Submission Results

Sequence Name: Bacillus thuringiensis serovar israelensis ATCC 35646, whole genome

GenBank Accession Number: AAJM00000000.1

GenInfo (GI) Number: 74494335

Download Results: AAJM00000000.1.PHASTER.zip

gi|74494335|ref|AAJM00000000.1| Bacillus thuringiensis serovar israelensis ATCC 35646 sq1939, whole .5880839, gc%: 35.03%

Download summary as .txt file: summary.txt file_download

Total: 9 prophage regions have been identified, of which 0 regions are intact, 8 regions are incomplete, and 1 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
125.3Kbincomplete302510993-36308 info_outlinePHAGE_Bacill_BCP7836.18%Show info_outline
229.3Kbincomplete2028229361-258751 info_outlinePHAGE_Bacill_BCP7834.97%Show info_outline
316.6Kbincomplete30201635789-1652484 info_outlinePHAGE_Escher_phAPEC836.15%Show info_outline
412Kbquestionable84182493327-2505369 info_outlinePHAGE_Bacill_Bam35c40.01%Show info_outline
513.2Kbincomplete30132836678-2849959 info_outlinePHAGE_Halocy_JM_201234.09%Show info_outline
620.7Kbincomplete40252996752-3017519 info_outlinePHAGE_Bacill_BtCS3336.33%Show info_outline
725.6Kbincomplete20243707045-3732655 info_outlinePHAGE_Bacill_phIS350132.82%Show info_outline
811.9Kbincomplete50173991869-4003864 info_outlinePHAGE_Bacill_phIS350135.97%Show info_outline
913.7Kbincomplete50184095040-4108801 info_outlinePHAGE_Lister_B02536.11%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|74494335|ref|AAJM00000000.1| Bacillus thuringiensis serovar israelensis ATCC 35646 sq1939, whole [asmbl_id: NC_000000].5880839, gc%: 35.03%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 27 CDS

#CDS PositionBLAST HitE-ValueSequence
110993..11006attL0.0Showinfo_outline
211454..12140PHAGE_Bacill_36: hypothetical protein 0305phi8-36p180; RBTH_07119; phage(gi156564161)7e-17Showinfo_outline
312391..13230PHAGE_Bacill_phBC6A51: MCM domain family protein; RBTH_07120; phage(gi31415757)3e-16Showinfo_outline
413422..14462PHAGE_Bacill_36: dnaB; RBTH_07121; phage(gi156564163)2e-71Showinfo_outline
515190..15624GatB/Yqey domain protein; RBTH_071240.0Showinfo_outline
615679..16155PHAGE_Bacill_BPS13: putative ribose-phosphate pyrophosphokinase; RBTH_07125; phage(gi410492382)1e-27Showinfo_outline
716312..16650PHAGE_Bacill_W.Ph.: gp258; RBTH_07126; phage(gi371671318)3e-07Showinfo_outline
816853..18211PHAGE_Staphy_GH15: putative nicotinamide phosphoribosyl transferase; RBTH_07127; phage(gi418488115)5e-149Showinfo_outline
918570..19199hypothetical protein; RBTH_071280.0Showinfo_outline
1019330..19791PHAGE_Bacill_phiAGATE: hypothetical protein; RBTH_07129; phage(gi448260987)6e-42Showinfo_outline
1120013..20606PHAGE_Cronob_vB_CsaP_GAP52: hypothetical protein; RBTH_07132; phage(gi414087555)6e-10Showinfo_outline
1220655..21326PHAGE_Caulob_CcrColossus: putative TerD-like bacterial stress protein; RBTH_07133; phage(gi414088275)9e-11Showinfo_outline
1321666..22433PHAGE_Cronob_vB_CsaP_GAP52: hypothetical protein; RBTH_07135; phage(gi414087559)2e-10Showinfo_outline
1422486..23523phosphoesterase; RBTH_071360.0Showinfo_outline
1523543..24268PHAGE_Entero_vB_EcoM_FV3: putative Sir2-like protein; RBTH_07137; phage(gi422936398)3e-13Showinfo_outline
1624466..24999PHAGE_Bacill_BCP78: hypothetical protein; RBTH_07138; phage(gi410492966)3e-11Showinfo_outline
1725085..26269PHAGE_Musca__virus: hypothetical protein MdSGHV066; RBTH_07139; phage(gi187903103)5e-14Showinfo_outline
1826482..27399PROPHAGE_Deinoc_R1: serine protease; RBTH_07140; phage(gi15808000)1e-27Showinfo_outline
1927529..28167PHAGE_Bacill_phBC6A51: hypothetical protein BC1869; RBTH_07141; phage(gi31415763)7e-23Showinfo_outline
2028496..28882Replication termination protein; RBTH_071420.0Showinfo_outline
2129169..29182attR0.0Showinfo_outline
22complement(29217..30323)PHAGE_Thermu_26: phage XerD-like integrase; RBTH_07144; phage(gi157265417)3e-13Showinfo_outline
2330490..30861PHAGE_Bacill_SP10: ribonucleotide reductase stimulatory protein; RBTH_07145; phage(gi418489617)6e-31Showinfo_outline
2430843..32927PHAGE_Bacill_BCD7: ribonucleotide-diphosphate reductase subunit alpha; RBTH_07146; phage(gi422935995)0.0Showinfo_outline
2532946..33974PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p162; RBTH_07147; phage(gi9630287)2e-97Showinfo_outline
2634007..34258PHAGE_Bacill_BCP78: putative thioredoxin; RBTH_07148; phage(gi410492939)6e-10Showinfo_outline
2735547..36308PHAGE_Bacill_BCP78: putative nucleotidyltransferase; RBTH_07153; phage(gi410492936)9e-82Showinfo_outline

Region 2, total 28 CDS

#CDS PositionBLAST HitE-ValueSequence
1229361..230221PHAGE_Pseudo_YuA: major structural phage protein; RBTH_07849; phage(gi162135138)1e-05Showinfo_outline
2230318..231346hypothetical protein; RBTH_078500.0Showinfo_outline
3231478..232233hypothetical protein; RBTH_078510.0Showinfo_outline
4232308..232646hypothetical protein; RBTH_078520.0Showinfo_outline
5complement(232973..233404)PROPHAGE_Escher_MG1655: IS186 transposase; RBTH_07853; phage(gi90111427)1e-05Showinfo_outline
6complement(233506..234126)PHAGE_Aeromo_CC2: putative metal dependent phosphohydrolase; RBTH_07155; phage(gi423261760)5e-10Showinfo_outline
7complement(234145..234729)PHAGE_Bacill_BCP78: putative metal-dependent hydrolase; RBTH_07156; phage(gi410492850)4e-52Showinfo_outline
8complement(235075..235896)PHAGE_Bacill_BCD7: hypothetical protein; RBTH_07158; phage(gi422935992)3e-08Showinfo_outline
9complement(236289..236948)PHAGE_Lactob_1: deoxyguanosine kinase; RBTH_07160; phage(gi226377703)9e-24Showinfo_outline
10complement(237669..237965)hypothetical protein; RBTH_071640.0Showinfo_outline
11complement(238045..239571)PHAGE_Ectoca_1: EsV-1-186; RBTH_07165; phage(gi13242656)1e-08Showinfo_outline
12complement(239571..241019)PHAGE_Ectoca_1: EsV-1-186; RBTH_07167; phage(gi13242656)3e-05Showinfo_outline
13complement(241039..241746)Two-component response regulator; RBTH_071680.0Showinfo_outline
14complement(241823..242725)hypothetical protein; RBTH_071690.0Showinfo_outline
15complement(242823..244610)PHAGE_Strept_Dp_1: putative ATP-dependent helicase; RBTH_07170; phage(gi327198375)4e-36Showinfo_outline
16complement(244635..245420)PHAGE_Bacill_SP10: peptidoglycan-binding domain-containing protein; RBTH_08825; phage(gi418489575)8e-17Showinfo_outline
17complement(245910..246503)hypothetical protein; RBTH_071740.0Showinfo_outline
18complement(247041..247763)hypothetical protein; RBTH_071750.0Showinfo_outline
19complement(247877..248626)PHAGE_Strept_Dp_1: hypothetical protein; RBTH_07176; phage(gi327198339)1e-08Showinfo_outline
20complement(249405..250019)PHAGE_Canary_virus: CNPV170 thymidylate kinase; RBTH_07179; phage(gi40556108)4e-16Showinfo_outline
21complement(250016..250498)PHAGE_Clostr_st: putative dUTPase; RBTH_07180; phage(gi80159764)4e-27Showinfo_outline
22complement(250529..252490)PHAGE_Bacill_36: PcrA helicase; RBTH_07181; phage(gi156564011)5e-111Showinfo_outline
23complement(252640..252837)PHAGE_Staphy_PH15: putative phage holin; RBTH_07182; phage(gi119967859)1e-05Showinfo_outline
24complement(252967..253827)PHAGE_Bacill_L: gp28; RBTH_07183; phage(gi216905993)3e-33Showinfo_outline
25complement(254163..254681)PHAGE_Bacill_phiAGATE: putative dihydrofolate reductase; RBTH_07185; phage(gi448260875)7e-28Showinfo_outline
26complement(254678..255538)PHAGE_Bacill_BCP78: putative thymidylate synthase; RBTH_07186; phage(gi410492791)2e-37Showinfo_outline
27complement(256046..257125)PHAGE_Bacill_BCP78: hypothetical protein; RBTH_07188; phage(gi410492852)2e-148Showinfo_outline
28complement(257237..258751)PHAGE_Bacill_BCP78: hypothetical protein; RBTH_07189; phage(gi410492854)3e-32Showinfo_outline

Region 3, total 20 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(1635789..1637177)PHAGE_Bacill_B103: pre-neck appendage protein; RBTH_02620; phage(gi22855160)2e-13Showinfo_outline
2complement(1637314..1638054)PHAGE_Microc_LMM01: serine/threonine protein phosphatase; RBTH_05335; phage(gi117530196)1e-10Showinfo_outline
3complement(1638131..1639291)Rod shape-determining protein rodA; RBTH_053340.0Showinfo_outline
4complement(1639410..1640375)PHAGE_Megavi_lba: putative glycosyltransferase; RBTH_05333; phage(gi448825509)4e-05Showinfo_outline
5complement(1640350..1641102)Methyltransferase; RBTH_053320.0Showinfo_outline
6complement(1641287..1642132)PHAGE_Megavi_lba: macrocin o-methyltransferase; RBTH_05331; phage(gi448826129)2e-32Showinfo_outline
7complement(1642255..1643145)PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; RBTH_05329; phage(gi61805900)8e-40Showinfo_outline
81643290..1644159PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p022; RBTH_05328; phage(gi9630147)5e-10Showinfo_outline
91644140..1644406Glycosyltransferase; RBTH_053270.0Showinfo_outline
101644609..1645307PHAGE_Microm_12T: hypothetical protein; RBTH_05326; phage(gi472342811)2e-06Showinfo_outline
111645304..1645990Hypothetical protein; RBTH_053250.0Showinfo_outline
121646005..1646685Hypothetical protein; RBTH_043280.0Showinfo_outline
131646700..1647437PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; RBTH_04327; phage(gi448260372)6e-51Showinfo_outline
141647446..1647991PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose 3,5-epimerase; RBTH_04326; phage(gi448260371)8e-30Showinfo_outline
151648001..1648978PHAGE_Escher_phAPEC8: putative dTDP-glucose 4,6-dehydratase; RBTH_04325; phage(gi448260373)1e-70Showinfo_outline
161648991..1649845PHAGE_Escher_phAPEC8: putative dTDP-4-dehydrorhamnose reductase; RBTH_04323; phage(gi448260370)2e-37Showinfo_outline
171649954..1650724Enoyl-[acyl-carrier protein] reductase (NADH); RBTH_043220.0Showinfo_outline
181651097..1651486PHAGE_Human__8: LANA; RBTH_04321; phage(gi139472804)1e-11Showinfo_outline
19complement(1651535..1652008)Spore coat protein Y; RBTH_087100.0Showinfo_outline
201652002..1652484PHAGE_Actino_phiAsp2: Pas3; RBTH_08711; phage(gi48697404)7e-07Showinfo_outline

Region 4, total 18 CDS

#CDS PositionBLAST HitE-ValueSequence
12493327..2493596PHAGE_Bacill_Bam35c: putative protein 3; RBTH_07645; phage(gi38640279)4e-34Showinfo_outline
22493655..2494392PHAGE_Bacill_Bam35c: putative protein 4; RBTH_07644; phage(gi38640280)1e-139Showinfo_outline
32495327..2496583PHAGE_Bacill_Bam35c: DNA polymerase; RBTH_07643; phage(gi38640281)0.0Showinfo_outline
42496590..2496799PHAGE_Bacill_Bam35c: putative protein 6; RBTH_07642; phage(gi38640282)1e-32Showinfo_outline
52497484..2497822PHAGE_Bacill_Bam35c: putative protein 10; RBTH_07641; phage(gi38640285)2e-60Showinfo_outline
62497810..2498394PHAGE_Bacill_Bam35c: putative protein 11; RBTH_07640; phage(gi38640286)8e-106Showinfo_outline
72498445..2498759PHAGE_Bacill_Bam35c: putative protein 13; RBTH_07638; phage(gi38640288)8e-60Showinfo_outline
82498740..2499378PHAGE_Bacill_Bam35c: putative protein 14; RBTH_07637; phage(gi38640289)2e-125Showinfo_outline
92499674..2499946PHAGE_Bacill_Bam35c: putative protein 17; RBTH_07636; phage(gi38640292)6e-42Showinfo_outline
102499946..2501016PHAGE_Bacill_Bam35c: putative protein 18; RBTH_07635; phage(gi38640293)0.0Showinfo_outline
112501058..2501288PHAGE_Bacill_Bam35c: putative protein 19; RBTH_07634; phage(gi38640294)3e-39Showinfo_outline
122501292..2501498PHAGE_Bacill_Bam35c: putative protein 20; RBTH_07633; phage(gi38640295)5e-33Showinfo_outline
132501638..2502009PHAGE_Bacill_Bam35c: putative protein 21; RBTH_07632; phage(gi38640296)4e-67Showinfo_outline
142502337..2502612PHAGE_Bacill_Bam35c: putative protein 24; RBTH_07631; phage(gi38640299)3e-50Showinfo_outline
152502616..2503230PHAGE_Bacill_Bam35c: putative protein 25; RBTH_07630; phage(gi38640300)1e-115Showinfo_outline
162503230..2503982PHAGE_Bacill_Bam35c: predicted amidase; RBTH_07629; phage(gi38640301)1e-141Showinfo_outline
172503966..2504442PHAGE_Bacill_Bam35c: putative protein 27; RBTH_07628; phage(gi38640302)1e-89Showinfo_outline
182504506..2505369PHAGE_Bacill_Bam35c: putative protein 28; RBTH_07627; phage(gi38640303)5e-164Showinfo_outline

Region 5, total 15 CDS

#CDS PositionBLAST HitE-ValueSequence
12836678..2836689attL0.0Showinfo_outline
22838625..2839914PHAGE_Halocy_JM_2012: chaperonin GroEL; RBTH_00169; phage(gi389060206)2e-47Showinfo_outline
32839811..2840260PHAGE_Halocy_JM_2012: chaperonin GroEL; RBTH_04496; phage(gi389060206)4e-08Showinfo_outline
4complement(2840339..2841517)PROPHAGE_Oceano_HTE831: integrase; RBTH_04497; phage(gi23097608)2e-54Showinfo_outline
5complement(2841566..2842150)PHAGE_Staphy_PH15: putative cI-like repressor; RBTH_04498; phage(gi119967867)1e-08Showinfo_outline
62842372..2842659hypothetical protein; RBTH_044990.0Showinfo_outline
72842939..2843265hypothetical protein; RBTH_045000.0Showinfo_outline
82843369..2844406PHAGE_Bacill_phi105: hypothetical protein phi105_42; RBTH_08496; phage(gi22855035)1e-102Showinfo_outline
92844504..2845919PHAGE_Staphy_PT1028: ORF001; RBTH_04502; phage(gi66395165)2e-78Showinfo_outline
102846233..2846451hypothetical protein; RBTH_045030.0Showinfo_outline
112846473..2846853PHAGE_Bacill_WBeta: conserved phage protein; RBTH_04504; phage(gi85701424)2e-52Showinfo_outline
122846874..2847158hypothetical protein; RBTH_045050.0Showinfo_outline
132847682..2848308PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; RBTH_04506; phage(gi9631364)3e-07Showinfo_outline
142848338..2848772PHAGE_Clostr_phi3626: putative prohead protease; RBTH_04507; phage(gi20065968)7e-15Showinfo_outline
152849959..2849970attR0.0Showinfo_outline

Region 6, total 25 CDS

#CDS PositionBLAST HitE-ValueSequence
12996752..2997438PHAGE_Plankt_PaV_LD: ABC transporter; RBTH_05050; phage(gi371496158)2e-28Showinfo_outline
2complement(2998126..2998491)hypothetical protein; RBTH_042690.0Showinfo_outline
3complement(2998513..3000054)PHAGE_Bacill_BMBtp2: phage minor structural protein; RBTH_04270; phage(gi431809466)3e-27Showinfo_outline
4complement(3000029..3002833)PHAGE_Bacill_BtCS33: minor structural protein; RBTH_04271; phage(gi392972724)0.0Showinfo_outline
5complement(3002830..3004299)PHAGE_Bacill_BtCS33: phage tail fiber protein; RBTH_04272; phage(gi392972723)0.0Showinfo_outline
6complement(3004341..3005228)PHAGE_Lister_2389: tail tape measure protein; RBTH_08500; phage(gi17488515)4e-21Showinfo_outline
7complement(3005454..3006464)PHAGE_Bacill_phBC6A52: hypothetical protein BC2594; RBTH_04275; phage(gi31415859)3e-87Showinfo_outline
8complement(3006409..3007890)PHAGE_Lactoc_bIL285: tail protein; RBTH_08501; phage(gi13095732)1e-34Showinfo_outline
9complement(3007949..3008152)Phage protein; RBTH_085020.0Showinfo_outline
10complement(3008206..3008358)prophage pi2 protein 40; RBTH_093170.0Showinfo_outline
11complement(3008627..3008836)PHAGE_Bacill_BtCS33: transcription regulator; RBTH_01469; phage(gi392972758)2e-18Showinfo_outline
123009092..3009256PHAGE_Bacill_phBC6A52: hypothetical protein BC2571; RBTH_01470; phage(gi31415836)2e-11Showinfo_outline
133010081..3010308hypothetical protein; RBTH_014710.0Showinfo_outline
143010423..3010701PHAGE_Bacill_WBeta: collagen triple helix repeat protein; RBTH_08478; phage(gi85701419)4e-06Showinfo_outline
153010986..3011750PHAGE_Bacill_WBeta: collagen triple helix repeat protein; RBTH_04236; phage(gi85701419)2e-44Showinfo_outline
16complement(3012793..3012954)PHAGE_Bacill_BtCS33: phage protein; RBTH_08479; phage(gi392972749)3e-07Showinfo_outline
17complement(3013058..3013393)hypothetical protein; RBTH_042350.0Showinfo_outline
18complement(3013395..3013583)hypothetical protein; RBTH_042340.0Showinfo_outline
19complement(3013586..3014920)PHAGE_Bacill_SPP1: hypothetical protein SPP1p086; RBTH_04233; phage(gi22855127)6e-97Showinfo_outline
20complement(3014905..3015864)PHAGE_Geobac_E2: putative replication protein; RBTH_04232; phage(gi148747766)6e-65Showinfo_outline
21complement(3016135..3016419)PHAGE_Deep_s_D6E: hypothetical protein; RBTH_04231; phage(gi423262356)2e-06Showinfo_outline
223016642..3016902PHAGE_Bacill_BtCS33: hypothetical protein; RBTH_04230; phage(gi392972751)2e-26Showinfo_outline
23complement(3016899..3017114)PHAGE_Bacill_BtCS33: hypothetical protein; RBTH_04229; phage(gi392972750)2e-26Showinfo_outline
24complement(3017092..3017325)hypothetical protein; RBTH_042280.0Showinfo_outline
25complement(3017298..3017519)PHAGE_Geobac_E2: hypothetical protein GBVE2_gp065; RBTH_09310; phage(gi158380391)9e-05Showinfo_outline

Region 7, total 26 CDS

#CDS PositionBLAST HitE-ValueSequence
13707045..3707057attL0.0Showinfo_outline
2complement(3707399..3707965)PHAGE_Bacill_phIS3501: site-specific phage integrase; RBTH_04303; phage(gi422934319)6e-25Showinfo_outline
3complement(3708502..3710145)ABC transporter permease protein; RBTH_043040.0Showinfo_outline
4complement(3710180..3710941)PHAGE_Plankt_PaV_LD: ABC transporter; RBTH_04305; phage(gi371496158)3e-36Showinfo_outline
5complement(3711174..3712196)Hypothetical membrane spanning protein; RBTH_043060.0Showinfo_outline
6complement(3712498..3712782)hypothetical protein; RBTH_043080.0Showinfo_outline
73712873..3713310Radical SAM superfamily protein; RBTH_043090.0Showinfo_outline
83713724..3714626PHAGE_Bacill_phIS3501: phage replication protein DnaD; RBTH_03459; phage(gi422934307)1e-175Showinfo_outline
93714589..3715401PHAGE_Bacill_phIS3501: phage replication protein DnaC; RBTH_03460; phage(gi422934308)7e-157Showinfo_outline
103715443..3715709PHAGE_Bacill_phIS3501: group-specific phage protein; RBTH_03461; phage(gi422934309)1e-45Showinfo_outline
113715781..3715945PHAGE_Staphy_SpaA1: phage related protein; RBTH_03462; phage(gi399498906)2e-26Showinfo_outline
123715963..3716178PHAGE_Bacill_phIS3501: phage protein; RBTH_03463; phage(gi422934310)2e-38Showinfo_outline
13complement(3716175..3716435)PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03464; phage(gi422934311)1e-45Showinfo_outline
143716847..3717044PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03465; phage(gi422934312)2e-32Showinfo_outline
153717206..3717514PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03466; phage(gi422934313)5e-56Showinfo_outline
163717587..3717934PHAGE_Bacill_phIS3501: phage protein; RBTH_03467; phage(gi422934314)6e-68Showinfo_outline
173717969..3718178PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp27; RBTH_03468; phage(gi197261537)1e-16Showinfo_outline
183718546..3718809PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03469; phage(gi422934315)2e-45Showinfo_outline
193719009..3719203PHAGE_Strept_Sfi21: hypothetical protein Sfi21p42; RBTH_03470; phage(gi19263425)1e-05Showinfo_outline
203720085..3720420PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03472; phage(gi422934317)1e-59Showinfo_outline
213720587..3720751PHAGE_Bacill_BtCS33: phage protein; RBTH_08381; phage(gi392972757)8e-23Showinfo_outline
223721372..37219325-methylcytosine-specific restriction enzyme A; RBTH_047020.0Showinfo_outline
233722129..3724156PHAGE_Burkho_KS5: gp28; RBTH_04703; phage(gi327198026)1e-05Showinfo_outline
243724212..3726020PHAGE_Bacill_36: PcrA helicase; RBTH_04704; phage(gi156564011)2e-12Showinfo_outline
253726323..3727603PHAGE_Amsact_: hypothetical protein AMV156; RBTH_04706; phage(gi9964470)3e-06Showinfo_outline
263732655..3732667attR0.0Showinfo_outline

Region 8, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
13991869..3991904attL0.0Showinfo_outline
2complement(3993496..3994344)PHAGE_Ectoca_1: EsV-1-65; RBTH_03482; phage(gi13242537)2e-17Showinfo_outline
33994675..3994845PHAGE_Bacill_phIS3501: ArpU family phage transcriptional regulator; RBTH_03713; phage(gi422934318)2e-26Showinfo_outline
43994842..3995384PHAGE_Bacill_phIS3501: site-specific phage integrase; RBTH_03714; phage(gi422934319)3e-99Showinfo_outline
53995600..3995824PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03715; phage(gi422934320)9e-37Showinfo_outline
63996242..3996541PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03716; phage(gi422934321)1e-51Showinfo_outline
73996576..3996797PHAGE_Bacill_phIS3501: hypothetical protein; RBTH_03717; phage(gi422934322)4e-34Showinfo_outline
83996790..3997068PHAGE_Bacill_phIS3501: phage protein; RBTH_03718; phage(gi422934323)3e-45Showinfo_outline
93997065..3997277PHAGE_Bacill_phIS3501: phage protein; RBTH_03719; phage(gi422934324)4e-33Showinfo_outline
103997411..3997665PHAGE_Bacill_phIS3501: phage protein; RBTH_03721; phage(gi422934325)6e-47Showinfo_outline
113997655..3998032PHAGE_Bacill_phIS3501: HNH endonuclease domain protein; RBTH_03722; phage(gi422934326)2e-73Showinfo_outline
123998161..3998664PHAGE_Bacill_phIS3501: terminase small subunit; RBTH_03723; phage(gi422934327)5e-92Showinfo_outline
133998654..4000360PHAGE_Bacill_phIS3501: terminase large subunit; RBTH_03724; phage(gi422934328)0.0Showinfo_outline
144000549..4000839PHAGE_Bacill_phIS3501: portal protein; RBTH_03725; phage(gi422934329)2e-37Showinfo_outline
154001530..4002414Transporter, drug/metabolite exporter family; RBTH_063010.0Showinfo_outline
16complement(4002432..4002683)Hypothetical protein; RBTH_083840.0Showinfo_outline
174002737..4002772attR0.0Showinfo_outline
18complement(4002775..4003119)Hypothetical protein interrupted by bcr1 sequence repeat; RBTH_034150.0Showinfo_outline
19complement(4003139..4003864)PHAGE_Salmon_ST160: hypothetical protein; RBTH_03414; phage(gi318065920)1e-13Showinfo_outline

Region 9, total 18 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4095040..4095510)PHAGE_Synech_S_SSM7: RIIA-RIIB membrane-associated protein; RBTH_03027; phage(gi326783953)5e-20Showinfo_outline
2complement(4095589..4095858)Primosomal protein N'; RBTH_083830.0Showinfo_outline
3complement(4095855..4097948)Primosomal protein N'; RBTH_020930.0Showinfo_outline
4complement(4098270..4098464)PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp27; RBTH_09250; phage(gi115334637)4e-11Showinfo_outline
5complement(4098469..4099056)PHAGE_Geobac_GBSV1: major tail protein; RBTH_03797; phage(gi115334636)7e-43Showinfo_outline
6complement(4099057..4099392)PHAGE_Bacill_1: Putative aminopeptidase; RBTH_03799; phage(gi155042942)8e-22Showinfo_outline
7complement(4099389..4099742)PHAGE_Strept_PH10: hypothetical protein PH10_gp40; RBTH_03800; phage(gi238821357)2e-21Showinfo_outline
8complement(4099786..4100082)PHAGE_Geobac_E2: putative head-tail adaptor; RBTH_03801; phage(gi148747735)2e-17Showinfo_outline
9complement(4100084..4100380)PHAGE_Lister_B025: gp7; RBTH_03802; phage(gi157325224)4e-17Showinfo_outline
10complement(4100393..4101556)PHAGE_Lister_B025: Cps; RBTH_03803; phage(gi157325222)3e-66Showinfo_outline
11complement(4101680..4102363)PHAGE_Lister_B025: gp4; RBTH_03804; phage(gi157325221)3e-53Showinfo_outline
12complement(4102335..4102544)PHAGE_Staphy_phi5967PVL: phage portal protein; RBTH_09251; phage(gi431810270)6e-09Showinfo_outline
13complement(4103051..4103602)PHAGE_Lister_B025: gp3; RBTH_03806; phage(gi157325220)7e-52Showinfo_outline
14complement(4103629..4104486)PHAGE_Lister_B025: putative terminase large subunit; RBTH_03807; phage(gi157325219)2e-102Showinfo_outline
154104773..4105141hypothetical protein; RBTH_042050.0Showinfo_outline
164105310..4105507hypothetical protein; RBTH_042060.0Showinfo_outline
174105829..4106077hypothetical protein; RBTH_042080.0Showinfo_outline
184106324..4108801PHAGE_Prochl_Syn1: hypothetical protein; RBTH_04209; phage(gi326784190)4e-06Showinfo_outline
Bacillus thuringiensis serovar israelensis ATCC 35646 sq1939, whole
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5880839 bps
Phages: 9
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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