gi|00000000|ref|NC_021235.1|  Lactobacillus fermentum F-6, complete genome. 2064620, gc%: 51.67%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1540800..1541645)       PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS07660; phage(gi971743567)           1.65e-27            LactobacillusfermentumF6MSQSGYKVSDLVKAAGVSRQAYYKWLTHEPTVHDIQDQEILKLVKQLEAQHKHCVGYDKMTRLIKQERLSYTVNKKRVMRIMKEHSIKADYRQPKRKRVQEQETYEAQNTLNRQFEQAAANQVWVTDTTEIAYNIRKYKVRLHVVLDLYGQYPLSWIITPTETSTGAIKVFQMAKQKAGGLAPLIHTDRGAAYTAKAFNHYLASNTSQHSYSAPGTPADNAVMEHWWADFKSIWLAHSPQPQTFEDLEQLVTEGIDYFTHSFISGKRNDLTAAEYRFGKAN
complement(1541642..1542256)       PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS07665; phage(gi971743568)           2.86e-37            LactobacillusfermentumF6MRTSSLNRWIKQFLTAGLAGLIRPEHNHRYTLQTKRSAVKAYLSGTLSGQAILNRYQIRSLSQLHQWIVRYNSGQLSVAYATRKRARKVGRKVTFEEKRQITQWTIDHEYNYQAAAEKFNVSYQRVYSWVRKYQRTHDWESLQDNRGRHKGKTPTNEVERLRQEVRQLKAKEKEREVHIAFAKKLVEIHNREVERPDDIKRFRK
complement(1542503..1543690)       PROPHAGE_Escher_CFT073: transposase; LBFF_RS07670; phage(gi26246249)                 1.70e-60            LactobacillusfermentumF6MNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGAYTRTIDTEYGEINLTIPRDRLNKYQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
complement(1544227..1544925)       hypothetical protein; LBFF_RS07675                                                   N/A                 LactobacillusfermentumF6MEKLNKQYLKQLSHYSWLTLIAIISILGVSAVFYLLAILFSGHIEVEAGSISIDGGNLVSMLAFLSDMMVLVLVFFSICTPYQIFKEAIANGVSRWTNWLAHHLMVITVLVVAWLMNALIELLQSGTVTWSQQWAIIISMLIGVTTAGALGNLYGLMSMRWKIILTIALLASFFVLCWLVVRLVLLVTPERAVMMIQSINHPIVWNGLGLIWVAMMVGIDYLCALHMQLRRD
complement(1544938..1545798)       PHAGE_Bacill_G_NC_023719: gp245; LBFF_RS07680; phage(gi593777701)                    2.31e-11            LactobacillusfermentumF6MTVNELMINHVTKRYRRHTVIDEVSFNLAPAKIYGLLGRNGAGKSTLLNIITNRIFPTSGMVAMGPQNVNNNDEELGKIYLMSESNMYPKTTRVKRMLADADRFYGKFDFANARRMLGQFGINEKARFSNLSTGQKTAVKITIALNVNAQYVLLDEPTLGLDVNYRETFYRELLRTYSEKPRTFVLSTHLISEVQQLVEDVLILHEGKIIVNEPVEELLGRAFLVSGPAQLVDEYTAGQTTTDSQTIGNLKETAVIGELDALRPIPDQVQIKHLDLQRAFTALTNH
complement(1545785..1546162)       PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; LBFF_RS07685; phage(gi410491962)     1.18e-07            LactobacillusfermentumF6MNFEFDQDSPLYQQIANQLAEMIFTGVYRAGDQVPSTTQLSASLNINPATVLKGMNQLVALGLLEKRRGRGMFVTPGAQEQLATKHRDDFYRNYVVAMVAEAKKLGIKEEHLQELIKRGYQDDGQ
complement(1546272..1547204)       PHAGE_Synech_ACG_2014f_NC_026927: long tail fiber distal subunit; LBFF_RS07690; phage(gi100279)     7.32e-36            LactobacillusfermentumF6MNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDIRDAATVSEVLATHKIGVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAQVRLVQVSTDEVYGSIVAGRVDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRKGVAGEVYNIGGFERRTVLEVVASLQALLGFPDSQVVHVAERLGHDHRYAVDDTKLRRALGWQPSTSLAAGLTKTVRALQH
complement(1547265..1548251)       PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; LBFF_RS07695; phage(gi30043988)     1.50e-13            LactobacillusfermentumF6MNKTNLSIIIPTYNNGKLVAKAIQSASTYGGTDLEILVVDDGSTDGSTNELQNIDPRVQVIHKENGGVSSARNLGLQKAQGEYVLFLDADDQLTPEWGQQMEHLKGQDLILFNYQTSKGEIRNINRQCLLSGDELEEYRCTMISNPTKNLTVWGKFLRRQVIEEHGLHFDENLSFAEDGDFMVAFLLEIQSLQLVPASFYRYLDSPSSVMRTFDGKKVAGYLDALSMTTKRFEHQHEDIQMAGVYYVLMHVNVMMVREVFDINNPASNRQKTQQLKRIIKEPVISSALAKVPLRACLKPRLVPIALLKLRLYCLARMIFTLRSKENHK

#### region 2 ####
complement(1640138..1642408)       PHAGE_Bacill_0305phi8_36_NC_009760: PcrA helicase; LBFF_RS08145; phage(gi156564011)     1.39e-164           LactobacillusfermentumF6MQNKSMLEGMNDKQSEAVLTTEGPLLVMAGAGSGKTRVLTHRIAYLIEERHVLPWHILAITFTNKAAREMKERVAKLLGEAGNDVWVSTFHALCVRILRRDIEQLGYNRAFTIADTSEQRTLIKRICEEQNIDTKKFEPRQLLSAISNAKNAMEDPATFAKNHQRPFDRMVARVYEAYQKELERNQTLDFDDLIMKTIELFKKAPETLTYYQNKFHYIHVDEYQDTNDAQYELVHMLAEKYENICVVGDADQSIYGWRGANMNNILNFEHDYPNAHSVMLEQNYRSTQTILKAANEVIANNLERKDKNLWTENGAGEKISYYRAQNEHDEAQFIVKKIQEERAKHNYQYQDFAILYRTNAQSRVIEETFLKSTVPYTMVGGHRFYDRMEIRDLLAYLTLIVNPLDSMSFERVVNTPKRGIGMTSVERLREFAQESNLPLLAAAQNVQNANAISARTRNKIEEFGQLIAALQDEAKVLSITDLTDQVLERTGYLAELQKDKTLQGQTRRENLEEFKSVTAEYDRQHEDDEGMDHLQKLTDFLAGLALVSDQDDVDEAEPAVTLMTLHAAKGLEFPVIFLIGMEEGVFPLSRAMTDNKELEEERRLAYVGITRAKKKLYITNAFSRMLYGHIQRNRPSEFVEEITPELMQSENQNQGERSLSGRIAGGNSYAFKAATATTYRRPSDAGKRVAPKTNTGTGAEKKSWNTGDKVNHKKWGQGTVVSVNGTGENMELDIAFPQQGVKRLLASFAPITKVED
complement(1642586..1643759)       phosphoribosylaminoimidazole carboxylase; LBFF_RS08150                               N/A                 LactobacillusfermentumF6MAGQNLLSQGKTLGIIGLTQKDWPLLVAAKKLGLNVGAYVDHSQPQLTKLADFTIVGNYRDRDKLTEFGQNSDLVIYASSLIAPVAINYLTNFTQVPQGVAALEIVQDRLMERAFLDEINVNVSPYVTVISLDDVYQSIDSIGYPAVLKPIQRGVGRTEPADQSPIRHCLWRLHSRWGLPTGILDPQYRVQSDGGHGRGNGDCLPAGRVFQRGPGANGHHPNRSSGCYARRNGPDRHRNCQEAGLPWCDHRSFLRNGCRSVVREFLPGANHLREHLRGGRGKPIRTNVAGDRGNGDPRTPPAAAGRVSATLRPISLRYAAGPKGKLEVPLLPGRHDDEGREGVSLGDWWPRRLAQRPVKSGHNRNLAAENVANATNTGRRIG
complement(1643761..1644348)       xanthine phosphoribosyltransferase; LBFF_RS08155                                     N/A                 LactobacillusfermentumF6MKELEEKIRQFGTVLPGNVLKVDAFLNHQVDPVLMQHIGQEFAARFKDAKITKVWTVESSGIAPAVMTGLALGVPVIFARKHKSLTLNSGMYTADVYSYTKKTTNRISISKCYVDKTDRVLLIDDFLANGQAVEGMLQIADQAGVEVVGAGIVIEKCFQPGSAELAAKGVRVESLAKVSSLADGQVSFKQTEGED
complement(1644364..1644978)       PHAGE_Clostr_phiCTC2B_NC_030951: prohead core protein protease; LBFF_RS08160; phage(gi100061)     1.77e-35            LactobacillusfermentumF6MAKRRRRTKKGAKKSPWLVAVLIILIGLMGSYVGYHLYQRHVQEQIIEKQQNAKKLFIKEIAPEAQAMQKQYHVMASITMAQAILESDWGTSELSAKYHNLFGIKGTGANSKLLSTKEYVNGQWVVIKGHFKVYSSWNDSIADHTKLMLNGTDTNQQNYQNVINATTYQQAAVALQDAGYATDPDYASKLINVIKSYNLHKYDE
complement(1645373..1646146)       PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; LBFF_RS08165; phage(gi971760361)     4.43e-07            LactobacillusfermentumF6MSKKVALVTGAGQGIGEAIAKRLAKDGFAVALVARHADALEKVKQEIEAEGGQALVVTADVAKRDEVFAAVEKTVAELGDFNVIVNNAGVAPTTPIDTVTPEDLDYVYSINVGGVIWGTQAAHAAFKKLGHPGKIINATSQAGVVGNPNLTVYSSSKFAIRGITQVTARELAEEGTTVNAFAPGIVKTPMMYDIAHKVGQNAGKDDEWGMQTFAKDIALKRLSEASDVANAVAFLAGPDSDYITGQTLEVDGGMQFH
complement(1646614..1647274)       PHAGE_Microc_Ma_LMM01_NC_008562: transposase; LBFF_RS10550; phage(gi117530202)       1.27e-14            LactobacillusfermentumF6MQLASDESFVKVSKATHGHVGIDLNTDNFLTDSEGNIVPNPRYYRTIKGKLAKEQRILSRRQQRAKKEHRSLRDSKNYQKQRLLVAKLHAKVMNQRHNFLQQISTALIKNHDLVVAKKLRQEFAKSCFGTYFRWLANISWHVGLSKALWASIYHNQPKKYYPNMSRLWLCNGHWDGQTNIRKLDLSLWYSPYSLERSKHSGNSTSLG
complement(1647483..1647860)       PHAGE_Lactob_Lb338_1_NC_012530: transposase; LBFF_RS10555; phage(gi226377679)        4.37e-05            LactobacillusfermentumF6MSKMKYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAINKELMQLRRVKLPIDIVQDRIKQLTMRQNAKQMSNHYQFLEDKRIDSLTKANAIQNYRKAWNAFRKVHANGRSPNFLQRSYHWA
1647943..1648137                   PHAGE_Lactob_CL1_NC_028888: transposase; LBFF_RS08175; phage(gi971752663)            3.72e-13            LactobacillusfermentumF6MTKEKIKDAIYTRRYIYNFHYHLIWVTKYRNQTFTTEVLANEMKAILQQVADDNDIVIEKMEVMP
1648223..1648915                   PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS08180; phage(gi971743568)           3.22e-28            LactobacillusfermentumF6MNRLELLYGYQKTESGLKVYADMHHVNQNTMTRWIRQFLLHGLAGVRHRSLNHRYLLNTKIEAVKEYQAGFPGEKIIEKYDIRSLSQLKQWSIQYNNDELKTKSRKRVRKMGRKVSFEEKCKIVQWVLDHDNDYQGATIQFNVSYQRVYSWVHKYHEAADSWEALKDNRGHRKPQKALEEMTEKERLEAEIKRLKKINREMELEIAFAKKLVEIRNRGVKRPDNIKRFKN
1649018..1649791                   PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS08185; phage(gi971743567)           5.16e-23            LactobacillusfermentumF6MRTRQFLEAIYQIEKRHQNCAGYKKVTAILNNENRKNQEIPEYTFSFDFRINIKRVRRIMRKHGIKADVRQKKRSRKKEQQQYQEDNLLERKFIQIAPNLVWVSDTTELTYGRNNKVRLHVVLDLYGRYVLSYHISPTETAEAAIEAFKRAAKQAGTFAPLIHTDRGAAYTSKDFNNYLTSNNSKHSLSAPGTPADNAVIEHYWGDFKYIWMTHHPHPQTLTELKDLVKQGVEYFNTVEISSKRNNLTAEDFRNEAV
complement(1649919..1651205)       PROPHAGE_Staphy_N315: transposase; LBFF_RS08190; phage(gi15927655)                   9.60e-61            LactobacillusfermentumF6MTDYIKNILQIKDPNLHFTDVVFENNDGWETQVFIGTVSLKLDRCPHCGFANTFIKNGHSYQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLESNVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDNDTSQIYQILPDRLKSSITHYFDRFSLKERKRVKSVSTDLNSYYQGLVRRYFPNAKLVVDRFHIVSMLTRAFNQVRVAVMKQFDPNTREYRALKNSWRLYLLKSTSLNYTKEYYDRHLRQKVTMAERVEIGLDLDPQLAAGYELLQGAMTALEEHDVDQLMDLLFTKWDVPAPFQTVLKTLRKNSEGVYNATVLPYSNGRVEGINRMIKLIQRTAYGFTNFGHFIARIRLHQMGTEAEKRRRQVQAPAAA
1651739..1652260                   PHAGE_Lactob_LfeInf_NC_029058: hypothetical protein; LBFF_RS08195; phage(gi985757313)     1.98e-103           LactobacillusfermentumF6MSKDKRLKQLQQKLTESVYGVDLDYGVGINGLIVIYQYRTDAHALEILEENNLLYGIGNESGFPFGRTMTGFRMQCQTTDYNAIADLVAKMVVKGVESTSKLKGASEYQKSIDQSLLIVSPDFVIPSEILKMYQNANSVSRITLKDAKNGVGRLVDIVQAHQMNLQYPQNYLE

#### region 3 ####
1978608..1978871                   PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS09790; phage(gi971743573)           1.11e-11            LactobacillusfermentumF6MKRYQDDFKASIVKMHREEKRSIRSLSEEYGFSPAAIHNWVKGAKSVELEDGTEVTSKEFKQLQKENQRLKEELEILKAAAVLLGKH
1978910..1979677                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LBFF_RS09795; phage(gi48697274)     1.73e-35            LactobacillusfermentumF6MRHRLSIILSALKLPCSTYYHWKRYQPSQHERVDNQLKEKIKLIWENNYRAYGYPRITMVLRKSGICVGSKRILRLMREMEIHSLMNRRFKKPGTHVDHSQRPNLIKHQPNARIWRADITYLELRPGTWVYLSSICEPKVHQVLAFKIGRQMEATLVVETINQALECHQKPQYFHSDMGSQYTSNEVETLLERHQISHSYSKQGYPYDNGPIEAFHSLLKREFAFQTTFSDFEDLVIRTSNYISWFNSDRIRTSV
1979802..1981481                   D-lactate dehydrogenase; LBFF_RS09800                                                N/A                 LactobacillusfermentumF6MDLVEELVNVVGKKNVITNKAKSLRFRKGYRSGKGDAVAIVFPTTLMAMWRVLNVLHDNNIIIIMQAANTSLTEGSVPAPGYDRSAVVVNGMKIKDLQLINNGEQVLAFPGTTLFHLENELRPLKREPHSVIGSSNLGASVIGGINNNSGGALIRRGPAYTELSLYVWIDEHDEMHLVNHLGIDLGKTPEEIITNLQNRNFDLNQVPPTEHHASMFHHEQVLRDVESDKPIRYNANPKELYEVSGSSGHVAALAVRLDTFPMDKKTQMFYIGTNNPDELEDIRRHIMTTFKELPVSGEYMHKNAYKLAKKYGKDSLIVIEKIGTGHLPQMFALKAWGERFLKHIPFFKPYFPDRLLQTLSNLFPNQMPKRLDDYYEKYDHYLQLKMAGNGIEEAREYLKSYFDKASGDYFEADANETSKAATHRYVTAGVAIRYQELKQDSIDILPLDIALASNDYKWFEHLPKEIEDKIEHKIYYGHLLDHVMHQDYILKPGVDAHELKKEMLKILDERHAVYPAEHNVGHLYLAAPALIKHYKKNDPTNSFNPGVGKQTMSKYWGEY
complement(1981536..1981880)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; LBFF_RS10610; phage(gi48697274)     4.30e-09            LactobacillusfermentumF6MKVFNQAAKASGTTPEMIHTDRGAAYTSTNYNEALRQEKVRHSLSAPGTPADNAVMEHWWADFKSIWLEHRPKAQTLAELQEQVRAGIMYFTNQFISAKRNDQTVAEYYHDLVG
complement(1981886..1982047)       PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS10615; phage(gi971743568)           2.60e-05            LactobacillusfermentumF6LKHNHDYKQAAKFDITYSRAYTWTQKYEQANDWTALKDRRGKARGRQPADREK
1982283..1982475                   farnesyl-diphosphate farnesyltransferase; LBFF_RS10620                               N/A                 LactobacillusfermentumF6LLQYLARLALSKYAETYVITNQILDRKGKVALELSINVYIKKSICDTPRKITITSKNLFKTHVA
1982515..1983561                   ABC transporter permease; LBFF_RS09810                                               N/A                 LactobacillusfermentumF6MFLAIKEMLHEKLRYSLIVALIFLVSYLLIILTGLATGLANLNKAAINEWDASSIVLNSDSEGRLQQSFLSQDEVASLPNNGTRISQYSTLVKSENGLKENTQLVGLDSKSFIFKKLKITSGSKNIRNNAGVVSDKFKSDGFKIGDHLLVANSSLRIKITGFTPRATLSALPVVYISPDTIQPLNKGVTNAVVFKNKLKNSKIPKGTNQLSISSFIKKLPGYSAQQLTFNFMIAFLYIIILIVISIFLYILTVQKLPNLGVLKAQGVSTQYLILSTLFQSFIISVIGVIIAIILGEITAITLPSEVPIVIDKSNIIVTGIGIIIMSLLGALIPIRQIAKVDPYKIIGG
1983566..1984237                   PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LBFF_RS09815; phage(gi371496158)     9.32e-40            LactobacillusfermentumF6MSNLIFESVTKVFGEGSSKYVALENINFKAESGQLILVVGPSGSGKTTFLTIAGGLQTPTEGNVKINDSTIKSLSKKQQTKLRLEKIGFVLQSYNLVPFLTVEEQFKLVDKLKKQNLTEQKMHELLSDLGLLELLKKYPNQLSGGQKQRVAIARALYTDPDYILADEPTAALDTDRSMKVIELLRDLAHKRNKIIIVVTHDLRLKNTADKVYQIIDGKMQMIN
complement(1984566..1984865)       PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; LBFF_RS09820; phage(gi100061)     3.35e-08            LactobacillusfermentumF6TGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIALAKQQGKYHGRKPQYAEDDPRLLHAFKLYQTGMSDVDVARNTGIKRTTFIRYRKKFDVH
1984928..1985626                   PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS09825; phage(gi971743568)           2.54e-29            LactobacillusfermentumF6MKITYSTTTKLRLLSQFQNVNESLKVFADYHNVGAGSLKRWIQQYLTGGLANLERPVHNRRYPKKLKLRAVRDYRNHRLPTKEILLKYDIRGLSQLRNWVILYNNGKEPVRKRVRKMGRKVSYDEKIEIVKWVLKHNHDYKQAAQKFDITYSRAYAWTQKYEQANDWTALKDRRGKTRGRQPADREKQLLKEIRDLKAKLREREVQIAFSKKMIEISNREVKRPNDIKRFKK
1985623..1986471                   PHAGE_Bacter_Diva_NC_028788: transposase; LBFF_RS09830; phage(gi971743567)           6.98e-26            LactobacillusfermentumF6MTSSGEYTVSETARTAGISRQAYYKWLNRRLSLREQQEREVLEEIKRIEKRHQDSVGYDKMVRLLNKEGRLSYRVGIKRVSRIMKINGIRADYRQPKKDRQGAKQTYQDENLLNRQFKQEKPNQVWVTDTTELTYGTANKVRLHAILDLYGQRLAAWLISPTETREAAIKVFNQAAKASGTTPEMIHTDRGAAYTSTNYNEALRQEKVRHSLSAPGTPADNAVMEHWWADFKSIWLEHRPKAQTLAELQEQVRAGIMYFTNQFISAKRNDQTVAEYYHDLVG
