gi|00000000|ref|NC_016980.1|  Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence. 267242, gc%: 46.70%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1..14                              attL                                                                                 N/A                 GGCACTGTTGCAAA
52..768                            PROPHAGE_Brucel_1330: transposase, putative; PNDMMAR_p001; phage(gi23502708)         2.64e-53            KlebsiellapneumoniaeMELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
807..820                           attL                                                                                 N/A                 TTTGCAACAGTGCC
807..820                           attL                                                                                 N/A                 TTTGCAACAGTGCC
complement(1400..2230)             protein OXA-1; PNDMMAR_p003                                                          N/A                 KlebsiellapneumoniaeMKNTIHINFAIFLIIANIIYSSASASTDISTVASPLFEGTEGCFLLYDASTNAEIAQFNKAKCATQMAPDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLDNSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITILNTLNL
complement(2361..2960)             PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; PNDMMAR_p004; phage(gi985761240)     4.91e-16            KlebsiellapneumoniaeMSNAKTKLGITKYSIVTNSNDSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGRWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTTPYGPAVYMVQTRQAFERTRSDA
complement(3059..3775)             PROPHAGE_Brucel_1330: transposase, putative; PNDMMAR_p005; phage(gi23502708)         2.64e-53            KlebsiellapneumoniaeMELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
3813..3826                         attR                                                                                 N/A                 TTTGCAACAGTGCC
complement(4373..5089)             PROPHAGE_Brucel_1330: transposase, putative; PNDMMAR_p007; phage(gi23502708)         2.64e-53            KlebsiellapneumoniaeMELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
5127..5140                         attR                                                                                 N/A                 TTTGCAACAGTGCC
complement(5182..5652)             PHAGE_Ralsto_RSM3_NC_011399: hypothetical protein; PNDMMAR_p008; phage(gi209901327)     3.67e-08            KlebsiellapneumoniaeMAGLNKEKKTINKTNSARFPAPPFQQQQQPFPGLAGKMQPRPDHGEDSYQGSGRLNGRKVLITSSPYGRMLATFLSGIAEFERDLISERVKSGLAVAKARGKRLGRQAGVRPKSDRLLPKVVAMRAEGRSYRWIARELGISKNTVADIVQRHRANA
6280..9297                         PROPHAGE_Xantho_306: Tn5044 transposase; PNDMMAR_p009; phage(gi21243163)             3.18e-94            KlebsiellapneumoniaeMAFEERVQILSEAEQDELYGPPAFTSADQRFFFSLNDKELAIAKSLRHRGQRYMLVVLLGYFKAKPVVLNPGFHQIKQDLKYVYQTVLPGPGCRPFNLTPKENERIYQRVFQLCNYQRWNVKDHGAALRDYLSQQARAWTAPRHLFDAANEYCSGQKIAIPAYSTLQKIISQVVGDEQEHMAAHLERAMSRGLKQALAELVNGTGPLPFRQLRQSARNFTGTELEKELIVYRHIQHWMPEVDLLLSTLSLSQKNLQHLAEKVDYYGAKLKRQTVGSQWLYLLCYLQTRWQQALERIADGFVHHVRQTKQKAKDYAQEAVFKDWQKAAKNVSKAAEVLHLFIDDSIDLQLPFATVRQQALSLLTKRDLESVCLFLNEQRRSVDEAMWQYCDEKESLRKGLLRELFLCLRFEGCDGTQHLAAALAKTQNELNGQDAQLQTADTRLLSKKSREFLLDGEGNILIDRYEWFLYQQIPDRLNGQLTLPDITKYRAHDADLIDGEHWRKNKYTLLQQSHFTKLAEEPEKLIKQMAMELDTRLYEVGEYLEQEDNRNIILRNPQGKRFWRLPSASKHHLVNNPFFQQIPTTGIADVLRMVDRDTGFIDCFAHVLGSQSRSRSHEYDLLAILVGNATNQGIYGMAQISDRTYDQLSTIQANYLRLETLNAANDNINNATAKLPIFRYYNIQEDVIHASADGQKFEARRETFKTRYSSKYFGTQKGVSAMTLIANHAAINARVIGANEHESHYIFDLLMSNTSDIIPDVLSTDTHGVNHVNFALLDLFGYQFAPRYAQVGKVINDMFDVKEDKEHRIQLCLKKPINTHRIAQHWDTIQRIAVSLKQRKTTQATLVRKLSEYKRNHPLLEALTEYNRLVKANYLLCYIDDASLRNYVQRALNRGEAYHQLRRAVSSVNGDQFRGSSDEEIQLWNECARLVTNAIVYFNSRILSQLLTSFEYQGDTKRIDIVKQASPVAWHNINLKGTYHFELSEKLPDLEELMRSIEGYLPVSEK
19921..19934                       attR                                                                                 N/A                 GGCACTGTTGCAAA

#### region 2 ####
40143..40670                       PHAGE_Entero_P22_NC_002371: EaC; PNDMMAR_p031; phage(gi51236732)                     1.70e-51            KlebsiellapneumoniaeMSDHVKFYDYYIVEGPEVQALIESFEPISQKRSELIKEAMTLVEAVGWVDSQSFGDKGDKIQSFVWKADHKFPCEITIKRRSYMDKVPVIVARGKGNTSDGREFNKKLDVIIKNVNNKLGPFPCWSSYIINHFGIMHSAHGGPVANRPFATAILTTYGGTISGRQDALGKVRTSS
40716..41696                       PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; PNDMMAR_p032; phage(gi971482498)     0.0                 KlebsiellapneumoniaeMSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGRVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYRGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
42228..43061                       PROPHAGE_Xantho_33913: IS1477 transposase; PNDMMAR_p033; phage(gi77747809)           8.67e-103           KlebsiellapneumoniaeMEVMCEAKGLSQRRACRLAGLSLSTCRYSAQRPAADAQLSLRITELALERRRFGYRRIWQLLRREGLCVNHKRVYRIYQLNGLSVKRRRRRKGLATERLPLLRPMAPNLTWSMDFVMDALATGRRIKCLTCVDDFTKECLTVTVAFGISGVQVTRILDSIALFRGYPAMIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKIINDWRLDYNECRPHSSLNYLTPAEFAAGWRNGKYEEKPTDITN
43476..44678                       PHAGE_Burkho_KL3_NC_015266: gp45; PNDMMAR_p034; phage(gi327198090)                   3.62e-41            KlebsiellapneumoniaeMCIHLNLMIFTKIIRGFISVKRLSANDTGATRSHQSGLYMPGAVIDELFPSLRDTQLRNPEALFSVHVSSHPDCPDLDDVRAIYYNNKFFGGTRDEKRLTGFGRQNPLQNPENTGALALLAFDHVPGTSSSYCDVWVCKDLTEEDILEPIIGEVIPGATIFGPGDKIIGGFVTETSPGRTKYKLPPEWTHHFPSGREIISFAACHYDRTTDDPDSQLTRRRKIEFEIFLAVEELHVLGQIAEGFATVNDFITLANSVSNRRKSRAGKSLELHLESLFKEHGATSFETQAITEGKKKPDFIFPSGAAYHDPDYPAERLRMLGVKTTCKDRWRQVLNEADRIDTVHLFTVQQGVSVAQFREMQSEGIRLVVPVGLHKAFPEEIRGELMSLSAFIDEIKKLYW
complement(44768..46183)           PHAGE_Burkho_KL3_NC_015266: gp47; PNDMMAR_p035; phage(gi327198092)                   4.80e-130           KlebsiellapneumoniaeMSEFDSLAEELVEEARNEEARQQQRDLSLIGKVLEIYDQKFVAELLRKLGNSDWTRETLNRWINGKCGPRSLTVTEASLLERLLPQPPANHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSEWNSYSVKTYKANWYCDPEAHIFNSDIRDVTLSHKEDVSEEDAYAHIDKSIPDHDVLLAGFPCQPFSLAGVSKKNSLGRKHGFECDTQGTLFFDVARIIMAKKPAIFVLENVKNLKSHDKGKTFRVIMDTLNELGYDVADAEATGADDPKVIDGKHFIPQHRERIVLVGFRRDLNLSQGFSLADISSLFPERKVLFRELLDSDVDDKYTLTPKLWDYLYKYAKKHQEKGNGFGFGLVKPDDDKAISRTISARYHKDGSESLVDRGWDSELGEKNFNDPDNMARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVPVFDAVAKLLESRIIEAVKARK
complement(46310..47053)           PHAGE_Shigel_Stx_NC_029120: DNA replication protein; PNDMMAR_p036; phage(gi985761263)     2.44e-82            KlebsiellapneumoniaeMSPVKNGDIMKRLRKMMPKTVEPAFNSPEELLQWQREQGQLRSEALERENRAMKMQRTFNRSGIRPLHQNCSFDNYLVECEGQMKALMLARQYVEEFEGNIASFIFSGKPGTGKNHLAAAICNDLLLRGKSVLIITVADIMSSMKDTFGNRNTSEEQLLNDLSKVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMNKLVGERVMDRMRLGNSLWVVFNWESYRHRVSGKEY

#### region 3 ####
176842..177432                     PHAGE_Cronob_vB_CsaP_GAP52_NC_019402: hypothetical protein; PNDMMAR_p130; phage(gi414087555)     7.58e-12            KlebsiellapneumoniaeMNMVSLSKNQTVSLSKQSTALSQLQFGLGWDPVKKKGLFGSIFGGNDSIDLDAGCVLLDAAGNKIDTIWFRKLKSSCGSVVHSGDNLTGEGDGDDEIIRVDLTKLPANVEYLAFTVNSFRGQSFNDVDNAFCRVVDQTNKELARYQLTEQGAHTGIIIASLRRNNGNWDFTAHGKASGGRTIDDMQFDIVSTVVKA
177429..178580                     protein TerA; PNDMMAR_p131                                                           N/A                 KlebsiellapneumoniaeMNLTPGGNAPLIAQDLRVRVISGGPVDASAFRLFADGKVRGDSDMVFYGQPRNEDGSISFSAEGTNSVFTVDLSRLKPDVQKVAFTVTCDGSHTVSSLNHLSIQIESGNTSLISAQVELSGRQEAALILGEVYRRNGDWKFRFIAQGFNGGLKPLAEYYGVNVADEPAPVTPPPAPPAPPKVSLSKVSLTKEKPAISLAKKDNFGEIRINLNWHRGSGSGGLLGGMFGSNKAIDLDLGAFVELADGYKSVVQALGNAFGNYHSEPYVQLQGDDRTGEALDGEWLHINGREWKEIRQVLIYAFIYQGVPSWDKTDGVVTLHVPEQPPIESRLTEGDNKRTLCAIARLVNENGSIRVERINQYFRGQEEMDRAFGWGFRWSRGSK
178597..179058                     PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: hypothetical protein; PNDMMAR_p132; phage(gi100004)     4.68e-08            KlebsiellapneumoniaeMRMSFFDKVKGALTSGREELTRQVSRYKNKKFMQGTVAVCARIAVASDGVSSEEKQKMIGFLRSSEELKVFDTAEVIEFFNKLVTSFDFDLEIGKGETMKYILALKDQPEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPAEFGL
179082..180122                     PHAGE_Cronob_vB_CsaP_GAP52_NC_019402: hypothetical protein; PNDMMAR_p133; phage(gi414087559)     2.52e-74            KlebsiellapneumoniaeMVSTHIGFPAETVTVFVALSVGAIFIDLFMHRHDKPISLKSAALWSVFWVVVAMAFAGFLYVHHGAEVASLFVTGYALEKVLSVDNLFVMMAIFSWFSVPDRYRHRVLYWGIIGAIVFRGIFVAIGTGLLSLGPYVELIFAVVVAWTAVMMLKGGGDDDEIEDYSQHLAYRLVKRFFPIWPKLSGHAFLLTQKEVDAELAKPENKDVSVGRLKKAALYATPLMLCVAVVELSDVMFAFDSVPAIIAVSREPLIVYSAMMFAILGLRTLYFVLEALKQYLSQLEKAVIVLLFFIAFKLGLNATDHIWHHGYSLSATTSLYVVLGVLALGILASVIFPEKPEAENKES
180161..180739                     PHAGE_Caulob_CcrColossus_NC_019406: putative TerD-like bacterial stress protein; PNDMMAR_p134; phage(gi414088275)     4.99e-44            KlebsiellapneumoniaeMSVSLSKGGNVSLSKTAPSMKNVLVGLGWDARSTDGQDFDLDASAFLLAANGKVRGDADFIFYNNLKSADGSVTHTGDNRTGEGDGDDESLKIKLDAVPGDVDKIIFVVTIHDAQARRQSFGQVSGAFIRLVNDDNQTEVARYDLTEDASTETAMLFGELYRHNGEWKFRAVGQGYAGGLASVCAQYGINAS
180826..181401                     PHAGE_Caulob_CcrColossus_NC_019406: putative TerD-like bacterial stress protein; PNDMMAR_p135; phage(gi414088275)     1.85e-40            KlebsiellapneumoniaeMAVSLVKGGNVSLTKEAPSMNVALVGLGWDARVTDGQAFDLDASVFLVGENGKVLSDSHFVFYNNTTSPDGAVQHQGDNRTGEGDGDDEQVKIDLTKVAADVKKLVFAVTIHEADSRKQNFGMVSNSFMRVVNNDNGSEIARFDLSEDASTETAMIFGELYRHGAEWKFKAVGQGFAGGLAALATQHGINI
181486..182727                     PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; PNDMMAR_p136; phage(gi100110)     3.00e-23            KlebsiellapneumoniaeMQLQSGQNIPLHTATLTLRLDYPPSPGFHSTPETCLFMLNAEGKVTGDADFIFYNNLSAAGGSVKLNPGHQHAVVHFALDQIPDTIQKIAITMVIDGSDTISGLAQLKLSAESQATFFVDLNGRTEKAVIMGEVYRYQGNWKLRALGQGFNGGLEPLAVSYGVDVEPAAEVVPQPARISLEKKLEGKAPALISLAKKASISLAKHKLDTVEARVAFVLDASGSMTGQFKKGHVQAVLDRIAVLSVQFDDDGTMDVWGFAERHKKYPDVTLDNLDGYIAAIQNTGKRSTWEILPGLGGTNNEPPVMNEVIDYFKDSTLPVFVVCITDGGISKTREIKEAIRRSANYPVFWKFVGLGGSNYGILERLDTFSDRRVDNSNFFSIDNFAHIKDEELYEKLLEEFKDWLGLAKKEGII
