gi||ref|CAAZ01000043.1| Salmonella enterica subsp. enterica serovar Typhi str. E98-3139, 44081, gc%: 48.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
25058..25071                       attL                                                                                 N/A                 GAGTCCGGCCTTCG
25241..26506                       PHAGE_Entero_P4_NC_001609: integrase; PP_00032; phage(gi9627511)                     0.0                 MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDIIQYEHITPYEYARVCNI
complement(26569..27645)           PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; PP_00033; phage(gi371496162)          1.74e-13            MIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPLPGLESKRFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFDFLDPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKITDFGIATLTQELFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIEASTDIWPLGAMMFKLLTGDYPFGVYLDAAVNVKTKNRMEWPTFMTANPQYQSLSQDLQKIVDKCLSYDSDKRPTAETLVKACETLCYLSEERHVGRVNNLIQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTRNTVCYSTFDGHPWPRAHPVILWKD
complement(27642..28700)           PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; PP_00034; phage(gi371496162)          2.49e-64            MKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKDGEEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDLNYNPSESHPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKILDFGLARTSGTEAFTHSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLVLDLFGIEKPDELYEHPPAAITNIPELGKILPKDLARTFISCLSHDKYARPAMSSVRDQIAKYLLKDRHRALFVLNGKKYEINAKNKSVTITWGTSGSMEIVYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLINEKSRSFVTFDISRPEVIS
complement(28690..29691)           PHAGE_Plankt_PaV_LD_NC_016564: protein phosphatase; PP_00035; phage(gi371496161)     1.74e-31            LAIPFFAMALLDGMGGMQDGKQCATIALSTLFYSLIKFRSDPPESRLLKATLEANSVVYDYAKGHGGSTLSAVIIENGSAPVIVNVGDSRIYSFSLDCGLTAISSDDSLEALGGRGRGLLQFIGMGESIKPHINILDKNHKNIILTSDGTHFISHSAFEELLSHSSDFSTSAQRIAQYVQWCGAKDNASFGIINCNDIENSLNSHKDIGVELWDPHGNLHIMWMKNYPAAQNYFSQNIVDDQDKEPSPIIDDDGFENKKTLNNPSTKNLELDSETPQRELFSNESPEKSQDPSITSKAIKQRKNKDKKKAIEKIKKDQSVMINIKDEENKNED
29980..30102                       hypothetical; PP_00036                                                               N/A                 MQVHERPQAAPALVLRGIKNTGICMQNHAPYGCMAFFKEK
complement(30131..30697)           PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; PP_00037; phage(gi9627520)     5.86e-78            VTTVTIQQAFEACQTNKNTWLKRKAELADLEREYREQLLAGDEQIPRRMQDLRDNIDVKKWEINQAAGRYIRSHEEVQHISIRNRLHDFMQQHGAELAATLAPELMGYHEQIPAVKQSAMQHSVDYLREALSVWLAAGEKINYSVQDNDMLTTIGFRPDAASRDDNREKFTPAQNLIYTRRRAELATR
complement(30825..31190)           hypothetical; PP_00038                                                               N/A                 MSGETSLRATVTRELGDALNMQSALYHFDMEQEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKRPRTGRGLNYVSLSVLQKDRARPYQPVSVGKRQTALSPVYQYRMFGHFPHH
complement(31247..31765)           PHAGE_Entero_P4_NC_001609: head size determination protein sid; PP_00039; phage(gi9627518)     2.25e-09            MNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTALSAPMKKRSLPTPTASGRRR
32239..32505                       PHAGE_Entero_P4_NC_001609: transcriptional regulator; PP_00040; phage(gi9627517)     2.32e-41            MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIAERNRGYDA
32502..33053                       PHAGE_Entero_P4_NC_001609: putative CI repressor; PP_00041; phage(gi9627516)         1.80e-47            MMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
33050..33277                       hypothetical; PP_00042                                                               N/A                 MRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
33274..33594                       PHAGE_Entero_P4_NC_001609: hypothetical protein; PP_00043; phage(gi9627513)          1.56e-66            MKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
33609..35942                       PHAGE_Entero_P4_NC_001609: DNA primase; PP_00044; phage(gi9627512)                   0.0                 MKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVDAVTGNLPPVALEVIAAAEAETEADRKAAAALAVKLMEKTRPASGNAYLTRKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGACHTIEGKKQAGKRLWVAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTSPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPEERDPQLRDKIARELAIIVRQLMQKFSDPMTARTLLQSQQNSDEALSIKRDADPTFDFCGYLEMLPQTNGMFMGNASIIPRNYRKYLYHAYLAYMEANGYRNVLSLKMFGLGLPMMLKEYGLNYEKRHTKQGIQTNLSLKEESYGDWLPKCEEPAAT
complement(36040..36159)           hypothetical; PP_00045                                                               N/A                 VIFARPGCAWSGDAQGDKKFFQVLLFTLFTSGFLSIISW
36176..36304                       PHAGE_Entero_P4_NC_001609: hypothetical protein; PP_00046; phage(gi19263411)         9.49e-07            LFTLHQLITTYHHDIKKKSEEVNSVNSYMEKKNFTDVQYYPG
36471..36484                       attR                                                                                 N/A                 GAGTCCGGCCTTCG
complement(36851..36994)           PROPHAGE_Escher_MG1655: IS3 transposase B; PP_00047; phage(gi16128284)               1.12e-22            MHGEDFASREIMRAAVFNYIECDYNRWRRHSACGGLSPEQFENQNRA
complement(37090..37308)           PROPHAGE_Escher_MG1655: IS3 transposase B; PP_00048; phage(gi16128284)               7.59e-22            MYLRTGEGWLYLAVVIDLWPQSATGWSMSSRMTAQFACDALHIALWRRKRPEKSPYIQTEAVSTVQRITRAY
