gi|00000000|ref|JMSW01000002.1|  Klebsiella pneumoniae VAKPC278 plasmid pVAKPC278-138, complete 137733, gc%: 54.41%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
17042..17053                       attL                                                                                 N/A                 GGAAGGTGCGAA
complement(21098..24064)           PROPHAGE_Xantho_33913: Tn5041 transposase; Y976_25875; phage(gi21231545)             8.67e-46            KlebsiellapneumoniaeVAKPC278MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRREHLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALNAVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSGRDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA
complement(24067..24627)           PHAGE_Sodali_phiSG1_NC_007902: resolvase; Y976_25880; phage(gi89886020)              6.53e-33            KlebsiellapneumoniaeVAKPC278MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ
complement(24753..25031)           transposase; Y976_25885                                                              N/A                 KlebsiellapneumoniaeVAKPC278MQGFLFARPMPAAAFVGFVNQWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDACDSPPSG
25109..25121                       attL                                                                                 N/A                 TTTTCAGAAGACG
complement(25306..26319)           PHAGE_Mycoba_Butters_NC_021061: integrase; Y976_25890; phage(gi479336499)            2.05e-12            KlebsiellapneumoniaeVAKPC278MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
26464..26961                       PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; Y976_25895; phage(gi985761486)     1.16e-33            KlebsiellapneumoniaeVAKPC278MNSESVRIYLVAAMGANRVIGNGPNIPWKIPGEQKIFRRLTEGKVVVMGRKTFESIGKPLPNRHTLVISRQANYRATGCVVVSTLSHAIALASELGNELYVAGGAEIYTLALPHAHGVFLSEVHQTFEGDAFFPMLNETEFELVSTETIQAVIPYTHSVYARRNG
27369..28160                       adenylyltransferase; Y976_25900                                                      N/A                 KlebsiellapneumoniaeVAKPC278MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKPYSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEEFFDPVPEQDLFEALRETLKLWNSQPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPAQYQPVLLEAKQAYLGQKEDHLASRADHLEEFIRFVKGEIIKSVGK
28324..28671                       PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; Y976_25905; phage(gi311992758)     9.11e-09            KlebsiellapneumoniaeVAKPC278MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
28665..29504                       dihydropteroate synthase; Y976_25910                                                 N/A                 KlebsiellapneumoniaeVAKPC278MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
29632..29835                       hypothetical protein; Y976_25915                                                     N/A                 KlebsiellapneumoniaeVAKPC278MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLGIASENGK
29991..31196                       chromate transporter; Y976_25920                                                     N/A                 KlebsiellapneumoniaeVAKPC278MTNNPTDDSRPWSVFLIFLRLGLTSFGGPIAHLGYFRAEFVTRRRWLSERSYADLVALCQFLPGPASSQVGIAVGLSRAGYSGALAAWAGFTLPSAIALILFALGISSYGDYVSQGALHGLKVVAVAVVAQAVWGMARNLCTDGLRVTIMAIATCVVLLVPSAWGQVGVIAIAGIAGRLLFKPAKVVEHDPLPITVSHRAGVLWLSLFFVLLIGLPVLAELMPSQTMAMVDSFYRVGSLVFGGGHVVLPLLQAEVVPSGWVNNESFLAGYGAAQAVPGPLFTFAAFLGASMNTAPSGWIGGIVCLLAIFAPSFLLVVGSMPFWERLRRNTGIQAALAGINAAVVGLLLAALYQPVWTSAIFQPQDFGLALVALVALMFWKLPPWLVVLGSGAAGWLLSVAL
31207..31512                       PadR family transcriptional regulator; Y976_25925                                    N/A                 KlebsiellapneumoniaeVAKPC278MTDKDLYGGLIRLHILHHAAEEPVFGLGIIEELRRHGYEMSAGTVYPMLHGLEKKGYLTSRHERTGRRERRVYDITEQGRTALADAKTKVKELFGELVEGG
31560..31572                       attR                                                                                 N/A                 TTTTCAGAAGACG
31739..32503                       PROPHAGE_Brucel_1330: transposase, putative; Y976_25930; phage(gi23502708)           3.18e-55            KlebsiellapneumoniaeVAKPC278MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
44841..44852                       attR                                                                                 N/A                 GGAAGGTGCGAA

#### region 2 ####
27364..27384                       attL                                                                                 N/A                 ACATCATGAGGGAAGCGGTGA
32945..32957                       attL                                                                                 N/A                 TCGACGACGGTCG
complement(35842..36546)           PROPHAGE_Brucel_1330: transposase, putative; Y976_25955; phage(gi23502708)           2.00e-52            KlebsiellapneumoniaeVAKPC278MNPFKGRHFQRDIIRWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
36537..37802                       PROPHAGE_Xantho_33913: Tn5041 transposase; Y976_25960; phage(gi21231545)             1.09e-37            KlebsiellapneumoniaeVAKPC278MGSCAAPSAKGDDKFITTDYLQQCQNNHVRPKDRKLLLTTILADGINLGLTKMAESCPGTTKSSLEGIQAWYIRDETYSAALAELVNAQKKSPLAAFWGDGTTSSSDGQNFRVGSHGRYAGQVNLKYGQDPSVQIYTHISDQYSPFYTKVISRVRDSTHVLDGLLYHETDLEITEHYTDTAGFTEHVFALMHLLGFAFAPRIRDLHDKRLFIHGKAELYQGLQSIISTTSLNLKEIETHWHEVLRLASSIKQGTVTASLMMKKLASYPKQNGLAKALREIGRIERSLFMLDWFRDPLLRRRVQAGLNKGEARNALARAVFMHRLGEIRDRGLENQSYRASGLTLLTAAISLWNTVYIERAIDSLRRKGIPINEQLITHLSPLGWEHINLSGDYVWRTNLKLGQGKYRALRSVNSNMYKKQA
37913..38518                       PROPHAGE_Brucel_1330: transposase, putative; Y976_25965; phage(gi23502708)           8.09e-39            KlebsiellapneumoniaeVAKPC278MLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
complement(38712..39032)           PROPHAGE_Xantho_33913: IS1479 transposase; Y976_25970; phage(gi21229605)             2.16e-36            KlebsiellapneumoniaeVAKPC278MKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLNLERIPDETTICWR
39374..40201                       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; Y976_25975; phage(gi371496158)       1.94e-26            KlebsiellapneumoniaeVAKPC278MMPHPIQDAVLRVDRLSVVYPGGVTALRDTSIAFRRGEFTVLLGLSGAGKSTLLRSLNRLVTPTGGSVTSELGELGSGSALRQHRRRTAMIFQHHQLIERQSALANVLTGRLAFHNTLRSLFPLPRADQEIALSCLARVGLADKALSRVDKLSGGQQQRVGIARALAQQPAIILADEPVASLDPATSVRVLGLLRDICKEDGITAIVSLHQLEYARRFADRVVGLADSQIVFDAAPSELTDAQLERIYAGRSTTQPANTPAEPPVMLEPSLEMSR
40198..41061                       phosphate ABC transporter substrate-binding protein; Y976_25980                      N/A                 KlebsiellapneumoniaeVAKPC278MKRLSALLLTCLLSAVSSLSALAADADPDVLKVALLPDENASELIKRNQPLKDYLEEHLDKKVQLIVTTDYSSMIEAMRFGRIDLAYFGPLSYVMAKSKSDIEPFAVTVIDGKPTYRSVIIANVASGVNEYADLKGKKMAYGDRASTSSHLIPKTVLLETAGLTGGRDYEEYFVGTHDAVAVNVANGNADAGGLSEVIFNHVVERGLIDPSKVKVLGYSGEYPQYPWAMRSNLSPELKTKVRDVFVGIDDPEVLRNFKAEAFAPITDADYDVIRKMGSLLGLDFATM
41070..41897                       phosphate ABC transporter permease; Y976_25985                                       N/A                 KlebsiellapneumoniaeVAKPC278MSTHYDVQALPAEQREHILRGFGLGWWRQLGQVAIVFGVVLLACWYVGLLDATTLLNGLPSIATLAGEAMPPDFSGYRSWIRPLIDTLAMSIAGTAIAVVFSLVVAFVAARNTAPHPLVFGVARVLLNALRSVPELIMGIIFVAAVGFGALPGVLALGLHSVGMVSKFFAEAIEHVDEAPVEAARAAGATPMQVLLHAVLPQVTPQFADVAIYRWEYNFRASTVMGMVGAGGIGFELMGSLRIMQYQEVAAILLVILAMVTLVDAFSGVLRKRFK
41906..42916                       2-hydroxyacid dehydrogenase; Y976_25990                                              N/A                 KlebsiellapneumoniaeVAKPC278MLPKLVITHRVHDEILQLLAPHCELVTNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVVGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGEFQGWQPQFYGTGLDNATVGILGMGAIGLAMAERLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTQHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPRLIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNIIQVLAGARPINAANRLPKAEPAAC
42910..43779                       LysR family transcriptional regulator; Y976_25995                                    N/A                 KlebsiellapneumoniaeVAKPC278MLNPVWLKSLVAIVQTGSFQSAARALGLAQPTVSQHLQKLEEQVGVTLVQRSRSGCQPTTRALAFMPHATALLDMHARALEALHGNRERVGASTNIGTYLLQPFVRNYLTTANERGEVDLRIAANPDVADQLLAGQLDAAIMEWWLPHPDFEHRLWRVEPLVLIVSPDHALAEAGCIERDRLVDLPMLGGEPGSGTGRLLTEYFGELGVPRSGMQLGSTEAVKQAVRAGLGVSLVMASAVQDEVRSGALVALPIPGLEKRLQLIWRKPPGNLHPPGFVRHLLEEADLAG
43887..44522                       PROPHAGE_Xantho_33913: IS1479 transposase; Y976_26000; phage(gi21229605)             6.68e-45            KlebsiellapneumoniaeVAKPC278MKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFAGLNLERIPDETTILNFRRLLEKHELAAGILAVINGSGRPRPVAAPGHHRRCNADQCAQFDQEQGRQARPGNAPDQEGKPVLFRQCDLKVAWVSVPQVNARRNRLFHHSFPTQTGVAGNSRV
complement(44988..45968)           PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; Y976_26005; phage(gi971482498)     0.0                 KlebsiellapneumoniaeVAKPC278MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
complement(46227..46730)           PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; Y976_26010; phage(gi557307573)       1.61e-114           KlebsiellapneumoniaeVAKPC278MPGNRPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLSTLERLLGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
complement(47170..47433)           PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; Y976_26015; phage(gi157166064)     5.39e-06            KlebsiellapneumoniaeVAKPC278MRPQRRTYSKSFKAQVIQECSEPGASIANIALGYSLNANLDHKWIRLPTQKTTAIQPAFIPLPSQMLGVGSHTQARCCDHEFDPVGP
47448..47711                       phospholipase D; Y976_26020                                                          N/A                 KlebsiellapneumoniaeVAKPC278MGHGLRRRCREGVLAGRILLNYVVWGNGSVSARLWNAIRSDDWAIPHVSLSSLGEIVVWARPDEFPPRNMQTSKGLRALGYNVRIGV
47955..48236                       PHAGE_Bacill_SPP1_NC_004166: hypothetical protein; Y976_26025; phage(gi22855124)     1.91e-06            KlebsiellapneumoniaeVAKPC278MKAHLQVIFTLDELAAYLKVGKRTLYRLAAHGEIPAFKVGGTWRFPQSEIDQWINDQTRAAAKKEVMRKREQQKSSEQPVSPGRTARHSRQRA
48271..48840                       PHAGE_Cyanop_P_RSM1_NC_021071: heat shock protein; Y976_26030; phage(gi481019345)     7.81e-08            KlebsiellapneumoniaeVAKPC278MDIDFKKLAPWNWFKNEQQEQQTVSSLPVQRNDLPAASGPVSPILQLHREIDRLFDDAFRGFGFPALNMPQWPSDWSGMLKPALDIQETDKQYKIALEVPGVEEKDIQITLDNDVLMVRGEKRQEQEKKEGGFHRVERSYGSFQRALNLPDDANQDSIKASFKNGVLTVTIDKREVSAPKQGRSIPING
51170..51182                       attR                                                                                 N/A                 TCGACGACGGTCG
51750..51947                       phospholipase; Y976_26040                                                            N/A                 KlebsiellapneumoniaeVAKPC278MAGEAAVSDPIGLALAWAASLASIAVAVVAAGHAGVYKRDEQSATPWGLLISGGTALPLAGHPFA
52446..52934                       diguanylate cyclase; Y976_26045                                                      N/A                 KlebsiellapneumoniaeVAKPC278MKEKQADPIKTFRAQWAVMTFYERFEQVIALALSAIIAVIIVVSLLQLISIVFSLLIIDAFNPLDHKVFQTVFGMIMTLLIAMEFKHSIVRVALRRDSIIQVKTVILIGLIALARKFVILDPETGPAKVAALAGATLALGATYWLLRERDDRTAGESSDDQS
52921..53883                       Zn-dependent protease; Y976_26050                                                    N/A                 KlebsiellapneumoniaeVAKPC278MISRDLRHAQNVGARHRWHNRLQTVLLVLTLLGIAAVAGSLLLGDGGLWLALAAAGFTLLLEPAAASGLTLRLYGARPLHPDEAPDLWAVLRELAARAGLPTVPVPHYVPSGVVNAFATGSKHHAAIALTDGLLRSLTPRELTGVLGHEIAHIANEDLRVMGLADSISRLTHLLALLGQLAIVLSLPTLLLGVTEVNWPALLLLAVAPQLALLAQLGLSRVREFDADRLAAELTGDPHGLASALAKIERVSRSWRAWLLPGWGNPEPSWLRTHPATAERIERLLELAPPPAMPPFPSARFDPEVTVSPRPPRWRTGGLWR
54198..54503                       transposase; Y976_26055                                                              N/A                 KlebsiellapneumoniaeVAKPC278MRKRKSAPQDKNQDALLGEIQRLRKQVHQLQLERDILTKANELIKKDLGVSFLKLKNREKTLIVDALKKKYPVAELLSVLQLARSCYFYQNVCTISMRKYA
54500..55225                       PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; Y976_26060; phage(gi17546155)     2.74e-59            KlebsiellapneumoniaeVAKPC278MIMADIFEENYRCYDYRRLHAMLRGNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGLVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
68174..68194                       attR                                                                                 N/A                 ACATCATGAGGGAAGCGGTGA
