gi|392840987|ref|AKVX01000001.1| Escherichia coli str. K-12 substr. MG1655 chromosome, whole genome [asmbl_id: NC_000000].4638970, gc%: 50.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
563979..564025                     attL                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT
complement(564039..565202)         PHAGE_Salmon_epsilon34_NC_011976: Tyrosine integrase; PP_00528; phage(gi221328640)     0.0                 MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEK
complement(565322..565519)         PHAGE_Entero_YYZ_2008_NC_011356: putative exonuclease; PP_00529; phage(gi209427739)     1e-33               MWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
565699..565911                     PHAGE_Stx2_converting_I_NC_003525: P protein; PP_00530; phage(gi20065922)            4e-32               MRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
566066..566365                     PROPHAGE_Escher_MG1655: IS3 transposase A; PP_00531; phage(gi226524700)              5e-49               MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEI
566362..567228                     PROPHAGE_Escher_MG1655: IS3 transposase B; PP_00532; phage(gi16128284)               3e-173              MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLT
567539..567871                     PHAGE_Acinet_Acj61_NC_014661: putative quaternary ammonium compound-resistance protein qacE; PP_00533; phage(gi311992758)     1e-10               MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVL
567919..568068                     hypothetical protein NRG857_05587 [Escherichia coli O83:H1 str. NRG 857C] gi|387616458|ref|YP_006119480.1|;  PP_00534     4e-14               MSLVLCFLLMSLFFMYSFVLSRLWRKKIAIRLLLYIQDNVTLIVFLNKK
568126..569652                     PHAGE_Bacill_WBeta_NC_007734: putative site-specific recombinase; PP_00535; phage(gi85701406)     7e-09               MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI
complement(570379..570501)         hypothetical protein CE10_0514 [Escherichia coli O7:K1 str. CE10] gi|386622911|ref|YP_006142639.1|;  PP_00536     3e-16               MRHQTQHSQNHFGLEQHQSAVLFHHVSLHQRANMLLLLEY
570723..571475                     AraC family transcriptional regulator [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253774468|ref|YP_003037299.1|;  PP_00537     8e-143              MHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPI
571690..572145                     PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; PP_00538; phage(gi401817579)     2e-60               VNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFA
572308..572598                     PHAGE_Entero_mEp237_NC_019704: hypothetical protein; PP_00539; phage(gi435439317)     1e-48               MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDA
572595..572957                     PHAGE_Entero_mEp237_NC_019704: Holliday junction resolvase RusA; PP_00540; phage(gi435439318)     2e-61               VNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRD
572954..573094                     PHAGE_Entero_mEp237_NC_019704: hypothetical protein; PP_00541; phage(gi435439319)     2e-10               MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV
573180..573563                     PHAGE_Entero_YYZ_2008_NC_011356: antitermination protein Q; PP_00542; phage(gi209427762)     7e-56               MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDL
complement(573961..574941)         PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; PP_00543; phage(gi16131377)     0.0                 MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWY
complement(574982..576049)         outer membrane porin protein [Escherichia coli ETEC H10407] gi|387611282|ref|YP_006114398.1|;  PP_00544     0.0                 MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQIN
576622..576837                     PHAGE_Stx2_converting_II_NC_004914: holin; PP_00545; phage(gi302393164)              6e-28               MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARG
576837..577334                     PHAGE_Entero_cdtI_NC_009514: lysin; PP_00546; phage(gi148609440)                     4e-92               MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAE
577331..577792                     PHAGE_Entero_HK630_NC_019723: cell lysis protein Rz; PP_00547; phage(gi428782852)     6e-79               VSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTK
complement(577824..578117)         PHAGE_Escher_TL_2011c_NC_019442: Bor protein precursor; PP_00548; phage(gi418487071)     3e-49               MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQ
complement(578408..578818)         PHAGE_Entero_HK630_NC_019723: hypothetical protein; PP_00549; phage(gi428782855)     9e-75               MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRN
579104..579310                     PHAGE_Entero_HK630_NC_019723: hypothetical protein; PP_00550; phage(gi428782856)     2e-32               MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD
complement(579475..579609)         PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein YYZ_gp48; PP_00551; phage(gi209427772)     2e-08               MIEQINIALEQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE
580058..580603                     PHAGE_Entero_HK630_NC_019723: terminase small subunit nu1; PP_00552; phage(gi428782788)     2e-96               MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELL
580578..581321                     PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; PP_00553; phage(gi428782810)     1e-74               VNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIR
582099..582284                     PHAGE_Entero_HK630_NC_019723: tail fiber assembly protein; PP_00554; phage(gi428782810)     5e-06               MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEA
585281..585327                     attR                                                                                 N/A                 CTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATT

#### region 2 ####
1198045..1198058                   attL                                                                                 N/A                 ATTCATCTTATTTT
complement(1199084..1200091)       PHAGE_Entero_mEp235_NC_019708: integrase; PP_01129; phage(gi428781836)               2e-54               LGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYK
complement(1200192..1200323)       excisionase [Escherichia coli str. K-12 substr. W3110] gi|388477221|ref|YP_489409.1|;  PP_01130     6e-16               MKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
complement(1201664..1201924)       PHAGE_Shigel_SfIV_NC_022749: repressor / cI; PP_01132; phage(gi557307563)            2e-47               MIDEYRPGDMIFVDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSII
1201995..1202135                   hypothetical; PP_01131                                                               N/A                 VLKSTSEYPTSFHAPACTHDMTGTNVICLLVIETSGFFVMFVVWCS
1202429..1202629                   PHAGE_Shigel_SfIV_NC_022749: Cro; PP_01133; phage(gi557307564)                       9e-32               MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD
1202673..1203230                   PHAGE_Shigel_SfIV_NC_022749: DNA binding transcriptional regulator; PP_01134; phage(gi557307565)     4e-97               VGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGT
1203406..1203585                   hypothetical protein APECO78_04710 [Escherichia coli APEC O78] gi|443616267|ref|YP_007380123.1|;  PP_01135     2e-29               LRQVNRWFKDHYGVPVRVIRWEPETQRVIYLREGYEHECFSPLEQFRRKFREIEVGHEH
1203575..1204942                   PHAGE_Shigel_SfIV_NC_022749: large terminase subunit; PP_01136; phage(gi557307528)     0.0                 MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWL
1204954..1205136                   PHAGE_Shigel_SfII_NC_021857: putative integral membrane protein; PP_01137; phage(gi526244693)     2e-29               MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK
1205136..1205609                   PHAGE_Shigel_SfIV_NC_022749: portal protein; PP_01138; phage(gi557307529)            9e-75               VFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLN
1205578..1206327                   PHAGE_Shigel_SfIV_NC_022749: baseplate protein; PP_01139; phage(gi557307544)         5e-137              VTAGSVIQRDDLVQYTTTDDATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGG
1206318..1206902                   PHAGE_Shigel_SfIV_NC_022749: tail protein; PP_01140; phage(gi557307545)              2e-111              MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPD
1206906..1207535                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_01141; phage(gi557307546)      7e-55               MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTAL
1207576..1207950                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; PP_01142; phage(gi557307547)     4e-11               MDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFI
complement(1207922..1208524)       PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; PP_01143; phage(gi557307548)     1e-87               MHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGIPACSCLDAPGTHKAGYAICRSADFNS
complement(1208524..1209063)       PHAGE_Entero_HK106_NC_019768: side tail fiber protein; PP_01144; phage(gi428783303)     9e-49               MMPFACYFFIFINVGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGE
1209090..1209644                   PHAGE_Entero_Fels_2_NC_010463: DNA-invertase; PP_01145; phage(gi169936026)           1e-88               MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSM
1209751..1210584                   PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; PP_01146; phage(gi148750872)      4e-05               MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRK
1210818..1210982                   isocitrate dehydrogenase [Shigella sonnei Ss046] gi|74311695|ref|YP_310114.1|;  PP_01147     1e-23               MLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGEAIIENM
complement(1211709..1211822)       hypothetical; PP_01148                                                               N/A                 MYFSQEQVKSFLYNSKIETLFSCHAYIHYYRYIKRQP
complement(1212108..1212512)       PHAGE_Entero_HK629_NC_019711: putative envelope protein; PP_01149; phage(gi428782079)     2e-29               MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKN
1216076..1216089                   attR                                                                                 N/A                 ATTCATCTTATTTT

#### region 3 ####
complement(1409219..1410154)       PHAGE_Parame_bursaria_Chlorella_virus_FR483_NC_008603: hypothetical protein FR483_N404R; PP_01345; phage(gi155370502)     4e-08               MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINF
1410105..1410130                   attL                                                                                 N/A                 TTGTTCAGGTTGTATTGTTCTTTCTT
complement(1410206..1411384)       PROPHAGE_Escher_Sakai: putative integrase; PP_01346; phage(gi15832267)               5e-85               MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDI
complement(1411443..1411658)       hypothetical protein SSON53_10525 [Shigella sonnei 53G] gi|383178640|ref|YP_005456645.1|;  PP_01347     4e-36               MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKD
complement(1412190..1412999)       PHAGE_Entero_epsilon15_NC_004775: RecT; PP_01348; phage(gi30387413)                  1e-81               MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG
complement(1412992..1415592)       PHAGE_Salmon_SPN3UB_NC_019545: RecE; PP_01349; phage(gi423262421)                    3e-68               MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEI
complement(1415694..1415969)       hypothetical protein ECBD_2266 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253773649|ref|YP_003036480.1|;  PP_01350     5e-45               MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNL
complement(1416044..1416220)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; PP_01351; phage(gi423262423)     1e-05               MVMTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL
complement(1416214..1416435)       PHAGE_Escher_P13374_NC_018846: host killing protein; PP_01352; phage(gi410491620)     1e-05               MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVFLGRDGLPVKA
1416937..1417365                   hypothetical protein ECBD_2263 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253773646|ref|YP_003036477.1|;  PP_01353     6e-77               MYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRL
complement(1417362..1417517)       PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; PP_01354; phage(gi472340166)     9e-10               MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS
complement(1417528..1417662)       hypothetical protein Z2402 [Escherichia coli O157:H7 str. EDL933] gi|15801810|ref|NP_287828.1|;  PP_01355     3e-19               MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM
1418890..1419312                   PHAGE_Entero_mEp237_NC_019704: CII protein; PP_01356; phage(gi435439306)             3e-08               MKIKHEHIESVLFALAAEKGQAWVANAITEEYLRQGGGELPLVPGKDWNNQQNIYHRWLKGETKTQREKI
1419325..1420182                   PHAGE_Salmon_SPN3UB_NC_019545: PrpO; PP_01357; phage(gi423262427)                    1e-22               MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIAR
1420189..1420935                   PHAGE_Salmon_SPN3UB_NC_019545: DNA replication protein DnaC; PP_01358; phage(gi423262428)     8e-75               MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRK
1420907..1421518                   DNA-binding protein [Escherichia coli str. K-12 substr. W3110] gi|388477444|ref|YP_489632.1|;  PP_01359     9e-100              MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVA
1421545..1421850                   PHAGE_Entero_HK630_NC_019723: cell lysis protein Rz; PP_01360; phage(gi428782852)     3e-47               MQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTA
1421988..1423445                   potassium transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|388477447|ref|YP_489635.1|;  PP_01361     0.0                 MNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQLRTR
1423583..1423846                   PHAGE_Psychr_pOW20_A_NC_020841: DNA methylase; PP_01362; phage(gi472339820)          7e-21               MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDEKGEIIAGHGRVMAAEMLKMD
1423827..1424186                   hypothetical protein Y75_p1344 [Escherichia coli str. K-12 substr. W3110] gi|388477449|ref|YP_489637.1|;  PP_01363     8e-61               MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKGVGELVN
1424363..1424494                   putative phage protein [Escherichia coli ETEC H10407] gi|387611303|ref|YP_006114419.1|;  PP_01364     4e-17               VPLPLSLTEINEYLATHPVLIERDEFEAVIFALDDQYFQEQCV
1424660..1425688                   PHAGE_Escher_HK639_NC_016158: tail length tape measure protein; PP_01365; phage(gi356870615)     7e-27               MAEQTSRLAIIIDSTGAKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAI
complement(1425952..1426932)       PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; PP_01366; phage(gi16131377)     0.0                 MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWY
1427020..1427190                   PHAGE_Entero_cdtI_NC_009514: putative Lom-like outer membrane protein; PP_01367; phage(gi148609401)     2e-27               VLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
complement(1427191..1427364)       PHAGE_Entero_BP_4795_NC_004813: hypothetical protein PBV4795_ORF74; PP_01368; phage(gi157166059)     9e-29               VFTTTVVLLRFAFSWIVQFCTGFPVPSFSTPEIFTAIFTPQKSPPEPAGCHNTVLPG
complement(1427478..1427711)       hypothetical; PP_01370                                                               N/A                 VLSPQHQPHGLPPHGLMCWHHWLTSSRLPCSVPPRTRYAPPLPPSVQNGAVPPDGHHPPSWHRENHSAYR
complement(1427752..1428489)       PHAGE_Celeri_P12053L_NC_018280: putative phage tail fiber protein; PP_01369; phage(gi399528893)     1e-12               VALLFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAALACSVAS
1428525..1428659                   hypothetical protein ECNA114_0896 [Escherichia coli NA114] gi|386618413|ref|YP_006137993.1|;  PP_01371     1e-15               VRRRQLRAKVRRNPRQRAPRQQLNGQRILHPPWRLRMQVRRKRG
1428620..1430617                   PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; PP_01372; phage(gi16129506)     1e-105              VALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKT
1430617..1431192                   PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; PP_01373; phage(gi16129505)     1e-108              MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVED
complement(1431290..1431880)       PHAGE_Escher_D108_NC_013594: G region invertase; PP_01374; phage(gi281199698)        8e-25               MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTK
1433165..1433190                   attR                                                                                 N/A                 TTGTTCAGGTTGTATTGTTCTTTCTT

#### region 4 ####
1617061..1617072                   attL                                                                                 N/A                 TAACGGCAGCAA
1627421..1627624                   PHAGE_Salmon_SSU5_JQ965645: putative selenium-binding protein YdfZ; PP_01553; phage(gi390013937)     1e-13               MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN
complement(1627659..1629119)       PHAGE_Microm_MpV1_NC_014767: hypothetical protein; PP_01554; phage(gi313768442)      2e-40               MGNNLLSAKATLPVYDLNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQ
complement(1629208..1630491)       PHAGE_Burkho_phi1026b_NC_005284: gp59; PP_01555; phage(gi38707949)                   1e-33               MDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMG
1631353..1631511                   hypothetical protein ECBD_2249 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253773632|ref|YP_003036463.1|;  PP_01556     5e-22               VEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
1631828..1632418                   PHAGE_Escher_D108_NC_013594: G region invertase; PP_01557; phage(gi281199698)        6e-25               MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTK
complement(1632516..1633091)       PROPHAGE_Escher_MG1655: Qin prophage; predicted tail fibre assembly protein; PP_01558; phage(gi16129505)     3e-109              MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVED
complement(1633091..1634053)       PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; PP_01559; phage(gi16129506)     0.0                 VNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTT
complement(1634004..1634573)       PHAGE_Entero_HK630_NC_019723: terminase small subunit nu1; PP_01560; phage(gi428782788)     4e-94               MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELR
1635022..1635195                   PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein YYZ_gp48; PP_01561; phage(gi209427772)     7e-10               MIEQINIALEQKGSGNFSAWVIEACRRRLCSEKRVSSEANKEKSDITELLRKQVRPD
complement(1635815..1635988)       Qin prophage hypothetical protein [Escherichia coli W] gi|386608932|ref|YP_006124418.1|;  PP_01562     2e-23               MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI
complement(1636661..1636873)       PHAGE_Lactoc_bIL312_NC_002671: Csp; PP_01563; phage(gi13095918)                      2e-15               MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL
complement(1637236..1637718)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; PP_01564; phage(gi16765210)     2e-53               MVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISA
complement(1637730..1638263)       PHAGE_Entero_mEp460_NC_019716: endolysin; PP_01565; phage(gi428782372)               3e-97               MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLS
complement(1638260..1638571)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; PP_01566; phage(gi428782371)     1e-29               MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAE
complement(1638576..1638782)       PHAGE_Entero_mEp460_NC_019716: porin; PP_01567; phage(gi428782370)                   2e-31               MDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE
complement(1639545..1639760)       PHAGE_Lactoc_bIL312_NC_002671: Csp; PP_01568; phage(gi13095918)                      7e-16               MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIIT
1640061..1640273                   cold shock protein; Qin prophage [Escherichia fergusonii ATCC 35469] gi|218551642|ref|YP_002385434.1|;  PP_01569     6e-32               LSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS
complement(1640695..1641447)       PHAGE_Entero_mEp460_NC_019716: late gene regulator; PP_01570; phage(gi428782366)     5e-137              MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLN
complement(1641461..1642510)       PHAGE_Entero_mEp460_NC_019716: hypothetical protein; PP_01571; phage(gi428782365)     2e-113              VRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNE
complement(1642857..1643108)       Qin prophage; hypothetical protein [Escherichia coli W] gi|386608944|ref|YP_006124430.1|;  PP_01572     2e-40               MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALINFVDARVTDGFILREGEFVTSLQALKE
complement(1643170..1643286)       hypothetical protein CE10_1832 [Escherichia coli O7:K1 str. CE10] gi|386624180|ref|YP_006143908.1|;  PP_01573     1e-12               VAGILNAPALNPLRRVFVFIFNAFEVLDGAGIESKILK
complement(1643839..1644078)       bifunctional antitoxin/transcriptional repressor RelB [Shigella flexneri 5 str. 8401] gi|110805508|ref|YP_689028.1|;  PP_01574     3e-36               MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPK
1644611..1644943                   Qin prophage hypothetical protein [Escherichia coli W] gi|386608948|ref|YP_006124434.1|;  PP_01575     7e-54               MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALVQKQIESLWAQ
complement(1645552..1645842)       hypothetical protein Y75_p1544 [Escherichia coli str. K-12 substr. W3110] gi|388477644|ref|YP_489832.1|;  PP_01576     7e-49               MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFER
complement(1645826..1646056)       PHAGE_Pectob_ZF40_NC_019522: putative cro anti-repressor; PP_01577; phage(gi422936651)     2e-08               MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKRAGRL
1646714..1646869                   PHAGE_Salico_CGphi29_NC_020844: hypothetical protein; PP_01578; phage(gi472340166)     3e-09               MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE
1646871..1646999                   hypothetical protein ECW_m1736 [Escherichia coli W] gi|386608962|ref|YP_006124448.1|;  PP_01579     1e-15               MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
1647029..1647247                   hypothetical protein ECW_m1737 [Escherichia coli W] gi|386608963|ref|YP_006124449.1|;  PP_01580     8e-34               MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITY
complement(1647251..1647415)       hypothetical protein [Escherichia coli DH1] gi|386595614|ref|YP_006092014.1|;  PP_01581     1e-23               MNQLPRHALSRYGLTFQGNILSVNCQFRMRTRVRRTHSTSPVENSLITNLSFVD
complement(1647616..1647798)       hypothetical protein ECNA114_4765 [Escherichia coli NA114] gi|386622308|ref|YP_006141888.1|;  PP_01583     3e-29               MNFVMQCLVPPGDVNQLTINAGYRESTHNTVFGFNCSACAQPHSPHHKIHFKKGGRAVTE
1647815..1648003                   Qin prophage; cell division inhibition protein [Escherichia coli W] gi|386608965|ref|YP_006124451.1|;  PP_01582     4e-28               MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ
1648000..1648191                   Qin prophage; hypothetical protein [Escherichia coli W] gi|386608966|ref|YP_006124452.1|;  PP_01584     6e-29               MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
1648284..1649204                   hypothetical protein Y75_p1552 [Escherichia coli str. K-12 substr. W3110] gi|388477652|ref|YP_489840.1|;  PP_01585     0.0                 MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRP
1649201..1649743                   PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; PP_01586; phage(gi24112460)     2e-106              VKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSS
1649598..1649609                   attR                                                                                 N/A                 TAACGGCAGCAA
1649718..1650914                   PHAGE_Entero_YYZ_2008_NC_011356: putative integrase; PP_01587; phage(gi209427727)     4e-135              VITDVWKYRGKSTGELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAK

#### region 5 ####
2463782..2463797                   attL                                                                                 N/A                 TTGCAGGTTCGATTCC
2463937..2465130                   PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; PP_02377; phage(gi16130281)     0.0                 VDKIILPTGFLPMLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLM
2465642..2466562                   PHAGE_Shigel_SfIV_NC_022749: bactoprenol glucosyltransferase; PP_02378; phage(gi557307552)     8e-160              MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNF
2466559..2467890                   PHAGE_Shigel_SfIV_NC_022749: serotype specific glucosyltransferase; PP_02379; phage(gi557307551)     6e-86               MNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIPAFTYDLPLLYKLKGHIDSIDSYEYIS
2468231..2468533                   PHAGE_Shigel_SfIV_NC_022749: tail fiber assembly protein; PP_02380; phage(gi557307548)     7e-45               MRPATIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSR
complement(2468505..2468897)       PHAGE_Entero_c_1_NC_019706: tail fiber assembly protein; PP_02381; phage(gi428781758)     2e-26               MKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLIN
complement(2468972..2469565)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02382; phage(gi557307546)      2e-53               LVIPRTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKL
complement(2469540..2469815)       PHAGE_Shigel_SfII_NC_021857: DNA adenine methylase; PP_02383; phage(gi526244677)     3e-50               MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAH
complement(2469815..2470294)       PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02384; phage(gi557307568)      1e-84               LNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQP
complement(2470306..2470674)       PHAGE_Shigel_SfIV_NC_022749: replication protein; PP_02385; phage(gi557307567)       3e-71               LTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRN
complement(2470824..2470997)       hypothetical; PP_02386                                                               N/A                 MFISLTLRSFRQRHFLNCQTLTRQNLTHQNLTRQNLMRRNLAKNRVFTRQNLAGIRQ
2471032..2471394                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02387; phage(gi557307560)      6e-62               MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRP
2471460..2472284                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02388; phage(gi557307559)      9e-152              MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRY
2472412..2472948                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02389; phage(gi557307558)      1e-99               MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHD
2472960..2473301                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02390; phage(gi557307557)      1e-62               MEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGW
2473301..2473606                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; PP_02391; phage(gi557307556)      5e-52               MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDN
2473703..2473718                   attR                                                                                 N/A                 TTGCAGGTTCGATTCC
2473738..2473938                   PHAGE_Entero_HK633_NC_019719: hypothetical protein; PP_02392; phage(gi428782548)     4e-34               MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG
complement(2474122..2475057)       PHAGE_Burkho_phi1026b_NC_005284: gp58; PP_02393; phage(gi38707948)                   1e-15               MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVE
