gi|00000000|ref|NZ_LMHY01000026.1|  Pseudomonas sp. Root71 contig_5, whole genome shotgun sequence. 438814, gc%: 59.87%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
250742..251599                     PHAGE_Clostr_phiCP7R_NC_017980: putative lysozyme-peptidase; ASD95_RS28820; phage(gi389060393)     2.26e-14            PseudomonasspRoot71MSLTVIAQRMSKTSFQRLVTGLVLSTLLVGCSSNKSSDVRVVDRNNAATQRPAVTTGQYVVRPKDTLFSIAFRYGWDYKALAARNNIPAPYTIRPGQTIRFDGRTDSTSTAVVSSSSSTPSSSSKTTVIRRSANGTTTSTTTVVPSVASKPAPAPLPPPGPAPTGWGWPSNGILIGKFSSNGSLNKGIDIAGDLGQPVLAASDGTVVYAGSGLRGYGELVIIKHSETYVSAYGHNRRLLVREGQQVKVGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLQFLPRR
251705..252712                     PHAGE_Synech_S_CBS3_NC_015465: group 2 RNA polymerase sigma factor; ASD95_RS19605; phage(gi331028036)     4.74e-42            PseudomonasspRoot71MALSKEVPEFDIDDEVLLMESSIDTDSMSNDEGAAPPSVRAKSKHSASLKQHKYIDYTRALDATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTLLDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLEIGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
complement(253185..253523)         ferredoxin family protein; ASD95_RS19610                                             N/A                 PseudomonasspRoot71MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAVAIFSEDEVPAGMENFIELNAELADIWPNITEKKDSMPDAEEFDRVINKSVGSKLKDLER
complement(253666..256245)         PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; ASD95_RS19615; phage(gi374671664)     1.11e-11            PseudomonasspRoot71MNKAVSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLEIKGWENLLAELERVNPVELLIPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMGSRLLTRWLNRPLRDLTVLLARQSSITCLLDSYRFERLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPELQVAMTELEAPHLQQLATITSTYPELAALLEKAIIDNPPAVIRDGGVLKTGYDSELDDLQSLSENAGQFLIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLPPLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRITQGRHPVVEQVLTTPFVANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAHLRAYTLFATHYFELTVLPEAQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSEVITRAREHLSRLEDTALPHETPAPAKGKPAAPQQSDLFASLPHPVLDDLAKLDLDNMTPRRALEMLYTLKTRI
256455..257189                     PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative Cro/CI transcriptional regulator; ASD95_RS19620; phage(gi589286922)     9.14e-58            PseudomonasspRoot71MQKRNVSTVLRALLDQHGISPTELHRRTGVPQSTLSRILSGKIVDPSDRHISKIAEYFSLSTDQLRGRADVSSAANAGRAPVHSELKDISLWDDDTPVDDDEVSVPFLREVELAAGSGRFVIEESERSSLRFGKRSLRHNGVQFDQAKCVTVRGNSMLPVLRDGATVGVNAGKCGIGDIVDGDLYAINHNGQLRVKQLYRLPTGIRLRSFNRDEHPDEDYTFQEVQEEPIVILGHVFWWGMYAR
257361..257702                     pyocin R2, holin; ASD95_RS19625                                                      N/A                 PseudomonasspRoot71MTVEQYALLDMPLWLLISLPILGGVTGEMWRADKEGVRGWPLVRRLGLRSGSSMICGASVIMLLHAANVSIWAACAGGCLAAMAGTDVVLGLYERWMAKRMGIGHLPSGDVED
257821..258321                     CinA family protein; ASD95_RS19630                                                   N/A                 PseudomonasspRoot71MNEITQLAAELGRRLQVLNAHVTTAESCTGGGIAEAITRIPGSSAWFEAGYVTYSNRQKTLQLDVPVELFTTVGAVSREVVEAMVRGAQKKNSAYFSVAVSGIAGPDGGTANKPVGTVWLAWGVGDQVFCERQHFPGNRDDVRRQTVKAALEGLLRYAAAEISNQG
258405..259463                     PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; ASD95_RS19635; phage(gi16130606)     0.0                 PseudomonasspRoot71MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQGKANSAKFLADNPEVAAKLEKQLRDKLLSPSSVADAKASAVKETEDDLADADI
259472..259939                     recombination regulator RecX; ASD95_RS19640                                          N/A                 PseudomonasspRoot71MTAVLDTLVAVRRTAMDLLARREHGRVELTRKLRQRGALPEMIETALDRLTEEGLLSETRYLESFVSYRARSGYGPLRIREELGQRGLQRTDIELALRESGIDWQEQLIDTWRRKFSGQLPADARERAKQGRFLAYRGYSMEMINRLFSGRGMDD
complement(259985..261103)         PHAGE_Synech_S_CAM7_NC_031927: hypothetical protein; ASD95_RS19645; phage(gi100160)     3.15e-20            PseudomonasspRoot71MPYQPNDLLSRHFEESGHDLISKVEEQLKLISPNSPNIPIYRDMILTVLRMAQEDHNRWNAKITLQALRELEQAFRVLEQFKGRRKVTVFGSARTPMEHPLYSMARELGAALVRSDMMVITGAGGGIMAAAHEGAGLTHSLGFNITLPFEQHANPTVDGTTNLLPFHFFFTRKLFFVKEADALVLCPGGFGTLDEALEVLTLIQTGKSPLVPVVLLDAPGGKFWQGALDFIHQQLEANHYILPTDMKLVKLVYNVDEAVEHINQFYSNFHSSRWLKHQFLIRMNHTLSDHALEHMQQAFADLCLSDHFHQHVYSSEEHDEAEFSHLVRLVFNFNARNHGRLRELVDYINLPENWAQSKPQVQQRTREPSKVS
261584..261778                     hypothetical protein; ASD95_RS19650                                                  N/A                 PseudomonasspRoot71MARVVLEIDTQLYRLLKSSAETHHLSLEDECCRRLRGGERRSHYLQALLAELRAEDEQRRAKSR
complement(261779..262201)         quorum-sensing-regulated virulence factor family protein; ASD95_RS19655              N/A                 PseudomonasspRoot71MLRLIVPTAAILLASSFNAQAASLKDTELNKMLQNVAAQSSVGTPRAINEDILDQGYTVDGKQLINHLSVQSSHADKMRADPKAVYFQLGASVCRNEGFRKLMAKGAIMRYDFTEVKTNRPVGSASFQESDCLQPAKKKK
