gi|00000000|ref|AE017283.1|  Propionibacterium acnes KPA171202, complete genome. 2560265, gc%: 60.01%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1634400..1634414                   attL                                                                                 N/A                 GTGACGCCGACGGCA
1644242..1645189                   PHAGE_Gordon_Eyre_NC_031122: RecA-like recombination protein; PPA1522; phage(gi100035)     1.86e-22            CutibacteriumacnesKPA171202MKKPSPTRVGAGQLPMSLTVPVEDFCGHLSALRRSPNTIRGYRADLIDLMGHAHSHGDDTLGRIGTSQVRAWLADTRVAGASAATMQRRWSAARVFFRWAANEGLISADPTTALNSAKVPKRLPATLGVDQARHILDEAVAQARHDESPHGARDAAILEVLYGGGLRVGELCGLDLGDVDRSRRTVKVTGKGDKERTVPMGAPALRAIDTWLPRREEWVGPHSGQALFLGARGRRIDQRVVRRVVHTDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIYTHVSTERLRTAFRQAHPRA
complement(1645109..1645867)       PHAGE_Coryne_phi673_NC_042354: hypothetical protein; PPA1523; phage(gi100022)        2.26e-05            CutibacteriumacnesKPA171202MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWLPGSRGVEFAASVGEPVTTVTAGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQVVVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQLQVRLLPLDSRPHSASGHGWPVRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQSFGGNVGVDLRGG
1646015..1647097                   conserved protein; PPA1524                                                           N/A                 CutibacteriumacnesKPA171202MAVTPVLACYRTCDAAIGGITAWQVTTGPDGPRTNVVGSCPLGDASWVTPLYHLVVVLCERDGTLVVVHPGREFQVVGTVQLKGQWPCHGAVDPTGRLMAVADYASGQVEFVDLSDPTRPTVRNVLDLGQGCVFPRPVADRQEGPHAHQVTWLDRAHLAVTDLGADRINVVRWSEAGPEIIGSLKTPAGCGPRHLTLTEDGRKQILTVGGALSGTVSTWSRPTGHDMWAREWRFVQETASSRWSHTGSQERRSACTPASPSAIVTTPDGRHFVANRSVGSIGILGGRFGRINLIDEFDTTGANPRDITVTTQNGTRVWVALPEEGQIAIHLRDEDTGGWQVETTIDQPGAMRVIVGPTTG
1647164..1647766                   PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; PPA1525; phage(gi100217)     2.95e-09            CutibacteriumacnesKPA171202MRKHTPNDNPLWEDLFKGGSLRRVTRWGESVLHAQTRPVTEFDEDLTTLIRDMFATMNAADGVGLAATQVGVDLSLFVYACPDANNIVHHGAFCNPVVTLPEGHDRHLEAADEGCLSWPGGFQSMARPDLATCTGQDPWGNDITVTGTGFFARCLQHETDHCNGIVFGDRLSKRARRKLDEQHDSVAHLYPDDWPLTPKG
complement(1647773..1648582)       PHAGE_Rhodoc_Trina_NC_042040: replication and recombination DNA helicase; PPA1526; phage(gi100033)     4.27e-08            CutibacteriumacnesKPA171202MATFIDIDDPADPRLADYVNLRDVNLRKSLEAEHGLFIAEGAKVIRRACEAGYPPRSFLLAPRWIDGLRDLFDGLDVEVFVVSETLAEQVTGFHVHRGALASMCRQTRWSAADLMAARRLVVCEDIVDHTNVGAIIRCAAGIGWDGVLLAPRAADPLYRRAIKTSMGTVFQLPWARLEDWAGGLGELRDHGFTVAAMALSGDSVTLDEFSADLRQNPRKVALLMGTEGAGLSAHWISQADVVVRIPMAGGVDSLNVAAAAAVACYELRG
1648615..1649601                   transporter, sodium/bile acid symporter family; PPA1527                              N/A                 CutibacteriumacnesKPA171202MSSANPRRTLPIDGFVLAIVVTAIIGSMLPATGSAVPVVKHGVTVLIFILFFLYGARLEPRETLDGLKNWKLQGAILASTFVVFPLIGLAMRALVPWALPSTLYVGMLWICLVPSTVQSSINFTSIAHGNVAGAIVAATTSNLLGTFLTPLLALLLMSTSGGLTIQPSSFLDVIVQLLLPFVLGQLSRRWTADFVTEHRKSLKYVGQGSIILVVYSAFSEGMREHMWSLVSPASMVVLTLICLALLFFMLWLTWTGSGWLDFNRNDRIAIQFCGTKKSLATGLPMATVLFAGQPVGLIVLPLMIFHLAQLIACGMLAGRYAQQWEVEQ
complement(1649799..1650767)       PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; PPA1528; phage(gi15834404)      6.82e-05            CutibacteriumacnesKPA171202MSLIPPQGVITEDNLMVNIDSVIYFQIVDPERAAYEAQSYKTAIEQLTMTTLRNIIGGMDMEAALTSREEINQKLRSVLDEATGKWGIKVNRVELRAIEPPPTIRDAMEKGARAERDKRAAILLAEGQRQSQVLSAGGDRESAILRAQGDREAAVLRAQADRQAQMLRAEGEAQAITTVFNAIHAGQPDQGLLAYQYMQMLPTLARGDSNKVWVVPSELNDALKGIGSLAGKDEHEPGKGGFAAADPSQFAAPEKIDVFAEIEAQKAEEKEASEATVQQAIQEAAKLENPGLSGKRSMGGGQITPAPAEQQTISEQGSGQVE
complement(1651047..1651514)       conserved protein; PPA1529                                                           N/A                 CutibacteriumacnesKPA171202MLESFGEHRWLLWAVASAVLACTEMLSGEFTLLMLAAGAGAGAITAAIVPGMWLLQVIVAAVVAALLLTVLRPTLLRRVREAPGYRSALDKLVGSDGVATSDITDGHGQVKVDGEEWSARALEPGSTIAAGEKIEVYEIDGATLVVYPVFRSLSS
complement(1651541..1652326)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; PPA1530; phage(gi371496158)          5.79e-16            CutibacteriumacnesKPA171202MSAAAQLAGVGVRRGDRWILDNVNLDVLDDQRWVLVGPNGAGKTTLLQVLGAQLHPTVGLVEILDEILGAVDVFELRPRIGMACSVLAHRIPESEKVGNMVVSAAWAVVGRWREAYDEQDLARADALLERMGLGGMGDRMWGTLSEGERKRVEIARALMTDPELLLLDEPAAGLDLAGREQLIEVLSAIFTDPDAPASVLVTHHLEEIPAGITHALVMAEGRIVAAGPVETTLTSEVLSGAFGMPLMVSHIDGRWNARAAR
1653814..1653828                   attR                                                                                 N/A                 GTGACGCCGACGGCA

#### region 2 ####
complement(1718901..1719278)       PHAGE_Bacill_phi105_NC_004167: hypothetical protein; PPA1592; phage(gi22855043)      3.24e-21            CutibacteriumacnesKPA171202MPVKPARPCSQPGCPNLTHARFCEAHAKAEDERYRKWQRDPKINRRYGARWRKIRTAYITAHPLCEDCLAAGRYTPAQEVHHVIPLEHGGTHDQANLRSLCKPCHSRQSALDGDRWRQTPRIYTY
complement(1719434..1719895)       hypothetical phage-associated protein; PPA1593                                       N/A                 CutibacteriumacnesKPA171202MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLHAGEMRVAATLDRIDIYRARYAQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQTVCDHFYVERTSAYQKKSRALARLASALYGQAA
complement(1719886..1721262)       PHAGE_Staphy_phi7401PVL_NC_020199: helicase; PPA1594; phage(gi448244660)             1.79e-152           CutibacteriumacnesKPA171202MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLRVARDTWPAEVAKWDHLQGLSVAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGTPASNGLMDIWAQFRLLDGGQRLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLTVTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTVEVHGAKLDALEDIIEAANGQTVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIPLGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNARLYRQGQAEPVTITHLTATGTLDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM
complement(1721243..1721521)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; PPA1595; phage(gi212499740)     1.35e-17            CutibacteriumacnesKPA171202MNEHHIEAQLKKAVEASGGLCWKLVCPGTTGVPDRLCLMGGQVVFVEVKAPGKKPRPIQRRRMSQLAAHGFTALVVDSVDGIKKVLDALPAA
complement(1721656..1723914)       PHAGE_Lactob_A2_NC_004112: putative primase; PPA1596; phage(gi22296557)              1.46e-58            CutibacteriumacnesKPA171202MTPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDCVVMDIDNDHTDNPDEWITPDDLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISPVTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPETTIHNGTKLLDAWLDEADEIDVFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELESIWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDWLVYEGGVWSESAPAAQGIAQELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKALGGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREAHPMLLTTPARLDADPYLLNTPGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVGLAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAEAKGKRLIIAAESEEGVRLSTSTVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGAVLAWIMEGSRLIHAEDYQLTPPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMADFNATLEQSGFERRKSKHGMYVYGLALTSEFNS
complement(1723911..1724348)       PHAGE_Gordon_Gsput1_NC_030932: ribonucleotide reductase A subunit; PPA1597; phage(gi100062)     4.27e-08            CutibacteriumacnesKPA171202MIATIDVGIPLRNADGYPDPTCYQALKEIQLAEYGYRPLVYICSPYSGDIAANVELARRFCAFAVKARQIPLAPHLHYPQFMDDTDPDARELAMFFNRILLSKCEQLWAYIGRVSPGMRAEIDWAHQMDIPIRFFDADFQEVHPA
complement(1724348..1725109)       PHAGE_Staphy_37_NC_007055: ORF016; PPA1598; phage(gi66395745)                        2.75e-56            CutibacteriumacnesKPA171202MATGLQVFTNHEFGTIRTITSSGQILFCGKDVATALGYANTKDALARHCKGVVNHYPLETAGGVQQVRFISEGDLYRLIVTSKLPAAQKFETWVFDEVLPTIRRHGIYAIDELLADDEFLERAITTLRAERAKRLAAEQALLEAAPKVSYYDIVLASPSLITATEIAKDYGLSAKKLNQILREEQVQFHQSGRWFLYAKFAEQGYTQSKTHEYDEGKTRTHMYWTQKGRLFIYDLLKNTRGLLPVIEREGQGA
1725426..1726343                   PHAGE_Clostr_phiC2_NC_009231: putative abortive infection bacteriophage resistance protein ORF 37; PPA1599; phage(gi134287370)     1.74e-35            CutibacteriumacnesKPA171202MEQVKQFKTYGEQVELLRQRGMRVNDPQHAETLLARLNYYRLSGYWYPMRRFSQGDGTARDEFVEGASFDLVVALYGFDEQLRHSVFIELDRVELAIRTKLGHELGRLDPLIYLDPKRLSARARQRNKDGRSVHEVWLRKYQSALKASKEDFVAHHKSKYGGTLPIWAAVEIMDWGMLSYLYGMSPNIVRKRIAEPCGLTGPQLESWLKSLNILRNYAAHHARMFNRVYDIKPKLNNGVRLAPVAEGMNRVFGQLSLIQYLHRQLDLSPADRLPKLFHTYPHNPIVPFSRTGAPDNWRELPLWCV
complement(1728384..1728581)       hypothetical protein; PPA1602                                                        N/A                 CutibacteriumacnesKPA171202MSDCFNAITLAVWVYVLIPFWMVWGYYWIKDKRAKRRERQRIDELIAKEKAELDRMNATYNLDPK
complement(1728594..1729139)       PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; PPA1603; phage(gi100017)     2.70e-69            CutibacteriumacnesKPA171202MSTNNPTRVVTGEVRLSYAHVWEPNSIQGGKPKYSVSLIIPKADTTTITAIEKAIDAAIDAGTAKFGGKRSNKAALKLPLRDGDTERDDEAYANSFFVNANSLTPPQVVDENVSPILDRSEVYSGCYARVSLSFYAFNTNGNKGVACGLGNIQKIRDGEPLGAGRVSAESDFGAPADDFLN
complement(1729145..1730287)       PHAGE_Staphy_phi7401PVL_NC_020199: hypothetical protein; PPA1604; phage(gi448244653)     6.24e-92            CutibacteriumacnesKPA171202MPDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPTFKPESGWIDTEMEDLTDDYVAFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAFGDLYDITDVAVTIYQPRRGNVDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQHEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKYTEENAVAEAAEAAGYADIYDRRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTDKRPALEIHSVQTEFTKTESR
complement(1730280..1730855)       hypothetical phage-associated protein; PPA1605                                       N/A                 CutibacteriumacnesKPA171202MPTKLKIKIAKHPSPAAALAAKEIRPSRRMLRAIFGTSRPQHRMAVLLPGSEASTVEVRVADTDDDLMALADAAGVTMLAAAIEETAWEGFEDHAGMPGARPIAAAGLAQPDLEQAAAEYEAAHRQAPEPAPEPEPVSLAQVRGVLAGLSSQGMTEQVRELIVATGADKLSAVDPTKYGWLLAKAKELSDA
complement(1730957..1731550)       hypothetical phage-associated protein; PPA1606                                       N/A                 CutibacteriumacnesKPA171202MPVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEELRAQLRDPASRPKWARAYLDDVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFASDDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRFTEIAADKTGAGQPTSADAVRKAVSRGLAQLRKTLTES
1732056..1733057                   hypothetical phage-associated protein; PPA1607                                       N/A                 CutibacteriumacnesKPA171202MGSDGSRWRGGAVDYKSSFHAVLATVRPLMKGTRNLGEFTAGLIDMGLVPRGTVYGEKTALEMRKSATWKGYANGSDQLPTVLASELAGRWDQFRFASNVSQAYEESALNDLADRLHDLDESINKGNVTEGLGQLFYKVFTEAAGETAAVTEPLTLADKADRSGIPYIDEKTNRLRLGDRSVALPPKHPTPDTVQPAELGYVSALLAAHCEDKARTGVEVQLDDIPSRLVQHFQEQRKAFYRAEWVRETSWNCIHDGRPLFDEFLETMHAGVSDTNLRQYPNGLERLLATLAQAAAVQLDGVRLDQIIDLIDVWSRKGSCHELVARNRLGWVD
1733057..1733503                   hypothetical phage-associated protein; PPA1608                                       N/A                 CutibacteriumacnesKPA171202MRATSLDTSFEAELRGLILLFLLGDAADADYLGALDTITVNAHTFGVGAENLNGTHRLASGELHTRTVLMTQALQHLAIQGFVTLQPDRSPAAFTITAEGESVVNHFRSRYAGQLFDTALETIERVGDLSTSELAQIIRSATPEGETR
1733500..1735374                   conserved phage-associated protein; PPA1609                                          N/A                 CutibacteriumacnesKPA171202MTPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVLDENSGYTEVRMGVRTAQGSLTLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSSVWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADEDRISTKKPILLPLQTTAQPAFKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDPAEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYRARIERFDFVEEGHALTAHREPATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQTIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQALSTSLASHNAIIAMQAEREQHLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARFSRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDDPQLDPELQEARETIPAALYDYLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREGEGRYGFLLDAQDEDLIDLEETDDN
1735364..1735600                   PHAGE_Bacter_Lily_NC_028841: Xre-like protein; PPA1610; phage(gi971748289)           1.29e-16            CutibacteriumacnesKPA171202MTTNRAFSYKPLWKLLIDRDMNKIQLQERAGISPATLSKLGRGGNVTTDVLARICEALDCDIADICEVVPTDLKGETD
1735601..1737592                   PHAGE_Escher_Murica_NC_041871: tail sheath protein; PPA1611; phage(gi100423)         7.58e-27            CutibacteriumacnesKPA171202MTAQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLVLDDYVQGSQTPKSDEFAYSERADLEPQDDNLLILGESGDVLEALTRVPELAEKYVGKVKLIYIDPPFNTAQTFASYEDNLEHSIWLTMMRDRLHHMKKLLADDGSIWVHLDYAENHRMRLLLDEVFGCSNFIAEFVWQKADSPRGDAQRVSVDQDVILCYAASGSTVMNRMERTAADNARFSNPDGDSKGVWFSDNRSAPTNVMSWQHPSTFAIQHPISGEMIYPAKGGCWRFGRERLLESLNEYAEYASGDVDIAARVANTSLRSDQVRSDIPDLVLVDPASAAQCARTRIDDGNWPEFFVTATSFGRKSYPPNEGQPARSWWPNDQVGHNREAKSEIKALFSGATPFSTPKPERLLERIIHIGSNPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTFTRPRLEKVLNDQDPGGITRTKGERVDATEDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSIEVKTLKAASKTRRTKEVVNWRGGGGFQVAHLSPACFDYAPELDRVMLTAAATGQTLIESVTANLGFTLLHPDDDYIFDARRGNALLKVVEGVATTEIVDWLASQIQPGETIVLAATTVMDGVRQHLRKLVKGSRVVALPDDVFRYSEGGDQ
1737592..1740180                   PHAGE_Paenib_Vegas_NC_028767: DEAD/DEAH box helicase; PPA1612; phage(gi971741648)     3.16e-07            CutibacteriumacnesKPA171202MANRLNISFDSDMLESISAEFDLRAPNKEALRQLVFTLDGDYDPTVMQVLNLATGVGKTYLMAAFVEYLRRQGVGNVVIVTPGKTVQAKTVQNFTPGSSRYITGSALPPEVVTPQDYSAWIARQNGPVQLAFGRETPMLAFIFNIQQLIAPKSDEGDTLGGTQDAMRRKPRRFDENAGVLFDYLKGLDDLVVIADESHLYGSSAVAFNAALRELDPAAAIGLTASVDKKTDHVIYEYPLYRAIQDKYVKAPVLAFRKSGYGTDEASEEQQLRDALQLRAIKQAHYDAYAASENRAHVNAVVFVVCSDVEHATQVAELLRTPEYLGRDEAVLQVDSKHEDELTQRRLNELDLPGSPVLAVVSVNKLKEGWDVKNIAVVVTLRAMASEVLTQQTMGRGLRLPFGRYTGVWQIDQLDIIAHQSFTELLNAENVLQQFGLDEAIAEPDKAKVEEAIRKAAEESGTGTGTPTTGGDQPTTTTGSEPGTGVSGEVAGGVAPQPGTVPVGGSDSPGAGLPGIGVRTITEQEDQPTWELVSIGRNPSFADVSYRFPVTTMTVQQPPIDLSEISDAEIEQAARRVTSAGDVLLRKEIIAALGKKLRAEDRESAEVDSVHVDDADAEEALVKLVINMSLVPKTEQTARYVATFLVPKFMRTVTFTGWTVKSLDSARAELLALIKNYTTETLRATREVPTIHPKSMPGTGYTLPLGEKVHDQIESRDQFVRGRVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVYYNAKDRYFPDFVALDTNGVHWIIEGKDERGRDDARVQAKRKAAEALVRRLVAEDAYAGQHWGYLIAYEQDTARADSWEDLKAFASPVSNAL
