gi|00000000|ref|AB716350.1|  Staphylococcus aureus DNA, pathogenicity island, strain: 13477, gc%: 29.71%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1..15                              attL                                                                                 N/A                 TCCCGCCGTCTCCAT
complement(348..1463)              PHAGE_Bacill_phIS3501_NC_019502: phage integrase; -; phage(gi422934298)              1.35e-95            StaphylococcusaureusMIAIKHNLNLSHNIYKDTKRGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGQLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSIDVFKMTTQDVMKFQNKKLKEGYSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYGALVTQQQKLFFKLLFYSGARKGEIRALTWRDVNFEDEFIHINKTDYHGEVTAPKTKSAIRDIYLPTHMMDDIKDYLIWHKENNIYKDDYVLFGTFFKAYSESTIDRWFTTALKVLDDQLPDGQTFPRIVIHELRHSHASMLVNHGASIMVIAQRLGHADSNEVYNRYGHLYPSTQKEIVKYL
complement(1469..2206)             PHAGE_Staphy_96_NC_007057: ORF061; -; phage(gi66395939)                              1.11e-08            StaphylococcusaureusMIIFRLKEIMEEKNLKISDLHEQTGISRNSISSLLNGKTRGIQFDTLEKITLALNVDVADLFKNVFNELIIKLDDISKVETYRRSKKFKEKKNIIVKKYAVNCDLIEDNDLKKGFIPYEISIELNPNPEIEIKIQFDYSNLFNYLIKFLEDCNNFKLLLVNYLSKKIYCLENKRINEIKSFYSIPDEKVYILSSFPGIFIRRPLRDNNGILENIELNKIVNEFNFNSNYNYTYSDQIILTHKNKK
2358..2576                         PHAGE_Bacill_phiCM3_NC_023599: transcriptional regulator; -; phage(gi589892743)      2.21e-10            StaphylococcusaureusMTKLAYPMLYITRKEKGDTQKKVASKLGISPQRYQLKESGKAIFNLNECQILSEMYDMPIDELFSSKIKVGE
2588..2734                         hypothetical protein; -                                                              N/A                 StaphylococcusaureusMKLNLFYITLTSLLTILLLAISNMYVAFSVYGMMVTYGFNLTGGLENE
2727..2951                         PHAGE_Staphy_3MRA_NC_028917: superantigen-encoding pathogenicity island protein; -; phage(gi971755515)     3.55e-09            StaphylococcusaureusMNNEQKEVIQDIYNTLEAVAYNTSMEYIHNCVDGKKEWMENVNREEHLQAIIEWALQQIENNFDFENDTEMEEL
2952..3251                         PHAGE_Staphy_PT1028_NC_007045: ORF016; -; phage(gi66395180)                          2.98e-40            StaphylococcusaureusMNWEIKNLMCDLKILKEKFEDLKDNHGSHFEDLYLHEPNHTLNKDDVIKEGFSYHERRIHNDQMFDLLLLYTEKFDELITRFDALEKASSFADQSQDNA
3344..5716                         PHAGE_Lactoc_98201_NC_031064: hypothetical protein; -; phage(gi100015)               2.44e-121           StaphylococcusaureusMAIKKKDKIIGVKELEIPHEMKLVPNWVLWRAEWNEKQQNFGKVPYSINGYRASTTNKKTWCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCEKSPSGTGLHCFFKGKLPDNRKKKRTDLEIELYDSARFMTVTGCTIGQSDICDNQEVLNTLVDEYFKENLPVNDIVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSEAVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTVYTKSIDEFNVIQQGSKDIKQLLNQLGHEERTKMEEKWIEGGKRGRKPTTISPIKCAYILNEHLTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKIDTSYVRQDIVPEINGWNIDRWIEEIACNDNQVVKLLWQVINDSMNGNYTRKKAIFLVGKGNNGKGTFQELLSNVIGYSNIASLKVNEFDERFKLSVLEGKTAVIGDDVPVGVYVDDSSNFKSVVTGDPVLVEFKNKPLYRATFKCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKENFKIKEDYIKNPQVLEYVLYKAINLDFETFDIPDASEKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDENGYNALSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEPIESGKNYKSYEKVKLKAI
6404..6748                         PHAGE_Staphy_PT1028_NC_007045: ORF013; -; phage(gi66395177)                          1.97e-09            StaphylococcusaureusMNRNRMKQIILEYIKNNDSTSFVEIENVFEEQGFKYKGNGAYTSGNHKNIIFWVGWNEEAFNIVADLKRDGLIEMQICPPMYYLIDGKGLKLPIVKNKNIKIDHWLPVTFSLVN
6973..7179                         hypothetical protein; -                                                              N/A                 StaphylococcusaureusMLDHTNESVKRVFKYRDKQELLNKYHELLDKYFLHNISFYEEDKNNERIYGLVVHTKNKLGDEDYERV
7166..8224                         PHAGE_Paenib_Harrison_NC_028746: major capsid protein; -; phage(gi971482315)         2.63e-16            StaphylococcusaureusMKEFKEQFGYQLSNFDDMDIKGYANLYQKDIGKDVSMIEQGLKQLSITETEVLLPEQINRKLLGVLNMNEVNQSSNTWVGTLTKQLVSSENNFNIQELPTARKEVFKELLVNCELPQSLREVITITDDEHVESIPSLTYIKDKLATNGIELSLNGSSKYFDRREGHIYTEVSDSVVHGSDRTLDDLLKEIFINECVAYETTLLLDKNNSSGLIDKGNQDLSLYNQGIKEVSNTSIYDGIKQAMKDIPQTFRRNVSIVMNTEHHDKLIKELAQMGLGGLAGDLSNLFNVTNVVVTDDAHDVFVGDFGHAIYAKYEPIMYNKKKQALKGIYQFALNYVFDIKIIPELLRIVNIK
8402..8893                         PHAGE_Staphy_PT1028_NC_007045: ORF010; -; phage(gi66395174)                          7.99e-32            StaphylococcusaureusMVSDFESNDKITEVELLMHYNPKVINSKIKAMRSQIESLYHLNMNHVITNDNDMLVSVSYPLDKLVLYIIEEKDKLEYYMKTAQDRLNLFKDIIKNYSENEQQDVMRYMLSSGKVKNEGVIERLKVDIYKVESRKRQERQNQREELHRIEFNKHLEQVKKELS
9322..10290                        PHAGE_Strept_phiARI0131_1_NC_031901: DNA topoisomerase II large subunit; -; phage(gi100005)     1.90e-32            StaphylococcusaureusMKPFESHNKQLKILRRRGMEVPSSAKRDLENENYYNIINGYKDLFLELDVNGNFLVPDKYKQGTHFKEVFSLYKLDRKFRNVLLEYLLVFETHIKSRISYYFSEKYREPHSYLYFKNYSSDTSKTDSIVKMVATFSSVMSNRKNKPLKHYINTHNGVPLWILVNYLTLGNVSKMYSNLDDDLRLEVAKDYKRKLERDYKTRVQITPSDVDSILQQAHMFRNVCAHEERLYDYKIDRAKSRANIFANYNKIYDKEYVPTMNGSYVFDLLISLCLFLNKHDYIKLMKNMDKLISNYSHSFYTITIDDLYTKMNFPDQTKILDML
10515..10709                       PHAGE_Strept_DT1_NC_002072: hypothetical protein; -; phage(gi9632417)                2.56e-05            StaphylococcusaureusMAKKVKLSNQQAHRFMKVSEEYEGSNLTTSLNLGLNVLYQIATLPEPERSKEHITSNGETKIPY
11447..12247                       PHAGE_Strept_315.2_NC_004585: streptococcal superantigen SSA; -; phage(gi28876204)     1.41e-95            StaphylococcusaureusMYNRLFVSRVILIFALILVIYTPNVLAESQPDPKPDELHKASKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSEKTNDINSHQTDKRKTCMYGGVTEHNGNHLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIESENSFWYDMMPAPGDKFDQSKYLMMYNDNKLVDSKDVKIEVYLTTKKK
complement(12325..12882)           PHAGE_Staphy_71_NC_007059: ORF024; -; phage(gi66396064)                              3.14e-82            StaphylococcusaureusMNKKLLTKTLIASALVLTTVGSGFHSSSNYNGINNVAKAEQTTDRDLWKNVRDALKEANIIDNTANETVGVTYNLNNGAEHSITGTADLDELSTSNNSTVNTDSVNSVDITRVNPNGKTIDANEAWKKLTDKLKEKNIVKDGDTVTIHSNDKGDPQISAKVGSDYNGNNRFMLNQRDITKITITK
13463..13477                       attR                                                                                 N/A                 TCCCGCCGTCTCCAT
