gi|00000000|ref|CP012000.1|  Klebsiella pneumoniae strain KLP41 plasmid pKp41, complete 113626, gc%: 53.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
6417..6428                         attL                                                                                 N/A                 CGCACGGTCAGC
6945..9974                         PROPHAGE_Xantho_306: Tn5044 transposase; K41_p00040; phage(gi21243163)               0.0                 KlebsiellapneumoniaeMSKKNKLLSVLSDAEQEALYGLPEFDDAQQLEYLAVTETELALANSRPSLHAKVYCLLQIGYFKAKHAFFSFDWDEVEDDCAFVLSRYFHGEVFEPKAITKHERYTQREQIAKLFGYWPWSAAFLPQLEQQAARTVRRDVTPGFVAAELIVWLNEHKIIRPGYTTLQELVSETLSAERRRLGNLLEQALDESAKAALSQLLVRDDTLSQLAALKQDAKNFGWRQMVREREKRATLEPLHAIAKTLLPKLDVSQQNLLYYASLANFYTVHDLRNLKADQTQLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFADEQVRRQQETPRVGRLLSLYVDDSVADPTPFGEVRQRAYKIMPRDTLQTTAQRMSVKPASKLALQWQAVDGLADRMRRHLRPLYVALDLSGSNPDSPWLAALAWAKGVFAKQQRLSQRPLDEWPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQIRKRLQSGELYLDDSLQHRHFSDELVEMDRKIDVLAKMEIPFLQQPVHAQLDALTAELRTQWLAFNRELKQGKLTHLEYNKDTQKLTWRKPKSENEKAREKAFYEKLPFCDVADVFRFVNDECKFLSAFTPMQPRYAKKVADADSLMAVIIAQAMNHGNHVMARTSDIPYHVLDSGYQQYLRQATLHAANDCISNAIATLPIFPYYSFDLETLYGAVDGQKFSVERPTVKARYSRKYFGRGKGVVAYTLLCNHIPLNGYLIGAHDYEAHHVFDIWYRNTSDIMPTAITGDMHSVNKANFAILHWFGRRFEPRFTDLNAQLKELYCADDPAQYQACLIRPVGKIDCDLIHREKPNIDRIVATLGLKEMTQGTLIRKLCTYTTTNPTRRAIFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRLESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIFYNSAILSRLVTKYEAAGNSKALALITKISPAAWRHILLNGHYTFQSSGKTIDLDAIVAGLELE
10081..11106                       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; K41_p00045; phage(gi557307612)     2.30e-44            KlebsiellapneumoniaeMLTQEQTVEIRVLARQGHSIRHIARTLGVSRNTVRRYLRDPSVARYQPREPRPTKLGPFESYLRQRVEQAHPIWLPATVLNREIRAQGYGGGLSLLRAFLATLKPARREAGPAVRFETEPGRQLQADFVVLRRARSPMSAFVATLGYSRMTFVTFVPDESFESVRDSLLLAFDYLGGVPREVLFDNMKTVVLERDAYGDGKHRFHPGLLQLADDLGFRIRLCRPYRAQTKGKVERFNRYFRESFYNPLLTRMKGTGLLLDCAAANRRVRDWLADEANVRVHATLNERPIDRWRQEREHLQPLPSRVRRDEAPLLDNSLRPVPLESLQHPLSVYDAIGEACR
11103..11882                       PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; K41_p00050; phage(gi557307613)     8.13e-78            KlebsiellapneumoniaeMNLQHERIDALCQQLKLERVATHYPVLAQQAVREDFSFTDFLEHLLRHEAGCRQQRSRELLTRMACFPGIKTLEDYDFSFNPGVPKALVQELGSLAFVERAENVVLIGPSGIGKTHLAIALGYKAAQAGVKTRFITAADLMLQLSTAQRQGRLKEYFNRAILGPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGAMILTSNLPFSQWADAFAGDTTLTAAMLDRLLHHAHILTLSGESYRLKDKRKAGVVRKNSKPE
11879..12118                       hypothetical protein; K41_p00055                                                     N/A                 KlebsiellapneumoniaeMIQVGQYYFGDSGVKWVSFQLVLTPAYPRCYLRAPIVGAWPGLPEAVRNVDAEVRRGGRPMNADLIRFSSSVIIPAVAA
12170..13051                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; K41_p00060; phage(gi100066)       2.88e-94            KlebsiellapneumoniaeMSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVYGTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ
complement(13301..14620)           PHAGE_Staphy_phiPV83_NC_002486: transposase; K41_p00065; phage(gi9635722)            7.29e-29            KlebsiellapneumoniaeMAASYLPYRPDQSYLLPPSLGEWLPEGHLAYFISETVDTLDLSAFHARYAGGGPGNQPFHPAMMVKVLIYGYASGVFSSRKLARKLYEDVALRVLAAGNFPAHRTLSDFRALHLTELENLFVQVVQLARECGLVKLGTIAVDGTKVKANASRHKAMSYKRMKPAEDELHCEIKALLDRAKATDDQERNEPELDIPAEISRREKRLEAIQAAKARLEARQREADQARGRSEDDGRRPRHPDGSDKGGGSYKREFGVPDDRDQESFTDPDSRIMKHAGGGSEQSYNGYTAVDAEHQIIVAAELTNCAADSQALLGMLAAVQANTGEMPAQTLADAGFRSEAVLAKVADHHGDVIVALGREGREDAKVNAKTHPHTAAIAAKLKTEQGDAAYRRRKSIVEAPNGWIKAVMGLRQFSMRGLDKVQAEWKLVCMALNLRRMAYL
complement(14897..16081)           PROPHAGE_Shewan_MR-1: transposase, putative; K41_p00070; phage(gi24373689)           2.31e-142           KlebsiellapneumoniaeMSIDAVFAQFFDDIPDPRQHAKIYYPFYDVLFLTVCAVIGGADGWEDIEDFGEVHLPWFQSKGLFKNGIPVHDTIARIISGIKPEPFQAAFVRWTQAINQHTEGALVAIDGKTLRSSYNREDRTSTIHMVSAYAAANKLVLGQIKTDAKSNEITAIPDLLALLDIKGCLVSIDAMGCQTEIAETILQQSGDYLLAVKGNQPKLFEAVRQALAPLAATPLCAATMTLDKAHGRIDGREYHIMAAGELAAQFPHWEQLRSIGVAISYRIEKREKITIEQRYYISSKALTRDEFARSVRGHWAIENSLHWVLDVTMGEDDCPIYRGDAAEILACIRHMGLNMLRAETSRKASIRRKQKIAGMSSEYLEKVLNGGVSGNPRKFRHSALWNFLGGWSAA
16192..16413                       PHAGE_Entero_HK022_NC_002166: IS903 transposase; K41_p00075; phage(gi9634149)        2.37e-14            KlebsiellapneumoniaeMLVMRKEGLVHWKKISGYHRRSQAETAMYRFKQLMTGKISLRTYNGQVGEVMAYVGAINKLNPLGLPVRKRRV
16585..16944                       hypothetical protein; K41_p00080                                                     N/A                 KlebsiellapneumoniaeMNKKILILTALLMSPVAVFAVDKTMPMGDHHSMSPASQELMSGMKSMHNDMMAGVMSSDPDVAFAKGMIAHHQGAIQMSETQLKFGKDPEMRKLAEDIIKAQQPEIDQMQKWVKNHEKP
complement(17601..17984)           membrane protein; K41_p00085                                                         N/A                 KlebsiellapneumoniaeMKTVSGVLVYLAVCFLVFTAWLICFAQHAPFPGGEQALTLTYLLNVFFVYFLMVPFIHFFQVETYYKALMGLADGTEHIIQFYEEVPVMLIYLLSAGLTLFFYFIPLKLFFNKKLKLQLQQKQRKDI
complement(18110..18730)           PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; K41_p00090; phage(gi209901279)     3.94e-07            KlebsiellapneumoniaeMFVFGYLRASTSEQDASRAKNALKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSHLALSSTVSDDFTRSMLKAVNGMLLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
complement(18819..21716)           PROPHAGE_Xantho_33913: Tn5041 transposase; K41_p00095; phage(gi21231545)             3.56e-34            KlebsiellapneumoniaeMSRRHIFTERQRAALFDLPTDELSLLKFYTLGDDDLENIRQRRRPENRIGFALQLCALRYPGRALAPGEMIPREVLSFVGAQLGVPADALLTYATRRQTRQQHMDTLREIYGYKTFTGRGARDLREWTFGQAEDARSNEDLAHRFIVRCRETSTILPAVSTIERLCADALVAAEWRIETRIAENLTADVRDHLDKLLSEMLAGNISRFIWLRNFEVGNNSAAANRLLDRLEFLRTLNINHSALASIPAHRIARLRRQGERYFTDGLRDITSDRRWAILAVCVVEWEAAIADAIVETHDRIVGKTWREAKRQHDETISGSKATLTDTIRTFTALGASLLEARSDGTPLEMAVASSVAWDRLAQLVATGTQLSNTLADEPLAYVGQGYHRFRRYAPRMLRCLKLEAAPVAGPLVAAALSIGEMKGVASPERRFLRPSSKWNRHLRAQEKGDTRLWEVAVLFHLRDAFRSGDVWLAHSRRYGDLKQVLVPMIAAQENAKLAVPSNPQDWLADRKARLTIALKRLARAARNGTIPHGSIEDGTLRIDRLTADVPDGAEALILDLYRRMPSVRITDMLLEVDAALGFTDAFTHLRTGAPCRDRIGLLNVLLAEGLNLGLRKMAEATNTHDYWQLSRLARWHVESEAMNQALAIVVAAQGKLPMSRVWGMGTSASSDGQFFPTARHGEVMNMVNAKYGSVPGLKAYTHVSDQFAPFACQSIPATVSEAPYILDGLLMNEVGRHVREQYADTAGFTDHLFGASSLLGYNLVLRIRDLPSKRLYVFNPDTTPRELRKLVGGKAREDLIVANWPDIFRCAATMTAGKIRPSQLLRKLASYPRQNNLAVALREVGRIERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRIAGLNLLTAVIIYWNTVHLGHAVTERRNEGLDVPPEFLPHISPLGWAHILLTGEYLWPKEPKA
21789..22493                       PROPHAGE_Brucel_1330: transposase, putative; K41_p00100; phage(gi23502708)           1.98e-53            KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
23178..23537                       oxacillinase-carbenicillinase; K41_p00105                                            N/A                 KlebsiellapneumoniaeMSSLTISPKEQIQFLLRFVAHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEKNGRQVVFARLEIGKEKSDIPGGSKAREDILVELPVLMGNK
23803..24054                       PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; K41_p00110; phage(gi100061)     4.13e-06            KlebsiellapneumoniaeMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
24237..25097                       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; K41_p00115; phage(gi100066)       5.20e-57            KlebsiellapneumoniaeMSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
complement(25208..25618)           PROPHAGE_Brucel_1330: transposase, putative; K41_p00120; phage(gi23502708)           7.58e-38            KlebsiellapneumoniaeMNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNKGSDAQWNENSR
25595..25711                       transposase; K41_p00125                                                              N/A                 KlebsiellapneumoniaeMPAFEWVHVQLHQQKGMISLSPPTICNSAHRRSSGCGR
complement(25665..26969)           PROPHAGE_Brucel_1330: transposase, putative; K41_p00130; phage(gi23501616)           1.16e-33            KlebsiellapneumoniaeMLNTRVHQSEVSMATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK
complement(27008..27715)           EAL domain protein; K41_p00135                                                       N/A                 KlebsiellapneumoniaeMTSSQPAGWTAAELAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPPGQFLPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEVKRVLADMALPAELLEIELTESVAFGNPALFASFDALRAIGVRFAADDFGTGYSCLQHLKCCPITTLKIDQSFVARLPDDARDQTIVRAVIQLAHGLGMDVIFRRRLHQLIGRNGCCAASS
complement(27712..27948)           mercury resistance protein; K41_p00140                                               N/A                 KlebsiellapneumoniaeMNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS
complement(27945..28307)           transcriptional regulator MerD; K41_p00145                                           N/A                 KlebsiellapneumoniaeMSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDDAALQRLCFVRAAFEAGIGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALAHLDAQLASMPAERAHEEALP
complement(28325..30019)           mercuric reductase; K41_p00150                                                       N/A                 KlebsiellapneumoniaeMSTLKITGMTCDSCAVHVKDALEKVPGVQSADVSYAKGSAKLAIEVGTSPDALTAAVAGLGYRATLADAPSVSTPGGLLDKMRDLLGRNDKTGSSGALHIAVIGSGGAAMAAALKAVEQGARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNLIVQLNDGGERVVAFDRCLIATGASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIGSSVVALELAQAFARLGAKVTILARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQVAYINGEGDGEFVLTTAHGELRADKLLVATGRAPNTRKLALDATGVTLTPQGAIVIDPGMRTSVEHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQVATVGYSEAEAHHDGIKTDSRTLTLDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG
30053..30064                       attR                                                                                 N/A                 CGCACGGTCAGC
complement(30071..30493)           mercury transport protein MerC; K41_p00155                                           N/A                 KlebsiellapneumoniaeMGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQYEGLFISRLLPLFAALAFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWWTANLMYVGLALMIGVSIWDFVSPAHRRCGPDGCELPAKRL
complement(31382..32092)           AAA domain protein; K41_p00180                                                       N/A                 KlebsiellapneumoniaeMPLITRLMLQNFKKFPELDLRFTHDRNILVGDNESGKSTILLALDLVLSDSRHRVEALGVESLLSQSAVRQFQEGERRADQLPVLTADVFLSNGGDPDLNGRQNLAGINADGLRMRIAPMTEEYGQDIHNVLQQDPDNFPYEYYSVRFSTFSGGHFASFRRYLRHLLLDSARIDNEHAAQEYTRTVYSVNVPVADRYRLENSYRQQKMHFCTRHLSAINDTLETYQFGVRVMLPTC
complement(32579..32809)           virulence factor; K41_p00190                                                         N/A                 KlebsiellapneumoniaeMRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQFEKADPDFMAEREDVVSDEGRFNL
33462..33668                       hypothetical protein; K41_p00195                                                     N/A                 KlebsiellapneumoniaeMSAPDLADDIANGRSLTNRCVETSRTGHVVQLECQAMSLRVTTADYARAVRAWELTGERRETAPTSAN
33714..34022                       hypothetical protein; K41_p00200                                                     N/A                 KlebsiellapneumoniaeMGMFDTVRFRYRMPDGVTGTDFQTDDLDCECEFYEISAEGRLLRWMGDGTRTDTCFDGMLTLSADDGYHLYFEHGTLAWIEVYSQGDRRWPFEPGRFMTDLA
34050..34379                       hypothetical protein; K41_p00205                                                     N/A                 KlebsiellapneumoniaeMCNLCRADGNYFHTPECVYDQLVSEYPVMWLRDSTRIGACYTLRELLSPEGMVLAIQNAPPVTGWRLRMQYNEAIDEEINPQRGDCTELLSRTDALLVFRSLQDDTASA
34447..34803                       hypothetical protein; K41_p00210                                                     N/A                 KlebsiellapneumoniaeMATAFSTMRKYGMNILTATQHMDINAYVKSDPRMPRMRLRRYLGQYGLRGEALNREVRRIVAGPERRDSTLQVGIYYTWPYGWEPADFTPMMRRIFRGKRTRHVMLFDELPQLFGKSG
34810..35142                       hypothetical protein; K41_p00215                                                     N/A                 KlebsiellapneumoniaeMNHDLMAVYAASEIVELLTLCQELQSEKDGRERPAPGAYSRDEDAFAERIRSACGHALLLRRLLPVTTTLSAIGAEMERRGEISVLPGEDYAQKALARLTVQYLSTGGNK
35142..35924                       PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; K41_p00220; phage(gi764159894)     1.80e-06            KlebsiellapneumoniaeMIPAIPGQGVSFSAAQLPVAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRSDFSLTAPYPFVQLATLKQRTEKATRTAGRAPAGSQPHRIVPLSDANYVSQLEMMVATLKIPLERRNKRTGRTEKARIWEITDRTVRTWISEAVDAAAADGVTFSVPVTPHTFRHSYGMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFQMPGDEAVALLKGNGR
