Submission Results

Sequence Name: Streptococcus suis 89/1591, whole genome shotgun sequencing

GenBank Accession Number: AAFA00000000.3

GenInfo (GI) Number: 223899238

Download Results: AAFA00000000.3.PHASTER.zip

gi|223899238|ref|AAFA00000000.3| Streptococcus suis 89/1591 whole genome shotgun sequence. .2143253, gc%: 41.05%

Download summary as .txt file: summary.txt file_download

Total: 5 prophage regions have been identified, of which 1 regions are intact, 3 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
129Kbincomplete3022789892-818930 info_outlinePHAGE_Lactoc_bIL31141.11%Show info_outline
254.9Kbintact100581071254-1126153 info_outlinePHAGE_Lactob_Lj96541.16%Show info_outline
335.6Kbquestionable80481458176-1493856 info_outlinePHAGE_Strept_341.85%Show info_outline
412.8Kbincomplete20211914935-1927743 info_outlinePHAGE_Strept_TP_J3440.28%Show info_outline
513.4Kbincomplete40142004764-2018219 info_outlinePHAGE_Equid_839.90%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|223899238|ref|AAFA00000000.3| Streptococcus suis 89/1591 whole genome shotgun sequence. [asmbl_id: NC_000000].2143253, gc%: 41.05%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 24 CDS

#CDS PositionBLAST HitE-ValueSequence
1789892..789906attL0.0Showinfo_outline
2complement(803746..804183)PHAGE_Strept_3: hypothetical protein SpyM3_1124; SsuiDRAFT_4076; phage(gi28876294)4e-08Showinfo_outline
3complement(804624..805127)conserved hypothetical protein; SsuiDRAFT_40770.0Showinfo_outline
4complement(805169..805570)conserved hypothetical protein; SsuiDRAFT_40780.0Showinfo_outline
5complement(805620..806162)phage protein; SsuiDRAFT_40790.0Showinfo_outline
6complement(806183..806356)conserved hypothetical protein; SsuiDRAFT_40800.0Showinfo_outline
7complement(806701..808143)PHAGE_Lactoc_bIL310: helicase; SsuiDRAFT_4081; phage(gi13095886)5e-62Showinfo_outline
8complement(808197..809066)PHAGE_Strept_5: hypothetical protein SpyM3_1341; SsuiDRAFT_4082; phage(gi28876423)5e-12Showinfo_outline
9complement(809050..809160)hypothetical protein; SsuiDRAFT_40830.0Showinfo_outline
10complement(809289..809573)PHAGE_Lactoc_bIL310: hypothetical protein bIL310p19; SsuiDRAFT_4084; phage(gi13095880)5e-06Showinfo_outline
11complement(809563..809901)phage protein; SsuiDRAFT_40850.0Showinfo_outline
12complement(809898..810047)hypothetical protein; SsuiDRAFT_40860.0Showinfo_outline
13complement(810059..810262)hypothetical protein; SsuiDRAFT_40870.0Showinfo_outline
14complement(810250..810651)hypothetical protein; SsuiDRAFT_40880.0Showinfo_outline
15complement(811107..811730)PHAGE_Lactoc_bIL311: Orf3; SsuiDRAFT_4089; phage(gi13095661)2e-28Showinfo_outline
16complement(811742..811948)PHAGE_Lactoc_bIL311: repressor; SsuiDRAFT_4090; phage(gi13095660)9e-10Showinfo_outline
17complement(811966..812166)PHAGE_Lactoc_bIL311: ps3 protein 14-like transcriptional regulator; SsuiDRAFT_4091; phage(gi19343481)2e-11Showinfo_outline
18812370..812876PHAGE_Strept_858: orf44; SsuiDRAFT_4092; phage(gi168229317)2e-13Showinfo_outline
19813263..814267conserved hypothetical protein; SsuiDRAFT_40930.0Showinfo_outline
20814497..815669PHAGE_Lactoc_bIL311: integrase; SsuiDRAFT_4094; phage(gi13095659)2e-59Showinfo_outline
21815807..816190S4 domain protein YaaA; SsuiDRAFT_40950.0Showinfo_outline
22816193..817287DNA replication and repair protein RecF; SsuiDRAFT_40960.0Showinfo_outline
23817425..817439attR0.0Showinfo_outline
24complement(817728..818930)PROPHAGE_Escher_CFT073: transposase; SsuiDRAFT_4097; phage(gi26248352)8e-13Showinfo_outline

Region 2, total 63 CDS

#CDS PositionBLAST HitE-ValueSequence
11071254..1071265attL0.0Showinfo_outline
21071545..1071556attL0.0Showinfo_outline
3complement(1085304..1086971)PHAGE_Strept_Dp_1: DnaX DNA polymerase III clamp loader complex gamma-tau-delta subunit; SsuiDRAFT_2974; phage(gi327198331)7e-50Showinfo_outline
4complement(1086971..1087332)conserved hypothetical protein; SsuiDRAFT_29750.0Showinfo_outline
5complement(1087333..1087584)conserved hypothetical protein; SsuiDRAFT_39880.0Showinfo_outline
6complement(1087588..1087932)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_3989; phage(gi119953750)7e-63Showinfo_outline
7complement(1087935..1088144)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_3990; phage(gi119953749)4e-26Showinfo_outline
8complement(1088153..1093084)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0324; SsuiDRAFT_3991; phage(gi41179262)2e-54Showinfo_outline
9complement(1093086..1093436)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0323; SsuiDRAFT_3992; phage(gi41179261)8e-22Showinfo_outline
10complement(1093446..1096583)PHAGE_Lactoc_bIBB29: putative tail tape measure protein; SsuiDRAFT_3993; phage(gi194097535)5e-28Showinfo_outline
11complement(1096994..1097368)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0320; SsuiDRAFT_3994; phage(gi41179250)3e-11Showinfo_outline
12complement(1097379..1097795)PHAGE_Lactob_Lj965: putative major tail protein; SsuiDRAFT_3995; phage(gi41179249)6e-10Showinfo_outline
13complement(1097799..1098167)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0318; SsuiDRAFT_3996; phage(gi41179248)2e-05Showinfo_outline
14complement(1098164..1098676)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0317; SsuiDRAFT_3997; phage(gi41179258)8e-10Showinfo_outline
15complement(1098664..1098987)PHAGE_Brocho_BL3: gp11; SsuiDRAFT_3998; phage(gi327409401)2e-08Showinfo_outline
16complement(1098944..1099273)PHAGE_Lactob_Lj965: hypothetical protein Ljo_0315; SsuiDRAFT_3999; phage(gi41179246)2e-06Showinfo_outline
17complement(1099283..1099471)hypothetical protein; SsuiDRAFT_40000.0Showinfo_outline
18complement(1099482..1100498)PHAGE_Staphy_CNPH82: conserved phage protein; SsuiDRAFT_4001; phage(gi119953686)8e-87Showinfo_outline
19complement(1100516..1101037)PHAGE_Lactob_Lj965: putative scaffold protein; SsuiDRAFT_4002; phage(gi41179243)3e-16Showinfo_outline
20complement(1101201..1101491)PHAGE_Brocho_NF5: gp56; SsuiDRAFT_4003; phage(gi327197641)1e-16Showinfo_outline
21complement(1101503..1101739)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4004; phage(gi119953782)2e-11Showinfo_outline
221101997..1102533PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; SsuiDRAFT_4005; phage(gi17546156)2e-09Showinfo_outline
231102509..1103348PROPHAGE_Escher_MG1655: IS150 transposase B; SsuiDRAFT_4006; phage(gi16131429)1e-70Showinfo_outline
24complement(1103397..1103597)PHAGE_Strept_SM1: gp36; SsuiDRAFT_4007; phage(gi32469467)8e-20Showinfo_outline
25complement(1103566..1105035)PHAGE_Strept_1: minor head protein; SsuiDRAFT_4008; phage(gi39653715)2e-65Showinfo_outline
26complement(1104986..1106434)PHAGE_Lactob_Lj965: putative portal protein; SsuiDRAFT_4009; phage(gi41179240)4e-59Showinfo_outline
27complement(1106447..1107868)PHAGE_Lactoc_1: TerL; SsuiDRAFT_4010; phage(gi13786562)7e-167Showinfo_outline
28complement(1107858..1108259)conserved hypothetical protein; SsuiDRAFT_40110.0Showinfo_outline
29complement(1108506..1108579)tRNA0.0Showinfo_outline
30complement(1108739..1109161)PHAGE_Strept_5: hypothetical protein SpyM3_1330; SsuiDRAFT_4012; phage(gi28876412)1e-46Showinfo_outline
31complement(1109237..1109506)hypothetical protein; SsuiDRAFT_40130.0Showinfo_outline
32complement(1109507..1109710)hypothetical protein; SsuiDRAFT_40140.0Showinfo_outline
33complement(1109707..1109916)hypothetical protein; SsuiDRAFT_40150.0Showinfo_outline
34complement(1110133..1110294)hypothetical protein; SsuiDRAFT_40160.0Showinfo_outline
35complement(1110294..1110506)hypothetical protein; SsuiDRAFT_40170.0Showinfo_outline
36complement(1110506..1111081)PHAGE_Temper_1: hypothetical protein phiNIH1.1_21; SsuiDRAFT_4018; phage(gi16271797)6e-21Showinfo_outline
37complement(1111092..1111517)conserved hypothetical protein; SsuiDRAFT_40190.0Showinfo_outline
38complement(1111517..1112776)PHAGE_Strept_2: hypothetical protein SpyM3_0951; SsuiDRAFT_4020; phage(gi28876235)1e-23Showinfo_outline
39complement(1112773..1113075)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4021; phage(gi119953773)6e-17Showinfo_outline
40complement(1113072..1113302)PHAGE_Strept_5: hypothetical protein SpyM3_1336; SsuiDRAFT_4022; phage(gi28876418)2e-25Showinfo_outline
41complement(1113299..1113619)PHAGE_Strept_YMC_2011: phage protein; SsuiDRAFT_4023; phage(gi399498704)2e-38Showinfo_outline
42complement(1113871..1115424)PHAGE_Strept_YMC_2011: putative primase; SsuiDRAFT_4024; phage(gi399498703)0.0Showinfo_outline
43complement(1115399..1116205)PHAGE_Strept_YMC_2011: phage protein; SsuiDRAFT_4025; phage(gi399498702)5e-105Showinfo_outline
44complement(1116210..1116680)PHAGE_Strept_858: orf38; SsuiDRAFT_4026; phage(gi168229311)5e-61Showinfo_outline
45complement(1116683..1118095)PHAGE_Strept_858: orf37; SsuiDRAFT_4027; phage(gi168229310)0.0Showinfo_outline
46complement(1118064..1118753)PHAGE_Strept_858: orf36; SsuiDRAFT_4028; phage(gi168229309)4e-117Showinfo_outline
47complement(1118750..1119226)PHAGE_Strept_5: hypothetical protein SpyM3_1345; SsuiDRAFT_4029; phage(gi28876427)1e-44Showinfo_outline
48complement(1119228..1119416)hypothetical protein; SsuiDRAFT_40300.0Showinfo_outline
49complement(1119413..1119757)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4031; phage(gi119953758)4e-11Showinfo_outline
50complement(1119890..1120039)hypothetical protein; SsuiDRAFT_40320.0Showinfo_outline
51complement(1120029..1120277)hypothetical protein; SsuiDRAFT_40330.0Showinfo_outline
52complement(1120318..1120572)PHAGE_Strept_phi3396: hypothetical protein phi3396_09; SsuiDRAFT_4034; phage(gi126011071)1e-17Showinfo_outline
53complement(1120639..1120836)PHAGE_Strept_PH15: hypothetical protein phiPH15_gp10; SsuiDRAFT_4035; phage(gi190151425)8e-15Showinfo_outline
541121061..1121309hypothetical protein; SsuiDRAFT_40360.0Showinfo_outline
55complement(1121296..1121415)hypothetical protein; SsuiDRAFT_40370.0Showinfo_outline
561121472..1121483attR0.0Showinfo_outline
57complement(1121486..1121686)PHAGE_Strept_3: putative Cro-like repressor protein; SsuiDRAFT_4038; phage(gi28876312)7e-13Showinfo_outline
581121871..1122251PHAGE_Strept_TP_J34: putative CI repressor homolog; SsuiDRAFT_4039; phage(gi444475878)3e-23Showinfo_outline
591122258..1122662PHAGE_Temper_1: hypothetical protein phiNIH1.1_03; SsuiDRAFT_4040; phage(gi16271779)7e-40Showinfo_outline
601122659..1123555Abi family protein; SsuiDRAFT_40410.0Showinfo_outline
611123840..1124997PHAGE_Strept_1: putative integrase; SsuiDRAFT_4042; phage(gi28876146)4e-95Showinfo_outline
621125158..1125169attR0.0Showinfo_outline
631125227..1126153PHAGE_Lactoc_P087: putative cysteine synthase; SsuiDRAFT_4043; phage(gi229605000)5e-97Showinfo_outline

Region 3, total 48 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1458176..1463260)PROPHAGE_Deinoc_R1: serine protease; SsuiDRAFT_2690; phage(gi15808000)5e-07Showinfo_outline
2complement(1463404..1463595)NusG antitermination factor; SsuiDRAFT_26910.0Showinfo_outline
3complement(1463802..1464074)hypothetical protein; SsuiDRAFT_27310.0Showinfo_outline
4complement(1464052..1464789)PHAGE_Strept_TP_J34: putative minor tail protein; contains lysozyme and Chap domain; SsuiDRAFT_2732; phage(gi444475919)2e-21Showinfo_outline
5complement(1464773..1465123)PHAGE_Strept_MM1: putative holin 2; SsuiDRAFT_2733; phage(gi15088792)3e-29Showinfo_outline
6complement(1465126..1465425)conserved hypothetical protein; SsuiDRAFT_27340.0Showinfo_outline
7complement(1465429..1465773)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_2735; phage(gi119953750)7e-61Showinfo_outline
8complement(1465776..1465994)PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_2736; phage(gi119953749)2e-24Showinfo_outline
9complement(1466003..1471270)PHAGE_Strept_3: putative platelet-binding protein; SsuiDRAFT_2737; phage(gi28876272)9e-107Showinfo_outline
10complement(1471267..1471962)PHAGE_Strept_3: hypothetical protein SpyM3_1103; SsuiDRAFT_2738; phage(gi28876273)8e-44Showinfo_outline
11complement(1471962..1474544)PHAGE_Strept_3: putative human platelet-binding protein; SsuiDRAFT_2739; phage(gi28876274)8e-165Showinfo_outline
12complement(1474534..1474917)PHAGE_Strept_3: hypothetical protein SpyM3_1105; SsuiDRAFT_2740; phage(gi28876275)4e-38Showinfo_outline
13complement(1474914..1475192)PHAGE_Strept_3: hypothetical protein SpyM3_1106; SsuiDRAFT_2741; phage(gi28876276)1e-19Showinfo_outline
14complement(1475203..1475790)PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2742; phage(gi28876277)3e-61Showinfo_outline
15complement(1475806..1476141)PHAGE_Strept_3: hypothetical protein SpyM3_1108; SsuiDRAFT_2743; phage(gi28876278)8e-33Showinfo_outline
16complement(1476138..1476377)PHAGE_Strept_3: hypothetical protein SpyM3_1109; SsuiDRAFT_2744; phage(gi28876279)2e-24Showinfo_outline
17complement(1476370..1476708)PHAGE_Strept_3: hypothetical protein SpyM3_1110; SsuiDRAFT_2745; phage(gi28876280)1e-39Showinfo_outline
18complement(1476695..1477090)PHAGE_Strept_3: hypothetical protein SpyM3_1111; SsuiDRAFT_2746; phage(gi28876281)5e-46Showinfo_outline
19complement(1477094..1477318)PHAGE_Strept_3: hypothetical protein SpyM3_1112; SsuiDRAFT_2747; phage(gi28876282)3e-07Showinfo_outline
20complement(1477320..1478222)PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2748; phage(gi28876283)6e-115Showinfo_outline
21complement(1478237..1478707)PHAGE_Strept_3: hypothetical protein SpyM3_1114; SsuiDRAFT_2749; phage(gi28876284)1e-42Showinfo_outline
22complement(1478790..1480205)PHAGE_Strept_3: putative terminase; SsuiDRAFT_2750; phage(gi28876285)0.0Showinfo_outline
23complement(1480350..1480481)conserved hypothetical protein; SsuiDRAFT_27510.0Showinfo_outline
24complement(1480550..1480762)hypothetical protein; SsuiDRAFT_27520.0Showinfo_outline
25complement(1480759..1481838)PHAGE_Strept_3: hypothetical protein SpyM3_1120; SsuiDRAFT_2753; phage(gi28876290)1e-80Showinfo_outline
26complement(1481831..1483096)PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2754; phage(gi28876291)0.0Showinfo_outline
27complement(1483093..1483455)PHAGE_Strept_3: hypothetical protein SpyM3_1122; SsuiDRAFT_2755; phage(gi28876292)5e-30Showinfo_outline
28complement(1483534..1483881)PHAGE_Strept_3: hypothetical protein SpyM3_1123; SsuiDRAFT_2756; phage(gi28876293)5e-43Showinfo_outline
29complement(1483978..1484412)PHAGE_Strept_3: hypothetical protein SpyM3_1124; SsuiDRAFT_2757; phage(gi28876294)1e-59Showinfo_outline
30complement(1484489..1484740)PHAGE_Strept_3: hypothetical protein SpyM3_1125; SsuiDRAFT_2758; phage(gi28876295)3e-20Showinfo_outline
31complement(1484752..1485021)conserved hypothetical protein; SsuiDRAFT_27590.0Showinfo_outline
32complement(1485021..1485197)hypothetical protein; SsuiDRAFT_27600.0Showinfo_outline
33complement(1485197..1485430)PHAGE_Strept_DT1: hypothetical protein DT1p40; SsuiDRAFT_2761; phage(gi9632457)9e-10Showinfo_outline
34complement(1485446..1485748)PHAGE_Strept_3: hypothetical protein SpyM3_1127; SsuiDRAFT_2762; phage(gi28876297)2e-25Showinfo_outline
35complement(1485758..1486276)PHAGE_Strept_3: hypothetical protein SpyM3_1128; SsuiDRAFT_2763; phage(gi28876298)2e-82Showinfo_outline
36complement(1486273..1486605)PHAGE_Strept_3: hypothetical protein SpyM3_1129; SsuiDRAFT_2764; phage(gi28876299)4e-38Showinfo_outline
37complement(1486695..1486904)hypothetical protein; SsuiDRAFT_27650.0Showinfo_outline
38complement(1486918..1487292)hypothetical protein; SsuiDRAFT_27660.0Showinfo_outline
39complement(1487320..1487781)PHAGE_Strept_phiNJ2: putative single-strand binding protein; SsuiDRAFT_2767; phage(gi414090245)2e-64Showinfo_outline
40complement(1487774..1487881)hypothetical protein; SsuiDRAFT_27680.0Showinfo_outline
41complement(1487884..1488063)PHAGE_Strept_MM1: hypothetical protein MM1p25; SsuiDRAFT_2769; phage(gi15088766)1e-06Showinfo_outline
42complement(1488053..1488379)hypothetical protein; SsuiDRAFT_27700.0Showinfo_outline
43complement(1488389..1488658)hypothetical protein; SsuiDRAFT_27710.0Showinfo_outline
44complement(1488661..1489574)PHAGE_Strept_M102: hypothetical protein M102_gp28; SsuiDRAFT_2772; phage(gi242345599)8e-64Showinfo_outline
45complement(1489575..1490246)N-acylglucosamine-6-phosphate 2-epimerase; SsuiDRAFT_24100.0Showinfo_outline
46complement(1490645..1491202)alkylhydroperoxidase like protein, AhpD family; SsuiDRAFT_24110.0Showinfo_outline
47complement(1491368..1492063)HAD-superfamily hydrolase, subfamily IA, variant 1; SsuiDRAFT_24120.0Showinfo_outline
48complement(1492117..1493856)PHAGE_Bacill_SPBc2: ABC transporter; SsuiDRAFT_2413; phage(gi9630145)4e-30Showinfo_outline

Region 4, total 23 CDS

#CDS PositionBLAST HitE-ValueSequence
11914935..1914948attL0.0Showinfo_outline
2complement(1916308..1917087)PHAGE_Plankt_PaV_LD: ABC transporter; SsuiDRAFT_2302; phage(gi371496158)4e-12Showinfo_outline
31917220..1918557protein of unknown function DUF21; SsuiDRAFT_23030.0Showinfo_outline
41918678..1919222PHAGE_Vibrio_ICP1: anaerobic ribonucleotide reductase-activating protein; SsuiDRAFT_2304; phage(gi325171080)5e-06Showinfo_outline
5complement(1919223..1919989)PHAGE_Lister_B054: gp50; SsuiDRAFT_2239; phage(gi157325334)1e-38Showinfo_outline
6complement(1919986..1920189)PHAGE_Strept_1: hypothetical protein EJ-1p20; SsuiDRAFT_2240; phage(gi39653694)8e-17Showinfo_outline
7complement(1920165..1920293)PHAGE_Strept_1: hypothetical protein EJ-1p19; SsuiDRAFT_2241; phage(gi39653693)3e-05Showinfo_outline
8complement(1920678..1921043)PHAGE_Strept_phiNJ2: hypothetical protein; SsuiDRAFT_2242; phage(gi414090252)6e-26Showinfo_outline
9complement(1921096..1921320)hypothetical protein; SsuiDRAFT_22430.0Showinfo_outline
10complement(1921301..1921558)hypothetical protein; SsuiDRAFT_22440.0Showinfo_outline
11complement(1921555..1921830)PHAGE_Strept_TP_J34: hypothetical protein; SsuiDRAFT_2245; phage(gi444475881)1e-15Showinfo_outline
12complement(1921908..1922375)PHAGE_Staphy_55: ORF029; SsuiDRAFT_2246; phage(gi66396142)4e-06Showinfo_outline
13complement(1922440..1923150)PHAGE_Strept_TP_J34: putative antirepressor; SsuiDRAFT_2247; phage(gi444475880)3e-104Showinfo_outline
141923225..1923428hypothetical protein; SsuiDRAFT_22480.0Showinfo_outline
15complement(1923397..1923570)hypothetical protein; SsuiDRAFT_22490.0Showinfo_outline
16complement(1923584..1923805)hypothetical protein; SsuiDRAFT_22500.0Showinfo_outline
17complement(1923841..1924026)PHAGE_Staphy_29: ORF049; SsuiDRAFT_2251; phage(gi66396236)1e-12Showinfo_outline
181924104..1924823conserved hypothetical protein; SsuiDRAFT_22520.0Showinfo_outline
19complement(1924820..1924972)PHAGE_Strept_SM1: gp6; SsuiDRAFT_2253; phage(gi32469437)3e-05Showinfo_outline
201925158..1925913PHAGE_Strept_PH15: putative transcriptional repressor; SsuiDRAFT_2254; phage(gi190151419)2e-54Showinfo_outline
211926089..1926523transcriptional modulator of MazE/toxin, MazF; SsuiDRAFT_22550.0Showinfo_outline
221926520..1926533attR0.0Showinfo_outline
231926649..1927743PHAGE_Strept_TP_J34: integrase; SsuiDRAFT_2256; phage(gi444475875)1e-73Showinfo_outline

Region 5, total 14 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(2004764..2005642)PHAGE_Amsact_: putative ATP-binding cassette transporter; SsuiDRAFT_2202; phage(gi9964444)2e-19Showinfo_outline
22005968..2007257transposase IS4 family protein; SsuiDRAFT_22030.0Showinfo_outline
3complement(2007410..2007928)PHAGE_Lactob_1: DNA-binding ferritin-like protein; SsuiDRAFT_2204; phage(gi226377691)2e-11Showinfo_outline
42008087..2008596hypothetical protein; SsuiDRAFT_22750.0Showinfo_outline
52008593..2010191PHAGE_Staphy_PT1028: ORF012; SsuiDRAFT_2276; phage(gi66395176)6e-06Showinfo_outline
62010531..2010704conserved hypothetical protein; SsuiDRAFT_22770.0Showinfo_outline
72010725..2011267phage protein; SsuiDRAFT_22780.0Showinfo_outline
82011534..2011938PHAGE_Strept_P9: transcriptional activator; SsuiDRAFT_2279; phage(gi157311159)7e-21Showinfo_outline
92011972..2012376PHAGE_Strept_5: hypothetical protein SpyM3_1330; SsuiDRAFT_2280; phage(gi28876412)6e-13Showinfo_outline
102012908..2014161PHAGE_Acanth_moumouvirus: putative Zn-dependent peptidase; SsuiDRAFT_2281; phage(gi441432193)6e-05Showinfo_outline
112014158..2015441PHAGE_Acanth_mimivirus: putative zinc protease; SsuiDRAFT_2282; phage(gi311977609)2e-18Showinfo_outline
122015523..2016380PHAGE_Equid_8: envelope glycoprotein J; SsuiDRAFT_2283; phage(gi386522795)7e-06Showinfo_outline
132016390..2016517CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; SsuiDRAFT_22840.0Showinfo_outline
142016518..2018219PHAGE_Cyprin_2: membrane protein ORF25D; SsuiDRAFT_2139; phage(gi422933804)6e-09Showinfo_outline
Streptococcus suis 89/1591 whole genome shotgun sequence.
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 2143253 bps
Phages: 5
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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