gi|00000000|ref|NC_021654.1|  Klebsiella pneumoniae plasmid pKN-LS6, complete sequence. 245869, gc%: 52.81%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(79286..80674)           PHAGE_Erwini_vB_EamM_Asesino_NC_031107: chaperone for long tail fiber formation; D647_p30051; phage(gi100168)     4.27e-05            KlebsiellapneumoniaeMELMPFNFDRLPNGRVFISNLAGFHHFINEQELLDLSDEQISAEQSNPLESKLFITNESSSAIAPYALSSAFAKRLMNELAIRPIFMIVSTLRCDHTCKYCQVSRASVNASGYDLDPDLIPHIISTIKKLSIPPYKIEIQGGEPLLRFDLIQSIYEQCTETLGSSDFEMVIASSLSVLNEDMLQWSRGRNITFSVSLDGEEVVHNSNRILGHGLAYSRTVSGVEAIKRSLGAGRVATVTTVTKDLIRHPESIVQAHLSLGLKDMFIRPVSPYGFAQKASFTFSMEEYFSFYASLIDEILKMNNEGIRVVEHSASIHLKRIFNPGFSGYADLKSPSGVVLNSILFNYDGRVYGSDESRMLQKVNPETEFSAGEVKTLSFSKSPYYNAVLSSSFNFALPGCDTCAYQPFCGADPCQNISVQGEPVGDRSRSTFCQYHKGMFRYLMNCISEGGPKAEMLKGWAYV
80891..80908                       attL                                                                                 N/A                 GGTAATGACTCCAACTTA
complement(80906..81409)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; D647_p30052; phage(gi557307573)      1.15e-118           KlebsiellapneumoniaeMPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
81676..82335                       PHAGE_Stx2_vB_EcoP_24B_NC_027984: Cat; D647_p30053; phage(gi937456276)               3.11e-167           KlebsiellapneumoniaeMEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA
complement(82980..85946)           PROPHAGE_Xantho_33913: Tn5041 transposase; D647_p30054; phage(gi21231545)            8.67e-46            KlebsiellapneumoniaeMPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRREHLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALNAVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSGRDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA
complement(85949..86509)           PHAGE_Sodali_phiSG1_NC_007902: resolvase; D647_p30055; phage(gi89886020)             6.53e-33            KlebsiellapneumoniaeMTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ
complement(86635..87219)           tnpM modulator protein of Tn21; D647_p30056                                          N/A                 KlebsiellapneumoniaeMRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCSRLLKTTMEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVNQWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDACDSPPSG
complement(87188..88201)           PHAGE_Mycoba_Butters_NC_021061: integrase; D647_p30057; phage(gi479336499)           2.26e-12            KlebsiellapneumoniaeMKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
88346..88843                       PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; D647_p30058; phage(gi985761486)     1.16e-33            KlebsiellapneumoniaeMNSESVRIYLVAAMGANRVIGNGPNIPWKIPGEQKIFRRLTEGKVVVMGRKTFESIGKPLPNRHTLVISRQANYRATGCVVVSTLSHAIALASELGNELYVAGGAEIYTLALPHAHGVFLSEVHQTFEGDAFFPMLNETEFELVSTETIQAVIPYTHSVYARRNG
89078..89090                       attL                                                                                 N/A                 GCAAGCGCAAGCA
89251..90042                       aminoglycoside resistance protein, aadA2; D647_p30059                                N/A                 KlebsiellapneumoniaeMREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKPYSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEEFFDPVPEQDLFEALRETLKLWNSQPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPAQYQPVLLEAKQAYLGQKEDHLASRADHLEEFIRFVKGEIIKSVGK
90460..91386                       dihydropteroate synthase, sul1; D647_p30060                                          N/A                 KlebsiellapneumoniaeMGLCRYGAHNCCLFARPIPIVEVAAEADAMVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
91873..93078                       chromate ion transporter; D647_p30061                                                N/A                 KlebsiellapneumoniaeMTNNPTDDSRPWSVFLIFLRLGLTSFGGPIAHLGYFRAEFVTRRRWLSERSYADLVALCQFLPGPASSQVGIAVGLSRAGYSGALAAWAGFTLPSAIALILFALGISSYGDYVSQGALHGLKVVAVAVVAQAVWGMARNLCTDGLRVTIMAIATCVVLLVPSAWGQVGVIAIAGIAGRLLFKPAKVVEHDPLPITVSHRAGVLWLSLFFVLLIGLPVLAELMPSQTMAMVDSFYRVGSLVFGGGHVVLPLLQAEVVPSGWVNNESFLAGYGAAQAVPGPLFTFAAFLGASMNTAPSGWIGGIVCLLAIFAPSFLLVVGSMPFWERLRRNTGIQAALAGINAAVVGLLLAALYQPVWTSAIFQPQDFGLALVALVALMFWKLPPWLVVLGSGAAGWLLSVAL
complement(93546..94367)           putative transposase; D647_p30062                                                    N/A                 KlebsiellapneumoniaeMVVEHAHGLRQRRGPNAKSSLHKAHLAPDAGLQAPGASLSFAQGSHDFESLDRGIGRGDRFETAHRLDQYLELSVIGLDHVIEILHLPVGRLPVQLSFALQFGDRCTIARRFVGIERGRLFPVLQASQGLAQEPLRCLGAAGRRQVEIDRVAPLVDCPVQVGPLAPHLDVGFIQAPARIKATPPEPAQPLLHLRGVALDPAIDRRMVDRNAAFRQHFLKVAIADRIATIPAHRPQDHITLEMAPLEIRHRSVRPISAKHAQASRFLQQSPHEY
93591..94385                       PROPHAGE_Brucel_1330: transposase, putative; D647_p30063; phage(gi23502708)          4.49e-55            KlebsiellapneumoniaeMLGGDWTDGTMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
complement(94878..95462)           transcriptional regulator, TetR family; D647_p30064                                  N/A                 KlebsiellapneumoniaeMPRPKLKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMMERGVEQVRHYLNAIPIGAGPQGLWEFLQVLVRSMNTRNDFSVNYLISWYELQVPELRTLAIQRNRAVVEGIRKRLPPGAPAAAELLLHSVIAGATMQWAVDPDGELADHVLAQIAAILCLMFPEHDDFQLLQAHA
complement(95462..96700)           transporter, major facilitator family protein, mrx; D647_p30065                      N/A                 KlebsiellapneumoniaeMSERRYSPLATLFAATFLFRIGNAVAALALPWFVLSHTKSAAWAGATAASSVIATIIGAWVGGGLVDRFGRAPVALISGVVGGVAMASIPLLDAVGALSNTGLIACVVLGAAFDAPGMAAQDSELPKLGHVAGLSVERVSSLKAVIGNVAILGGPALGGAAIGLLGAAPTLGLTAFCSVLAGLLGAWVLPARAARTMTTTATLSMRAGVAFLWSEPLLRPLFGIVMIFVGIVGANGSVIMPALFVDAGRQVAELGLFSSMMGAGGLLGIAIHASVGARISAQNWLAVAFCGSAVGSLLLSQLPGVPVLMLLGALVGLLTGSVSPILNAAIYNRTPPELLGRVLGTVSAVMLSASPMVMLAAGAFVDLAGPLPGLVVSAVFAGLVALLSLRLQFATMAAAATASAPTHTEGEH
complement(96697..97602)           macrolide 2'-phosphotransferase I, mphA; D647_p30066                                 N/A                 KlebsiellapneumoniaeMTVVTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSGNEEYLAAAKAQLAAAE
complement(98440..99705)           PROPHAGE_Xantho_33913: Tn5041 transposase; D647_p30067; phage(gi21231545)            1.09e-37            KlebsiellapneumoniaeMGSCAAPSAKGDDKFITTDYLQQCQNNHVRPKDRKLLLTTILADGINLGLTKMAESCPGTTKSSLEGIQAWYIRDETYSAALAELVNAQKKSPLAAFWGDGTTSSSDGQNFRVGSHGRYAGQVNLKYGQDPSVQIYTHISDQYSPFYTKVISRVRDSTHVLDGLLYHETDLEITEHYTDTAGFTEHVFALMHLLGFAFAPRIRDLHDKRLFIHGKAELYQGLQSIISTTSLNLKEIETHWHEVLRLASSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERSLFMLDWFRDPLLRRRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAISLWNTVYIERAIDSLRRKGIPINEQLITHLSPLGWEHINLSGDYVWRTNLKLGQGKYRALRSVNSNMYKKQA
99684..100400                      PROPHAGE_Brucel_1330: transposase, putative; D647_p30068; phage(gi23502708)          2.64e-53            KlebsiellapneumoniaeMELHMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
105806..105818                     attR                                                                                 N/A                 GCAAGCGCAAGCA
108094..108111                     attR                                                                                 N/A                 GGTAATGACTCCAACTTA

#### region 2 ####
212719..215088                     PHAGE_Escher_phiV10_NC_007804: putative tail fiber; D647_p30141; phage(gi89152445)     4.55e-94            KlebsiellapneumoniaeMTVSTQVSRNEYTGNGATTQYDFTFRILDKSHLLVQTMDTSENIVTLTLGTDYTVTGVNRYNGGKVVLTSALPAGYKISIERSTPVTQEASIRNQGGFFPEIHEDALDKLTMLVQQAYGWWSGLSLRKPSWLANYYDALNNRIRNLRDPSQAQDAATKNYTDQKYESSISHSDTLFERTVRIPESRISTLPGVEIRKNKLIAFNDQGDPIVVLPESGSASDVLIQLASGSGLLYIGSTPTISTLQTIVPNIIGTRVQVKEFDYGYIVGGGTFIVQDAANFIADGGKVVTSGNSGLVFVRDEYYSSRIVRPEWYGCRGLGSSHPDTVPFAKMLSSLSDGDYVELRANAKYYNDFPANSQATNGWVITASNITMHGEDSTLSRATPLSASYSGFTTLKVTGNEFTLDGKLLITSDDPTNRPLYAYQSATKIDSREIFTSPLANTLSFWASGVDGLYIGSSVTLSNSVFPFFANNGCKNMKIFCTAKKSGQIYPQPTSASSDLALGSTFKLDACSDFIMDVIANDSAYAGIESESNNVNGSVTLVTNKAYHAGLHLWNRCKNITYKVSATDIVEGGGVITGYGCEACSGYVTAYNAQYIVAYIGNSATTPVISCDAKGSGFNVTDGVVFFATAANNAYIQHCNVDVTVVHADVFSIGTGRQSAVKFNGGQYCDIKVNAKDFDYIFSLGMGANNKFNVAYNKFNTAFSYSDQRSFDNEYKYTDPGGNVYHLQAKASSHEYRSDAVTNPVLGFKPLLRKQINSDGFVNANLPITTTSVGGFYYDPDTKYVRVNL
216059..216688                     PHAGE_Salmon_epsilon15_NC_004775: endolysin; D647_p30142; phage(gi30387404)          9.99e-118           KlebsiellapneumoniaeMDINEFQKAAGVSLALATRWHPHIVAAMKEFGIIKPLDQAMFIAQAGHESTGFTQLVESFNYSVAGLAGFVRAGRLTQGQANSLGRRQGEPSLPLERQRAIANLVYSKRMGNNGPTDGWFYRGRGLIQTTGLNNYRDCGAALKVDMVKQPELLAQDDYAARSAAWYFVKYGCLKYTDDLMRVTQIINGGQNGIDDRRVRYLSAKKVLAS
216685..217167                     PHAGE_Salmon_epsilon15_NC_004775: putative Rz-like protein; D647_p30143; phage(gi30387405)     1.61e-97            KlebsiellapneumoniaeMITAFVKAYWKQLLIVSMLAALVAGGVVAWNIHGDRQYDAGYAQAKADRKAEDEKARKHDEQEKATNEREAQQRIDQARNDALDAAARAGRLQQQLVAIREQLRQYNATVGAGSSAADTGVLLADVLEKSLERNRQLAEYADRAAEAGRVCERQYDKLTR
217727..218719                     PHAGE_Entero_If1_NC_001954: hypothetical protein; D647_p30144; phage(gi9630756)      3.39e-156           KlebsiellapneumoniaeMAKRHAITAVAAVAQRSGARLQEFLPEACSIPSFQETRPKRCPQGVKLDQTNNRISLPKLGWIRYRNSREVIGEVKNVTVIQSCGKWYVSIQTEYEVPEQVHKAASMVGLDAGVTKLATLSDGTVYQPVNSFKASQRKLAMLQRQLSRKVKFSASWQKQKKKIQRLHSHIANIRRDYLHKVTSEISKNHAMIVIEDLKVSNMSKSAKGTAERPGRNIRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAIPPAYTSQRCACCGHTAKENRQTQSKFVCQVCGYTENADINGARNILAAGHAVLACGGMIQSGRPLKQEPTEASQAPV
complement(219036..220307)         PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; D647_p30145; phage(gi431811050)     0.0                 KlebsiellapneumoniaeMFALADVNSFYASCEKVFRPDLRGKPVVVLSNNDGCVIARSAEAKLLGIKMGTPWFQLKEAQFPEKLYVFSSNYELYASLSNRVVALLEELSPRVEQYSIDECFLDARGIGHCMDLEDFGRQLRGHVLSGTGLTIGVGFGATKTLAKSAQWASKEWPQFRGVLALSPENPRRTAKLLSLQPVEEIWGVGNRIAKKLHVMGITTALQLSLTNPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGQRITTYEEMRQAVCQYAERASEKLRGERQYCRHISTFIKTSPFAVNEPYYGNVATEKLNTPTRDTRDIIAAAVRSLDRIWLDGHRYAKAGIMLNDFSPNGVAQLNLFDDVQPRPHSDALMKVLDGINHSGLGKVWFAGRGIAPDWQMKREMLSPAYTTRWKELPVARF
complement(220307..220732)         PHAGE_Cronob_ENT39118_NC_019934: protein umuD; D647_p30146; phage(gi431811072)       6.78e-32            KlebsiellapneumoniaeMKFIPAVSEASIVKIPLFTERCPAGFPSPASDYTESELDLNEYCIHRRHSTYFVRAIGNSMTDIGLYSGDLLVVDKAEQPRHGDIVIAEIEGEFTVKRLLLTPRPALQAMNPDFPSLYPDPETLQIFGVVTAFIHKTRRAD
221138..222622                     PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; D647_p30147; phage(gi100001)      1.95e-36            KlebsiellapneumoniaeMYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANKLAAAWLPRVRVLHPWPVERFTARHPRQEPGA
