gi|00000000|ref|NZ_CWSO01000005.1|  Vibrio cholerae strain A325, whole genome shotgun sequence. 252134, gc%: 47.58%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
193921..193934                     attL                                                                                 N/A                 TCTGGTGGTGCTGT
complement(205469..206281)         PHAGE_Mycoba_Milly_NC_026598: hydrolase; ALE21_RS11390; phage(gi764160985)           1.66e-05            VibriocholeraeMNSMLIDGQKMAYLDVGEGEVLLFGHSYLWDHQMWAPQVAALSQRYRCIVPDFWAHGASEAAPAAMSNLKDYAQHMLALMDHLQIEHFSVIGLSVGGMWGAELALLAPKRVQSLVMMDTFVGLEPEVTHKKYFAMLDTIAQLQAVPAPIVEAVVPMFFASNTLKNELPVVAQFRLALQGLSGERAVEVARLGRMIFGRRDLMDEIEHLTLPVLIMVGSEDTPRPALESYLMQDTIRGSQLEVIEGAGHISSLEQAESVTHHLQTFLATVY
complement(206435..207454)         PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; ALE21_RS11395; phage(gi16130960)     0.0                 VibriocholeraeMRIIGIETSCDETGIAIYDDEKGLLSHKLYSQVKLHADYGGVVPELASRDHVKKTIPLIKAAMAEANVTPQDLDGVAFTAGPGLVGALLVGATIGRSLAYAWNVPAVPVHHMEGHLLAPMLEENPPPFPFVALLVSGGHTMLVEVKNIGEYRILGESIDDAAGEAFDKTAKLMGLDYPGGPLLAKLAEKGTPGRFKFPRPMTDRPGLDMSFSGLKTFTANTIAANGDDEQTRADIAYAFQEAVCDTLVIKCKRALEETGLKRVVIAGGVSANKQLRADLEKLAKKIGGEVYYPRTEFCTDNGAMIAYAGMQRLKNGDVCELGLQARPRWPIDQLTSIQK
207695..207910                     30S ribosomal protein S21; ALE21_RS11400                                             N/A                 VibriocholeraeMPVVKVRENEPFDVALRRFKRSCEKAGILSEVRRREHYEKPTTVRKRAKAAAQKRHAKKLARENARRVRLY
207940..208383                     PHAGE_Bacill_G_NC_023719: gp509; ALE21_RS11405; phage(gi593777964)                   5.09e-13            VibriocholeraeMALIENLKEEQKLAMKAKDKPRLGAIRLVLAAIKQREVDEQITLSDDDIVAVLTKMVKQRRDSVSQYEAAGRQDLADAEKAEITVLEEFMPQPLSDDEVKALIDSAITESAAAGMQDMGKVMAVLKPHIQGRADMGKVSGLVRAKLA
208473..210236                     PHAGE_Helico_phiHP33_NC_016568: DNA primase; ALE21_RS11410; phage(gi371671350)       3.66e-49            VibriocholeraeMAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSEGMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEVLEKLLDERTGFDHQLRRKKARKKENRPAPHKAIKRTPMRDVIALLIQNPSYAELVPDLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVEDNQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLILKGLKA
210335..212212                     PHAGE_Synech_S_CBS1_NC_016164: group2 RNA polymerase sigma factor; ALE21_RS11415; phage(gi356870821)     1.72e-34            VibriocholeraeMDQNPQSQLKQLVLRGKEQGYLTYAEVNDHLPAEIVDSEQVEDIIQMINDMGIKVVETAPDADDLALSDDTTITDEDAAEAAAAALSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQSAIAEYPGTIPYILEQFDRVQAEELRLTDLISGFVDPNDMETEAPTATHIGSELSEADLADEDDAVVEDEDEDEDEDGDGESSDSEEEVGIDPELAREKFNELRGKFQNLQLAVNEFGRDSHQASEASDLVLDIFREFRLTPKQFDHLVETLRTSMDRVRTQERLVMKAVVEVAKMPKKSFIALFTGNESNEEWLDKVLASDKPYVAKVREQEEEIRRSIQKLQMIEQETSLSVERIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPLPEELAERMQMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATATSLKAATRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDE
212357..212432                     tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCCCCAGTTCGAACCTGGGAGGGGCCACCA
212598..213839                     PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; ALE21_RS11425; phage(gi16130540)     1.36e-154           VibriocholeraeMAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGSFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKFSDRWLALKRESVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAGANITLSTRCLLEWQLHTMTRPIESATARWQDIDFENRVWVVPEERMKMKRPHTIPLTEQTLALLEIMKPISGHREFIFPSNKNPKSHVNSQSANMALKRMGFEGQLVSHGLRALASTTLNEQGFNPDVIEAALAHVDKNEVRKAYNRAEYLEQRRKLMCWWSDHITASAEGNVSLASRKGLKLAG
219819..219832                     attR                                                                                 N/A                 TCTGGTGGTGCTGT
