gi|00000000|ref|CP008842.1|  Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete 204468, gc%: 52.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(92081..93055)           PHAGE_Entero_P88_NC_026014: recombinase; HR38_28190; phage(gi744692717)              1.81e-75            KlebsiellamichiganensisMMNIYCDDGSTNVKLAWFEGDGLQIRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAPDRIEVIGDPQMALAREIALYNKED
93271..93714                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; HR38_28195; phage(gi431811072)        5.02e-34            KlebsiellamichiganensisMRRKDETTAFSTGKELPPQAHPLFADLACCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASVQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDDLDIFGVVTHIIHRTREMY
93714..94982                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; HR38_28200; phage(gi431811050)      0.0                 KlebsiellamichiganensisMFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSIEAKSWIKMGTPWFQIKKERYPEKIYAFSSNYELYASMSARVMNCLEELAPRVEQYSIDEMFLDLTGVEHCMELEDFGRQLRQHVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFRGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPTFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFGVKITEYESLRQAICQHAERASEKLRKERQYCRHISVFIKTSPFAVKEPYYGNVATEKLFTPTQDTRDVIAAAISALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMKVLDGINNSGLGKVWFAGRGITPEWQMKREMLSPAYTTRWKELPVARF
94997..95008                       attL                                                                                 N/A                 CCGGGCCTGGCT
95147..95398                       antitoxin; HR38_28205                                                                N/A                 KlebsiellamichiganensisMPNIILSDTSASISELKKNPMATVSAGDGFPVAILNRNQPAFYCIPAELYEKMLDALDDQELAKLVSERSNQQLLDVDLDTYL
95395..95682                       PHAGE_Mycoba_Xeno_NC_031243: hypothetical protein; HR38_28210; phage(gi100026)       6.98e-07            KlebsiellamichiganensisMTYTVKFREDALKEWQKLDKAIQQQFAKKLKKCCDEPHIPSAKLRGIKDCYKIKLRASGFRLVYQVIDDQLIIAVVAVGKRERSDVYNLASERMR
96733..97050                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; HR38_28215; phage(gi431811050)      2.68e-22            KlebsiellamichiganensisMFVYNKIVGLLDECSAEKLSTPKSNTWDIIAVSVNLLDWVWMTDHRYAKVGVLLNDFSPNGVSQLNLSDEVQPRAHSGELMKVLDGINHSGKGKIRFADRGIASE
complement(97848..98819)           PHAGE_Yersin_PY54_NC_005069: partitioning protein SpyB; HR38_28220; phage(gi33770536)     4.20e-115           KlebsiellamichiganensisMKRAPVIPKHTVNTPATETPSSAVPAAPMVDSLIARVGAMARGNSIVLPVCGQEVRFSLEVIPGDSVESHSRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSGIIEVADGSRRRKAAILTSSDYRILVGDLDDEQMTALSRLGNDYRPTSAYERGHRYASRLQNEFAGNVSALADAEHISRKIITRCINTARLPKSVVALFSHPGELSARAGEALFKAFADKEELLKQQTKELHEQKKAGVIFEAEEVITLLTAVLKKTPAARVNQSSRHRYVPGASALYKGDKVILSLDRSRLPSECIEKIEAILKELEAKAG
complement(98819..99985)           PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; HR38_28225; phage(gi46402111)     0.0                 KlebsiellamichiganensisMGLMDTLNQCITAGHEMTKAIAVAQFNDDSPEARKITRRWRIGEAADLIGVSSQAIRDAEKAGRLPHPDLETRGRVEQRVGYTIEQINHMRDVFGTRLRRSEDAFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDVIYAVKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLKNVDLKGFEPDVRILLTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
100804..101814                     PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; HR38_28230; phage(gi410491479)     3.25e-114           KlebsiellamichiganensisMASENNKLPLNLQEVDKSTGEVVNLDVNSTSTVQPVALMRLGLFVPTLKSTGKSKANRKNVTDATEELVQLSIAKSEGYTDIKITGSRLDMDTDFKVWLGIIRSMSEYGVKKDSLELSFVEFVKMCGFDSRRSNKKMRDRISNSLFKLASVTLKFQSETKGWTTHLVQSAYYDINEDIIEIKAEPKLFELYHMDRRVLLRLKAIDALQRKESAQALYTYIESLPQNPVPISMKRMRDRLNLTSNVYTQNHTVRKAMEQLKDIGYLDYTEFKRGRSTYFSVHYRNPKLISSSGKAVPRDEDEKKPEQNYDEVIKALKAAGIDPQKLAEALTNMKPEN
complement(102123..102863)         recombinase; HR38_28235                                                              N/A                 KlebsiellamichiganensisMNNIIPLQNSPERVSLLPIAPGVDFATAVALRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATMWNTGIRIGEARMLTPESFDFDGLRPFVRVLSEKVRARRGRPPKDEVRLVPLTDGNFVRQMESWMVTTRPRRREPLWAVTDETMRNWLKQAVKRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPKKVIQALAGHKDPRSMEVYTRVFALELAATLAVPFTGDGRDAAAVLRSLPPAT
104638..105663                     DDE endonuclease; HR38_28245                                                         N/A                 KlebsiellamichiganensisMKIFITDQQKAELERLHDSSRDKRVCDRIKAILLASEGWSSAMIAQALRLHQTTVDHHISEFLNKGKLKPENGGSDSKLSAEQTAFLISHLSDNLFYHTRDIVAFVARTWNIVFSIPGMNKWLHRNGFTYKKPSGVPHKFSEEKQKQFIEYYEELKATAGDEPVLFIDAVHPTQATKIGYGWIRKGQRKAVKTTGSRTRLNIMGALNLKAPEHPLICEYKTVNEYNVSRFFNEIRKIYPDYQQKVHVILDGAGYHRSQLVKDWAEVVNIKLHYLPPYSPNLNPIERMWKLMNEHARNNRYFSNSREFRDAISEFFSHTLPGIAGFLTSRINDHFQVLKPAS
complement(105829..106710)         PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; HR38_28250; phage(gi26249446)     6.08e-130           KlebsiellamichiganensisMDSARALVAKGRGIAMVSRTMGVSRAQLSLRINRSADWQDRRCNRRNEEADAEILSAILNIISDMPSYGYRRVWGILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHHKPERPKREHKGKIAVAESDMRWCSDGFEFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQWLTDNGSAYTAYETRRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVRTALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT
complement(106668..107063)         PROPHAGE_Escher_CFT073: transposase insC; HR38_28255; phage(gi26251004)              4.90e-56            KlebsiellamichiganensisMSNTNANFEMTGILLGQEVRKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWKKQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWIAHAPLLPKDGE
complement(107112..107468)         hypothetical protein; HR38_28260                                                     N/A                 KlebsiellamichiganensisMQKKTNDQIILEHILKDKKSEFDIEINEAEHFEIYSASEILKDYDITYDDIMYSIVGNGGDGGFDSIFTFVNGELQKEDTELNTQIRKNHIELVVIQSKTSPTFKEDAIIKFRDDVAP
108634..108645                     attR                                                                                 N/A                 CCGGGCCTGGCT
complement(108740..109483)         PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; HR38_28270; phage(gi764159894)     8.58e-07            KlebsiellamichiganensisMPSQLPIAVDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEVLALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRAPAGSQAHRLVPLSDHQYVSQLQMMVATLKIPLERRNKRTGRTEKARIWEITDRTVRTWLNEAVETAAADGVSFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSVSSTEVYTKVFALDVAARHRVQFQMPGPDAVAMLKGNI

#### region 2 ####
159265..159969                     PROPHAGE_Brucel_1330: transposase, putative; HR38_28540; phage(gi23502708)           1.98e-53            KlebsiellamichiganensisMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
160201..160212                     attL                                                                                 N/A                 AACTGGCTGAAT
160973..161239                     hypothetical protein; HR38_28545                                                     N/A                 KlebsiellamichiganensisMKSDVQLNLRAKESQRALIDAAAEILHKSRTDFILEMACKAAENVILDRRVFNFNDEQYAEFIDMLDAPVEDEPAINKLLARKPQWDV
161227..161709                     PHAGE_Lister_vB_LmoS_293_NC_028929: hypothetical protein; HR38_28550; phage(gi971756903)     2.21e-05            KlebsiellamichiganensisMGRITTPEPLSSSHQLAEFVSGETVLDEWLKQRGLKNQALGAARTFVVCKTGTKQVAGFYSLATGSVNHTEATGSLRRNMPDPIPVIILARLAVDVSLHGKGVGADLLHDAVLRCYRVAENIGVRAIMVHALTEEAKGFYAHHGFKASQTHERTLFLKLP
complement(162455..162814)         hypothetical protein; HR38_28565                                                     N/A                 KlebsiellamichiganensisMQVFGIFCWSGKTTIEVNNEGIQPGIGILDAADAFKPHFFDKSILKSLVCALNATFSLRAVGAYQLDPQFGKHPAELSDSSCGSATIIDPENAVLIAVERQWFAMLFKIRAGGHHVIKG
162916..164415                     integrase; HR38_28570                                                                N/A                 KlebsiellamichiganensisMTLNTSQVSYYMTQRKKGATQHISAMKAGISVRSGRRIEKDQWSKAGERHWRTRKDPLEAVWDSELVPLLKERPALMPTTLLEMLQDKYPGQYPNNLRRTMQRRVREWKLQYGAEQEVMFRQRHQPGLRGLSDFTELKGVVVTIAGKLLAHKLYHFRLEWSHWSWMRVVLGGESFSALAEGLQEALGQLGGVPSEHKTDSLRAAWKHRGEDGQRELTERYAELCRHYGMQGVHNNAGRGHENGSVESAHGHLKRRIRQALILRGSNDFSTLEEYQAFITQQVMRHNRNNQDLVKEEQPHLKPLPLRRSADYDELTVRVSSSSTINVRHVIYSVPSRLVGQLLRVRLWDDRLSCYVGSNEVMNCPRVRPEKGKTRARRIDFRHVIDSLAKKPGAFCHATLRNDILPDDEWRKLWRRLCNHLEPEMAGRLMVHALKLAAGYDDISVVARGMEQMLNTPGELDLNRLMRFLGIKEKELPPVSVVQHNLSSYEQLLRGKGGLQ
164412..165167                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; HR38_28575; phage(gi557307613)     1.45e-40            KlebsiellamichiganensisMSNIHHLERSLRKLRLTRVGAEWHALEKRALAEGWTPSRYLLTLCNEELLWRESEKLRRYKKEARLPVAKTLGEYDFAQVPELNAAQFRQLCETTDWVDAGENVLLFGASGLGKSHLAAAIVDGVVGQGYRARFYSAGELLQELRKARAQLKLNELLLKLDRYRVIVVDDLGYVKRDNAETGVLFELIAHRYERGSLVITSNHPFSTWGSIFVDETMAVAAADRLIHHGYMFELKGESYRKKTAKAVTSAT
165327..165683                     hypothetical protein; HR38_28580                                                     N/A                 KlebsiellamichiganensisMIYLVEPTEENTRIAGEKITVYDYPNGTLAFKYGYRSLNYQVFDKLECIDQGQIVDNKRLGAVLKLAQDKMDELDREGKRDRSKKMPKRRAQARVQEQLRAINPVLANPEEFRASLKR
166084..166095                     attR                                                                                 N/A                 AACTGGCTGAAT
complement(166184..166909)         PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; HR38_28590; phage(gi17546155)     3.13e-61            KlebsiellamichiganensisMIMADIFEENYRCYGYRRLHAMLRSNNRVISEKVVRRLMAEEQLVVKRTRRRRYNSYCGEIGPAPENLLARDFSSCRPNEKWLTDITEFQLPAGKVYLSPVIDCFDGQVVSWSIGTRPDATLVNTMLDDALDTLNEHDKPVIHSDRGGHYRWPGWLERINTSGLIRSMSRKGCSSDNAACEGFFGRIKNEMFYGRDWAGITLEKFICFLDRYIRWYNEKRIKLSLGAMSPVKYRQHLGITT
167052..168032                     PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; HR38_28595; phage(gi971482498)     0.0                 KlebsiellamichiganensisMSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
