gi|00000000|ref|AE015928.1|  Bacteroides thetaiotaomicron VPI-5482, complete genome. 6260361, gc%: 42.84%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
5208050..5208061                   attL                                                                                 N/A                 ATTCTCAAAAAA
5208126..5209094                   PHAGE_Arthro_vB_ArS_ArV2_NC_022972: tape measure protein; BT_3996; phage(gi563398126)     7.55e-23            BacteroidesthetaiotaomicronVPI5482MRKVYYIYNPRTQTYDRIYPTVRQRALSILRRLFIGMGLGAGCFIVLLLVFGSPSEKELRIENSRLLAQYNVLSRRLDDAMGVLQDIQQRDDNLYRVILQADPVSPAIRQAGFGGTNRYEELMDLANSKLVVNTTQKLDVLSKQLYIQSKSFDDVVDMCKNHDEMLKCIPAIQPISNKDLRKTASGYGTRIDPIYGTTKFHSGMDFSAHPGTDVYATGDGTVVKVGWETGYGNTIEIDHGFGYLTRYAHLQSYNTKVGKKVVRGEVIGKVGSTGKSTGPHLHYEVHVKGKVVNPVNYYFMDLSAEDYEKMIQLAANHGKVFD
5209116..5209457                   PHAGE_Clostr_c_st_NC_007581: hypothetical protein; BT_3997; phage(gi80159874)        9.12e-05            BacteroidesthetaiotaomicronVPI5482MLNTDKELKLYYSIAEVADMFGVNASLLRFWEKEFPQISPRTTGRGIRQYRKEDVETIGLIYHLVKEKGLTLPGARQRLKDNKEATVRNYEIVNRLKGIKEELLAIKKELDGR
complement(5209459..5211702)       PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; BT_3998; phage(gi100024)         1.39e-11            BacteroidesthetaiotaomicronVPI5482MDNITPKEIADEEMINQAFQELLNDYLHTKHRKRVEIITKAFNFANQAHKGIKRRSGEPYIMHPIAVAQIVCNEIGLGSTSICAALLHDVVEDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILIKIADRLHNMRTLGSMLPNKQYKIAGETLYIYAPLANRLGLYKIKTELENLSFKYEHPEEYAEIEEKLNATAAERDKVFNDFTAPIRTQLDKMGLKYRILARVKSIYSIWNKMQTKHVPFEEIYDLLAVRIIFEPRNVEEELNDCFDIYVSISKIYKPHPDRLRDWVSHPKANGYQALHVTLMGNNGQWIEVQIRSERMNDVAEQGFAAHWKYKEGGGSEDEGELEKWLKTIKEILDDPQPDAIDFLDTIKLNLFASEIFVFTPKGELKTMPQNSTALDFAFSLHTDIGSHCIGAKVNHKLVPLSHKLQSGDQVEILTSKSQRVQPQWEVFATTARARAKIAAILRKERKANQKIGEELLNEFLKKEEIRPEEAVIEKLRKFHNFKNEEELLAAIGSKAITLGEADKNELREKQTSNWKKYLTFSFGNSNKEKPEEKEPQEKEKINPKEILKLTEESLQKKYIMAECCHPIPGDDVLGYVDENDRIIIHKRQCPVAAKLKSSYGNRILATEWDTHKELSFLVYIYLRGIDSMGLLNEVTQVISRQLNVNIRKLAIETNDGIFEGKIQLWVHDVEDVKTICNNLKKIQNIKQVNRVEE
complement(5211775..5213070)       PHAGE_Ralsto_RSB2_NC_023736: putative internal virion protein D; BT_3999; phage(gi593779940)     7.94e-13            BacteroidesthetaiotaomicronVPI5482MKKLENYCSIIFLFLLATTQVKAQSVDVVIRENGTERKESIDLPKSMTYPLDSLLNDWKAKNYIDLGKDCSTAEVNPLFSDSVYIDRLSRIPAVMEMPYNDIVRKFIDMYAGRLRNQVSFMLSACNFYMPIFEEALDAYGLPLELKYLPIIESALNPSAVSRAGASGLWQFMIGTGKIYGLESNSLIDERRDPIKATWAAARYLKEMYDIYGDWNLVIAAYNCGPGTINKAIRRAGGETDYWKIYNLLPKETRGYVPAFIAANYVMTYYCDHNICPMETNIPASTDTVQVTKNLHFEQIAELCNVPLEEVKSLNPQYKKQVIPGTTKPCTLRLPQGAISTFIDKQDTIYAHRADELFRNRKTVAVKEVTPTTRRQTSAVAGKGKLTYYKIKSGDTLSSIAEKLGVRVKDIQQWNGMSNTRIAAGKQLKIYK
complement(5213104..5213991)       conserved hypothetical protein; BT_4000                                              N/A                 BacteroidesthetaiotaomicronVPI5482MTRKSKKYQLPIITLLLCFLQVAGIDVYAQEPVTPVQKDSIIQSREAPKARARRHRDPAQVMDSLKKDSIKILHPERLQATDSLSAVKIQIADSLDAANKKELKKIEQPAPIVVKTDTVPPVQDLNKKLFIPNPTKATWLAVVFPGGGQIYNRKYWKLPIIYGGFAGCAYALSWNGKMYKDYSQAYLDIMDSNPNTKSYEDLLPPNAQYNEEQLKNTLKRRKDSFRRFRDLSIFAFIGVYLISIIDAYVDAELSNFDISPDLSMKLEPTVIDNNSQFRSNSYKNKSVGLQCVLRF
complement(5213992..5214882)       PHAGE_Gordon_Nyceirae_NC_031004: hypothetical protein; BT_4001; phage(gi100046)      1.99e-14            BacteroidesthetaiotaomicronVPI5482MATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPAPIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKRSKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK
complement(5214894..5215841)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; BT_4002; phage(gi22091150)     2.40e-28            BacteroidesthetaiotaomicronVPI5482MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLEYMGKIIALANQKGGVGKTTTTINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECTIYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEMLNLPNREKILKEVLTPLKKEYDYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIEGFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGAKNHLALAKEIINRNK
5216019..5216798                   stationary-phase survival protein SurE; BT_4003                                      N/A                 BacteroidesthetaiotaomicronVPI5482MESKKPLILVSNDDGVMAKGISELVKFLRPLGEIVVMAPDSPRSGSGSALTVTHPVHYQLVKREVGLTVYKCTGTPTDCIKLALGSVLDRKPDLIVGGINHGDNSAINVHYSGTMGVVIEGCLKGIPSIGFSLCNHRPDADFEPSGPYIRKIAAMILEKGLPPLTCLNVNFPDTPNLKGVKVCEQAKGCWVNEWVTCPRLDDHNYFWLTGSFTDHELENENNDHWALENGYVAITPTTVDMTAYGFIDELNGYCQQLEF
5216850..5217986                   lipid-A-disaccharide synthase; BT_4004                                               N/A                 BacteroidesthetaiotaomicronVPI5482MKYYLIVGEASGDLHASHLMTALKAEDPQADFRFFGGDLMAAVGGTMVKHYKELAYMGFIPVLLHLRTIFANMKRCKEDIVAWNPDVVILVDYPGFNLNIAKFVHSETQIPVFYYISPKIWAWKEYRIKNIKRDVDELFSILPFEVEFYTLKHRYPIHYVGNPTVDEVTAYQKAHPKNPEAFLADNNLEDKPIIALLAGSRKQEIKDNLPDMLKAASAFPDYQLVLAGAPGIAPEYYKQYVGQAKVKIIFAQTYRLLQHAEVALATSGTATLETALFRVPQVVCYYTPIGKVVSFLRRHILKVKFISLVNLIADREVVKELVADTMTVGNMQNELKKLIEDQEYKNRMLAEYEYMADRLGPAGAPQHAARKMLELLKK
5218078..5218854                   conserved hypothetical protein; BT_4005                                              N/A                 BacteroidesthetaiotaomicronVPI5482MKKFNWLLVMLLLALVPALQSCDDDGYSIGDIGWDWATVRATGGGGYYLEGDRWGMIDPVASSIPWYKPVDGERVVAFFNPLADTDKGAQVKIEGIQEVLTKEVEDMTAENEEEFGNDPIVIYQGDMWLGGKFLNIIFHQYLPRSEKHRISLVQNKIEPEAPETPEALNVDEDGYIHLELRYNTYDDVTGYRGWGRVSYNLEEFYPTAKDAAETEFKGFKVTINSKENGEGRVIVLDLDHPVGVPEKAKDVHSTSFVK
complement(5218967..5219809)       phosphatidate cytidylyltransferase; BT_4006                                          N/A                 BacteroidesthetaiotaomicronVPI5482MISNFIKRAITGILFVAILVGCILYNSFSFGILFMAISALTIYEFGQLINSRAEGVNVNKTIIMLGGAYLFLAVMGFCIDAADSKIFIPYLLLLLYLMISELYLKKASSMLNWAYSMLSQLYIGLPFALLNVLAFHTDPEYSSVSYNPILPLSIFIFLWLSDTGAYCVGSLIGKHRLFERISPKKSWEGSIGGGVVAIGASFVLAHYFTIMSMWEWAGLALVVVVFGTWGDLTESLLKRQLHVKDSGTILPGHGGMLDRFDSALMAIPAAVFYLYALTWF
complement(5219826..5221916)       PHAGE_Phormi_MIS_PhV1B_NC_028998: hypothetical protein; BT_4007; phage(gi100001)     3.15e-26            BacteroidesthetaiotaomicronVPI5482MPKFNLNWLYMIIALMLLGLWWSSDSRGSGSKVVPYSDFQKYVTNGYISKVLGSEKTLEAHVKPNAVGAIFGADSTKVGRNPIITSNPPSKDRLDKFLQDEKAAGHFDGIADYPADSDIFPAILINILPLVLLIALWIFFMRRMSGGGGGGAGGVFNVGKSKAQLFEKGGSIKITFKDVAGLAEAKQEVEEIVEFLKEPQKYTDLGGKIPKGALLVGPPGTGKTLLAKAVAGEANVPFFSLAGSDFVEMFVGVGASRVRDLFKQAKEKAPCIVFIDEIDAVGRARGKNPAMGGNDERENTLNQLLTEMDGFGSNSGVIILAATNRVDVLDKALLRAGRFDRQIHVDLPDLNERKEVFGVHLRPIKIDDTVDVDLLARQTPGFSGADIANVCNEAALIAARHGKKFVGKQDFLDAVDRIIGGLEKKTKITTEAERRSIALHEAGHASISWLLEYANPLIKVTIVPRGRALGAAWYLPEERQITTKEQMLDEMCATLGGRAAEDLFIGRISTGAMNDLERVTKQAYGMIAYLGMSDKLPNLCYYNNEEYSFNRPYSEKTAELIDEEVKRMVNEQYERAKKILSEHMEGHNELAQLLIDKEVIFAEDVERIFGKRPWASRSEEIMAAKESQDAARAERELAEKLKAEEQEIKEEEAKNSAQEEATTETKITAEGKKVTVEGKVTIEAKSNEKEQTTESK
complement(5221980..5222339)       conserved hypothetical protein; BT_4008                                              N/A                 BacteroidesthetaiotaomicronVPI5482MNDTKILIEKIKEGIQEKKGKNIIIADLTSIEDTICKYFVICQGNSPSQVNAIVDSVKEFARKGADSKPTAIDGLRNAEWVAMDYSDVLVHVFLPEVRSFYNLEHLWADAKLTQIPDLD
5222604..5222677                   tRNA                                                                                 N/A                 TGGGCTATGGTGTAATGGTAACACTACAGATTCTGGTCCTGTCATTCCTGGTTCGAATCCAGGTAGCCCAACAA
5222828..5222839                   attR                                                                                 N/A                 ATTCTCAAAAAA
5222847..5223959                   PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; BT_4009; phage(gi100066)         6.09e-06            BacteroidesthetaiotaomicronVPI5482MNQKKQTFNVLFWIRKGRTNEKMSPLSCRVTISGQRYEIPTKLHLRSESWSAVAQKSLGKTANDKEVNRYIEDLKITIEDTIAKIRQKSYPLNIENFKLMFQTQDNEFSTISTLFDYHEIMEKKNLRTSTFIGYHVTKKHLLNFIRIKYHVSDYDLAAVDKAFVYEFYAYLQGYRREGDTVCAVNGALKHIQRFKKVMNVALQNEWISRNPVCLLNAKKTKVERGFLSEKELKSLEEVPLPANLSIVRDVFIFAVYTGLSYVDIENLTNENINVGIDKSLWLSYYRQKTDIHAILPLLQPAVNILKRYEAYHEGKRNNHIFPVPLNQVMNRYLKKVAKQAGVDKNITFHCARHIELPLSLNLNRLQRLVS
