gi|00000000|ref|KJ605395.1|  Rhodococcus sp. NS1 plasmid pNSL1, partial sequence. 515592, gc%: 64.01%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1634..3250)             PHAGE_Microc_MaMV_DC_NC_029002: pentapeptide repeats family protein; LRS1606.3; phage(gi971764755)     3.35e-17            RhodococcusspNS1MGCSGRASRADRPASVRRATIGGVDRCGSGALDAASAGWSVGGIVVDRKGEWDRVSQPDSTAGGATGEQVKVPRDPWSERHANWHNVLSVLVTGATGFLIWWIIAEATTPDGTKVWRTWRTLVHAGVILVGAAAGWYAAGKYRVWQKTRTRGEDDTSLFWLVAGGILASLVLAAAAGYAQAELLTTPGEPVTSLDSSELLDIARSTTFALGALGAVAVLLVNYRKQRAVEAALRYDQAKHRAELANEDRKQRASEIAALHDRYTKAVEQLANKENSAIRLGGVHALAALGDDWAAQGMLSQRQVCVDLLCSYLRSNEPFEDDRDPDFGRIIEWVRAPESLREDRDVRKAALEWLSRLATADYKAQKEAGFPAEWPQKVKIDLRGVVLRDLDLSYATLSYLPLRQADLVRTDLTRADLTGADLREAELRDANLMQVAAVDANLMAAKMTGASMRLANLRHASFTNADLSDVRLIGTDLRSADLTGARLDDASLVGARVDRYTSFISARLIDTDFDRVDLSVIDPKGVNLSNAKNVSLVP
3722..5296                         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; LRS1606.4; phage(gi557307612)     4.73e-11            RhodococcusspNS1MKKSDRDIMEILEAYDTTGNAHSAAQLAGVDPKTVRRYVAARDAGMPLTGPSRRPRIIDDYMPKIEEWVERSKGKVRADIVHERLVDLGFDGTERTTRRAVADVKAAWQAGHRRTYRPWITEPGLWMQFDWGDGPKVPGPGGVLRSTLLFCAWLAWSRYRVVIPVWDQTLPTLIACLDATVRRFGGVPTYALTDNPRTVSIDHIAGIPVRHPQIVETARHYGMTVHTCIPYDPESKGGSEATVKIAKADLVPTDANLLADYVSFAELEAACERFCATVNGRRHRESARIPTEAVAEERARLHTLPASPHTLALGTTRSVGTDQTIRFGSVRYSTPPGLVGSEVWVRVAGTELVVVADLDALPRVPDWAENRRGLSEVARHLLSTPGNPQIDPAHYPDHPQDPDGSPKPPVPKARSAAEARFLDLGPGAHTWLIAASAAGTVRIRAKMTGAVELAAFVGAAAVDAALAVAAEAGRFADGDLPAIVAHHTATAAETGLVVADEAHSVQPGTAAWAGFGAAGTGVGS
5293..5685                         PROPHAGE_Escher_CFT073: transposase/IS protein; LRS1606.5; phage(gi26248359)         3.70e-09            RhodococcusspNS1MNASAPPLPDDLIAVLKRMRLPYLRAAAPEVLATAKAQRWDPTEVLKVLLDEEVRGRDEATKAMRRKTAGLPAGKTFSSWREADSSIPAPTQQALATLEWVGRAENLAVSGPSVIDGCSSTLSNVSDDVC
5705..6931                         PHAGE_Lactoc_bIL310_NC_002669: integrase; LRS1606.6; phage(gi13095863)               7.30e-09            RhodococcusspNS1MPGYRRERNNVRSNAVAYCVAVRPPGGRRTWTVIDGSYRTVGSVEQWLESHRHLWSPNTVRGYATSLAQWWTFLERRGESDRWQDVGVPAVGGFLSWLRNGRTVEHAVVASQPVPAPSTLEARLAAVVSFYRWQEAVFGVPVAGRVLRGPARRMPARALLAHLDARVAPRPSSLVRVRSHRRGGRPPVLLPGQIEQILDGCAVLDPTTGDWVGNLRDRFLFALLAETGMRLGEALGLRIGDFVMGRGGTPFVEIVPREDNANGARVKMMRPRRVYVGADLERWFADYLTHLACRAADLGLPLGPESPLLVNLDRPPFLSPLREGTVRDKVAALRRNGIGPDDWTPHWFRHTHATALLLAGTPEWVVTRRLGHAHVQTTLDLYGWVREDEALQAAANRLVHTPDRQASE
6928..9069                         PHAGE_Lactob_JCL1032_NC_019456: integrase; LRS1606.7; phage(gi418489141)             6.70e-07            RhodococcusspNS1MNGRWPPSPGGLETADPIWRLWQELPPQWRGPIIGPAVEDWDKITENASARIRLHDLPETIAAELAWMAHWQARDGTRSSVLATNQLANIVRRAIRDRHPFPPSIRAMDWDQAAALQRWFYATRWGRLPPHGSIARLRVLFRFARLALVARCHDGHWWQLDDWHPRCDPRIPLTGREPQGNYGCSPGQIRHRWLREAAKWQLGTALEAGTLRWSTVSQERIKCLTRFDRWLSTGDDPLRVLGDPADAAAHAATFRRWDADPAHRLLRTNDRRFADKPVHPRQINDDLRAVGELFAFVAGHRADAHRLLDTAPWSRLTEAHAASWLRQVTRIKHTREINDAHYVDDHAMSQILAALPLLGLPRDQQMLLPGDGGTPAPAAGFDDPQAMRMILLQILTGRRASEIRTCRFDCLTAPPTSAVTDEQIARFHYAQTKIDSAPDTILVDRQVTEIIGEQQRWVREKFPDHEPRFLFVQRNGNRTGGKPYPPGTYAWMLREFSDRVQITDSRDRPIRLSHTHRFRHTRFTRLAELGLPIHVLQRYAGHATPTMTMHYIAARQQHAEQAFLATVKLKADGTRIQFSRDDHDSLHLFDRADRRLPHGWCLLPPLQTCDKGNACLTCSVFVTDATHRSVLQRQLDDTTELIDHATTEFETKYGHPMPDDNIWLTHRRTEQHALTRLLDALPPEPGPAAGSGCSRPATTGPIPLPLLTRRTQP
9066..9512                         hypothetical protein; LRS1606.8                                                      N/A                 RhodococcusspNS1MTTPRAARTAALIAAAKSKSARKTADAEQAIRRLLTRGERITFQAVQREAGVSHAFLYNHPELRPRIERLRAEATPPAGTDTTRADPENTLVRVLGRQITDLKKQHRTEVLALRDALEQAHGENLELRRRLDRTGAATSRVPSIDEPS
9499..10020                        PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LRS1606.9; phage(gi557307613)     1.22e-34            RhodococcusspNS1MNRHDQRQHAISRPEPGITGGVGKTHLSVGLARAAVHAGYRTYFTTAADLAARCHRAAIEGRWATTMRFFAGPTLLVIDELGYLPLPGEAASALFQVVAQRYLKTSIVMTTNRGVGEWGEVLGDTTVAAAMLDRLLHRSVVLNLDGDSYRLRDHHARSENLRKATTGTRQPLQ

#### region 2 ####
94196..94207                       attL                                                                                 N/A                 GATCACAAACTG
105131..106705                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; LRS1606.107; phage(gi557307612)     1.08e-11            RhodococcusspNS1MKKSDRDIMEILEAYDTTGNAHSAAQLAGVDPKTVRRYVAARDAGMPVTGPSRRPRIIDEHLPQIEQWVERSKGKVRADIVHERLLALGFDGTERTTRRAVAEAKAAWQAGHRRTYRPWITEPGLWMQFDWGQGPKVPGPGGILRSTLLFCAWLAWSRYRVVIPVWDQSLPTLIACLDATLRRFGGAPTYALTDNPRTVSIDHVAGIPVRHPQIVETGRHYGMAVHTCVPFDPESKGGSEATVKIAKADLVPTDANLLPDYASFADLEAACDRFCATVNARRHRESARIPTEALAEERVRLHTLPSTPHTLALGTTRSVGTDQTIRFGSVRYSTPAGLVGAEVWVRAAGTDLVIVADLSALPRIPDWAGGRRGLSEVARHRLSTPGNPSIDPAHYPDHPQQPGGAPRPPTPKARSAAEARFLEVGSGAHTWLVAASAAGAVRIRAKMAAAVELAAFVGADTVDAALAVAAEAGRFAESDLPAIVAHHTATTGDAGVVVADEAHSVQPGTAAWAGFGTTTAAGAS
106705..107478                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LRS1606.108; phage(gi557307613)     6.17e-33            RhodococcusspNS1MNHQPAPALPDDLVAVLKRMRLPYLRAAAPEVLATAKAQRWDPTEVLKVLLDEEVRGRDEATKAMRRKSAGLPAGKTFSSWREADSSIPAPTQSSLATLEWVHRAENLAVSGPSGTGKTHFVEALAHAVIDAGMRVSWFTLESLTAAIGRAAVDGSIAKTITRITRAELIVVDDIGMLPSGQAAAEAFYRLVDAAYERRSLAVTSNLHPSGFDTIMPKTLATAAVDRLLHHAHVVITEGTSLRLQDATTGRGVMPLT
107803..109179                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; LRS1606.109; phage(gi557307612)     2.04e-21            RhodococcusspNS1MLTWEDDVEVHALRKRGWTISAIARHTGRDRKTIRAYLNNERTPGVRTRTEPDPFEPFVDYITCRLREDPHLWARTLCDELEDLGYRMSYQTLTRQIRDRELRPVCEHCANATDRANAVIEHPPGEETQWDWVDLPNPPASWGWGSMAHLLVGSLAHSGRWRGVLAPAMTQPHLVDGLDRICRGLGGLTRSWRFDRMATVCHPDSGRMTASFAGVAKHYGVTVTICPARAGNRKGVVEKANHTAAQRWWRTLPDDVTVEQAQARLDEFCRVRSDTRPRRTADGRTTVGALAAAEALSPPPTVPYPAILTESRVVSRQALVSYRGNRYSVPPELASAQVTVTRVLGAEVIDIVTGSQITIARHRLAPDGAGVMVRDHGHVHALEQVAMAAAGTGGRPHRRKERIPPGPEAVEAAHALRRRTTEAAASSDESDPAPATSASTVIDLSTYERAARGRNTLA
109176..109613                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LRS1606.110; phage(gi557307613)     5.26e-13            RhodococcusspNS1MNSTPATTDPIPPPNTNEAASLYQRLRGHLAVLKLHDAAEALPSVLDRAQKDNLSMTAALEQLLAIEVDATEARRLAGRLRFACLPTPASLEDFDFDAAPNLDRRLIAELGTCRFLETATNVLLIGPPVIDGCSSTLSNVSDDVC
109633..110859                     PHAGE_Lactoc_bIL310_NC_002669: integrase; LRS1606.111; phage(gi13095863)             7.30e-09            RhodococcusspNS1MPGYRRERNNVRSNAVAYCVAVRPPGGRRTWTVIDGSYRTVGSVEQWLESHRHLWSPNTVRGYATSLAQWWTFLERRGESDRWQDVGVPAVGGFLSWLRNGRTVEHAVVASQPVPAPSTLEARLAAVVSFYRWQEAVFGVPVAGRVLRGPARRMPARALLAHLDARVAPRPSSLVRVRSHRRGGRPPVLLPGQIEQILDGCAVLDPTTGDWVGNLRDRFLFALLAETGMRLGEALGLRIGDFVMGRGGTPFVEIVPREDNANGARVKMMRPRRVYVGADLERWFADYLTHLACRAADLGLPLGPESPLLVNLDRPPFLSPLREGTVRDKVAALRRNGIGPDDWTPHWFRHTHATALLLAGTPEWVVTRRLGHAHVQTTLDLYGWVREDEALQAAANRLVHTPDRQASE
110856..112997                     PHAGE_Lactob_JCL1032_NC_019456: integrase; LRS1606.112; phage(gi418489141)           6.70e-07            RhodococcusspNS1MNGRWPPSPGGLETADPIWRLWQELPPQWRGPIIGPAVEDWDKITENASARIRLHDLPETIAAELAWMAHWQARDGTRSSVLATNQLANIVRRAIRDRHPFPPSIRAMDWDQAAALQRWFYATRWGRLPPHGSIARLRVLFRFARLALVARCHDGHWWQLDDWHPRCDPRIPLTGREPQGNYGCSPGQIRHRWLREAAKWQLGTALEAGTLRWSTVSQERIKCLTRFDRWLSTGDDPLRVLGDPADAAAHAATFRRWDADPAHRLLRTNDRRFADKPVHPRQINDDLRAVGELFAFVAGHRADAHRLLDTAPWSRLTEAHAASWLRQVTRIKHTREINDAHYVDDHAMSQILAALPLLGLPRDQQMLLPGDGGTPAPAAGFDDPQAMRMILLQILTGRRASEIRTCRFDCLTAPPTSAVTDEQIARFHYAQTKIDSAPDTILVDRQVTEIIGEQQRWVREKFPDHEPRFLFVQRNGNRTGGKPYPPGTYAWMLREFSDRVQITDSRDRPIRLSHTHRFRHTRFTRLAELGLPIHVLQRYAGHATPTMTMHYIAARQQHAEQAFLATVKLKADGTRIQFSRDDHDSLHLFDRADRRLPHGWCLLPPLQTCDKGNACLTCSVFVTDATHRSVLQRQLDDTTELIDHATTEFETKYGHPMPDDNIWLTHRRTEQHALTRLLDALPPEPGPAAGSGCSRPATTGPIPLPLLTRRTQP
112994..113440                     hypothetical protein; LRS1606.113                                                    N/A                 RhodococcusspNS1MTTPRAARTAALIAAAKSKSARKTADAEQAIRRLLTRGERITFQAVQREAGVSHAFLYNHPELRPRIERLRAEATPPAGTDTTRADPENTLVRVLGRQITDLKKQHRTEVLALRDALEQAHGENLELRRRLDRTGAATSRVPSIDEPS
113427..113942                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; LRS1606.114; phage(gi557307613)     2.22e-38            RhodococcusspNS1MNRHDQRQHAISRPEPGITPGTGKTHLATALGIVAARRGHRVLFATATDWVTRLTDAHRAGCLHRELTRLRRYGLIIIDEVGYLPFEQDAANLFFQLVSSRYEHASLILTSNLPFSGWGGVFGDQAVAAAMIDRIVHRADVLTLKGASYRLRGRNVDSLPSIRTTTGNNGD
113932..114234                     hypothetical protein; LRS1606.115                                                    N/A                 RhodococcusspNS1METKLPSTVHFSNVGIVQTSSAVNRRRVDARPRRTKVDWARQVKELLCVDYPDAETAVLVMDNLNTHGIGSLYEAFESAEAFALAQRFEIHHTPRTRLVA
complement(114421..115038)         hypothetical protein; LRS1606.116                                                    N/A                 RhodococcusspNS1MHHADRAALIVGITEPERNPPEMLDDLVIAFAPRVGQAGLDRPNDRILPGLLTRVAPGWSISGVVGHIRAGRGDACSENGTLIWTSVCQEHRERRRPGPSSWAPPLWVRPHPSGDERVDFDAWSTLICAGWLPQDGYSAGVPRSSNIERDPNGALVIAHSVLADHSQALPSPPRDSGRYWGRWWCQTRARVSHYKRRHHKLSLQH
complement(115025..115318)         hypothetical protein; LRS1606.117                                                    N/A                 RhodococcusspNS1MQFQSPEEYKVEVFRALGDPIRLDIMSRMIHSEEVACTDLERILPVSKSTISYHIKVLSGAGLVHVRKEGRNYFYRARRDIIDEHLPGLQDLIDAPR
115605..115943                     hypothetical protein; LRS1606.118                                                    N/A                 RhodococcusspNS1MLHVCDLLVLVASELISRAGMDVALSRMQGEAAQGTVVAGRRLWGPAEFSGGDERVDIDAWSTLTRKSDGEWAGRRRPAQPATLFFYNRFGYQAAVSVMTALPSRMGCPPGL
complement(115964..116239)         PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; LRS1606.119; phage(gi100019)     4.52e-19            RhodococcusspNS1MPAVGAYRVCWRVSSHGRMRSMGAPRKYPEELKERATRLAVEARRDPGSKTGAIKQIADQLGIHPEALAHLGAPGKRSTVGCRVGYRTAGR
116700..116711                     attR                                                                                 N/A                 GATCACAAACTG
