gi|00000000|ref|NC_000000|  Staphylococcus epidermidis NIH051668 HMPREF1386_contig00012, whole [asmbl_id: NC_000000].202652, gc%: 32.60%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(84163..84366)           PHAGE_Entero_IME_EFm1_NC_024356: hypothetical protein; HMPREF1386_02976; phage(gi658310488)     1.05e-13            MEVNKVIYILLAVFLGSFGIHKFYAGKPIQGLLHILFCWTAIPHVLAIISAVLTLFKPADANGNVRM
84588..85076                       PHAGE_Cyanop_P_RSM6_NC_020855: peptide deformylase; HMPREF1386_02981; phage(gi472341616)     1.37e-15            MTVKKLVKSTHPILNKTIQPVSTYDQKLKVLLEDLEDTLYHEEAAAISAPQIGVDQSVALIDMEQEGLLQLINPVVKSQSQETVSDLEGSISLPHIYGEVKRSKMITVQSYDINGNAVELTAYDDIARMILHMIDHLNGIQFTKRAHHILNETEVEAYFDNE
85069..86001                       PHAGE_Synech_S_SKS1_NC_020851: cyanobacterial phosphoribosylglycinamide formyltransferase; HMPREF1386_02986; phage(gi472340960)     4.73e-14            MSKIIFMGTPDFSTKILEMLIAEHEVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQIPVYQPEKLKDSQELESLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIIDNTNDSIPQDDALATFASNIRREDERVDWNMSAQAIHNHIRGLSPWPVAYTTMNEKNLKLFSAFIVKGKKGNPGTIIETTKHELIIATGSDDAIALTEIQPAGKKRMKVTDYLSGVQESLVGKVLL
85998..87305                       ribosomal RNA small subunit methyltransferase B; HMPREF1386_02991                    N/A                 MMKSVRTYALETINDVLNKGAYSNLKINEVLSTNNINTVDKNLFTELVYGTIKRKYTLDYLLKPFIKTKIKSWVRQLLWMSLYQYLYLDKIPNHAIIHEAVDIAKKRGGFHTGNIVNGILRTVMRTELPSFEDIDDTKKRIAIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYHVKKDDMLPFCLHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVLDACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEVYDKMYDKILVDAPCSGLGVLRHKPEIKYSQSQNSIKSLVELQLQILENVKDNIKPGGTIVYSTCTIEQMENENVIYTFLKRHKDFEFEPFQNPATGEQVKTLQILPQDFNSDGFFISKIKRKES
87308..88402                       PHAGE_Pseudo_201phi2_1_NC_010821: Fe-S-cluster redox domain-containing protein; HMPREF1386_02996; phage(gi189490583)     1.11e-05            MITAEKKKRNKFLPNFEKQSIYSLRYDEMQQWLIDHGQQKFRAKQIFEWLYQKRVNTIDEMTNLSKELRQILKDHFAMTTLTTVVKQESKDGTIKFLFELQDGYTIETVLMRHEYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDETNERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFAEEDIQINFAVSLHGAKDEIRSRLMPINRAYNVDKLMEAIRYYQEKTNRRVTFEYGLFGGVNDQLEHARDLAHLIKNLNCHVNLIPVNHVPERNYVKTPKDDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQVETR
88409..89152                       PHAGE_Cronob_phiES15_NC_018454: putative serine/threonine phosphatase; HMPREF1386_03001; phage(gi401817585)     3.68e-05            MLNAQFFTDTGQHREKNEDAGGIFYNQTQQQMLVLCDGMGGHQAGEIASQFVTYELQKRFEEENLIEINRAESWLRSNIKEINFQLYNYAQENEDYRGMGTTLVCAIIYDKQVVVANVGDSRAYVINQRQMDQITSDHSFVNHLVMTGQITKDEAFHHPQRNIITKVMGTDKRVSPDLFIKRTHFYDYLLLNSDGLTDYVRDYEIQELLSSNNSLDVHGNELLDLALAHDSKDNVSFILLKLEGDKV
89149..91152                       PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; HMPREF1386_03006; phage(gi371496162)     1.25e-19            MIGKVINERYTITDKLGGGGMSIVYLAVDSILNRKVAIKAISIPPSEKEETFKRFEREVHNSSQLSHENIVSMIDVDEEDDCFYIVMEYIEGPTLAEYIHSHGPLSVETAIQFTEQILSGIKHAHDMRIVHRDIKPQNILIDKNKKLQIFDFGIAKALSETSLTQTNHVLGTVQYLSPEQAKGEATDESTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSIPNITTDKRDDVPQSLSNVVLRATEKDKYHRYHTVQEMCDDLTSALHENRLNEEKYELDKTKTVPLTKDDLNHKIYDEQNQNDLNKTMQIPIVNDSIKQQEFQSSEPRYYQKSDKKRSKMKIAILSIIFVILLIGLFSFVAMAVFGNKYEEMPDLKGKTEKQAEKVLDSHHLKVGDISRNYSDKYPENQIIKTNPDSGERVEQGNRVDIVLSKGPEKVKMPNVLGMSKNDALKKLKAIGFKDIHVEQAYSQTYEKGLISEQSVVANSEVAVNNHHITIYESLGVRQVYVNNYENKSYESAKKELEDKGFKVQVTKENNDDVEKGNVISQSPKDKTVDEGSTILLVVSKGEKSEEDDDEEDKDTTTKNETVKVPYTGKKSKSQKVEVFIRDIENKGDSAVQTFNIKSDKTINIPLKIKKGSDAGYTIRVDNKIVADKDVSYDG

#### region 2 ####
186817..186829                     attL                                                                                 N/A                 AACACCAGAATGG
complement(196202..197326)         PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; HMPREF1386_03451; phage(gi971821285)     8.52e-48            MASFEKRGNKWRFKVHFKDHNGDKKYITKSGYRTKTEAKKAAIEIESKLNKGYKEEKSYTLTSWLEYYLNTWRKNKISDSSFEIEQFSKKRILDFYNDINIKDITPSMHQSFINHLIEKGYSKSTLSKTHNLLKRSLERAKYDRLIYFNPCEGITLNHKDLKIKDKAKYLPKDKVKPFLAMVKKRDVYQYFLFRTLIETGMRIGEASALCWKDYDRKLKTISITKSYNQKRNKFGPTKNKENRIIFISNELANELFKLKTLQNGNKIANSDFYNNSYDYIFCNEFGEPLPRSTTHNTMMYVTKKLLGKGNELSIHKLRHTHATLLLESNVPMKVIQERLGHKSEAITSEVYSHVTKKMNDNAKENFEKYIKNVF
complement(197369..197740)         hypothetical protein; HMPREF1386_03456                                               N/A                 MHNCKEMINKIEVKYIDCPEKLNGFICGNNLYISKSIIPDLTVNEKVVSYSTRQINKLNSLAISSVSEFIPLDQLIEAIKNPQLNSYSKLAIYFNTTSIYIKQTLTFYKIKYPNLNLINAIDN
complement(197910..198260)         PHAGE_Staphy_JS01_NC_021773: repressor-like protein; HMPREF1386_03461; phage(gi526003583)     2.86e-28            MNCFKNRLREAIDSKKYSQSELSRLTGIGRNSISDYLNGKYEAKQDKIYILAKVLDVSEAWLLGYDVNPERLSDDDKRLSHNGEIIAAHIDDDVTDEEMKQIINFINFIKDNKSDK
198425..198661                     PHAGE_Staphy_JS01_NC_021773: hypothetical protein; HMPREF1386_03466; phage(gi526003554)     1.48e-41            MSYTFDYSLLCERMSEYRHSQSSLANAIPISRTSINHKLKGKNSFTQWEIKRICELLEISPNKVGLYFFNQNVRKTEQ
198689..198967                     hypothetical protein; HMPREF1386_03471                                               N/A                 MSNIAIEIKDDFINELVQSKVESILENYKRQYASIDIKDLVTITGLSKSTLQNKIVCEPEIVEVTRRLGTRVLYLYPQVLDAYQTVINRLGS
complement(199297..199500)         PHAGE_Staphy_CNPx_NC_031241: hypothetical protein; HMPREF1386_03476; phage(gi100041)     1.08e-07            MSKITKNELNQLFKERNTLIKQKFNEYHANRKDNSQNTMINIYLKSLVESQDEMFIQLLEKLDMLEK
199566..199775                     PHAGE_Staphy_Ipla5_NC_018281: hypothetical protein; HMPREF1386_03481; phage(gi399528932)     3.29e-28            MEYIGFADVGKFVQISGISKDDFEKKIAPNKEFQANCMYRFGKGNKRYIKITKAIDFIENNLMVKESDI
199790..199981                     PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; HMPREF1386_03486; phage(gi971746510)     4.91e-08            MDKIFLSFVIANLVFITMSIALQILGFYFTTAIGSAALLAMVTFIYLDKYFFQEIKKLTANGN
200044..200310                     PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; HMPREF1386_03491; phage(gi971746509)     2.83e-23            MKNESKQKMFDLYYALFSEFKETSQTCLLEIEKTSRNEIIINFLHYHNRYMTNNKLLQIFEIYPESHERLKNHIISVMRGQVLISKGA
200324..200719                     PHAGE_Staphy_92_NC_007064: ORF033; HMPREF1386_03496; phage(gi66396439)               1.26e-43            MNVTVLIGRLTRNPELKHTPNGIAVAYLNIAVNRDYTNSKGEYEADFINCIAFRNQAEHVTNYLSKGSKVSIRGRIQTRNYKTSDDKKIYVTEVVADKIEFLETKNKDTSNNNPFVNVNQNTQSNDDIFPF
200749..201651                     PHAGE_Staphy_JS01_NC_021773: regulatory protein; HMPREF1386_03501; phage(gi526003589)     3.03e-71            MTGWIKLHRQIMEHWIWEDSKRFKWWMEILLLTNHTDKKVFVGGKIQMIKRGSFHTSEVKLSERWNVSRNTVRKFLKLLQNDNMITTKKTGNGTTIEVHNYDVYQGNNEVKKHENEQQNKQETEHQHEHVRDNEQNTTKNVKKEKNYKNVKNEKKEKNHSAFDFFQNNGFGFITQYTAEDINYYLDSFENDSDEIVIAALKLAKDRNKVSWGYTKGILNTWLQTNLNSIDQVKFFELQLKEMRKNRNTSNQFQKKELTPEWLENRQYKKPNILKSNIIENDENFNKEVAAFKDKLNKKWD
201519..201531                     attR                                                                                 N/A                 AACACCAGAATGG
201657..202004                     PHAGE_Staphy_phi5967PVL_NC_019921: phi PVL orf 50 family protein; HMPREF1386_03506; phage(gi431810262)     5.99e-09            MTEIRKILTYNNMKIKFTDDELAKMNELNITEATIISRLKKGWPKFYIVHQPKKMSSEEFKEMLLVRQLADENRRCREAYKLQKLIEIKKKKLHLKMYPQKVRASKYYKTFLNLL
202055..202315                     hypothetical protein; HMPREF1386_03511                                               N/A                 MNNLLIPILFIVMCITYYLVPFILNKLIRIMLGLVMCISLSASVTLAFIYSYEEYIIPMIIGIILIEIIDIKTDKYDINDKVRIIV
202393..202652                     PHAGE_Staphy_SPbeta_like_NC_029119: transposase mutator family; HMPREF1386_03516; phage(gi985761243)     1.34e-55            MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDG
