gi|00000000|ref|NC_000000|  Staphylococcus epidermidis NIH04008 HMPREF9972_contig00003, whole [asmbl_id: NC_000000].21799, gc%: 29.41%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1..149)                 PHAGE_Staphy_80_NC_030652: prohead core protein protease; HMPREF9972_00120; phage(gi100061)     6.02e-08            MFKVNYSVLSYYPDIYLRSNLAIGVAFEVVGESYHKNEVKFITQRKKIVS
complement(156..929)               PHAGE_Staphy_52A_NC_007062: ORF013; HMPREF9972_00125; phage(gi66396280)              1.72e-57            MEIISEITEDVGNGVTDPIRGYIDDKKVVAKYIHNNEGFIALFNELLGYNLAEFFGIRHPHFGYALFSKEDTAVKNGKDYVHSSLFTYTTWLEKSLTITSPSMTSFVQKSEIVNLLLFDIFIYNKDRNLGNLLIEIPKKLYPIDYTHILPGGCIWPDVLKNDDYSIEDIIKDMFSSGYYQYLLENRKIETSIIEDCGRTFVDKVNDVDIESIISKIPIYLKNNLSEENIQQLYKYFIYITENFDEAIKFIIEKIGKE
complement(1108..2025)             PHAGE_Staphy_IME_SA4_NC_029025: hypothetical protein; HMPREF9972_00130; phage(gi971766708)     1.62e-77            MSKEYLGEWNGVPVYTDFLPYGTRRTGQSLDTGSPIFAVYHDTGNPGSTAQQNVDYYKNTYDIDWATTASAHFFVDDKECIICVPLDEKAWHVIYDTPTDNYYFGDDANDAAFGGELCYFEDDRERSLKALDNFARVYAVLCPSWNIDHYNKAPGHQDIQDDKRDPGNALEACGYGRDEIDVIDNLVQRYIDSEDVDTETIVNQPEEQDEIIEKKPVGCTRVKVWSEDAYYKGKIKYDASLRERAGSSFDNFSFAKEIDVLEAGTEVYIFEEIQDPQGNIWCRTYSPSNNGWVHKHTIEVEEKYK
complement(2065..2460)             PHAGE_Staphy_SAP_2_NC_009875: holin; HMPREF9972_00135; phage(gi157738598)            7.95e-23            MGTVQNYNTEVDDFMSLIYSGNSVFIDLLLIMILIDIVTGILKAFSEGKLWSHKAITGYIKKIAYLCVVLVANTLDIVFQLDGILVNGSVIFLILSEATSIIENAAILGVPIPDQITKRLNIFSKDNNATK
complement(2484..3761)             PHAGE_Staphy_187_NC_007047: ORF006; HMPREF9972_00140; phage(gi66395221)              1.88e-150           MANQELSFDITKLGNQQEKQQYIVSRVGDGGLKAITISVTSNGTPYNITDLTPIFEGVKPDGERIIDTTGGIVLNAKGGIFRYILPQQASTAEGDYQQAFFKLKRGEQTDSTIEVQMRVLKNKVEFGINSESYFTEYQKELERLRKTVEAGIKEINNSADGTKNKVQNLVDTANMLDLQIKSLKSSIGSNQLVTKSELNNQINQLTEQVSDFSSSLITTKQNLTQNIRDLVSKKLDAGVREGVLDNPANITSTGYYYFDSTTQGMPVRNGNNTTGIIQAIMQDDGNGILTILGSGLSIEKYRGQLYDRWKSSLPILLWKGRGQRGNTLELKDKIQNYGQLIIKLVFFTNRLATQFITVPDIGQTVYLNNIGMRALNDEFKNGYLDEISLSVKDERHIQILKTLTSTDNAIATNSDAIITAIYGIY
complement(3779..4795)             PHAGE_Staphy_187_NC_007047: ORF008; HMPREF9972_00145; phage(gi66395223)              1.06e-117           MNLNKSLIDSDGVTFRRQMIENLKIIEDTFNKVFGYKDLSTQERKELSEFKNALEKEIRAIVMPEMSPLEVTEEVSKSKIDLTGVKHETLSQRIDADINNIIKKDKYSNLVVTQNGTLVYDYSKLSQTIKQVRNIYCIGDSVARGLHAKKNYGQYLSEKLNIPVNNFAVSGATFSTASNNNIYKQANQIQNADLVIIQGTDDDWLYGNGVKIGKDKTDISTFYGAFYQIIKLIRLQNKGVKIICMTATRQLPVNGNQIRRKDTDKNSLGLTLEDYVNAQILACTELKIPVFDAYHSNIIDSYNPAFRNKCMVDGLHPNELVHEVITYELLKNYYYFYG
complement(4808..5404)             PHAGE_Staphy_187_NC_007047: ORF019; HMPREF9972_00150; phage(gi66395234)              6.33e-77            MTQITKARTLTYDGEEVYVRTHIDVIDGFDKNLLLTPEEKQKLNSFSQDNLTVATSEKAGLMSAEDKKRLDKLKTNSNEYSTRLSNVSTNNTLIKQDINLWPSNQQTVNLNKSISSCNNGIILVWRLDESDDLYHYQYLPKSHVQLHRNAKVTEVISINSSGQTCTKTVVVSDQLIKGTDDNFRNNANKIRLHEILEY
complement(5388..5609)             PHAGE_Staphy_187_NC_007047: ORF004; HMPREF9972_00155; phage(gi66395219)              1.12e-09            MTKIKLKELYESGLSFYPITHVKAIRGLSIATETEDGLMSKKDKIKLNNFNSTGPNRLGSVFYKEVNNYDSNY
complement(5596..6774)             PHAGE_Staphy_vB_SauS_phi2_NC_028862: endopeptidase tail family protein; HMPREF9972_00160; phage(gi971750148)     3.61e-46            MDYIVIGNMNETKKEIFIDIDYGSFKYDYEKNNNRSLRFTVIKTNRNKDIYDLIQCESIVYYQGQKYIIKAPTFNNKSKIQTVDVTAIHIMYGFQDHYVYSNSKKENDKNTKSYTLEEILKYGFKDNTLGYEYEIIGRFKTTKLDELGNAPGFDFCKAIAEKFNAIIFADNKKITFYSEKEFYKKRNLVIRYKYNTDEIAVDVNTNNLKTEIKAYGKKQDSSAKSDDRKSKGKDQSIEYLYKSPNINKWGRKVAPPINNDEISDLEELKKWVKTQIQDEPETSLKLVYKDKEPLSENDIIKFIHQSMGFNVDLKIVSLSKNHPFVNRPDEVTFSNEKKDIINLQNSIQKRIYKINAYTKKAISDTEKRLETIKTNTPIFTAKDVGSVVDDEN
complement(6787..7611)             PHAGE_Staphy_6ec_NC_024355: minor tail protein; HMPREF9972_00165; phage(gi658310352)     6.00e-57            MNDWFKFIFKETIINLNNIPGVIFKDIEIGDVNVDNTSQKIDANDGVIPGSNTFSPFTLKATFYYDGVDESDLFLMEQKLRNVIYQREPYYISHSKLPRVKYAVNDASLKKTRYFHSDMEFEIEFTVYKGYSESLLYTNEVDSLEDGFMLTETLPTDYVPRYQFNTNNFTVYNGSSEVIDPIKRHTLKIKIIADSPSNFYLTNLNNQSKFTYTKPLKTADTLILDGEAPFLNDKRCGVDTDNGIIKLEKGTNNFKVNGNAKIQSIEFAFPFIYR

#### region 2 ####
complement(12271..12621)           PHAGE_Entero_IME_EFm5_NC_028826: putative tail tape measure chaperone protein; HMPREF9972_00185; phage(gi971746938)     9.56e-05            MTNIKGTYIELYNSEKGEYEKIIQPFISSKKLYDALDMQEKAQKAKTEKEELDLALHYIEQLFDSPKVTFESILNGVASADLSETLQRIMSDVVGKKPQNRQERLNQKHIKKQNKN
complement(12645..13304)           PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail protein; HMPREF9972_00190; phage(gi557308065)     5.79e-36            MTETVKTSSTLIGFEKVYVGIYNNNGDLQEILEWKDDHGGTVNMKIAGLDADELRVRASNKFVWISKKGTGDVKVEFETFNPPYEDMMTILGRTKDQHNIHWAGEDTNPPYVSLLAVSSNLVGEKAYLGLPKGKLGVNDTEFATTEAKQKEPKNTKLSGTFVDKVIEGKSRVFGSCFGEDKFDKFKELIIGTVDSKSSKAVGSSLSSTSSSTGSQSVSR
complement(13316..13705)           PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; HMPREF9972_00195; phage(gi557308064)     3.68e-21            MISDIFEYIEKVLNSNAIVNEHVGNRIFFYQVEETDEESINLPFIVINSLDPYSPRSFASNNYFNQNFVVQIDVESKEDSITKLVANEITKELFKHYLFKLDGGLDEFFIETQRFVDSRRYEGIPKNIN
complement(13702..14115)           PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; HMPREF9972_00200; phage(gi557308063)     5.29e-21            MSVKIKGIEGVTDKVHQEIQNLISKTETECLLKGAEVVKTAIIKEFGKFKDTGASINEIKISKPIKFNNKSKVTLYWDGPNKRYKIIHLNEYGYTKHGKKKASKIKPRGFGAIQRALLLSRNNYKDAVSNGFRSNIK
complement(14115..14411)           PHAGE_Staphy_phiBU01_NC_026016: head-tail adaptor; HMPREF9972_00205; phage(gi744692788)     6.35e-13            MSRVGGKPGKEYSEDTLFNCWASIENVWLKDIQQAKANNTETDLTITIRDPLNTFEIKKTHAVKILNGRFKDKIYDISLIQKDFQDSRFVTLICKQVI
complement(14464..14802)           PHAGE_Clostr_phiCT19406C_NC_029006: head-tail connector; HMPREF9972_00210; phage(gi971821548)     4.62e-09            MITENLAVSLEEMKKYLLIDFDDQDNEIKDLIYAAQSELATSGVPFPKVVNPLYNLAVKMLVSNFYEDRNSLGTRGYKVDAIITKLAMNQHQDFINYEVVSSSNNQNKEVAK
complement(14812..15099)           hypothetical protein; HMPREF9972_00215                                               N/A                 MTEKIIALCSEDFKDKSNNLTLVSKGDLYVGTVERIQFLVDRGVCEYIDNSQLDVMLLSKYAKHTGGPNFITSDGKKFIGKAKTLDYIKENILYK
complement(15113..16363)           PHAGE_Clostr_phiCD506_NC_028838: Phage capsid family protein; HMPREF9972_00220; phage(gi971819913)     3.68e-71            MNKRLKEILERKQELRKLIEQDDNADLNAISTELDEIEAEERQIKDKQNIIERMSKGETIGNVISQNFDKKEIDMRSMNWEQAIETPEYRSAWLNDIAGRKVTEEQRNLISKVNEQYRSDFVHSTENKGVLIPKSVADGIWEKAEQTSSLWADVNKFKVKGILTLVTGEKNKNATWYEESTVVESEELKFGTVELSGYELAKSITVSWKLKTMAINELETYIINELGKRIGAALSYGVYRGKGPKTAQTNSKSEPLGIRTILKNTNKYYDNAVLSYNVLCQYLGEIPTNYSKNTKIYASRRTIWTSLATLTESGGKPLFIADPTNNGIHRLFGIEVKEDAGIKYGEILIGNLKDGYVANIQEDISIYTEDHIKERKTDYMSYAIVDGKPIDENAFVILKVIDGVDLDEPENTVQAL
complement(16356..17000)           PHAGE_Staphy_phiRS7_NC_022914: prohead protease; HMPREF9972_00225; phage(gi560185962)     2.41e-27            MGTKRKEIIKREKQIRSMPVSISKRNEDEKEKMVVEGYAVRFNEPTVLFKFDGLEYKEIIKPEALNHADLSDVPFKYNHSDNVMIMARTRSKTLTLNIDSEGLFIRAELANTTAGRDLYELIKRGDVDRMSFAFTIEDEDYDIETHTYTIRSIDKLFDVAAVDFPAYDNTSISARKSSALELERSREIDLEKSADEKRKKELLLKLRLGGVFNE
complement(16990..18216)           PHAGE_Lactob_iA2_NC_028830: portal protein; HMPREF9972_00230; phage(gi971747631)     9.27e-67            MFNRAKAFWNKLFLDPLADAREQSIFKMMNNYTPTFNYVENPYDTKIVRKAVHTIATNGAKLRAKHIRKKDGKLEVQSTNFEYLLNIRPNYFMSAFDFLYKIITQLLLKNNAFVYIERDERGNIKGYHPINSRYTELIEYKEDLFIRFYFPNGNKLSASYDDVIHLRRYFNNNDIYGESNKCIINGLNVIQAADDSIINATKQSAFLRGLLKYNQILKPEDIKSHRNNFVKDYLNINDSSGIAALDQKADYIELKNDPKMVDSNQMKFLSEDMLAYFGTNEDIVSSNYTEDQWNAFYESVLEPISIQMSQEFTYKSFTEREMGHGNEIMFEPNRIQYASIKTKIELIKTMGPMAVIKKDEMREIFNLPSMDEGGNDYVQTLNYIVASDAQEYQIGKKNNDKGVDENGD
complement(18231..19946)           PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; HMPREF9972_00235; phage(gi100002)     0.0                 MVNKVEDYYFKSYPIQYNPIIEYFNQIKNKKVIVSLKIYKVYKKIVENIHDTESQWIYSPEHALHPIEFIESFCKHIKGKYAGTPIELELWQKAGIATIFGFINKKTKERKYQEIFWVVARKNGKSTISSGIALYLLGADGEGGPEVYTVATKKDQAKIVWNDAKKMVNKSPLLKLDFVTKVAEILTPFNDGQLIPLGRDSDTTDGLNVHGAIMDEVHAWKTMQMYDVVFDGISARDNPLILAITTAGTIRNSVYDIKYEESENIINGLWEDEGYKNERFLPLIYELDSREEWIDESCWLKANPGLGSIKKIDAIKTKVNRAKKNALLRANLLTKDFNIRSNANEAWLSFEDLNNTNKFELSELNPSYAIGGSDLSSSIDLTAACIAFMLPNDKNVYFKHMYWIPEDLVEDKVNEDKVPYDKWIELGYVRTTPGNKVHYKFVEEWFDELRDEFDIYIPWHGYDAWSAEYYVESMKDKHGSESMIKVYQGKKTLSGPMENLGADLKKKHINYNNNPVTKWCLSNTIVDIDKNGNIQPDKSNKRRRIDGLACMLNAYVILNEKMDDYINLIGA
complement(19939..20340)           PHAGE_Paenib_PG1_NC_021558: hypothetical protein; HMPREF9972_00240; phage(gi514231254)     2.88e-38            MVKIGEDNMDLIKQKRIKKELSKLKKVYKDIPKDKMIIVDGLINRAAFMRISLEDMELDIHKDGFVEMFSQSETQTPYERERPVARLYNSMNKNYQSIIKELTSHLKYLDEDHDEVQNNSVIEAFAKRRDRSG
complement(20461..20817)           PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; HMPREF9972_00245; phage(gi557308117)     1.10e-27            MSKRKQQQFDWFYRKKAWLNIREIALDRDNYLCRRCVRLSKVRPNPAVIVHHIIPITKDFTKALKLDNLESLCLECHNKVHPEKGKNRLSKDGFFVGNVRKEMMFDEYGNLIERVPPG
