gi|00000000|ref|AE017226.1|  Treponema denticola ATCC 35405, complete genome. 2843201, gc%: 37.87%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1175279..1175294                   attL                                                                                 N/A                 AACTCCCGCATAGCCT
complement(1182958..1184901)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; TDE_1145; phage(gi100013)       5.70e-18            TreponemadenticolaATCC35405MLVTNFAGGEVSKNLYGRIDLPIYQNSVSRLENFDIMQTGGIKRRGGTERIGKLKGYARLIPFIVNNTLSFIFEIGSEYIRIWKNGSLLTLAGFPVEFSPTPDLPLYQKSDLSEIQYAQTYDSLYLAHRHYKPYVIKWQGGDAFTFGSLNITGNAHKLPFQGSDNYPSCVALFQGRLFFASTIREPQKIWASKVFEYENFTYFDTVVSKTTQLKNPDLRVFSAKAVKDSDVLTELTKDFTDITNITDYYVSGHKGIPKDTKVLSVTSDSMKISKPATVDKEDIVLSIHLWRNADSPQADDYKDTEIINNVTAPDHAFYFEIGSDKNDKIKWITPSKDLIIGTESSEWVMSDGVTAQRIEVQLQSRYGVADLQGSLIGRSVIYIGQGGRSLRDYAYDFQEHTYKSIDLTQAASHLLIESKAVDFDYTNSPVQKIYLSLEDGSACVLLYDKNTGIAAWTKIVLGNGKIKNIVTVPGLKGFDDVYFEVERKGIFYLEKITETEKDKTIYLDSFSKYTSETKPDEYELSSVFIPKEKKIFKLEELPDEYKDFSKEMYIGYEYTSTVESLPVINSADNNKKRIAALLIRFLDSYLPLVSQTETREQTIYEDEPFSGVVSVPVEGNFNRDVFFKLEMKRPERCEILAVNANLA
complement(1184914..1185504)       PHAGE_Vibrio_VP5_NC_005891: major tail subunit; TDE_1146; phage(gi48696686)          5.62e-07            TreponemadenticolaATCC35405MNIDRQLANRALSAVGEPQLNETDKESKSFLLVKKFYLPTMLESLEMIPWTSGKKRARLEKDLSENHTDYSGAFKLPIDCGKIIELKDKSYYIVEGKTLYTDAAEAVLLYITNGKLPEGMGNVDDDFPDYDPPEYEAMFYQAFELRLASKFALELSGKPELHKMLLQEAAMIEEAAYRNTKTLSAGKKKGNSWWFD
complement(1185619..1186050)       hypothetical protein; TDE_1147                                                       N/A                 TreponemadenticolaATCC35405MAKKNKTKNEVREELKASNPHFTDEQIDELLEESFDGEDTASDETSGGAETGDAAALRAELEAERAELEKEKEALALERAELEKEKAKLDKELTSLNETLDTAITGEEKEYVCNTACTFDGAYYKAGDILVTSKETSEFFDPV
complement(1186064..1186447)       PHAGE_Bordet_BPP_1_NC_005357: hypothetical protein; TDE_1148; phage(gi41179377)      8.21e-10            TreponemadenticolaATCC35405MINLYLDKRLELSSDQAITTTAESQNAIDFGTDSCSADGKRIDFRIKEKFQGGTSLKFILQDSANGTSFDDKLTSTTFNTAVLVESQKEPFYSLVIPKGLRRYIRVKYDVQGTFTKGKIHAILNTEM
complement(1186516..1187478)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; TDE_1149; phage(gi100008)       9.27e-50            TreponemadenticolaATCC35405MPNLSMTDSMTALEVMRRANNQDGFHIVELMAQTNEILKDMPMIEANDGTIHNTLVRTSLRSGTHRKYNEGIAPGATTTDTIRDRITMLEDYSIVDKDLADHSGNVKALRASEADAFLQGMGQTQAEELIYGDHGRNEAEINGLAVRLNKLTNKNVINAGGSGNKCTSIYVCAIGNRFAHLIYPRGRKDCGIKTEDMGLQNWPMEQGKVMPAYVQFFSTHYGLSIAHPDAVKRICNIDNTVPGDKIVEMILEAMLRLPQGAQGVSIYCNQDILVKIDKAAWSKGNAVFTKEDPWGDMITHIRSGRCRRVDAILSTEQALV
complement(1187491..1188333)       PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; TDE_1150; phage(gi100007)       5.55e-05            TreponemadenticolaATCC35405MGELDQNNGNQTPQGNGSGETQATGTSVLDAFKGAGTGSNQNPATKGDENAKGGQANKEAETYALKAWGAQLSKELKENEEAVKVLSKFEDISGLANSYIELEKKQGSMHTIPGEKATQEELDAFYKRLGKPEAADKYSFDQKYEAEKRFAEAAFKANLSDKQAKELYDFFLNIGQSQQAQYKEIIVKKAQETDALLQKEYGNLFEQKIGNYTKALKLLGGGEVMKQLEETGLAYDPGFVKLMINAGEALGESKAVIGNGTTPNGIKSAREGGTFSFFNE
complement(1188358..1188624)       hypothetical protein; TDE_1151                                                       N/A                 TreponemadenticolaATCC35405MSKCVIPGYETSSPDEQIEALRKTFKRVFKTEDGKIIFNALLNDLFYFTEAKTEAEKALCEYAKFFLRERLGIIKTLNITNSLIDNLD
complement(1188617..1190299)       PHAGE_Entero_Tyrion_NC_031077: DNA topoisomerase II large subunit; TDE_1152; phage(gi100005)     6.48e-61            TreponemadenticolaATCC35405METKKDSKELLDDIKGLFDILKDKRSMHEAEWQDVCTYIGSNVFDWSENKEEIKRPKRHTGRPSEYLKKLVSGLMGYTISPNVTWLKLSLNNTEMLEYAGVKDWLEQSEKALYEEFNRNNLYSQVSLFISNAASFGHGVMLIDEKKENSIRFLTIAEPEIYIAENEYGDIDTVFRYFSMTVKNIIARFGEENVSEQIKNDAKDIKGKNKEIKILHAVLPRDDYDESKLDGKNMEFASYYIDMDNNTILEESGYYELPYSVFIWEKETSSAYGGSPAREAIPDMRLLNKVEEARLKLAQLVSEPPMNVPDSMRGFESVVPAGYNYYERPDMIMTPINIGANFPITLETIQDIESRLRDKFHVDFMLMLQAQTAQKTATEVIELQGEKSALLSSLIVNQNKALSEIVIRTLNIMYRQGRFPEPPNILNGSDAVLNVDFVGPLAQAQKRYHQTGGVQTSLAISQPIIQMNPEVLDYIDTDKLLKNVLDTNGFPQSAIREDDEVEKIRQQRAEAQMQAMQAQMQMQAQSNITNNFDKLNEPVKEGSPIQELSEQLTGGLGGDNE
complement(1190352..1190948)       PHAGE_Strept_phiARI0131_1_NC_031901: ssDNA binding protein; TDE_1153; phage(gi100044)     1.56e-35            TreponemadenticolaATCC35405MSKLFPDHIIFYIKENVKGKSTAELTELVNQVFATNYTEAQIRTCKHNRHIKSGLTGHFPKGHTPYNKGRKGYYSPGCEKGWFKKGNIPKNHRPVGSERIDTNGYVYIKIKEPNVWCLKHVRIYEKKHGSVPKGMIVTFKDGNKQNCSIENLLLMSRAEAAVMTHFKLRGNTPELMETGVLVSKIILQKSKLKKKQKK
complement(1190941..1191186)       PHAGE_Lactob_PLE2_NC_031036: late promoter transcription; TDE_1154; phage(gi100046)     2.61e-09            TreponemadenticolaATCC35405MKNKLTDLNNHLFEQIERLMDDEVMEKNADLEIKKADAVVKVAEAIIKNANLSLQAYKYADEWKTGNAKVPEMLRIGVGNE
complement(1191246..1191545)       PHAGE_Synech_S_CRM01_NC_015569: hypothetical protein; TDE_1155; phage(gi333798317)     2.28e-11            TreponemadenticolaATCC35405MSNETDTRNKINEIMEAMEDLLLYKNRLYGNSALNPKQIFYKGDAVNSILIRLDDKLGRIMANTDEKPRINDVADIIGYCTLLLISMGVDKADIDNLRD
complement(1191711..1192025)       hypothetical protein; TDE_1156                                                       N/A                 TreponemadenticolaATCC35405MALAEITEQEKEIPEGLILTGFVKMKPDVKSEAACVLDNFLESLDWNFSYYDDIATEPTERMKKAALRFVKEVLKDYEVSVYEQVCIKKINVKRWLKKNSDWYK
complement(1192130..1193383)       PHAGE_Arthro_Shade_NC_042015: hypothetical protein; TDE_1157; phage(gi100002)        4.03e-60            TreponemadenticolaATCC35405MDFLAGCNKHRENWRGILFRRTYKELEDIIVRAKELYIPMGAVYKKTDNIFNFPTGSFLRLRYLERDDDVSNYQGHQYTWIGFDELGNYSSDYCWRYMMSRCRSAKGIPCYMRGTGNPGGVGHGWLKKRFIDNQNPNTIYTDEDGNTRCFIPSRLDDNDYLIKNDKGYEKRLRLLPKYLYEALRKGNWDIIAGSAFEEFSRESHVIKPIALDPGVWFKFCSMDWGYSRPFSIGWWAVSRDGRMIRYRELYGCENGEANKGVRRSASSIAKEAYALSIAEGVNTMVADPAVWGKTDDGPTIADKFEVEGWKLIKADNDRINGKMQFHQLLKSKGEDGKPMLLVFDTCFDFIRTIPLLLPSTTRPEDIDTTLEDHIYDETRYAIMSEYARHPGRALEKQNGQWNFKNKRTRGASFDPYG
complement(1193503..1194114)       PHAGE_Bacill_phi4J1_NC_029008: terminase small subunit; TDE_1158; phage(gi971821634)     2.10e-07            TreponemadenticolaATCC35405MAKIAKAKDESKAKIKPKVEDWAEELNEQQRLFVLYYCTDEWCFLNGTLAYRKAYPKCKSDEAAATGASKLLRIAKVKKSARSLLKLTRELDDELTAYKILKTYEHLAFYNPADIITNTGELLKPLKELGPLAICVEQIQTFYTKDGAPCTVVKLANRHKALTVLMKYLSLVKPEINMEAMMPVAMISDKTSIAEWQTETKTS
complement(1194118..1194510)       hypothetical protein; TDE_1159                                                       N/A                 TreponemadenticolaATCC35405MIFFESLGLVEFFIEIEKYYGEYEENIRIVVFSFIKKLNDWERAALYNELIEHYSRGFSPPDVYRFNLHLKKAKEAAKRLKPSMVLSKKEENKEDIQKNLAEAAKEYGLDPNGKDLLKKMFACEIKKRKG
complement(1194507..1195931)       hypothetical protein; TDE_1160                                                       N/A                 TreponemadenticolaATCC35405MADGKTLTWRKFPRDTITNPALLFIAKKLPKERQHQVFTLFVALYCNADDDGVVDLSDLAVFSYTCIMSEDDLVDLLYRFLDRHIIEEITISGVPAYRIAGWLDPYPGRMTAAEKQAAYRSRIAEKKQPEKRSFLGSKGRQAPPAENPIDTPKPDVSDDTDAVYDEAGELSDDEILALFLRLEKEDEMEAPIKIVEPPESAAAETPKSVTERYPDVTGVTGEKNEVTAENCSVTQRYPTPLKTEETDRRDRERQTEGEEIETEEREMRDRETERETDRGEIDIEDTEQKKRKGRKRKDKTHTDRAENPARAPTGEILKEREAEEKETEEPPEREREPAPELAAVAEDTKKTKREAERRRACFKILWTFFNDKNPMGFVDEEAELLACAELAKMIVKLEDEKNTAEIIACQFTNSFNRLLNKGGYFENMPCTPIMLLKPGNYSKVFYSVSKILHPKDQGGMHWAAELKKVMDNEL
complement(1195910..1196131)       hypothetical protein; TDE_1161                                                       N/A                 TreponemadenticolaATCC35405MGEPFMITNLFIIISGARIFLLQKILELLPELVKARYKEFLQLYHSPILFTKRVTENTHYLKTRIYKWQTAKL
complement(1196146..1197774)       PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; TDE_1162; phage(gi100046)     6.56e-10            TreponemadenticolaATCC35405MAERKTILVSEVLPNLDRKMGGYGNIDTLAASIKEIGLINPITVRYESGDNEFPYTIIAGRRRLEAVKTLGLKEIEAVVYAEDELIPNEEIALAENVNRLDMHPVDEGANFKKLLKEGKTIDELSKTFDRSPSHIYQRIKLTELTDNMKEFFKKGSINISQAARIACLPTEVQENIYNAISKDTWFDGNADYAIRRYAKNRLDFPCTLCKNCTKRTRYTDNNLFPELNDRDDYCLDHECYEQEIVKHYREKIEKGVSNYSDLDFLFVNGIKEEFLMSLQKFFDFKIDLCSFMDYTQLDQRVDVCTLFDEVRKCIIPWYDVIDDKIKFVMKDEDYNKYFKTKREITDEEKLIIEALPDEYKEEAKKTADKQNLFNYSMERQAKTNTVCTLLKKEFLKPNPTFYLSDNFFDCIFRSSNKDFICDAFKIMTGANLTNLKDTKRFNFKHIDFLNLFFYAFILRILDSNIYEGLDTVIKLLGLDIKEAKKIFNEELKNLVIKDLKKAPDEESDDESEYELEETEDEDITDDSFRSEKNEDGEKVCYI
complement(1197790..1198020)       hypothetical protein; TDE_1163                                                       N/A                 TreponemadenticolaATCC35405MKTIYTVESELLSQRITITETDGKYEIDTEDGVHYSDKEVFLCCFADPRPKFPKRVHRIKKLFDGEVLGIEYLKDH
complement(1198023..1198256)       conserved domain protein; TDE_1164                                                   N/A                 TreponemadenticolaATCC35405MKTKSADVSSQWNEKRKTVLGLTLTFPSSEEKQKALEFLNSGGRKPAAFMLYLLDKEMERAGLKKMVVGKPADSYRL
complement(1198271..1198480)       hypothetical protein; TDE_1165                                                       N/A                 TreponemadenticolaATCC35405MKTGSNFYATMNEMLDNLNSNIIELKRAYESRNPIKTHTEKLYGLINRNINEARNLLKEDLSLELNKNF
complement(1198484..1198807)       hypothetical protein; TDE_1166                                                       N/A                 TreponemadenticolaATCC35405MKRQINYYRKQVDYKNIHTHGEIMEAVIFNTPELTYKYHIFILHNGKQTEKLYRRSLSGAKKSAYKQLQIPQKNGQAMLIEKAKPVFIRIDGRKVEVPEYMEIPIRG
complement(1198804..1199028)       hypothetical protein; TDE_1167                                                       N/A                 TreponemadenticolaATCC35405MKITKNTLIQINSSRHPTFNAIAVKDFDTNDEWYPVSLTDDYLEGMSKYWLKGEEVPCRKSLVRSFKIITEAKK
complement(1199039..1199572)       hypothetical protein; TDE_1168                                                       N/A                 TreponemadenticolaATCC35405MKFDVDLYKVKALEHCEDPKEEHILCGFYYEVAGVDFLDVGNEGFTERLECPINTYPIRPYTVCRNTGVKINGEYLYEFDLVIFGNDDRMGIIVWNEFVMSYVINPSNNYSSFLRLKGPDSHIKKIIGNYMLSDADSKKFQKYSDDLDAKYRGPEPTVECRSQQHINREIKRFLPKN
complement(1199569..1199814)       phage DNA-binding protein, excisionase family; TDE_1169                              N/A                 TreponemadenticolaATCC35405MIMNMKQVMELTGYTQSYIYNLVHKKMIPVYKPNGGRLFFVKEEIEQWLLGGRQMTSEEMHKEADKMLLDMAARRSKRRTK
1199940..1200302                   DNA-binding protein; TDE_1170                                                        N/A                 TreponemadenticolaATCC35405MAFRENVKKLMDKHGLIAKELALRAKISVNTLNMYLGYKESLPNVDIGVKIAKALDTTVEYLVTGIESSSGIVIAPEDIELIKKIHLLDDIDKKVVEDLIQSFIDRKRSEVSAMETSRIG
1200315..1201118                   conserved hypothetical protein; TDE_1171                                             N/A                 TreponemadenticolaATCC35405MKKIFFCLILFMIALLCFADKKFEKVKAAAEQGDAFAQFNLAAMYDKGDESLVDKKQAVYWYTKAAEQGYDVAQLFLAFMYDIGDGIPIDKKQAFYWYTKAAEQGNVAAQCILGLMYSNGDGTPVDKKQAFYWFKKAAEQGYAKAQFNLGGMYYKGNGILTDKKQAFYWFKKAAEQGYAEAQFNLALMYYNGDGILADKKQAFYWYTKSAEKGLAFAQFNLGLMYSNGDGILADKKQAAYWIKQAYENGYEPAKELWDADELWKYQD
1201146..1201340                   hypothetical protein; TDE_1172                                                       N/A                 TreponemadenticolaATCC35405MRYKMRYFLAVLLCIVLYFVIFGGLGVILDMPLYNLGAMFYLLNIGYIGLCVFLWKKITKKNDK
complement(1201347..1202411)       PHAGE_Flavob_23T_NC_041859: protector from prophage-induced early lysis; TDE_1173; phage(gi100001)     6.38e-12            TreponemadenticolaATCC35405MSVKLWINRNKIYLSIYISGKRWRESTGLTVTTDKAQNKVVMDMAEVLRSKREVSLIAVSNGLSDPALTKITVLEYVKNAAAEKNKKHPLHKVVLWIEKISPTLKMDALTPTWFENFQQTLQRETELSPYTCENYACSLRTLFKKAVRDGVLVKDPTIGVKHIHCPESIKEFLMPEDIRKLAAEPIGGILGADVKKAFLFACCTGLRISDLKSLKWGGVSFEKKTLTKIQQKTKRAVYLPIKDEAIAFLHLLAEENPNRTDEDFIFPHVATTGTNMNQYLIEWGKRAGVRQKIGWHLARHTHATLLLESGADLYTVQKLLGHTKISTTAQYTQVTDRKKKEAIDLLPDYGIVGD
1214754..1214769                   attR                                                                                 N/A                 AACTCCCGCATAGCCT
