specific Keyword: | The specific phage-related keyword(s) found in protein name(s) in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
# tRNA: | The number of tRNA genes present in the region. |
# Total Proteins: | The number of ORFs present in the region. |
# Phage Hit Proteins: | The number of proteins in the region with matches in the phage protein database. |
# Hypothetical Proteins: | The number of hypothetical proteins in the region without a match in the database. |
Phage + Hypothetical Protein %: | The combined percentage of phage proteins and hypothetical proteins in the region. |
# Bacterial Proteins: | The number of proteins in the region with matches in the nrfilt database. |
Attachment Site: | The putative phage attachment site. |
# Phage Species: | The number of different phages that have similar proteins to those in the region. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
First Most Common Phage #: | The highest number of proteins in a phage most similar to those in the region. |
First Most Common Phage %: | The percentage of proteins in # Phage Hit Proteins that are most similar to the Most Common Phage proteins. |
GC %: | The percentage of GC nucleotides of the region. |
Questionable (score 70-90)
Incomplete (score < 70)
Region: | The number assigned to the region. |
Region Length: | The length of the sequence of that region (in bp). |
Completeness: | A prediction of whether the region contains a intact or incomplete prophage based on the above criteria. |
Score: | The score of the region based on the above criteria. |
# Total Proteins: | The number of ORFs present in the region. |
Region Position: | The start and end positions of the region on the bacterial chromosome. |
Most Common Phage: | The phage(s) with the highest number of proteins most similar to those in the region. |
GC %: | The percentage of GC nucleotides of the region. |
Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
- If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
- If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
- If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
- If the size of the region is greater than 30 Kb, the score will be increased by 10.
- If there are at least 40 proteins in the region, the score will be increased by 10.
- If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
gi|00000000|ref|NZ_JAAQYM010000005.1| Pseudomonas koreensis strain DSM 16610 5_657737_46.9183, whole 657737, gc%: 61.37%
Download details as .txt file: detail.txt file_download
Hits against Bacterial Database or GenBank File
Region 1, total 8 CDS
# | CDS Position | BLAST Hit | E-Value | Sequence |
---|---|---|---|---|
1 | complement(190201..191070) | PHAGE_Entero_phi92_NC_023693: Phi92_gp064; HBN98_RS16780; phage(gi726646997) | 2.95e-36 | Showinfo_outline |
2 | complement(191067..191612) | PHAGE_Entero_phi92_NC_023693: Phi92_gp065; HBN98_RS16785; phage(gi726646998) | 3.13e-66 | Showinfo_outline |
3 | complement(191609..192484) | PHAGE_Entero_phi92_NC_023693: Phi92_gp066; HBN98_RS16790; phage(gi726646999) | 1.14e-134 | Showinfo_outline |
4 | complement(192481..193563) | PHAGE_Entero_phi92_NC_023693: Phi92_gp067; HBN98_RS16795; phage(gi726647000) | 2.87e-122 | Showinfo_outline |
5 | 193803..196715 | PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; HBN98_RS16800; phage(gi100190) | 5.25e-10 | Showinfo_outline |
6 | 196967..198073 | agmatine deiminase; HBN98_RS16805 | 0.0 | Showinfo_outline |
7 | 198320..198532 | hypothetical protein; HBN98_RS16810 | 0.0 | Showinfo_outline |
8 | complement(198683..200776) | PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; HBN98_RS16815; phage(gi100064) | 5.92e-05 | Showinfo_outline |
>complement(190201..191070)
PseudomonaskoreensisMKILICGQNGQVSRELQTCLDGLGNLVVQGRDRLDLAQPAQIRQQVRQVAPDLIINAAAHTAVDQAQSEPALAFAINATGPGVLAEEAALLDVPLIHYSTDYVFDGNKHAPYVESDATNPLGVYGKSKLAGEQAVAAAHAQHLILRTSWVYSTHGRNFLLTMQRLLQEKPELRVVADQIGAPTWAGSIARSTLALIKRWQDGQAGAWGTYHLTAQGETSWFGFAQAIGNALREQGKPCATLLPIPSSDYPTPAARPLNSRLDCSSLQREWGVSQPDWQTALHECLARQA
>complement(191067..191612)
PseudomonaskoreensisMNVTETSLPGVVIIEPKVYGDERGFFYESFNARAFAEATGVDAQFVQDNHSRSHKGVLRGLHYQLENTQGKLVRVTLGEVLDVAVDIRRSSPNFGKWVAVRLSADNHRQLWVPEGFAHGFVVLSDVAEFLYKTTDYYTPSAERSIRWDDPTLAIDWQLKEAPQLSAKDQDSKSLQEADLFP
>complement(191609..192484)
PseudomonaskoreensisMMKGIVLAGGSGTRLHPITLGVSKQLLPVYDKPMIYYPISVLMLAGIKDILVISTPHDLPQYRNLLGDGSQFGVSFSYAEQPSPDGLAQAFLIGEHFIGNDPVCLILGDNIFHGQYFGEQLKKAAQQKAGATVFGYWVKDPERFGVIDFDSDGRALSIEEKPAKPKSSYAVTGLYFYDNDVVRIAKAVKPSPRGELEITDVNNAYLQRGDLQVERFGRGFAWLDTGTHDSLLEASQYVQTIEHRQGLKVACLEEIAYQNGWISRDYLLERAQYFGKTGYGQYLFSIAGDNQ
>complement(192481..193563)
PseudomonaskoreensisMRILITGGAGFIGSALVRHLIRNTDHEVLNLDKLTYAGNLESLTSIADNSRYEFVQADIVDHPTVSAILQRFQPQAIMHLAAESHVDRSIDGPSEFIQTNIVGTYSLLEAARAYWQGLTEPEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLPVLLTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLFVDDHARALLKVVTEGVVGETYNIGGHNEQKNIDVVTGICTLLEELAPHKPQGVVHFRDLITFVKDRPGHDLRYAIDAGKIERELGWVPEETFETGLRKTVQWYLDNLDWCRRVQDGSYQGERLGAMDIKELQA
>193803..196715
PseudomonaskoreensisMSLATLIHRASLPSPQVSAQQAQQWLAEHYGLSGTLQALGSQQDLNFRVDSERGRFVLKICRGDYSLVELQAQHAGLKYLAEHSTVHVPRVIAANNGEDLLTLQADGEAVHVRLLDYIEGQSLTHLDHLGHQVVAGFGRLCGEMDLALCGFDHPGLERTLQWDARHASALISHLLPVIEDAQQRALIADAAEQAERRLQPLLDKLPVQAIHMDITDDNVVWQRDARRHWQLQGVIDFGDLIRTWRITDLSVTCAALLHHAAGDPFVILPAVQAYHAVNPLQHEELLALWPLIVARAAVLVLSGEQQVSIDPGNTYSRENLTHEWEIFRVATSVPLALMEAAILTATGQHLPSIGSEGFAPLLPGLVGREFALIDLGVLSVHFEAGNWEQDGIDQRLLNEAAAVHGLAASRYGQYRLSRTRPDRAEEPDTFALHVELRVPGGTTVEAPFAGVLHQASDGVLQLDGPQLSVRLWGVTPSLHSGAALVKGQVLGAVSGPLRVQLVRGSQVEAPLFCTPSRAAAWQALCPSPATLLGLACDAEPELDGKTLLERRDASFARTQKHYYVDPPRIERGWRNHLIDMQGRSYLDMLNNVAVLGHGHPRMAQVAARQWSLLNTNSRFNYAAVAEFSERLLKLAPDGMDRVFLVNSGSEANDLAIRLAWAYSGGRDMLSVLEAYHGWTVGADAVSTSIADNPRALESRPDWVHPVTAPNIYRGQFRGLDSAPDYVRSVEAQLAHIAAQKRQLAGFICEPVYGNAGGISLPPNYLKQVYALVRAQGGVCIADEVQVGYGRMGHFFWGFEEQGVVPDIITMAKGMGNGQPLGAVITRREIAEALEAEGYFFSSAGGSPVSCQIGMAVLDVMEEEKLWENAQVVGAHFKARLQALIDKHPLVGAVHGSGFYLGLELIRNRETLEPATEETTQLCDRLRELGIFMQPTGDDLNILKIKPPMVTSRRSVDFFVDMLDRVFEEGL
>196967..198073
PseudomonaskoreensisMTTLKSTPRDDGFYMPAEWAPQTQTWMIWPERPDNWRLGGKPAQAAHVAVAKAIARFEPVTVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSGEVRGVNWDFNAWGGFEGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTEECLLNHNRNPHLGREEIEAVLRDNLSVDKIIWLPDGLFNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYPRCQAAMKVLQSSTDAKGRPFTVHKMPIPGPLYATGEECAGVDPVDGTQERNPSVRLAGSYVNFLIVNGGIIAPSFDDPMDAPAREILQKLFPQHEVVMVPGRELLLGGGNIHCLTQQQPAPHKE
>198320..198532
PseudomonaskoreensisMNAEVNVVSERTLHPMAVNGESLQIVAHFLKSNGTRQIREPDPRRMMIERYPAGLFSEAELEALWAVMEG
>complement(198683..200776)
PseudomonaskoreensisMPAPFRLTPVTLGLSAVLSSGFAYSATELPATAISAEEQAEDPRVKISSTATRTSTPVRYVPQAIDSIKTSNVANYGTNDIGDALSGIPNVSSSADTRFDSLRIRGFDASNDFYLDGIRDDSQYKRDLHNVERVEVLKGPAAVLYGRGSQGGIVNRVSKMPEFGRRSTIEAQAGSEDLRSLYADLSTDPSENISLRLNMGNMDENSFRDGVSGNRQLFAPSMSWQVTPDLNWLVQYEYSRYNRTPDRGIPGVNGRPADVGRDTTYGNDHDFIDDKAQSLRSKLTYEINDNWQLRQTLGVFKLDSDFDNTYLTNFDPKTNKVVRQHWQQDLTTRNVYNNIELEGGFDTFGLEHRLLTGVEIGSQRRDPKLYNAATGKTPGAQPVPSLDLFNPTRELRHTGSMQVFSDSHTEVESRAVYVQDQLRLNDQWQLLAGLRYDTFDIESTNQLKNISEDRDSHSTSPRFGIVWTPLQNHSFYASWSKTFSPVGGGLIGITPGAAGNSNDLSPELTKQKEIGVKSDWLDDRLSTTLAVYDLELYNRRTSDPNDPTLTVMTGLQRSRGIELTATGKLVGNWYMRGGVGVQDTTIEKDNNGLEGKRVNNVAKHNGSLFLTWKPEMGWYGETGLTLVGQRYADNANTTVLPGYGRWDALVGYRFKDWDLRAALNNITDREYYASATSQNQIQPGAPRSVVMTGTYSF
Questionable (score 70-90)
Incomplete (score < 70)
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ORF Start: 190201
ORF Stop: 191070
Strand: Backward
Protein Sequence: MKILICGQNGQVSRELQTCLDGLGNLVVQGRDRLDLAQPAQIRQQVRQVAPDLIINAAAHTAVDQAQSEPALAFAINATGPGVLAEEAALLDVPLIHYSTDYVFDGNKHAPYVESDATNPLGVYGKSKLAGEQAVAAAHAQHLILRTSWVYSTHGRNFLLTMQRLLQEKPELRVVADQIGAPTWAGSIARSTLALIKRWQDGQAGAWGTYHLTAQGETSWFGFAQAIGNALREQGKPCATLLPIPSSDYPTPAARPLNSRLDCSSLQREWGVSQPDWQTALHECLARQA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: HBN98_RS16780, Phi92_gp064, phage(gi726646997), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 2.95e-36
ORF Start: 191067
ORF Stop: 191612
Strand: Backward
Protein Sequence: MNVTETSLPGVVIIEPKVYGDERGFFYESFNARAFAEATGVDAQFVQDNHSRSHKGVLRGLHYQLENTQGKLVRVTLGEVLDVAVDIRRSSPNFGKWVAVRLSADNHRQLWVPEGFAHGFVVLSDVAEFLYKTTDYYTPSAERSIRWDDPTLAIDWQLKEAPQLSAKDQDSKSLQEADLFP
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: HBN98_RS16785, Phi92_gp065, phage(gi726646998), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 3.13e-66
ORF Start: 191609
ORF Stop: 192484
Strand: Backward
Protein Sequence: MMKGIVLAGGSGTRLHPITLGVSKQLLPVYDKPMIYYPISVLMLAGIKDILVISTPHDLPQYRNLLGDGSQFGVSFSYAEQPSPDGLAQAFLIGEHFIGNDPVCLILGDNIFHGQYFGEQLKKAAQQKAGATVFGYWVKDPERFGVIDFDSDGRALSIEEKPAKPKSSYAVTGLYFYDNDVVRIAKAVKPSPRGELEITDVNNAYLQRGDLQVERFGRGFAWLDTGTHDSLLEASQYVQTIEHRQGLKVACLEEIAYQNGWISRDYLLERAQYFGKTGYGQYLFSIAGDNQ
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: HBN98_RS16790, Phi92_gp066, phage(gi726646999), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 1.14e-134
ORF Start: 192481
ORF Stop: 193563
Strand: Backward
Protein Sequence: MRILITGGAGFIGSALVRHLIRNTDHEVLNLDKLTYAGNLESLTSIADNSRYEFVQADIVDHPTVSAILQRFQPQAIMHLAAESHVDRSIDGPSEFIQTNIVGTYSLLEAARAYWQGLTEPEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLPVLLTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQVRDWLFVDDHARALLKVVTEGVVGETYNIGGHNEQKNIDVVTGICTLLEELAPHKPQGVVHFRDLITFVKDRPGHDLRYAIDAGKIERELGWVPEETFETGLRKTVQWYLDNLDWCRRVQDGSYQGERLGAMDIKELQA
Homolog/Ortholog Species: Phage-like protein
Homolog/Ortholog Protein: HBN98_RS16795, Phi92_gp067, phage(gi726647000), PHAGE_Entero_phi92_NC_023693
Homolog/Ortholog E-Value: 2.87e-122
ORF Start: 193803
ORF Stop: 196715
Strand: Forward
Protein Sequence: MSLATLIHRASLPSPQVSAQQAQQWLAEHYGLSGTLQALGSQQDLNFRVDSERGRFVLKICRGDYSLVELQAQHAGLKYLAEHSTVHVPRVIAANNGEDLLTLQADGEAVHVRLLDYIEGQSLTHLDHLGHQVVAGFGRLCGEMDLALCGFDHPGLERTLQWDARHASALISHLLPVIEDAQQRALIADAAEQAERRLQPLLDKLPVQAIHMDITDDNVVWQRDARRHWQLQGVIDFGDLIRTWRITDLSVTCAALLHHAAGDPFVILPAVQAYHAVNPLQHEELLALWPLIVARAAVLVLSGEQQVSIDPGNTYSRENLTHEWEIFRVATSVPLALMEAAILTATGQHLPSIGSEGFAPLLPGLVGREFALIDLGVLSVHFEAGNWEQDGIDQRLLNEAAAVHGLAASRYGQYRLSRTRPDRAEEPDTFALHVELRVPGGTTVEAPFAGVLHQASDGVLQLDGPQLSVRLWGVTPSLHSGAALVKGQVLGAVSGPLRVQLVRGSQVEAPLFCTPSRAAAWQALCPSPATLLGLACDAEPELDGKTLLERRDASFARTQKHYYVDPPRIERGWRNHLIDMQGRSYLDMLNNVAVLGHGHPRMAQVAARQWSLLNTNSRFNYAAVAEFSERLLKLAPDGMDRVFLVNSGSEANDLAIRLAWAYSGGRDMLSVLEAYHGWTVGADAVSTSIADNPRALESRPDWVHPVTAPNIYRGQFRGLDSAPDYVRSVEAQLAHIAAQKRQLAGFICEPVYGNAGGISLPPNYLKQVYALVRAQGGVCIADEVQVGYGRMGHFFWGFEEQGVVPDIITMAKGMGNGQPLGAVITRREIAEALEAEGYFFSSAGGSPVSCQIGMAVLDVMEEEKLWENAQVVGAHFKARLQALIDKHPLVGAVHGSGFYLGLELIRNRETLEPATEETTQLCDRLRELGIFMQPTGDDLNILKIKPPMVTSRRSVDFFVDMLDRVFEEGL
Homolog/Ortholog Species: Fiber protein
Homolog/Ortholog Protein: HBN98_RS16800, chaperone for tail fiber formation, phage(gi100190), PHAGE_Mycoba_Lukilu_NC_041901
Homolog/Ortholog E-Value: 5.25e-10
ORF Start: 196967
ORF Stop: 198073
Strand: Forward
Protein Sequence: MTTLKSTPRDDGFYMPAEWAPQTQTWMIWPERPDNWRLGGKPAQAAHVAVAKAIARFEPVTVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSGEVRGVNWDFNAWGGFEGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTEECLLNHNRNPHLGREEIEAVLRDNLSVDKIIWLPDGLFNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYPRCQAAMKVLQSSTDAKGRPFTVHKMPIPGPLYATGEECAGVDPVDGTQERNPSVRLAGSYVNFLIVNGGIIAPSFDDPMDAPAREILQKLFPQHEVVMVPGRELLLGGGNIHCLTQQQPAPHKE
Homolog/Ortholog Species: Non phage-like protein
Homolog/Ortholog Protein: HBN98_RS16805, agmatine deiminase
Homolog/Ortholog E-Value: N/A
ORF Start: 198320
ORF Stop: 198532
Strand: Forward
Protein Sequence: MNAEVNVVSERTLHPMAVNGESLQIVAHFLKSNGTRQIREPDPRRMMIERYPAGLFSEAELEALWAVMEG
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: HBN98_RS16810, hypothetical protein
Homolog/Ortholog E-Value: N/A
ORF Start: 198683
ORF Stop: 200776
Strand: Backward
Protein Sequence: MPAPFRLTPVTLGLSAVLSSGFAYSATELPATAISAEEQAEDPRVKISSTATRTSTPVRYVPQAIDSIKTSNVANYGTNDIGDALSGIPNVSSSADTRFDSLRIRGFDASNDFYLDGIRDDSQYKRDLHNVERVEVLKGPAAVLYGRGSQGGIVNRVSKMPEFGRRSTIEAQAGSEDLRSLYADLSTDPSENISLRLNMGNMDENSFRDGVSGNRQLFAPSMSWQVTPDLNWLVQYEYSRYNRTPDRGIPGVNGRPADVGRDTTYGNDHDFIDDKAQSLRSKLTYEINDNWQLRQTLGVFKLDSDFDNTYLTNFDPKTNKVVRQHWQQDLTTRNVYNNIELEGGFDTFGLEHRLLTGVEIGSQRRDPKLYNAATGKTPGAQPVPSLDLFNPTRELRHTGSMQVFSDSHTEVESRAVYVQDQLRLNDQWQLLAGLRYDTFDIESTNQLKNISEDRDSHSTSPRFGIVWTPLQNHSFYASWSKTFSPVGGGLIGITPGAAGNSNDLSPELTKQKEIGVKSDWLDDRLSTTLAVYDLELYNRRTSDPNDPTLTVMTGLQRSRGIELTATGKLVGNWYMRGGVGVQDTTIEKDNNGLEGKRVNNVAKHNGSLFLTWKPEMGWYGETGLTLVGQRYADNANTTVLPGYGRWDALVGYRFKDWDLRAALNNITDREYYASATSQNQIQPGAPRSVVMTGTYSF
Homolog/Ortholog Species: Hypothetical protein
Homolog/Ortholog Protein: HBN98_RS16815, hypothetical protein, phage(gi100064), PHAGE_Salmon_SJ46_NC_031129
Homolog/Ortholog E-Value: 5.92e-05
Terminase
Portal Protein
Coat Protein
Tail Shaft
Integrase
Phage-like Protein
Other
Transposase
Plate Protein
tRNA
Download data as .txt file: png_input file_download