gi||ref|AARM00000000.2| Listeria monocytogenes FSL J2-003, whole genome shotgun sequencing 2741640, gc%: 37.82%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
202023..202036                     attL                                                                                 N/A                 TTAAATATGTAAAA
203849..204319                     PHAGE_Escher_vB_EcoM_PhAPEC2_NC_024794: deoxycytidylate deaminase; PP_00230; phage(gi682124484)     5.02e-07            MERAFFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELRKRNKLNRS
204701..206107                     hypothetical; PP_00231                                                               N/A                 VDKLFLARFQFASTTIFHFLFVPLSIGLVFMVALMETLYVVKGKEIYKKMSKFWGHIFLINFAVGVVTGIIQEFQFGMNWSDYSRFVGDVFGAPLAIEALLAFFMESTFIGLWIFGWDKLGKKLHLACIWLVSIGTIMSSFWILAANSFMQHPVGFEFKNGRAEMNDFLQLITNGQLLVEFPHVIFGAFATGAFFIAGVSAYKMLKKQDVAFFKRSFQIAMVMAVIGGFGVAFSGHSQAQYLVKTQPMKMAATEGIWEDTADPAPWTMIAKINPEEKKNEWEVNVPYALSFLSYGTLTGSVEGMNTLQKQYEEKYGEGDYIPPVKTAFWSFRIMVGAGMLMILFALIGIVLAWKKKLVNAKWYLRFMIPMIGFPFLANSMGWIMTEIGRQPWVVFGYMKTADAVSPNVSSGQILFSIIAFSTIYTILAILLVYLFIREIKKGPDGHKPEKAEISVDPFDKGDESFVTK
206094..207107                     hypothetical; PP_00232                                                               N/A                 LSLNELWFLLIAILFIGFFFLEGFDFGVGMSTRFMARNALERRVLVNTIGPFWDANEVWLLTAGGAIFAAFPNWYATMFSGYYIPLVFLLLALIGRGVSFEFRGQKDSPLWIKTWDWVIFFGSILPPFLFGVLFASLIQGMPINSDMDMYAGFFDYITVFSVWGGVTITLMCLLHGLLFITLRTEEDIQDRARRMAKRVWFITVPALVIFVVLAYFNTDMFQVRPVLVPLMIGIVVVMYVLSALFIWKDRDILAFTFGGLGIVFTIATIFVSLFPRVMISSINSAFDLTIENAASGQYSLSVMTIVAVTLLPFVLGYQIWSYYVFRKRVSSKEKMTY
207107..208831                     PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; PP_00233; phage(gi9630145)           4.63e-14            MGKDLRNYKGIKKIMAILAVFTLVQGAAIIVMAITLARAITDLFHEHPFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPRFARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILMITLPILIVFMIILGLAAKKQADSQFETYRVLSNHFVDSLKGLETLKYLGLSHDHEGKIASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLIDGNMNLPIALSVLILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQAKAEKPETNALPLTTFAENTEFSFENITVKHGADNADSLHEANFTVKGFEKIGIIGATGAGKSTLIDVLSGFLTPTSGDFRWNGESGVSLASSDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTDEEMKKAAESAGLNKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPIVLMDEPTAHLDIETEYELKKPMLDLFEDRLVFFATHRLHWMLEMDRIIVLDHGAVVETGTHEELLLRKGFYYNLVKAQLEEV
208831..209412                     hypothetical; PP_00234                                                               N/A                 MRKXSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLISKSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEPQALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFAALFVLLIGLLVLVLPWVSLLYARGKNAYLKLIH
complement(209615..210034)         PHAGE_Lister_A500_NC_009810: TerS; PP_00235; phage(gi157324961)                      1.06e-16            MDGRKADEGKFKKELLEEYDELKIQLEELEDSVSEIYEENSTSKRDLLWHKDWKEILSLRAQILQDLFDRSGYKETKDMQDRRVALLDAQINKLELEAKKDCKDSGFATIIMSNVDEMQAYLDKKAGGTDERDDTQTTN
complement(210040..210411)         PHAGE_Staphy_TEM123_NC_017968: phage terminase small subunit; PP_00236; phage(gi388570350)     5.37e-15            VKTEEKYKIFAKTYVMNGFNGKEAAISAGYSTKTAEQQASRLLRNVKVLELIDEEMKLLSKRMQDDASKIYAELWKQVRMIDDKMAKHEEASRKLSITDARKITAIADINNLKAKIRRTESKN
complement(210457..210732)         hypothetical; PP_00237                                                               N/A                 MDRLLFRAEPKKLSNIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL
210686..211144                     hypothetical; PP_00238                                                               N/A                 MFDNFLGSALNNNLSIKLGTNNICLKLISKLNLLLFTGVIIKTFGFPSLIIIPFFLLTNECLNNMVSLFLFSLLFNFIAQNNAPTVANPLTQSAKLPTSSIKLICNTLLFFTIPNKNHLLNFQQMERAIYLKNWLTHQSAPHACFTSSMDRI
complement(211362..211796)         PHAGE_Lister_A500_NC_009810: gp62; PP_00239; phage(gi157325021)                      2.84e-103           MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
complement(211815..211979)         PHAGE_Lister_A500_NC_009810: gp61; PP_00240; phage(gi157325020)                      1.91e-28            MQIEKLNVFTRETICDGKDVEIANYNIEFEAISEESFIDTAEKVEKIREFIENL
complement(211990..212115)         PHAGE_Lister_A500_NC_009810: gp60; PP_00241; phage(gi157325019)                      1.12e-17            MIDKVAKFIGAVTIYTLWVLVLIFVLGLAVKGILWIWGNMF
complement(212108..212491)         PHAGE_Lister_A500_NC_009810: gp59; PP_00242; phage(gi157325018)                      2.94e-79            MTVMEITKSKARQREIISYIANNDVELDELLKLQKELNQLMNENTIEKQKTYWTKTFDRIVKKKKWAEITIREFADLRNAGLTCYAIAEHFKVSKAVVFNYTQRNKKEYYQIFDMNEYQKNKEIWND
complement(212495..212770)         PHAGE_Lister_A500_NC_009810: gp58; PP_00243; phage(gi157325017)                      3.46e-52            LKLLKMSGEVVSFDLQPEFVLQESFRKNGKLYRAIKYKADFLVRYSDGHEELIDIKGMLTKEFRIKQKLFELRYMQSIKCLKLKGRNFVEV
complement(212844..213026)         PHAGE_Lister_A500_NC_009810: gp57; PP_00244; phage(gi157325016)                      6.42e-25            MTADTAIKKLRNRSMSIRQMANAIAEVTNYQISEIESMGDEEIEAKYTAFVINEANEYAK
complement(213045..213524)         PHAGE_Lister_A500_NC_009810: gp56; PP_00245; phage(gi157325015)                      1.26e-102           MNRVVLVGRLTKDPDLRYTPAGVAVATFTLAVNRTFTNQNGEREADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEDNDGKRVFVTEVVAESVQFLEPKNNNVEGATSNNYQNKANYSNNNQTSSYRADTSQKSDSFASEGKPIDINEDDLPF
complement(213524..213724)         hypothetical; PP_00246                                                               N/A                 MFERGGGMKYKITYLSQEVYEVEAENEEEAIRIAEFNPMYRPDAHIKLIEDENLLDCELMKEREDE
complement(213807..213974)         hypothetical; PP_00247                                                               N/A                 MKHKIVQVGFLADKGEELIKLLDDGWKILTATYVGDNIEQMGGLVQYVLRKEAEE
complement(213971..214414)         PHAGE_Brocho_A9_NC_015253: gp39; PP_00248; phage(gi327197682)                        2.15e-20            MLNGTDGERWGAFERFDTKEEAIIYGVELLTEYNSLDDDERRDYDLSDGLNMRPLDYENIYTFFVGQIEEVEFPTEVDTLLENIAQCVYDEVGECGEEYLNDVTQEHKEQLSDLIYEWAKQRDYLPACFKIEMVEEIDIRSFEEVAE
complement(214429..214899)         PHAGE_Lister_A500_NC_009810: gp54; PP_00249; phage(gi157325013)                      4.81e-74            MKQEELDIILENHGKWLFNEGGDRADLSNADLKNTNLRFANLRLADLRGADLSYANLRFANLSNADLSYANLSNVNLNWVNWQHVEGLTVICVQVDTTRKNNQIAYIKELDIWITGCFQGTLDELKASVEQTHGDNEKLRKRYYRVIDFILKEVAE
complement(214896..215339)         PHAGE_Lister_A500_NC_009810: gp52; PP_00250; phage(gi157325010)                      3.95e-58            MRAIGFRAFVKRKKKMLPVTDLCFNETEAVGVSGCGNAKCTLCVDWYSFDDVVLMQYTGLKDKNGKKIFEGDVVTAFSNINKYTDSFAGDVEPTFCFTSIVYDGACFKTTYKGEPSYVLNQNGSSLVKHMEVIGNIHENPELLEGTE
complement(215336..215533)         PHAGE_Lister_vB_LmoS_293_NC_028929: hypothetical protein; PP_00251; phage(gi971756932)     2.69e-38            MELYAIVDEDLQVAKHRSKGTLAVFKDLEMLKKHAWRYKESGKLYKIAELEPINFFSFEEAEGEA
complement(215536..216132)         PHAGE_Lister_LP_030_2_NC_021539: DUF1642 domain containing protein; PP_00252; phage(gi514051973)     9.97e-66            MRFKEGDKVQFIENNELIIGTIKRVNNDVGWVDLKVSDLSWFFRKLEDVVKVKEPELIVVPRFAADWIKHCKQREYDLACLLDYEDSDMSAEMYEWLISSADNQELLARAWLDGYEVEKEPLYYVRLPLSTWNDDAAELEVINMYVLLNVQSDETSITGSIINENKEWRTKLTEAEIKGIPGGEIYWQFAVLVEEAEA
complement(216129..216902)         PHAGE_Lister_2389_NC_003291: methylase; PP_00253; phage(gi17488539)                  0.0                 LADLIIENMPEHKSYLEPFCGSCAVFMNKQKATLETINDLDGRLVNLFKAMRDNPEKLQYLIMHTLYSREEYMLSQEITSDSLEDARRMAVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAIKLIEQHNDKDTLIYCDPPYVATSLASSHYQHDFSLEQHKELLKVLKNHDGKVMLSGYESELYKQELSDWPVLKTMTKVGITSEKKSDRQEIIWCNFEPPMQLNLFKEEKA
complement(216938..217849)         PHAGE_Lister_A500_NC_009810: gp45; PP_00254; phage(gi157325004)                      6.18e-90            MSHGWVKLHRDLKEKPIWRSSTPEQKTILVTLLMMANHKENEWEWMGKPFKAKPGEFVTSIKSITAECGKGISSQNVRTALKRFENYGFLTKESTKVNTLINIVNWGVYQESENKPNTLANNQLTNDSQTANKQLTTNKNVRTKECKNNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVTSEQGANKRNYAYVNKILKNWESRGFKTIADVDAAEKQRQIELEQKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA
complement(217887..218798)         PHAGE_Paenib_Fern_NC_028851: DNA recombinational protein RecT; PP_00255; phage(gi971749448)     5.97e-48            MNNELIDTQNNYEVANFDEEKLRTMQQTIAKNSTPQEFELFVQVCKNSGLNPFLNHVYFIKYGNQMNIQISVEGVEYLARRSEGYRGIDVQLVHEKDEIRFGRNEQGVMTVTKHEFGFPRGKVTGGYAIARKENFPDFVVVMDVEEVEHMKNGNNKATWCKYFNDMFKKHLIKRAAKTQFGIEIGEDEMLPSNGIENEQEYNPGQRKDITPAQKTIETDEENTVTEEDAKATQWEIIKEKLETYNLKRTYLSDLIDSKFNVKPDELSAQNLVALTKIIDLEQKDLSKGVQPQEADLFDLELQE
complement(218791..219105)         PHAGE_Bacter_Lily_NC_028841: ATPase; PP_00256; phage(gi971748303)                    3.07e-18            MVEKVNGLFENITIKLYEVLKNGTEKPTFEVEWQRKPYSKLSTAEKIIAGIEFANALSLKAETMVPLFADNAESVIELPKPTGQLITATVKKTKFTVKGVSENE
complement(219203..219370)         hypothetical; PP_00257                                                               N/A                 MVEELEASKARLAKLENPEKNFDRIKYKEIDEKILELSGYIQSVSQTENLQQKNC
complement(219498..220301)         PHAGE_Bacter_Lily_NC_028841: ATPase; PP_00258; phage(gi971748303)                    1.33e-51            MKIVFKQLTLENFKNHKNLVVDYEQVTQISGKNGFGKTSVGEAVTWLLYGTDLLGTKIEPQPLGTEEEVHVSLLINADGKDLLLTKKQKKTAKYAINEVPRKATEFADMIDSLFEKNLFYSLYSPGYFFSQHWQTQREQLLSYVTEPGEKEVLEEMNEIDRTLLSTELNKHLLDDLEAVNRETFKNSDKQYERASERVLTLKEQLSNASEVNMDIQEITEQKDALIAERTAIESEEDKNVQLRIDYADAEQKINALKERILRKEKKH
complement(220398..220526)         PHAGE_Lister_A500_NC_009810: gp41; PP_00259; phage(gi157325000)                      1.81e-12            MVENPMIVDACWSSFERISQIWHNEYLEELERTNEEEAENEE
complement(220605..220793)         PHAGE_Lister_LP_030_3_NC_024384: hypothetical protein; PP_00260; phage(gi658607704)     3.89e-32            MTERVFRKQTIFGNSEIFIDDRTKMIANPAFRQKIPLIETGCEKMADYIEELKLKGYEEVTR
complement(220901..221137)         PHAGE_Lister_A006_NC_009815: gp38; PP_00261; phage(gi157325454)                      4.24e-52            MALVWGLDEFAKETGLEKSFARDCILNNPRFVDQLDITKGGFVVYADGKGKQWYIEPERMQEFVKENWIEIFRMKVKR
complement(221144..221668)         PHAGE_Lister_A500_NC_009810: gp38; PP_00262; phage(gi157324997)                      9.19e-119           MFQKSTSAPIAMQVLAETRTQKELAIDSYVTPALISNQLKGKRTVSLEQAEQLIDSYNEPQSTYLFAHEFSNGMIPPLLNGLDSHHAALTCRFELEVTEAVNALKSGLETMTFNLRKGDMLQREAAKQAISEITDVIATALTLNTSIAKAFNINLQQILESRDKFYQKNGLVKE
complement(221791..222564)         PHAGE_Lactoc_BM13_NC_021861: putative regulatory protein; PP_00263; phage(gi526244823)     5.67e-50            MTNLVVLQNNQPVTTSLNVAEVFEKKHKHVLEAIDDLRGAAENSADLFQESSYVHPQNKQTYRMIYMNRDGFTLLAMGFTGKRAIEFKLQYINEFNKMENHIKAQLDTSQLSPELQMFNQMFLAVANAEKEAKEVKEEVKNMKLIFSVNANEWREKVTVILRKIAANFGGAEPFRSIIQMSYERFESRAHCDLNRRLENRQTKMAAKGMSPTAIKKLNKLDCIAEEQRLIEIYLTVVKEMAIQFGIRSNELEALKVI
complement(222575..222763)         hypothetical; PP_00264                                                               N/A                 MNIRYLSKNHKKAKLHELEVTNKSITLDSFQLFGVTDFTIHSSVGNLTKLKLELLVKGRTYS
complement(222796..222999)         PHAGE_Lister_vB_LmoS_188_NC_028871: XRE family transcriptional regulator; PP_00265; phage(gi971750831)     1.65e-12            MRNRLIELRKSKTRREVSKDLKITPQMLGAIERGDRTPSLKLANKIANYYDVPIEDIFFDNKDTICV
223168..223644                     PHAGE_Lister_A500_NC_009810: gp33; PP_00266; phage(gi157324992)                      9.47e-55            MFSKRLSELRKKKGFSQYKLADELGFSRGQVANYEQGTREPDYQTLLKIAEFFNVSTDYLLGRDDNNLADTIAAHIDSNATEEDIKEILAYIEEKRKEHANEKEINITEIASKEDEEINKFVDENEDFKVVAARVMNDAEAVKAVKSFIEYYEQQKKD
223801..223968                     hypothetical; PP_00267                                                               N/A                 MKTLDELNVQHDIVILEHEFTSCSFTFKKEIFIVIDCRLSQSEKLEDIARLLNKI
224023..224673                     hypothetical; PP_00268                                                               N/A                 MIALFVLAGLFIFIGIMFLAASQLPGIALVEFAFAALFIWLALRIKRKKGTYVKFDTKTIPENSPQIKLNFGLAQQDLGFQIKSAAGTTYNMIQLIPSNKIIFLSKNGLVTNDEFYFVDYKWLGATYNTHTKTNSKAGKTIAGGVVGGLVGGGAGTVVGAVAGSSGKTNSTSTQIENKSKAIFYFYNKTKDIDLVTELNITSKDIVKLERFVKYVK
224657..224670                     attR                                                                                 N/A                 TTAAATATGTAAAA
224738..225868                     PHAGE_Lactob_phig1e_NC_004305: integrase; PP_00269; phage(gi23455777)                8.18e-81            MANIVKTETGWKYRVSYKEAGKYKVKSKSGFPTKKQALLAASEMEDKLHRGVDINAGESNFVEAFKEWYTTFRKQKKSIENDKHYDYAIKFCEKYFVGLKINDVNRTTYQKAINEFAKTHAKETTRKRHVYVRSFIREMVYEGVILRDPTARVIIPDDETTYKDLKALSEEQVKKLVKELNNHFNPAHSSISVILFAIASGARFSEIIGLTWDCIDFVQKTIKINKTWDYKDTNTFSNTKNYSSNRIITIDDNTLSMLNKIKVYQSAEKLKDSSFNKNKLVFINTNNVPPSNNAINKSLRRYCTKLGINNAISVHGLRHTHATLLLYNDCNIKYLSKRLGHNTIVTTLETYSHVIDEMEQKESYKVNELMNKINEI
complement(225954..226025)         tRNA                                                                                 N/A                 GCCCTCGTGGTGCAACGGATAGCACGTAAGATTCCGGTTCTTAAAATGGGGGTTCGATTCCCTCCGAGGGCA
complement(226145..227293)         PHAGE_Bacill_0305phi8_36_NC_009760: virion structural protein; PP_00270; phage(gi156564148)     4.13e-07            MIFVSLTVEWTLTAPHKTSSWQYFITKKGWDPNKPLTRSSLEPLATIEADGSVPNALAKQEINIPNDRSGYYVILGVWNIADTGNAFYQVIDANIINSDITPVADTEAPTKPTNLAATTTTKTVSLAWNASTDNVGIKGYEILRDGVVIGESQTASYEDTTVESNTAYTYTVRAKDFAGNKSTLSNSINVTTKEVPAVDNEAPTAPKSLMSHGQTDTTIALCWQASTDNVEVKNYEIYRNNTKIATSTKTMFEDTKLASNTSYNYKVYAVDTSGNRSLVSNEITIKTKTLDPLNTWKSDQIYNAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASTDIQTWNVQKAYNGGDKVTYNGKTYQAKWWVRGEKPDSSSIWTLLN
