gi|00000000|ref|NZ_CP012513.1|  Salmonella enterica subsp. enterica serovar Thompson strain RM1984 4708710, gc%: 52.25%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1058867..1060069)       PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; STho1984_RS04940; phage(gi100242)     4.88e-49            SalmonellaentericasubspentericaserovarThompsonMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPDQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLPKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVRKAS
1060215..1060229                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1060264..1061556)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STho1984_RS04945; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarThompsonMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
complement(1061601..1061849)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STho1984_RS04950; phage(gi169257269)     2.25e-55            SalmonellaentericasubspentericaserovarThompsonMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1061890..1062129)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS04955; phage(gi169257264)     1.91e-52            SalmonellaentericasubspentericaserovarThompsonMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1062172..1063329)       PHAGE_Phage_Gifsy_1_NC_010392: RecT; STho1984_RS04960; phage(gi169257263)            0.0                 SalmonellaentericasubspentericaserovarThompsonMCAALKRCAYRHKGKIMENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAAMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(1063292..1066219)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; STho1984_RS04965; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSFTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDVHKVVNAIKKVFPVDGKTPELATVIQFLKTWFETEHIDRSLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPGLVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAAVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1066346..1066696)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS04970; phage(gi169257261)     1.01e-81            SalmonellaentericasubspentericaserovarThompsonMKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVEAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1066718..1066888)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS24690; phage(gi169257260)     7.35e-14            SalmonellaentericasubspentericaserovarThompsonMHNQKTCAYHLCGKTIEQGKEVKNELTLIRGAQLTHEERDYCSVRCASYDQMAHES
1067285..1067491                   PHAGE_Entero_HK225_NC_019717: hypothetical protein; STho1984_RS04980; phage(gi428782417)     1.60e-24            SalmonellaentericasubspentericaserovarThompsonMDRDELEEDRAAFIAGEIGGAVVELIIDGVVINRDAIVERLEEKRRAVGNVIHKGVLRDAAAMVRKGQ
complement(1067518..1068459)       PHAGE_Lister_vB_LmoS_188_NC_028871: hypothetical protein; STho1984_RS04985; phage(gi971750825)     3.53e-30            SalmonellaentericasubspentericaserovarThompsonMDAGSDSETNDMKFRIVYDGPALETHEMNVRDLAPALLSLSDALEEAGKTVYGNKTVVSVKVNASFKAGSFGIDLIASSTSWIKQAVDFFSGDTATAAANLIALIGFCPGPREKICKGLIQLVKWIGPREIKKLHNLPDSNVEVFVDDDSEIFDSKVIELYRNIKLRSSLQEVISKPLEQEGIDSFASTVDDGLTFMTIDKQEAHYFKVELPAESIISESTVEKALQIKNISFNEGSRWRFSDGSSSFLAEIKDQKFISDIDNNTLNFSKGDMLLVDLKVTQYMIGDAIKTTFEIEHVKKQLNPQRQIDLPFE
complement(1068565..1068960)       PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STho1984_RS04990; phage(gi435439303)     7.20e-66            SalmonellaentericasubspentericaserovarThompsonMRKNTHQTDNPQVRRLNEIIEKKRISKADIARICGVSAQSVNNWFVRGAIGKSSAIKLADALGVSLEWVLGQDVDAKDGLRHDERRLLELYNQLPNEEEQQNMLRIVSLRLKELDELYAKYMGRRIKGDAE
1069065..1069301                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; STho1984_RS04995; phage(gi169257257)     8.89e-15            SalmonellaentericasubspentericaserovarThompsonMNALEKAIQVAGNSSKLAEKLGVSSMTISHWKKRYGGVVPKGRVFPIFHVTGITPHELRPDMYPNPTDGLPSQEASAK
1069267..1069641                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; STho1984_RS05000; phage(gi169257256)     1.22e-86            SalmonellaentericasubspentericaserovarThompsonMDYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1069726..1070709                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; STho1984_RS05005; phage(gi169257255)     0.0                 SalmonellaentericasubspentericaserovarThompsonMSMSNTAEIYKFPAPVPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1070712..1071461                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; STho1984_RS05010; phage(gi169257254)     1.05e-178           SalmonellaentericasubspentericaserovarThompsonMKNVIGTGSALDRLKRIIPASVQPKFSTADEWRTWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRGCTFANYEVNGDGQRKAFTMAKSYAQNFGAGFASFVFSGGPGTGKNHLAAAIGNHLLASGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGALTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWGSYRKNVSHLRIVK
1071472..1071819                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05015; phage(gi169257253)     7.09e-72            SalmonellaentericasubspentericaserovarThompsonMARPKTHSERMIILERIIGLVKEQGRITTNDVVAMFGVHRTTAEKYLQIALVRGGFIRHGRCGVFRDQRAVIDYDLKRYSCNKTTGFSALPALEKSQVMQVYGASKMSINKGGAQ
1071816..1072136                   PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; STho1984_RS05020; phage(gi423262430)     2.37e-36            SalmonellaentericasubspentericaserovarThompsonMSNIDKQALLGADKHANQHRLSRLIIEANSAELRAIAEAVEQYTDQLIAALADSEKRIAELESKLSKPVLLPKTNGYWTEQEKAYEEAITLAKRQVRLAGFSVEDM
1072136..1072381                   PHAGE_Entero_ES18_NC_006949: gp40; STho1984_RS05025; phage(gi62362253)               4.85e-44            SalmonellaentericasubspentericaserovarThompsonMAIFMEVRCEGLGDIDGCFSSQNAGSITSARESVKSVSIALKFLKDDSLNNGWVLHKGELYCPVCAKAKALAAAGIKWKAE
1072692..1073909                   PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; STho1984_RS05030; phage(gi410491517)     4.11e-156           SalmonellaentericasubspentericaserovarThompsonMTDTAYSKSLEKEVDPEQYLVLTGHTIDTIHTFAREDIVCPICEATGGTFVRGGTNARFNRRAHFRFRNTKDKSNHHPSCDFYDERISPDVKNHLVYFSTDRTKITHVIRKMVCAGIQEGFFDQESMRQMRKWFFQKRVDSTFKLSLTEEQVSWLHYITDNTSVNWGYVNGVAPFSPVQATIPGFSWEDAIQREFTLVHLPTLRKLQDLKVWRKQLSMLTKFVSSPSQGVLIDPTLLKDEYEKTLQLNAFIISSYDEFKNKSVRDRADGEVKLLAFSALLLFVSGWDINQAIEKFAVIANVDEVYDDLAGNFIGLNPYLKFELADTARKLQENWPIEYKEINYWQVEKRMRAMYEEDQKSRSTPLPPLPADIYITEHLKRKEEEERVRRWLEADRIEFDNDITEE
1073890..1073958                   DUF551 domain-containing protein; STho1984_RS24420                                   N/A                 SalmonellaentericasubspentericaserovarThompsonMILPRSEITHWMQLPEPPQEVE
1074052..1074378                   hypothetical protein; STho1984_RS05035                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMKPKKLNAKQQYQLDLELVKKKPANRTEAKAHLAAQLRISKYKLQTSSKIRVGSFRGRKKVHFSKAEEDARAALNKANAIRFSEGEVESVDTDRISKSNKRWRGRTAD
1074626..1074859                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; STho1984_RS05040; phage(gi169257250)     2.75e-50            SalmonellaentericasubspentericaserovarThompsonMRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
1074976..1075224                   PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STho1984_RS22945; phage(gi435439314)     3.96e-52            SalmonellaentericasubspentericaserovarThompsonMSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
1075259..1075861                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STho1984_RS05045; phage(gi169257248)     1.42e-144           SalmonellaentericasubspentericaserovarThompsonMAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRIFRTQREAENAAAQLMSFAG
1076070..1076681                   PHAGE_Phage_Gifsy_1_NC_010392: NinG; STho1984_RS05055; phage(gi169257246)            1.04e-146           SalmonellaentericasubspentericaserovarThompsonMAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1076678..1076824                   PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STho1984_RS05060; phage(gi169257245)     4.31e-12            SalmonellaentericasubspentericaserovarThompsonMKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
1076814..1077611                   PHAGE_Salmon_SEN34_NC_028699: putative antitermination protein; STho1984_RS05065; phage(gi966201477)     0.0                 SalmonellaentericasubspentericaserovarThompsonMNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRLLAEQRAERHGALRKMEEGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
1078010..1078135                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STho1984_RS05070; phage(gi169257292)     1.23e-22            SalmonellaentericasubspentericaserovarThompsonMKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(1078271..1078720)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STho1984_RS05075; phage(gi169257293)     3.59e-107           SalmonellaentericasubspentericaserovarThompsonMKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1079081..1079767)       PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STho1984_RS05080; phage(gi169257241)     3.36e-160           SalmonellaentericasubspentericaserovarThompsonMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVERWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1080043..1080372                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; STho1984_RS05085; phage(gi169257240)     1.57e-73            SalmonellaentericasubspentericaserovarThompsonMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1080356..1080808                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STho1984_RS05090; phage(gi169257239)     1.80e-103           SalmonellaentericasubspentericaserovarThompsonMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1080826..1081275                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STho1984_RS05095; phage(gi169257238)     1.72e-89            SalmonellaentericasubspentericaserovarThompsonMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCSVPTRTETASTSRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYIRTQCLK
1081604..1082107                   hypothetical protein; STho1984_RS05100                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMRRILATAAALCLGGCITVYGPVKTGGQQQQDSQSGQQPGMSEQISTSFIGNRKPDELLNAVALYFREKAITASVNDQTTGIIAGTGDDPELSSLYLDCSLLPQTQNIQEHYRIVAQVWSAGEGSNVSVMVTGTAGLDTADGNDKVKPVECKSTGIFEKDLQERLRK
complement(1082364..1082765)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05105; phage(gi169257237)     1.65e-91            SalmonellaentericasubspentericaserovarThompsonMKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGIGDSVDLSRYSSELDGNGQYTLPASGKYELRVLQTRNEARKNKAKKYSVNIQIK
1083051..1083596                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STho1984_RS05110; phage(gi169257236)     2.91e-115           SalmonellaentericasubspentericaserovarThompsonMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1083568..1085499                   PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STho1984_RS05115; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarThompsonMISGERRANNANRAITNGLIALHIPVPLTTVQWADKYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFHVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
1085483..1085686                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STho1984_RS05120; phage(gi169257234)     6.44e-42            SalmonellaentericasubspentericaserovarThompsonMATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
1085683..1087263                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STho1984_RS05125; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
1087253..1088749                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STho1984_RS05130; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarThompsonMQRNLPHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPTDTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
1088762..1089109                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STho1984_RS05135; phage(gi169257231)     3.50e-78            SalmonellaentericasubspentericaserovarThompsonMSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
1089164..1090192                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STho1984_RS05140; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarThompsonMGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
1090250..1090615                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STho1984_RS05145; phage(gi169257229)     8.46e-78            SalmonellaentericasubspentericaserovarThompsonMATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
1090626..1091003                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STho1984_RS05150; phage(gi169257228)     6.32e-82            SalmonellaentericasubspentericaserovarThompsonMSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGEPPTDNRRRTGGMFERA
1090990..1091568                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STho1984_RS05155; phage(gi169257227)     1.45e-135           SalmonellaentericasubspentericaserovarThompsonMKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
1091565..1091966                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STho1984_RS05160; phage(gi169257225)     4.01e-93            SalmonellaentericasubspentericaserovarThompsonMSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1091974..1092720                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STho1984_RS05165; phage(gi169257224)     2.48e-173           SalmonellaentericasubspentericaserovarThompsonMMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGEAGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
1092771..1093166                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STho1984_RS05170; phage(gi169257223)     3.47e-93            SalmonellaentericasubspentericaserovarThompsonMFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
1093163..1093501                   PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STho1984_RS05175; phage(gi169257222)     2.45e-77            SalmonellaentericasubspentericaserovarThompsonMNRELAFVMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
1093473..1096568                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STho1984_RS05180; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarThompsonMDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAVAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTSTQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARGRKTPWTVSSSQTEYDQQQLNELKEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQLAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
1096571..1096900                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STho1984_RS05185; phage(gi169257220)     5.05e-76            SalmonellaentericasubspentericaserovarThompsonMETFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSISVGSLWVTVTTTFEQVVI
1096910..1097608                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STho1984_RS05190; phage(gi169257219)     1.49e-170           SalmonellaentericasubspentericaserovarThompsonMQDISQDTLNEAAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGQKYDVYPVEGSGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQSGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
1097615..1098352                   PHAGE_Entero_mEp460_NC_019716: tail fiber component; STho1984_RS05195; phage(gi428782332)     2.57e-154           SalmonellaentericasubspentericaserovarThompsonMKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCADQVHKFRCVPHLTGRQFKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWREFAFTGICNDFAAASACR
1098250..1098897                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STho1984_RS05200; phage(gi169257217)     1.65e-153           SalmonellaentericasubspentericaserovarThompsonMATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGMAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNMLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
1098959..1102321                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STho1984_RS05205; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarThompsonMGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLHSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGKALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGIKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTEASVWPLVMVSRSGSNFTN
1102360..1102602                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STho1984_RS05210; phage(gi169257215)     9.09e-52            SalmonellaentericasubspentericaserovarThompsonMTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
1102656..1105151                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STho1984_RS05215; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarThompsonMPVLISGVLKDGTGTPIQNCTIQLKASRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATVAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASVTAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMIEAQTKAPLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETISRATGAMQKDQNLNDVPDKALARQSLQLGNSATLNVGTTLGTVAAGDDIRISSAKRAIDDTQTGLAEQPVMWISSADDLSNLPSGARRFASNKAPATILPVNDYVFLEVIAKRDCANGCVVQITDSAGNTWTGIRYDATNGSSFTWRPLMSCPPGVPLPWPSDTIPAGYALMQGQTFDKSAYPLLAVAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1105151..1105732                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STho1984_RS05220; phage(gi169257321)     5.64e-134           SalmonellaentericasubspentericaserovarThompsonMTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDSKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDIATDDEKAQLDEWKKYRILVNRVDTTNPDWPEVPVNQ
complement(1106562..1108052)       PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STho1984_RS05225; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarThompsonMTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFPEILCAELPYKLDKLDLQNCPFLPLMKMLPEGLKELSIELIQTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIVWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDALSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGTFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNGV
1108442..1108591                   PHAGE_Escher_500465_1_NC_049342: hypothetical protein; STho1984_RS22955; phage(gi100035)     3.16e-13            SalmonellaentericasubspentericaserovarThompsonSQEQWAQAGRLIGAGVPRQQVAIIYDVGVSTLYRKFPASNMPLMPFMGK
1110408..1110422                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 2 ####
1922812..1923234                   PHAGE_Entero_HK022_NC_002166: integrase; STho1984_RS09320; phage(gi9634144)          3.37e-29            SalmonellaentericasubspentericaserovarThompsonQFSHIIDERLYVKQIKTGMKIALPLSLNLPSMDLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPDSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKIYLDGRDEKAYMML
1923291..1923307                   attL                                                                                 N/A                 GAATACAGAAATTCGGA
1924318..1925232                   DMT family transporter; STho1984_RS09330                                             N/A                 SalmonellaentericasubspentericaserovarThompsonMRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
1925365..1925523                   hypothetical protein; STho1984_RS09335                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1925533..1926147                   disulfide bond formation protein B; STho1984_RS09340                                 N/A                 SalmonellaentericasubspentericaserovarThompsonMKTHHHPTTLVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1926474..1926620)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STho1984_RS24145; phage(gi100036)     5.64e-17            SalmonellaentericasubspentericaserovarThompsonIGGRRPKLTPEQWAQAGYLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
1926635..1926781                   hypothetical protein; STho1984_RS24695                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGIVKPDVDHLHQG
complement(1927295..1927420)       hypothetical protein; STho1984_RS09345                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
complement(1927387..1927617)       hypothetical protein; STho1984_RS24470                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMFRTEIAADPDRRLDAIVFTLYLRPQVHFLSKPGRTVALFCLAEGLSYDIVAVLPELLVGINDCAPCLPMPIPNSF
1927988..1928188                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STho1984_RS09350; phage(gi169257211)     6.49e-41            SalmonellaentericasubspentericaserovarThompsonMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPADIPFPEDWFKMCRGY
complement(1928285..1929166)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STho1984_RS09355; phage(gi169257205)     7.31e-89            SalmonellaentericasubspentericaserovarThompsonMYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDGVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1929324..1929584)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STho1984_RS09360; phage(gi169257184)     7.50e-56            SalmonellaentericasubspentericaserovarThompsonMDGELKNLKCNICQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1929892..1930059                   lytic enzyme; STho1984_RS09370                                                       N/A                 SalmonellaentericasubspentericaserovarThompsonMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1930316..1930849)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STho1984_RS09375; phage(gi16765210)     1.59e-123           SalmonellaentericasubspentericaserovarThompsonMNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1930903..1931094)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STho1984_RS09380; phage(gi169257182)     2.52e-37            SalmonellaentericasubspentericaserovarThompsonIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFLTKGCLKYSGDLVRVTQIINGG
1931083..1932234                   PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; STho1984_RS24150; phage(gi327198600)     4.80e-50            SalmonellaentericasubspentericaserovarThompsonGNPDLRRTWCESFLAVHGVRDPDWYEYVPDNPPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEEKQPAAEPEVVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDDIQPGIYYDIPNEAYHAGQGVSKSQLDDIVDTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGITVLTAEEGRKIEFMYQSVMA
1932267..1933346                   PHAGE_Entero_HK022_NC_002166: integrase; STho1984_RS09390; phage(gi9634144)          8.75e-93            SalmonellaentericasubspentericaserovarThompsonMSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKKTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRTAAEHLPVWFPLAMDLALVTGQRREDIVNMKFSDVVDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1933413..1933429                   attR                                                                                 N/A                 GAATACAGAAATTCGGA
complement(1933729..1934082)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STho1984_RS09400; phage(gi971764937)     1.42e-11            SalmonellaentericasubspentericaserovarThompsonMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPYNS
complement(1934099..1934974)       copper homeostasis membrane protein CopD; STho1984_RS09405                           N/A                 SalmonellaentericasubspentericaserovarThompsonMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMCMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1934975..1935349)       CopC domain-containing protein YobA; STho1984_RS09410                                N/A                 SalmonellaentericasubspentericaserovarThompsonMASSARSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1935487..1935717                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STho1984_RS09415; phage(gi422936677)     1.18e-22            SalmonellaentericasubspentericaserovarThompsonMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1935825..1936481                   carbon-nitrogen hydrolase family protein; STho1984_RS09420                           N/A                 SalmonellaentericasubspentericaserovarThompsonMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1936505..1937203                   PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; STho1984_RS09425; phage(gi100273)     5.11e-18            SalmonellaentericasubspentericaserovarThompsonMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 3 ####
2444209..2445210                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11910; phage(gi100039)     1.03e-128           SalmonellaentericasubspentericaserovarThompsonMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVERETDELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS
complement(2445207..2446385)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11915; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarThompsonMTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPIKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRILFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG
complement(2446565..2446939)       PHAGE_Pseudo_FHA0480_NC_041851: hypothetical protein; STho1984_RS11920; phage(gi100005)     1.60e-05            SalmonellaentericasubspentericaserovarThompsonMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKAGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFLFDDTPPR
2447112..2447360                   PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; STho1984_RS11925; phage(gi985760910)     9.13e-25            SalmonellaentericasubspentericaserovarThompsonMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYDDMQIKNDADIAE
2447529..2447897                   PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; STho1984_RS11930; phage(gi311992945)     2.87e-08            SalmonellaentericasubspentericaserovarThompsonMSWDKRVAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTAIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGTEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
2447897..2448415                   YbjP/YqhG family protein; STho1984_RS11935                                           N/A                 SalmonellaentericasubspentericaserovarThompsonMNTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNPPDDTTALMQRYVAKEVILRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLGTESTPIHLEVYTRWEEGRWKIYRVRDADRGYEQPIYDAGAITQAEAWSAKVAPEYKKH
complement(2448482..2449138)       CPBP family intramembrane metalloprotease; STho1984_RS11940                          N/A                 SalmonellaentericasubspentericaserovarThompsonMPTNTLDKIRHSLSCVAVLFGLFGIFVFASFSPSYAWLYLGGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNAFSGPEPWMAELSRQFFLHKFLNTLAMCFLAPVAEEIIFRGFLLNSSIGWGRYSRASGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPITLHILNNAWVVFGLLFSATE
complement(2449236..2450450)       PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; STho1984_RS11945; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDELAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
2450610..2452610                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; STho1984_RS11950; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDSFRSAHPQATLQRLHFISFEKFPLTRDDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAWFLDGFAPAKNPDMWTPNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQHLMPTLSAPWFYRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHDWCGVTQLGWDEKSQQKIAQMLSLALPAELASALNAEEAEQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFMSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDAKWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAAPAPVYPGLFVLGALGSRGLCSAPLCAEILAAQMSNEPIPLDAGTLAALNPNRLWVRKLLKGKAVK

#### region 4 ####
2726710..2726721                   attL                                                                                 N/A                 TGTTAATGCGTT
complement(2730932..2732293)       PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; STho1984_RS13180; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarThompsonMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
2732459..2733250                   PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1984_RS13185; phage(gi100056)     4.09e-172           SalmonellaentericasubspentericaserovarThompsonMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS
2733270..2734556                   PHAGE_Escher_500465_1_NC_049342: minor tail protein; STho1984_RS13190; phage(gi100055)     0.0                 SalmonellaentericasubspentericaserovarThompsonMEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
2734677..2735282                   hypothetical protein; STho1984_RS13195                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMSEDYVIEWDKNFADDLNVVANVFLSHNPTLWPTIFSQLSTQPEIFEDEDEDEYGLQDVLDCSGGDLGNNELAQAFLQVLRGEGFIHLVDWKGEDEEGELANFAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRGFQIFDLNEGSDTYNVVVLPMSEYKKIEDFNTPWLEVQDFLS
complement(2735317..2735907)       PHAGE_Escher_500465_1_NC_049342: tail assembly protein; STho1984_RS13200; phage(gi100053)     1.76e-53            SalmonellaentericasubspentericaserovarThompsonMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
2736031..2736909                   PHAGE_Escher_500465_1_NC_049342: hypothetical protein; STho1984_RS13205; phage(gi100051)     0.0                 SalmonellaentericasubspentericaserovarThompsonMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCAQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQERQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF
2736995..2738656                   PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; STho1984_RS13210; phage(gi100050)     0.0                 SalmonellaentericasubspentericaserovarThompsonMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
2738805..2739143                   PHAGE_Escher_500465_1_NC_049342: recombination protein; STho1984_RS13215; phage(gi100049)     1.88e-73            SalmonellaentericasubspentericaserovarThompsonMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
complement(2739309..2739599)       PHAGE_Escher_500465_1_NC_049342: exonuclease; STho1984_RS13220; phage(gi100048)      7.89e-55            SalmonellaentericasubspentericaserovarThompsonMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR
complement(2739589..2740026)       PHAGE_Escher_500465_1_NC_049342: primase; STho1984_RS13225; phage(gi100047)          3.01e-97            SalmonellaentericasubspentericaserovarThompsonMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG
2740215..2740697                   PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; STho1984_RS13230; phage(gi100046)     1.78e-110           SalmonellaentericasubspentericaserovarThompsonMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
2741312..2752786                   PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; STho1984_RS13235; phage(gi100051)     6.19e-10            SalmonellaentericasubspentericaserovarThompsonMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGVSHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGEAEAGSIITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDSTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWRFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLSPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVPTFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGKPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEIFDNGVSLGLATLQPNGAWTFTPSQNLGEGAHRLTVIATDAKGNASPAESFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTTSPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVADGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESLSFTLRVDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGAIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSSVFSVTLDTQPPAQPDAPLISDNVTPVIGNIGNNGATNDATPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSIITLYNGSSVLGVVTVDETGTWTLAVTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGTWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTVQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFINGDSAGFATVDASGNWIFEITTPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNSASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTAIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGWVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGNTLLGVTSANAGGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTSALGQGSHAYSVSAADAAGNVSAASPSTTIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGQAEANSTVTVTLAGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPVLPLAARDNITSLDLTSTAVTSTQSYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVEKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVAPTGALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGVDRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGAGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG
2752851..2754260                   TolC family outer membrane protein; STho1984_RS13240                                 N/A                 SalmonellaentericasubspentericaserovarThompsonMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDGIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLIEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
2754257..2756437                   PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; STho1984_RS13245; phage(gi9630145)     1.13e-24            SalmonellaentericasubspentericaserovarThompsonMTRAAPDVEEVLSERALSQWAQAISHVAGHYRVACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRGGQLLVIEHVNGEDAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
2756445..2757608                   HlyD family type I secretion periplasmic adaptor subunit; STho1984_RS13250           N/A                 SalmonellaentericasubspentericaserovarThompsonMDDPDIQRERAFSGAGRIVLICSLLFLIFGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
2757680..2758042                   tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
2758238..2759434                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STho1984_RS13255; phage(gi16130540)     1.59e-173           SalmonellaentericasubspentericaserovarThompsonMARTTRSLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGIRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRPLEKDVFPAIGEIPVQQIKARTLIEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMHSLVMSNLSVSTCCFIEWQLLTLVRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVLLSPQALEILDVMKPISAHREHVFPSRNDPKQAMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGFSPDIIEAALAHSDKNEVRRAYNRSTYLEQRKDLMSWWGLFVNKTIK
2768669..2768680                   attR                                                                                 N/A                 TGTTAATGCGTT

#### region 5 ####
complement(4270730..4271458)       PHAGE_Escher_RCS47_NC_042128: nicotinamide mononucleotide transporter; STho1984_RS20495; phage(gi100101)     1.43e-38            SalmonellaentericasubspentericaserovarThompsonMIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTVKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4271655..4271944)       hypothetical protein; STho1984_RS20500                                               N/A                 SalmonellaentericasubspentericaserovarThompsonMDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFYFGGVWQMRCISMVQKNRKKLDYRLIASIPNLELISWEQKGEIRSLPSQLLFYISPWKYAA
complement(4272197..4272652)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STho1984_RS20510; phage(gi418489075)     4.70e-27            SalmonellaentericasubspentericaserovarThompsonMSQTTVWLACYKGRSEYRGIARFVDWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEAFFRKHNGKRYDWQGALGIALYNRERKDKLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4272649..4273254)       DUF4376 domain-containing protein; STho1984_RS20515                                  N/A                 SalmonellaentericasubspentericaserovarThompsonMTKYVYYHPSTFEVIDWIDDTSLNVVLPESIKPVNDEQWKLRGKPCWICLAPFSFITTPPPGEFYQLVGDKWIYNPTAFNDALVNKKENVVLSIKAHRDTVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAKQIPAGLMWQTKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALGDIEAVLDYDYSSGWQP
complement(4273259..4275028)       PHAGE_Escher_520873_NC_049344: holin; STho1984_RS20520; phage(gi100034)              6.64e-88            SalmonellaentericasubspentericaserovarThompsonMYNEFYTLLTDWGMAKIASALADKKQIHLQKMAVGDGGGQYYEPTASQTNLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVQLSSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKASAAAPASHTHAWGQITGTPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAMDKANAALNLANTAASNGPRYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGCSPAPDKTNTFSAGRGGDHGELKIAIIGVTSKKTYTVSVGAGGSGGGGGFVPSYEDRTSIGPNGQGHTLFKGDAGEPGLDGGDSSFINISAKGGLGSSGKIAEFTSTESYPGGVGVGSAFGTGGSAAAFANGGNADGYGAGGGGGASLNQNTRSAISGYSGGRGSDGFVKISW
complement(4275031..4275663)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STho1984_RS20525; phage(gi48696961)             3.03e-31            SalmonellaentericasubspentericaserovarThompsonMDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAGQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4275656..4276771)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STho1984_RS20530; phage(gi48696960)             1.46e-131           SalmonellaentericasubspentericaserovarThompsonMAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVATGESGNNWQPAQISALVDRVGNYDLSVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVPYQIRARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4276762..4277121)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STho1984_RS20535; phage(gi48696959)             5.02e-43            SalmonellaentericasubspentericaserovarThompsonMNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
complement(4277285..4278832)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STho1984_RS20540; phage(gi221328637)     1.05e-61            SalmonellaentericasubspentericaserovarThompsonMNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4278832..4279761)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STho1984_RS20545; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarThompsonMKISLVVPVFNEEDAIPIFYKTVREYSSLKPYDVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4279758..4280120)       PHAGE_Entero_SfV_NC_003444: putative flippase; STho1984_RS20550; phage(gi19549013)     7.17e-60            SalmonellaentericasubspentericaserovarThompsonMIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVTGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4280448..4281170)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STho1984_RS20555; phage(gi48696958)             3.31e-39            SalmonellaentericasubspentericaserovarThompsonMKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKERTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEASHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGIGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4281180..4282223)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STho1984_RS20560; phage(gi48696957)     6.90e-102           SalmonellaentericasubspentericaserovarThompsonMAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSAGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYIIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDISHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKAPARGSATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSMMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4282211..4282420)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STho1984_RS20565; phage(gi48696956)             2.44e-22            SalmonellaentericasubspentericaserovarThompsonMRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPKLPPWLR
complement(4282420..4283373)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STho1984_RS20570; phage(gi48696955)             3.24e-50            SalmonellaentericasubspentericaserovarThompsonMYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVSDSWFDELMSAVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTISAIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4283373..4285727)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STho1984_RS20575; phage(gi48696954)             4.19e-58            SalmonellaentericasubspentericaserovarThompsonMANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKITRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSAAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQVAMKNAPDAGAAAANFDHFLKSTFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMAHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMTEKFNLGAMFGDAQTRDFLAPMLANMVEYRQLKASAMQAAGQHFIDDDFAVKMTSPGEQTKALQLSLNDLWLTVGMELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVGVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKGLTVLLGNGLIKGLRLVGQAFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFASVLDWFGIELPASFSEFGGNILDSLINGILNALPFLNGAIEKIKALIPDWAKSALGISTEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPMKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4285824..4285952)       GpE family phage tail protein; STho1984_RS23865                                      N/A                 SalmonellaentericasubspentericaserovarThompsonMALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4285912..4286229)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STho1984_RS20580; phage(gi48696951)             6.77e-10            SalmonellaentericasubspentericaserovarThompsonMNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQAMLSMATEPTATVAGNGAAGEVVSFSAQ
complement(4286281..4286805)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STho1984_RS20585; phage(gi48696950)             8.93e-90            SalmonellaentericasubspentericaserovarThompsonMAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4286805..4288232)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STho1984_RS20590; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarThompsonMAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4288222..4288419)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STho1984_RS20595; phage(gi48696948)             3.53e-11            SalmonellaentericasubspentericaserovarThompsonMKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4288416..4288871)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STho1984_RS20600; phage(gi48696947)             4.28e-15            SalmonellaentericasubspentericaserovarThompsonMETLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4289032..4289346)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STho1984_RS20605; phage(gi48696935)             2.40e-28            SalmonellaentericasubspentericaserovarThompsonMKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEVARRESEAGWSRLEREFLEFRADLPLHYVRRDDYLRGQAVLEAKLDALYSKIELIQRGNL
complement(4289359..4289964)       PHAGE_Pseudo_B3_NC_006548: endolysin; STho1984_RS20610; phage(gi56692593)            6.26e-72            SalmonellaentericasubspentericaserovarThompsonMRYQYVCLVCAMTFLSADAAEPPRASLPWRNELIRTAREIWGLNAPVADFAGQLHQESGWAPDARSPAGAQGMAQFMPATAKWVSQLYPELRENKPFNPSWAIRALVQYDHQLWKSLPAKDNCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPEAILYQHASRYLQWGQASCLY
complement(4289967..4290254)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STho1984_RS20615; phage(gi48696931)             5.57e-14            SalmonellaentericasubspentericaserovarThompsonMRKIIVPRLSGWLIASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4290831..4291178                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STho1984_RS20620; phage(gi48696911)             3.52e-30            SalmonellaentericasubspentericaserovarThompsonMIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
