gi|00000000|ref|NZ_CP012514.1|  Salmonella enterica subsp. enterica serovar Thompson strain RM1986 4701355, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1058483..1059685)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; STho1986_RS04920; phage(gi100242)     4.88e-49            SalmonellaentericasubspentericaserovarThompsonMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPDQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1059831..1059845                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1059880..1061172)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STho1986_RS04925; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarThompsonMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRPGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
complement(1061217..1061465)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STho1986_RS04930; phage(gi169257269)     2.25e-55            SalmonellaentericasubspentericaserovarThompsonMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1061506..1061745)       PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS04935; phage(gi966201452)     4.00e-40            SalmonellaentericasubspentericaserovarThompsonMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAK
complement(1061788..1062945)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STho1986_RS04940; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarThompsonMCVALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTKEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1062908..1065823)       PHAGE_Salmon_SPN3UB_NC_019545: RecE; STho1986_RS04945; phage(gi423262421)            0.0                 SalmonellaentericasubspentericaserovarThompsonMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAVNATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQRIVDGVNTETGEVLEDHNENFENKDSSPTPSPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKAVNAIKNVFPVDRKIPELGTIIQFLKTWFDTEHIDRGLLVKEWAKGNRTSAIQRTESGANAGGGNKTDRHPDVKHNFDVLDIEIALATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEYYQYPGRLRGYINANLTESNHEKPTAETLAAARHTPEKDAVEEANRQLAAERGDFVPGISDPNDPKWVKTGTSQPASEPELVKNVGNGIFDVSALMQNSSTYGTKTAPEATSSVQVQEIVSDEKQAGDAMQAGENDLGNGEKADTIENQSQAETHQNNTSVSQSEPEEQQNVPDSPQEKPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHTLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPAPVPLGASLEETGQSYMALPAEYQRIDADQKQTAAAMKACIKEYNTTLSTPVKTSGSRDALLEQLAIINPDLVTQEAQKSVPLKVSGTKADLIQAVKSVNPAAVFADELLDTWRENPEGKVLVTRQQLSTALNIQKALLGHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKAMRAIANGFDTGEWPAPITEDYTEELNDFDVRRLEALRVQA
complement(1065946..1066296)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1986_RS04950; phage(gi169257261)     1.54e-66            SalmonellaentericasubspentericaserovarThompsonMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENKVSGAVHSNSTGETTVILDGGYVLGKFDCPHCAVTAISLLIVKIREGEKTGYGNYQKHKQTFMEQAFVTVH
complement(1066318..1066488)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STho1986_RS04955; phage(gi423262423)     1.70e-20            SalmonellaentericasubspentericaserovarThompsonMHNQNTCAYHLCGKPIEQGKEVKSPLLYRKGSQLARKEKEYCSRQCAEYDQMAHES
complement(1066481..1066747)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1986_RS24055; phage(gi169257259)     1.40e-18            SalmonellaentericasubspentericaserovarThompsonMFTPRNRTFGCKFHFTNRTFGFIVSFIDNKRIVVRFKTFRWPAIRQTRVRMIDFARKPARQQAVLLNRIEVLIRRLCYLLAQKGDPDA
complement(1066791..1067201)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STho1986_RS04960; phage(gi169257276)     2.30e-93            SalmonellaentericasubspentericaserovarThompsonMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGMSVASGERLKRLSAVTGRPEYWFFMEPGDESEDERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNDVFDLINDLKK
1067321..1067560                   PHAGE_Salmon_SEN34_NC_028699: regulatory protein; STho1986_RS04965; phage(gi966201461)     2.69e-13            SalmonellaentericasubspentericaserovarThompsonMDNQVKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWRVTPHEIDPAAYPNPTDGLPSQETSAK
1067526..1067900                   PHAGE_Salmon_SEN34_NC_028699: putative DNA-binding protein; STho1986_RS04970; phage(gi966201462)     2.78e-71            SalmonellaentericasubspentericaserovarThompsonMDYQAKRRQPNNHRGYLPMENAIARKLDPPEINPVEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLRAERARPDALGWD
1067991..1068968                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STho1986_RS04975; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINANLDKWAYSKPHCSKCPVSFPDAEIATWIISVHETRDSYPRKEGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRVSPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1068971..1069720                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STho1986_RS04980; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
1069731..1069934                   PHAGE_Salmon_SPN3UB_NC_019545: putative DNA-binding protein; STho1986_RS24645; phage(gi423262429)     8.32e-43            SalmonellaentericasubspentericaserovarThompsonMARPKTHSERMIILERIIGLVKEQGRITTNDVVAMFGVHRTTAEKYLQIALVRGGFIRHGRCGVFRD
1069944..1070078                   PHAGE_Salmon_SPN3UB_NC_019545: putative DNA-binding protein; STho1986_RS24650; phage(gi423262429)     3.01e-24            SalmonellaentericasubspentericaserovarThompsonMDYDLKRYSCNKTTGFSALPALEKSPVMQVYGASKMSINKGGAQ
1070075..1070608                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STho1986_RS04990; phage(gi23505476)     1.37e-54            SalmonellaentericasubspentericaserovarThompsonMSNINKQALRERYSPKPVPKCHICGEEMTIQRISASRITYGCTGATYDDIGCHYAEGRSIADDHYEQSRVTVVDVSDPDVLALLDELEHYKSREERVTKLVLDNSTSWDVLYEKLEAAEKRIAEQREYYEGVIADGSKRIAELEAREVSVSEIRKNKFIEKTEDELDGDHYTICKNG
complement(1070635..1071627)       M85 family metallopeptidase; STho1986_RS04995                                        N/A                 SalmonellaentericasubspentericaserovarThompsonMKISSSTPCLNFAPQKEYSAAVVPHPSKNAYADYVLETGKRIPFSAADLSNLYQSVIYAVHSSRSRLIDQHTANMIGNTVLDALSRSQTFRDAVIYGIHNKEVQLGCITYRNEYEINEDSPVGVDSIHLLTHSELYEYEAGQEPILPICEARKDEHEEAYISFSAAPDTDSCEMPSWQEGLIHEIIHHVTGAGDPLEDGNIEPGPTEILARRIAQELGWSIPEFTGYASPDRVAHLRTRNLNALRQTATRHEDNEEAFFERLDVISEGYEASADFTEYPVMSDMVKELNKPHDFPGLVINDNTMDADPDQIQLYHGQPYIFTFVDKHNQR
1071897..1072130                   PHAGE_Salmon_SEN34_NC_028699: DNA-damage-inducible protein I; STho1986_RS05000; phage(gi966201471)     4.15e-27            SalmonellaentericasubspentericaserovarThompsonMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1072242..1072463                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; STho1986_RS05005; phage(gi169257285)     4.63e-46            SalmonellaentericasubspentericaserovarThompsonMAEGVLSDLADNLRVTITDAKGIELLSFRLASGDRYILSTQNGSVTNRKLSRDDLYWSKDTIMEVVREMGSNN
1072546..1073148                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05010; phage(gi966201473)     3.14e-145           SalmonellaentericasubspentericaserovarThompsonMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1073148..1073354                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05015; phage(gi966201474)     1.19e-25            SalmonellaentericasubspentericaserovarThompsonMTMKYSWFHHHDCTTEQADELVARYRARGVKTERSLNPDYTTWTVSAFLPTSSKPARPDNRWRNRVWG
1073357..1073968                   PHAGE_Salmon_SEN34_NC_028699: protein NinG; STho1986_RS05020; phage(gi966201475)     6.27e-144           SalmonellaentericasubspentericaserovarThompsonMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERATWRQRKAAVKPLKHWIGLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRTTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1073965..1074102                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05025; phage(gi966201476)     1.52e-13            SalmonellaentericasubspentericaserovarThompsonMKPELIEILRARWQRLRIYRYRGSVLVDYRILRNFVRIYHSAGAA
1074102..1074911                   PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; STho1986_RS05030; phage(gi966201477)     1.11e-82            SalmonellaentericasubspentericaserovarThompsonMNLESIAKYFAPKSPMYSDSSRATATDCLTGTDVMAALGLVNAKCGFGFDLYLAKIGISSPDRAMEALYDSSVEISQRFKSVKELDEKVRRRVLEIMCAFAYQDYARSAASVRRCDCCDGSGFTEVEVFTNKIQYPDGKPPKWAKVTKGVFPSYWEEWKSVRESARVLCKACNGKGVISNACRCHGKGMVLDKEKTDKQGAPVMKVCDRCTGRGYARLKFSNVLEGVRTVWDVKKTTAYDHVQPLFELLVEECHRQESYADSALKSVTK
complement(1075214..1075711)       PHAGE_Edward_GF_2_NC_026611: hypothetical protein; STho1986_RS05035; phage(gi764162267)     2.76e-49            SalmonellaentericasubspentericaserovarThompsonMDKFDRPRQRLFLQGLYDAYPEELTNEQLEELLSTFPDKKVTTANLLYLEKHGLIFSGLQEGAVGYHLVNRPAITHKGINFIRDDGGLGAILNVQTVKFHDSTITALEDIIRVANLPDEKKSGLISKLRELPSDAIKHLTLQLLTKGVLNLPAALPIIEKFLRPV
1076051..1076239                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1986_RS05040; phage(gi169257242)     2.48e-31            SalmonellaentericasubspentericaserovarThompsonMKEGYYWIQHNGVAQVAYYTNDTVDDLESGQLIVGVWHLTRGDDICHNGEAEVLSGPLQPPV
1076329..1076718                   PHAGE_Entero_mEp390_NC_019721: putative holin; STho1986_RS05045; phage(gi428782712)     5.16e-57            SalmonellaentericasubspentericaserovarThompsonMSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGAVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNSLFSILSRIRGGGSNGSK
1076705..1076986                   PHAGE_Entero_mEp390_NC_019721: putative holin; STho1986_RS05050; phage(gi428782713)     3.69e-49            SalmonellaentericasubspentericaserovarThompsonMVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWARGNVARLVDALRH
1076986..1077600                   PHAGE_Salmon_118970_sal3_NC_031940: portal protein; STho1986_RS05055; phage(gi100069)     2.46e-88            SalmonellaentericasubspentericaserovarThompsonMNQQQFQQAAGISAELSASWYPHITAAMSEFGITAPLDQAMFIAQTGHESAGFTVLKESFNYSVEALKKTFGKRLTPYQCEMLGRIDGRQVAHQPQIANLVYGGRMGNNSHDDGWKYRGRGLLQITGRENYAKCGAALKLDLISTPELLTQEKHAACSAAWYFTLRGCLMYSGDVVRVTQIINGGQNGIGDRRERFEKAKSVLV
1077597..1078139                   PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; STho1986_RS05060; phage(gi966201566)     6.08e-26            SalmonellaentericasubspentericaserovarThompsonMIVLLKLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTVLQREVTERAKEQRRQHAADEEQKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAQLLGEADDLAGKFAKEADERYVAGSTCERTWDKVTGQN
1078242..1078745                   hypothetical protein; STho1986_RS05065                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMRRILATAAALCLGGCITVYGPVKTGGQQQQDSQAGQQLGMSEQISTLFIGNRKPDELLNAVALYFREKAITASVNDQTTGIIAGTGDDPELSSLYLDCSLLPQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVNPVECKSTGIFEKDLLEQLRK
1078806..1079435                   PHAGE_Salmon_SEN34_NC_028699: terminase small subunit; STho1986_RS05070; phage(gi966201418)     1.09e-149           SalmonellaentericasubspentericaserovarThompsonMAKPDWEAIETAYRAGVMSLREIASHHGISEGAIRKRAKRDDWSRDLNARIQQKADDLVRKQEVRKTVRTKTELTERVLIEATAEVIASVRMEHRGDIRRARELTNTLFDELGAQCADVGALEQLGNIMFDPDDKGRDRLNETYQKVISLPSRVKSLKDLSDSLKTLIGLEREAWSIGTASEPEKTPLPGKNTDLTTDQAAELYKKMMG
1079438..1081060                   PHAGE_Salmon_SEN34_NC_028699: terminase large subunit; STho1986_RS05075; phage(gi966201419)     0.0                 SalmonellaentericasubspentericaserovarThompsonMPLPFSFDFKHPDYQMVFEWRMERLQRIRQHPEMLPALKQFYRTNPAQFIIDWGMTTDPRNIDYGLPVTIPFLLFPKQEEWIHWIMERWGKRENGITEKSREMGLSWTAIGMACSLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFVETLPVEFRGAWNEKKHAPYMRVEFPETGAVIKGEAGDNIGRGDRTTLYLVDEAAFLQRPLLIDAALSQTTRCRIDLSSVNGMANPFAQKRHGGKIPVFTFHWRSDPRKDDEWYRRECEKIDNPVVVAQELDLNYSASAEGVLIPSDWVQAAVDAHIRLGIQPTCKRLGAMDVADEGRDKNAFSTRHGFLLENVREWSGVGSDIYQSVEKVFGFCEQDNLEEFRFDEDGLGAGVRGDARAINELRKAARRPPILATPFRGSGAVFDPDDEAVRGDNGQAARLNKDFFANAKAQSWWYLRKLFRNTYRAVVEGMAYNPDEIISISSTMESKDKLIIELSQPTYSINGVGKIVVDKQPDGTRSPNLADSVMISYAPMNSALNIWELLGRQA
1081060..1082529                   PHAGE_Salmon_SEN34_NC_028699: putative portal protein; STho1986_RS05080; phage(gi966201420)     0.0                 SalmonellaentericasubspentericaserovarThompsonMARNKQASRRTVQATADGYENFVARVGMQTPNQHSASTYRANFTSRNRMLVEWSYRSSWLIGEAVDAIPDDMTRKGIRITSEIDAKDRGTLEAQLDQLQIWDALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRLETIGEGKFKGILPLDRWMINPVLTRRIKEMGPNLGKPELYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVERIWDRLTAFDSATVGAAQLVYKAHLRTYKVEKLRELIALGGPAFEALLKNIDLIRQFQSNEGMTLMDAKDTFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGDADLANYYDRVSSLQERRLRLPVRRVLDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRSTVAVNTTTAIVNALDAGLMTTKAAMTDLRENSDVTGIGASITDEDIENAEDEAPPDIGELVDKPPEPTGGDPISNEPTADSAGGRGYRKWALRWFKR
1082414..1083151                   PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; STho1986_RS05085; phage(gi966201421)     1.97e-145           SalmonellaentericasubspentericaserovarThompsonMSTNRQSRQAEIRYRTSLRQIARAVGDIVNGHYDGSNDSVTEIMEALERYSEIITPWATKVAENFTADIVRQNEKQWRQHSRNISAELRNMVDRAPVGQVMKSIVAEQIKYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEPFAKEIAASGDVSRSRANLIARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNCRCYKEIVFPNPHSYLA
1083166..1084398                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05090; phage(gi966201422)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKYFFNTRLGETRYQLADGSLLCKDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGHLQNVRRGTGDQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKARQVDITGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQPLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQNADFWSNRKG
1084403..1084900                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05095; phage(gi966201423)     9.53e-115           SalmonellaentericasubspentericaserovarThompsonMTAYLYRMPVGIAGAISRPQDLTVEPVILKSDNAFAAYGLAGKYDADGFFVPLAEGDTVDKVKGIYVRPYPTTSQPDMVRQVGTDKNFPGDAMKRGYMTVNVGADASSVKKGGVVYIVVSADASIPVPLGGITAAEVTGKTAALPDAFFTGAGDANGNAEISWKI
1084912..1085853                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05100; phage(gi966201424)     0.0                 SalmonellaentericasubspentericaserovarThompsonMITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTLNNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPLEIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPMVPLQSVPVQYRGLYQIATYYGKLGAVEPVYKETLSYVDGI
1085895..1086263                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05105; phage(gi966201425)     2.07e-84            SalmonellaentericasubspentericaserovarThompsonMVKEKLVTIHVHTPFTLTLGDQSKQEFGRGRHNVPEEVASHWFTRAHAELSESGSNETDDQQPVIDSLQAQIADKDKLIADLKDALLKLQEQNDSLQAQITSARTGGNGAKDAKESKPANSK
1086229..1086636                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05110; phage(gi966201426)     7.07e-96            SalmonellaentericasubspentericaserovarThompsonMPKNQSLPTVSDFRRDFPQFADPAKYPDVQIEFRLNLADELLSENVTGKKLFPYFAELFVAHYMTLWAADSRAMLVGGPGGSTNGVQSSKYVDKVSVSYDTSATLNPDAGFWNNTRYGAEFYQLITMFGAGGRQL
1086633..1087187                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05115; phage(gi966201427)     8.84e-129           SalmonellaentericasubspentericaserovarThompsonMSFKSGVTTRVDNAQAILDALKSLTKKDVLVGIPAEDSDRDDVSFGNAGIGYINEYGSPAQNIPPRPHLVPGVKSVEDQTMPQLKAAAQAALDGHAAGVERALNRAGTVAARGVKNHIKAANFTPLADSTVEARARRGRKGAKAELARRAAGESPGTTLAKPLYDTGKYLASITHVVRDKDADS
1087174..1087563                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05120; phage(gi966201428)     2.68e-88            SalmonellaentericasubspentericaserovarThompsonMPTLDVTDVLFDPDFCNFNLWVTRRVQTVDENGIGSDSEVKTQFAGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGTPVEQ
1087538..1088104                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05125; phage(gi966201429)     5.06e-133           SalmonellaentericasubspentericaserovarThompsonMGVLPLSNNTSTARGWLTPTSGDPDYDEALDRLLSQWMRNVSGLPAGMVRPRWQKDQPPLLPVETNWCAFGIIEWPIDDNPAFIRQTDSGTELWRHETFVAMASFYGPSGMKFASIFRDGISVEQNNSELNRMGLTLGDVSSITPFPELINQQWLRRYDITVKIRRKVTRTYNIKSIVDGNVAISTGD
1088107..1089258                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05130; phage(gi966201430)     0.0                 SalmonellaentericasubspentericaserovarThompsonMAKGLPLNRVTNVTVTLSARAAQGRNFGSMLILGNSTVIPITERLRLYSDPADIGDDFGVDSEEYKAAVVWFSQSPRPTQLYVGRWIDSLTSAESGPTETLLQAVNALLDYNSWYGLHLAVPVADYPDDADLISVSSAIESATVSRILAITSSEADILSSAVETDLATKLKAAKYSRTYIQYSSTSPYAALSAFGRAFTVNFTGSNTTITLKFKQLPGITYETIGTSQANALEAKNCNVYVYYENDTAILEQGVMCNGDFFDERHGLDWLQNAVQTADYNTLYTSTTKIPQTDAGTTTRIANIEKVLDVADKSGLFAPGIWTGGPMGQLGTGDTLTKGYYTWADTVDNQLQTDREARKGVPIQVAAKLAGAVHYGDVAITVVR
1089269..1089709                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05135; phage(gi966201431)     4.07e-104           SalmonellaentericasubspentericaserovarThompsonMGAYSFLDISASLSGPTGSLDLGAGSANSEEGITVTMTEAKNTMTIGSDGEVMHSLHGGNSGVITVTLLKTSPLNKKLSIMYNAQRMSSALWGNNVIVVRNRVSGDIGTARSCAFQKQPDWNNPKVAGTVAWVFDCGKIDEVLGEF
1089713..1090165                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05140; phage(gi966201432)     4.82e-106           SalmonellaentericasubspentericaserovarThompsonMECNINGVEYRAAKLNVFDQLKVTRKLLPLLAGMMTDFGSIRSLLPADGKVDSKKFDELKPVFETLLPRIADELASMKEEDTNSIIHPCLSVVARKNGTVWTPVFNSGELMFNDINLLIMLQLVARVVADSLGNFLPVSLTSETPDQTQG
1090343..1092352                   PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; STho1986_RS05145; phage(gi966201433)     0.0                 SalmonellaentericasubspentericaserovarThompsonMNAETIKDFLVSLGFGIDEAGYEKFESVLAGVTANAIKTGLAVEGAALSVVAFTAKIASGLDNLYWASQRTGATVQGIQSIGYAVSQVGGSVDAARSSLESLSRFVRNNPGAEGFLNRLGVQTRDASGNMRDMAAIFTGVGQKLSSMPYYRANQYAQMLGIDENTLMAMRRGLGGFSGQYSAMAKAIGFNADEAAKSSNRFMTSLREFGAMAGLARDKIGSNLAGGLAGSLDTLRRHILDNFPRIEQTLTKAIKGILTLGDIIGRLFFRLIEGTSSLITWWQSLDKQTRELISLFGALTIALRILNSTFWMSPIGLITALAAGIALLWEDYQTWKEGGQSLIDWEKWKPEVDVALKMVRDLKATVNDLAKALAKLLNIDPKSWSLKWDFSNFIDQMGEFSKMLNMIADLLNAIKDGRWADAASIGKQMLNQGSENSSAMPMVTDSANGAADWIKEHWGFDPRSVGRTVRGWFGSDDPEQHGQSVKRPQPTKAGAELLGWMQPMLTNLEHLYRLPEGLLRSVAITESGGNQFAVSGAGAKGLFQFMDGTARDMGLRGNDVFDPEKAAQAAAKYLSQLLRANGGDLSKALASYNWGIGNVQKHGMALMPRETRNYIPKVLSNMPAPGAQVQQQNTYHIYGGGDPHSVGNQVERRQQSANAQLMRGNQTKVG
1092352..1092927                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05150; phage(gi966201434)     4.92e-136           SalmonellaentericasubspentericaserovarThompsonMDILSTLFHQQSRRIGVLIPSVVVSEKHTDTLEITEHPVEVGAAIADHAYKKPSEVVMEVGFAGGGSLLDFASNLTATSLLGLSPQQTYQEILDLQESRIPFDVVTGKRLYSNMLIRALEVTTDRTTENVLSAVLTLREVLISQTQQVTVADKTDMKDGASTSPVLNTGTKTTKPPNTSLLQSGAAFLGLG
1092927..1093229                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05155; phage(gi966201435)     3.36e-68            SalmonellaentericasubspentericaserovarThompsonMTIQEIPLTADNQQFSIILAGITWRIRIIWRDLYWIMDLQNDRGEPVISGIPLVTGADLLAQYAYMGLGFKLVVMCDDSTQDYPTKTDLGGRSHLLVLTE
1093232..1094305                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05160; phage(gi966201436)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSQNWMRHFELQLVGENGQGIQLSDFKVTFTIDWFNISSASRVGTFKIYNLSADTVNRITGQEFSKVRLIAGYDGIAPEVAASDVGIAREVDADTVGQSDGRNYGLIFSGEIRYSVTGKDSPIDSYVLIQAADTDLAFATSITNQTLAAGYTTEDMFRLLMKDFEAKGATVGRTPVFPPTVFPRGRVLFGMTRHLMDNVAAQCGATWQFVDGQLNMLPEGEYMHDAIVLNSATGLIGMPQQTIGNGVNVRALINPNIRVNGLIQLDQASIYKTVLPNNDIAKAAGRYFDETIDGNSNVTLPVSKQMTASIATDGVYIVRGIMYTGDTRGQAWYMDMMCEARGAADLFSSSAQQRIYS
1094302..1094652                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05165; phage(gi966201437)     4.28e-30            SalmonellaentericasubspentericaserovarThompsonMKRMKLVLTVSLMFSCSAAFADLQCGGYRLHAADNGWTKINGEQVTSQKIKFLGKKDDWDNVKTDMGLMPARDGNNYGFEFVKRGGKSFLNVQLLQNSMDAPKIIGSYPCSQIKDK
1094656..1095396                   hypothetical protein; STho1986_RS05170                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMMKKVFASLFICLVPFSAISAVKNITFSDNEKVMVKHLFKYDLQKFINSDAHMFSYATVIASAEKIAEDYDANEARGDRDYKGKPIVISGVVEKIRSTMGDVPAVELKTNVGIQGVSLYFTKENEKLAIDLNKGDKVSYACIGDGSVLGDPVLRGCMPTDEYVDTASDAMYKDSMAMLKDIKDPKSDANTFILFTKMITRLTDNYKLCAATDAKCIVNIIDTTPMEKRKAMAREMSKELGVNVSVK
1095461..1096216                   PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; STho1986_RS05175; phage(gi966201439)     6.28e-173           SalmonellaentericasubspentericaserovarThompsonMAVSDQARSGDLAETFKSERETTKNQIRVALPGIVQSFDPDAVTAVVQPAIRSVEIDNDGNRVTKPYPLLVDVPVVFPRGGGCTLTFPVKAGDECLVIFADRCIDFWWQNGGVQEPVDDRVHDLSDAFCIVGPQSQAQKISGISTSAAQLRTDDGAAFVEVAAGHNVTVKTPGMLTANAEGGTTITSPTITLNGDVTINGNLSQGMGEGGGSATMLGPVTVANDVTAGGKSLMTHTHGGVQTGGGNTGEPN
1096216..1096569                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05180; phage(gi966201441)     3.79e-78            SalmonellaentericasubspentericaserovarThompsonMRYRREDAEGDYTFGCGDDTWLINSPEAVAQAVKTRFALWYGQWFLDKTEGTPWIQSVLGKQKPETYNLAIRKRILETRGVKSILSFNTTVNTTTRRVQFFAEIDTIYGTTTVTSEA
1096570..1097769                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05185; phage(gi966201442)     0.0                 SalmonellaentericasubspentericaserovarThompsonMALNLDTLGLSATVTAEGISAPDYQTIFDTLTSYFQQIYGSDAYLEPDSKDGQMVALVALAVHDANNTAISVYNCFSPATGYGAALTSNVKINGIARKGATNSTVDLLLTGTAGTAITNGTVKDTNNVIWRLPASVVIGVDGAVTVTAICSNSGAVAALAGTITTINTPTRGWTSVTNPAAATVGAPAETDAELRIRQGQSVAIPSITPFEGVDGAIANIAGVTRHKLYENDTGKTDGNGLPPHSISAIVDGGDVTEIARTIRGNKGQGVRTWGKTSVTVPDKYGNPHIISFSRPTDVPVYGKITLTVFAGYTSQIGVQIQQAVADYINRLMIGDPVLLSRIYSPANLGVVSGGNARYYDIQELLIGKSPETVAAANINIAYDESASCKPENIIITVAA
1097766..1098446                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; STho1986_RS05190; phage(gi966201443)     2.13e-159           SalmonellaentericasubspentericaserovarThompsonMSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAMKGLINAFDIDHAAGVQLDILGQWIGLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKTAINNWDGRNDSLPPILDAALDGSGLKMQIVDNQDMTIGIWVFPETDISSVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL
1098446..1099960                   PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; STho1986_RS05195; phage(gi966201444)     1.05e-87            SalmonellaentericasubspentericaserovarThompsonMAKNDFKPFATGKGANVTSQSDWEALPALLSGFTAGKASSAQVNKALRQASFIAAALAQYTASKSGQDVLDDGDLSGFIAKMSAAFGKDFQTLDATLTALAGLATGADKLPYFTGNDIAGQTDLTSVGRDIIGKASIADILTYLGLGETINLAKNAVPATRRVNNKPLSGDINLWASDVKAISADAVGEITDNGTMASANIPGWWRVSVSNSDSVADFPTYPDGSKLYSYGYMFVEKIGEVWFQHYYAHMGANAKRQDWGTEPNTSRPWIIDYNTANKPSAGDVGALPITGGRLNGPLGIGTDNALGGNSIVFGDNDTGIKQNGDGILDFYANSQLVARIQPGSLFVINTVQTGDGKKLSLTSTNNSALNAGFNLWGDGGNRPTVIELGDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLSSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPNEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
1099975..1100493                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; STho1986_RS05200; phage(gi15834244)     2.28e-60            SalmonellaentericasubspentericaserovarThompsonMELKNVTRYIPDDPDYDNNFLYFRSEDGQDFYESLNKFTKRYKLCIDSEGVIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGAVVAVPVDYQDKAEVTRQKLLNDANITIADWRTELALDEISDDDKATLTKWMAYIKGLKSLDLTGISDEATFNKIQWPALPQ
1100742..1100927                   hypothetical protein; STho1986_RS24410                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMNKLNSVLLALVFAISAIAFSSSAMATESGNKGFPGLSFPWCKIWPADIEIPELPWGKICW
1101026..1101451                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STho1986_RS05205; phage(gi169257321)     1.09e-86            SalmonellaentericasubspentericaserovarThompsonPASHIAVFDAETQTWSLKEDHRGETVYDTTTGNQVYISELGPLPENVTSVSPDGEYQKWDGKAWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGLATDDEKAQLDEWKKYRVLVNRVDTLNPDWPEKPSQL
complement(1101579..1102781)       multidrug effflux MFS transporter; STho1986_RS05210                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMKLQTVIHRKNILFFTVGLALLTMMGILGVDTYLPSIPDIAKEFEKNVSTTQLSIMVYTLCIGFGQLIFGPLSDSIGRRKIMLAGTVIYGVTTYCLTLSTGLSTFLAIRVIQGLSISITLVTAISAVRDVTRGSVAATLYAIIITIEGVVPIVSPLLGGVINDVWGWRAIFLMILGYAIITLMYVYFNFPETLSHERRVTYSLKSSFNTYKEISKQPRFYLPCLSLGLSFSLIYCYVTAAPFILMVEFGYSSTQFGVLSSIIGGFLLLGAALSGKLLKKQSAPQILSLWLTLIASFIVLCIPLLIFSHHVNVFIFFFIVLMFAGGMFESLYTYLTMSSQRTSLGATSALMGAASLVIPSVIGGIGSFLIEQSISIWMVYLLLIILIMTYMLRKYQTFTAA
1102974..1103346                   recombinase family protein; STho1986_RS05215                                         N/A                 SalmonellaentericasubspentericaserovarThompsonVIVWKLGAEASSGRSGRRIARTQRFPQPDRFHRYQYTNGTFLFPYHGRTRNGTINCGKNPRRAGSGKGAGANWWQASKAHPGAMGAGRAPDWGRSTATAGSDYLRGTVDAVQKISCEMLA
complement(1103474..1103680)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; STho1986_RS05220; phage(gi428782688)     4.01e-35            SalmonellaentericasubspentericaserovarThompsonMFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDANKSDHEKLNRCLVSD
1103986..1104000                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1915987..1916409                   PHAGE_Entero_HK022_NC_002166: integrase; STho1986_RS09290; phage(gi9634144)          3.37e-29            SalmonellaentericasubspentericaserovarThompsonQFSHIIDERLYVKQIKTGMKIALPLSLNLPSMDLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKIYLDGRDEKAYMML
1916466..1916482                   attL                                                                                 N/A                 GAATACAGAAATTCGGA
1917493..1918407                   DMT family transporter; STho1986_RS09300                                             N/A                 SalmonellaentericasubspentericaserovarThompsonMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
1918540..1918698                   hypothetical protein; STho1986_RS09305                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1918708..1919322                   disulfide bond formation protein B; STho1986_RS09310                                 N/A                 SalmonellaentericasubspentericaserovarThompsonMKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1919649..1919795)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STho1986_RS24125; phage(gi100036)     5.64e-17            SalmonellaentericasubspentericaserovarThompsonIGGRRPKLTPEQWAQAGYLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
1919810..1919956                   hypothetical protein; STho1986_RS24695                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG
complement(1920470..1920595)       hypothetical protein; STho1986_RS09315                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
complement(1920562..1920792)       hypothetical protein; STho1986_RS24460                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFRTEIAADPDRRLDAIVFTLYLRPQVHFLSKPGRTVALFCLAEGLSYDIVAVLPELLVGINDCAPCLPMPIPNSF
1921163..1921363                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STho1986_RS09320; phage(gi169257211)     6.49e-41            SalmonellaentericasubspentericaserovarThompsonMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPADIPFPEDWFKMCRGY
complement(1921460..1922341)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STho1986_RS09325; phage(gi169257205)     7.31e-89            SalmonellaentericasubspentericaserovarThompsonMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDGVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1922499..1922759)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STho1986_RS09330; phage(gi169257184)     7.50e-56            SalmonellaentericasubspentericaserovarThompsonMDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1923067..1923234                   lytic enzyme; STho1986_RS09340                                                       N/A                 SalmonellaentericasubspentericaserovarThompsonMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1923491..1924024)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STho1986_RS09345; phage(gi16765210)     1.59e-123           SalmonellaentericasubspentericaserovarThompsonMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1924078..1924269)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STho1986_RS09350; phage(gi169257182)     8.44e-38            SalmonellaentericasubspentericaserovarThompsonIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1924258..1925409                   PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; STho1986_RS24130; phage(gi327198600)     4.80e-50            SalmonellaentericasubspentericaserovarThompsonGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNPPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEEKQPAAEPEVVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDDIQPGIYYDIPNEAYHAGQGVSKSQLDDIVDTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGITVLTAEEGRKIEFMYQSVMA
1925442..1926521                   PHAGE_Entero_HK022_NC_002166: integrase; STho1986_RS09360; phage(gi9634144)          8.75e-93            SalmonellaentericasubspentericaserovarThompsonMSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKKTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRTAAEHLPVWFPLAMDLALVTGQRREDIVNMKFSDVVDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1926588..1926604                   attR                                                                                 N/A                 GAATACAGAAATTCGGA
complement(1926904..1927257)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STho1986_RS09370; phage(gi971764937)     1.42e-11            SalmonellaentericasubspentericaserovarThompsonMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPYNS
complement(1927274..1928149)       copper homeostasis membrane protein CopD; STho1986_RS09375                           N/A                 SalmonellaentericasubspentericaserovarThompsonMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMCMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1928150..1928524)       CopC domain-containing protein YobA; STho1986_RS09380                                N/A                 SalmonellaentericasubspentericaserovarThompsonMASSARSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1928662..1928892                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STho1986_RS09385; phage(gi422936677)     1.18e-22            SalmonellaentericasubspentericaserovarThompsonMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1929000..1929656                   carbon-nitrogen hydrolase family protein; STho1986_RS09390                           N/A                 SalmonellaentericasubspentericaserovarThompsonMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1929680..1930378                   PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; STho1986_RS09395; phage(gi100273)     5.11e-18            SalmonellaentericasubspentericaserovarThompsonMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 3 ####
2437379..2438380                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1986_RS11880; phage(gi100039)     1.03e-128           SalmonellaentericasubspentericaserovarThompsonMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVERETDELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS
complement(2438377..2439555)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1986_RS11885; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarThompsonMTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPIKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG
complement(2439735..2440109)       PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; STho1986_RS11890; phage(gi100005)     1.60e-05            SalmonellaentericasubspentericaserovarThompsonMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFLFDDTPPR
2440282..2440530                   PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; STho1986_RS11895; phage(gi985760910)     9.13e-25            SalmonellaentericasubspentericaserovarThompsonMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYDDMQIKNDADIAE
2440699..2441067                   PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; STho1986_RS11900; phage(gi311992945)     2.87e-08            SalmonellaentericasubspentericaserovarThompsonMSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGTEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
2441067..2441585                   YbjP/YqhG family protein; STho1986_RS11905                                           N/A                 SalmonellaentericasubspentericaserovarThompsonMNTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNPPDDTTALMQRYVAKEVILRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLGTESTPIHLEVYTRWEEGRWKIYRVRDADRGYEQPIYDAGAITQAEAWSAKVAPEYKKH
complement(2441652..2442308)       CPBP family intramembrane metalloprotease; STho1986_RS11910                          N/A                 SalmonellaentericasubspentericaserovarThompsonMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNAFSGPEPWMAELSRQFFLHKFLNTLAMCFLAPVAEEIIFRGFLLNSSIGWGRYSRASGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVVFGLLFSATE
complement(2442406..2443620)       PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; STho1986_RS11915; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDELAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
2443780..2445780                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1986_RS11920; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQHLMPTLSAPWFYRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHDWCGVTQLGWDEKSQQKIAQMLSLALPAELASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFMSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDAKWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAAPAPVYPGLFVLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK

#### region 4 ####
2720069..2720080                   attL                                                                                 N/A                 TGTTAATGCGTT
complement(2724291..2725652)       PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; STho1986_RS13150; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarThompsonMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
2725818..2726609                   PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1986_RS13155; phage(gi100056)     4.09e-172           SalmonellaentericasubspentericaserovarThompsonMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS
2726629..2727915                   PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1986_RS13160; phage(gi100055)     0.0                 SalmonellaentericasubspentericaserovarThompsonMEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
2728036..2728641                   hypothetical protein; STho1986_RS13165                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMSEDYVIEWDKNFADDLNVVANVFLSHNPTLWPTIFSQLSTQPEIFEDEDEDEYGLQDVLDCSGGDLGNNELAQAFLQVLRGEGFIHLVDWKGEDEEGELANFAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRGFQIFDLNEGSDTYNVVVLPMSEYKKIEDFNTPWLEVQDFLS
complement(2728676..2729266)       PHAGE_Escher_500465_1_NC_049342: tail assembly protein; STho1986_RS13170; phage(gi100053)     1.76e-53            SalmonellaentericasubspentericaserovarThompsonMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
2729390..2730268                   PHAGE_Escher_500465_1_NC_049342: hypothetical protein; STho1986_RS13175; phage(gi100051)     0.0                 SalmonellaentericasubspentericaserovarThompsonMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCAQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQERQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF
2730354..2732015                   PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; STho1986_RS13180; phage(gi100050)     0.0                 SalmonellaentericasubspentericaserovarThompsonMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
2732164..2732502                   PHAGE_Escher_500465_1_NC_049342: recombination protein; STho1986_RS13185; phage(gi100049)     1.88e-73            SalmonellaentericasubspentericaserovarThompsonMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
complement(2732668..2732958)       PHAGE_Escher_500465_1_NC_049342: exonuclease; STho1986_RS13190; phage(gi100048)      7.89e-55            SalmonellaentericasubspentericaserovarThompsonMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR
complement(2732948..2733385)       PHAGE_Escher_500465_1_NC_049342: primase; STho1986_RS13195; phage(gi100047)          3.01e-97            SalmonellaentericasubspentericaserovarThompsonMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG
2733574..2734056                   PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; STho1986_RS13200; phage(gi100046)     1.78e-110           SalmonellaentericasubspentericaserovarThompsonMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
2734671..2746145                   PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; STho1986_RS13205; phage(gi100051)     6.19e-10            SalmonellaentericasubspentericaserovarThompsonMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGVSHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGEAEAGSIITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDSTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWRFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLSPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVPTFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEIFDNGVSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASPAESFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTTSPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESLSFTLRVDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGAIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSSVFSVTLDTQPPAQPDAPLISDNVTPVIGNIGNNGATNDATPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLAVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGTWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFINGDSAGFATVDASGNWIFEITTPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNSASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTAIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGWVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGNTLLGVTSANAGGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTSALGQGSHAYSVSAADAAGNVSAASPSTTIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGQAEANSTVTVTLAGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQSYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVEKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVAPTGALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG
2746210..2747619                   TolC family outer membrane protein; STho1986_RS13210                                 N/A                 SalmonellaentericasubspentericaserovarThompsonMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDGIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLIEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
2747616..2749796                   PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; STho1986_RS13215; phage(gi9630145)     1.13e-24            SalmonellaentericasubspentericaserovarThompsonMTRAAPDVEEVLSERALSQWAQAISHVAGHYRVACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRGGQLLVIEHVNGEDAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
2749804..2750967                   HlyD family type I secretion periplasmic adaptor subunit; STho1986_RS13220           N/A                 SalmonellaentericasubspentericaserovarThompsonMDDPDIQRERAFSGAGRIVLICSLLFLIFGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
2751039..2751401                   tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
2751597..2752793                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STho1986_RS13225; phage(gi16130540)     1.59e-173           SalmonellaentericasubspentericaserovarThompsonMARTTRSLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGIRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRPLEKDVFPAIGEIPVQQIKARTLIEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSVSTCCFIEWQLLTLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVLLSPQALEILDVMKPISAHREHVFPSRNDPKQAMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGFSPDIIEAALAHSDKNEVRRAYNRSTYLEQRKDLMSWWGLFVNKTIK
2762029..2762040                   attR                                                                                 N/A                 TGTTAATGCGTT

#### region 5 ####
complement(4263597..4264325)       PHAGE_Escher_RCS47_NC_042128: nicotinamide mononucleotide transporter; STho1986_RS20470; phage(gi100101)     1.43e-38            SalmonellaentericasubspentericaserovarThompsonMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTVKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4264522..4264811)       hypothetical protein; STho1986_RS20475                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFYFGGVWQMRCISMVQKNRKKLDYRLIASIPNLELISWEQKGEIRSLPSQLLFYISPWKYAA
complement(4265064..4265519)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STho1986_RS20485; phage(gi418489075)     4.70e-27            SalmonellaentericasubspentericaserovarThompsonMSQTTVWLACYKGRSEYRGIARFVDWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEAFFRKHNGKRYDWQGALGIALYNRERKDKLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4265516..4266121)       DUF4376 domain-containing protein; STho1986_RS20490                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMTKYVYYHPSTFEVIDWIDDTSLNVVLPESIKPVNDEQWKLRGKPCWICLAPFSFITTPPPGEFYQLVGDKWIYNPTAFNDALVNKKENVVLSIKAHRDTVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAKQIPAGLMWQTKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALGDIEAVLDYDYSSGWQP
complement(4266126..4267895)       PHAGE_Escher_520873_NC_049344: holin; STho1986_RS20495; phage(gi100034)              6.64e-88            SalmonellaentericasubspentericaserovarThompsonMYNEFYTLLTDWGMAKIASALADKKQIHLQKMAVGDGGGQYYEPTASQTNLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVQLSSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKASAAAPASHTHAWGQITGTPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAMDKANAALNLANTAASNGPRYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGCSPAPDKTNTFSAGRGGDHGELKIAIIGVTSKKTYTVSVGAGGSGGGGGFVPSYEDRTSIGPNGQGHTLFKGDAGEPGLDGGDSSFINISAKGGLGSSGKIAEFTSTESYPGGVGVGSAFGTGGSAAAFANGGNADGYGAGGGGGASLNQNTRSAISGYSGGRGSDGFVKISW
complement(4267898..4268530)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STho1986_RS20500; phage(gi48696961)             3.03e-31            SalmonellaentericasubspentericaserovarThompsonMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAGQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4268523..4269638)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STho1986_RS20505; phage(gi48696960)             1.46e-131           SalmonellaentericasubspentericaserovarThompsonMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVATGESGNNWQPAQISALVDRVGNYDLSVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVPYQIRARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4269629..4269988)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STho1986_RS20510; phage(gi48696959)             5.02e-43            SalmonellaentericasubspentericaserovarThompsonMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
complement(4270152..4271699)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STho1986_RS20515; phage(gi221328637)     1.05e-61            SalmonellaentericasubspentericaserovarThompsonMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4271699..4272628)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STho1986_RS20520; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYDVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4272625..4272987)       PHAGE_Entero_SfV_NC_003444: putative flippase; STho1986_RS20525; phage(gi19549013)     7.17e-60            SalmonellaentericasubspentericaserovarThompsonMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVTGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4273315..4274037)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STho1986_RS20530; phage(gi48696958)             3.31e-39            SalmonellaentericasubspentericaserovarThompsonMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKERTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEASHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGIGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4274047..4275090)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STho1986_RS20535; phage(gi48696957)     6.90e-102           SalmonellaentericasubspentericaserovarThompsonMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSAGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYIIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDISHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKAPARGSATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSMMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4275078..4275287)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STho1986_RS20540; phage(gi48696956)             2.44e-22            SalmonellaentericasubspentericaserovarThompsonMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPKLPPWLR
complement(4275287..4276240)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STho1986_RS20545; phage(gi48696955)             3.24e-50            SalmonellaentericasubspentericaserovarThompsonMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVSDSWFDELMSAVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTISAIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4276240..4278594)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STho1986_RS20550; phage(gi48696954)             3.94e-58            SalmonellaentericasubspentericaserovarThompsonMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKITRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSAAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQVAMKNAPDAGAAAANFDHFLKSTFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMAHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMTEKFNLGAMFGDAQTRDFLAPMLANMVEYRQLKASAMQAAGQHFIDDDFAVKMTSPGEQTKALQLSLNDLWLTVGMELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVGVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKGLTVLLGNGLIKGLRLVGQAFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFASVLDWFGIELPASFSEFGGNILDSLINGILNALPFLNGAIEKIKALIPDWAKSALGISTEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTIASPQPMKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4278691..4278819)       GpE family phage tail protein; STho1986_RS23845                                      N/A                 SalmonellaentericasubspentericaserovarThompsonMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4278779..4279096)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STho1986_RS20555; phage(gi48696951)             6.77e-10            SalmonellaentericasubspentericaserovarThompsonMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQAMLSMATEPTATVAGNGAAGEVVSFSAQ
complement(4279148..4279672)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STho1986_RS20560; phage(gi48696950)             8.93e-90            SalmonellaentericasubspentericaserovarThompsonMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4279672..4281099)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STho1986_RS20565; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarThompsonMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4281089..4281286)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STho1986_RS20570; phage(gi48696948)             3.53e-11            SalmonellaentericasubspentericaserovarThompsonMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4281283..4281738)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STho1986_RS20575; phage(gi48696947)             4.28e-15            SalmonellaentericasubspentericaserovarThompsonMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4281899..4282213)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STho1986_RS20580; phage(gi48696935)             2.40e-28            SalmonellaentericasubspentericaserovarThompsonMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEVARRESEAGWSRLEREFLEFRADLPLHYVRRDDYLRGQAVLEAKLDALYSKIELIQRGNL
complement(4282226..4282831)       PHAGE_Pseudo_B3_NC_006548: endolysin; STho1986_RS20585; phage(gi56692593)            6.26e-72            SalmonellaentericasubspentericaserovarThompsonMRYQYVCLVCAMTFLSADAAEPPRASLPWRNELIRTAREIWGLNAPVADFAGQLHQESGWAPDARSPAGAQGMAQFMPATAKWVSQLYPELRENKPFNPSWAIRALVQYDHQLWKSLPAKDNCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPEAILYQHASRYLQWGQASCLY
complement(4282834..4283121)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STho1986_RS20590; phage(gi48696931)             5.57e-14            SalmonellaentericasubspentericaserovarThompsonMRKIIVPRLSGWLIASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4283698..4284045                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STho1986_RS20595; phage(gi48696911)             3.52e-30            SalmonellaentericasubspentericaserovarThompsonMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
