gi|00000000|ref|AL111168.1|  Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome. 1641481, gc%: 30.55%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(182068..182787)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; Cj0186c; phage(gi725949539)     1.56e-13            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQKKEKNG
complement(182859..183425)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; Cj0187c; phage(gi326784531)     1.97e-34            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEIVLCLCNKKDAFGIQRAKKFGLNTVIIDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(183416..184786)         putative kinase; Cj0188c                                                             N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(184770..185468)         conserved hypothetical protein Cj0189c; Cj0189c                                      N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(185470..186975)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; Cj0190c; phage(gi15833954)     2.18e-87            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN
complement(186972..187499)         PHAGE_Synech_ACG_2014f_NC_026927: baseplate tail tube initiator; Cj0191c; phage(gi100217)     5.48e-15            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(187535..188119)         PHAGE_Bacill_G_NC_023719: gp257; Cj0192c; phage(gi593777713)                         3.30e-58            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(188119..189453)         trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone); Cj0193c            N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK
189596..190168                     PHAGE_Strept_Dp_1_NC_015274: FolE; Cj0194; phage(gi327198319)                        3.56e-50            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1064895..1065881)       PHAGE_Prochl_P_SSM2_NC_006883: nucleotide sugar epimerase; Cj1131c; phage(gi61806141)     1.84e-36            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKTRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC
complement(1065939..1066733)       PHAGE_Brucel_Pr_NC_019447: putative DNA-PolB associated Exonuclease; Cj1132c; phage(gi418487886)     3.36e-08            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENKLEKIHEYCESDVLNTYMLFLKYELIKANVDEEDYVGFLSYMRDFLCAKKSDRSYTEVFAKACESEISKVRS
1066799..1067827                   heptosyltransferase I; Cj1133                                                        N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGILKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNNFGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFSVDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWLAWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMNLIIGNDSGPTHLAFALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKLAKGLLNEK
1067817..1068704                   putative lipid A biosynthesis lauroyl acyltransferase; Cj1134                        N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARIAFYLNKKHRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFINENFLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSRTQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCVENESVRLKFFNKEVNYQMGASLIAQRSNALIIPVYAYKEDGKFCIEFFKVKDSQNASLEELTLYQAQSCEEMIKKRPWEYFFFHRRFASYNKEIYKDAK
1068701..1070248                   PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; Cj1135; phage(gi9630147)        4.54e-07            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MNLKQISAIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTLNIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKNLELQEDNIIALSRKNLYKGEWIKACGWWPDYVWRIFNKNFTRFNDNLVHESLVLPSNAKKIYLKNGLRHYAFRDISHLIDKMQYYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYFLKNGFLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLDSVKNLAFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRAAKSRNNAIKASKSEYIILIDGDMILEKDFVKNHLEFAKRKVILQGSRVILNKNESEEILKNNNYSLAFNKKGFKNQRSIFLAKCVYKFSKLTKKFFKKSQLVKGSKTCNMSFYKSDFEAIEGFNEKFIGWGREDSEFVARFLFNDGVFKRLKFNALAYHIYHEENSKNMLEINHQIYLETIKNEKTTWR
1070252..1071424                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; Cj1136; phage(gi30043988)     2.08e-06            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKKVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYETQYIEKENELNVFKIIGDNPQNIYKIYKYKNALASDKLEISKIDYIIFLDSDNYWELNCIEECVVRMQNVDVLWFDHACIYDDGIEDKGQKTRMNVFNFTQECTITPRDYAKQAIKVGSRDISFSWGGMIDFSFLKQLKLKFINKIINEDIHFGMVLFASADSIYILPKRLYLCRLRANSISNHDKKVTKANVSEYFKDLYEFFGENAKEAKNYLKAASRMITALELIEFFKDQKNENSQAIKEAFLPFYVKKALMIKKFKKDPLNLKEKLPIIKPFIQTKIPYDLWKIWQKIKGILDKINFAK
complement(1071408..1072403)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; Cj1137c; phage(gi100232)     4.98e-13            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MQIQQNNSLIYNTLTKKLSSFIPIKSTRRKLRNHIQYKLEHPKVTNYLSNNYINPFLEGKIPHFDFEKKHYFKNDKIIWQFWYQGKNQASPMIQQCFNSVQSQMKDDYTIIILDKDNIKDYLDFPPFVIEKLENNFFGEKTITFFSDLLRVCLLATYGGIWCDASIFLSSKIPSELCDKDFFTFERSKIKPSKEKLKKFIKSGYFSYGYFNWNDDFKVKMLSSFMIAKTNNTFIQTLKDILMNYWKNEQSSENHYYFILHIIFELLKEHGFVNDIYKNMSDIECHLLQFSAKEKFNSTLWEEIQKQSFLHKLTHFKSIKKDSMIDKIILQS
1072461..1073630                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; Cj1138; phage(gi30043988)     8.36e-06            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKTVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYKLKNKTQTIKENSLIEFNIEGNNPYEIYTVYKSYKAFNNEQDLTNFTYPIIDYIIFLDSDDYWELNCIEECVPRMDGVDVVWFDSIEYHDIEKSYFKHHSRLKDINIKKECRINPIEWLKLLRQNKIKDFAFAWSGIIDFDYIKDKKMKFKDAIFAEDHLFGILLFSQAKNIYVYPKVFYYYRIRANSLTNQDKKITKDNILPYFKDIFIAFEENATLAKEYFKYVSWVETSLELVRFVENYHDKKISSLLKDTILYFYIKNAFKIKKFDKDPLCIKEKLQLLKPYKISKIRYKVMKFLISLRN

#### region 3 ####
complement(1358036..1358701)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; Cj1423c; phage(gi100148)         7.22e-09            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MQAIILCGGLGTRLKSIIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKETLKFVKNEAYVLNGDTFFDIDLSKLKLNESKICLALKQMNDFDRYGTVNVDEQDLVISFEEKVFKKQGLINGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYHFLINN
complement(1358689..1359294)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; Cj1424c; phage(gi725949171)     1.24e-20            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MENLNSYIKGHFADSILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALEFCKQKEIISIGLSGASGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
complement(1359282..1360301)       PHAGE_Caulob_Cr30_NC_025422: D,D-heptose 7-phosphate kinase; Cj1425c; phage(gi725949173)     1.75e-21            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIKREDGKIIFDSPDTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGVKSWRI
complement(1360321..1361172)       putative methyltransferase family protein; Cj1426c                                   N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MKKEQLEVLKEALNGLIYQIDNHQQARKPIADVERIISELQVLNHWNKQENVYNALHLIQGAIADPQGLGRLNLLLDNARIPKQYYDIFYKMLYVDKYGGGDGYRPVCIDCGGHAGLITDIILHCGGQSYIFEPNIYLNYFLRKKYENNINVKLFQKAVSDRNYETDFIMFGNRILSQGNRIVESVQDSQTEKTYKVQVIDLCEFIENEILTQHKRIYFLKLDIEGMEFEIMKKIIEKKIYKKIDYIACETHEYMFDDSEKKIGELKQLINKCNIQNILLDWI
complement(1361191..1362132)       PHAGE_Synech_ACG_2014f_NC_026927: rIII lysis inhibition protein; Cj1427c; phage(gi100233)     2.48e-13            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCFHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYRDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSANIGEDPDKRDYLVSNTKLEATGWKPDNTLEDGIKELLRAFKMMKVNRFANFN
complement(1362156..1363196)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; Cj1428c; phage(gi100224)     2.19e-68            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVNQQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKLVFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFITLVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYLHNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIGTGIDYSIKEVALMVKNIVGFSGELVFNTSRPDSTMDRLMDCSKIHSLGWKHKIELKDGIKMMYEWYKTQN
complement(1363196..1364122)       hypothetical protein Cj1429c; Cj1429c                                                N/A                 CampylobacterjejunisubspjejuniNCTC11168ATCC700819MEKLLKELNNNIKLSNQLSYQILMSNIISNLDIDKKDKEILLLLLQARDRNYIRINNNEQCYQNIINYLNLIRPLELPLCDLLRIGGNGDGGYVMYNGGGDMSDINAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYDHENIVFHKKFIGNVNNENTITLVQALKDNNLDENKPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFVPMHTHFHNHGKIFYSQGLFFSTTLEVSYLRKNLINLDIMKYRDVAGGFKNLDFPWISNPEIPIRFRGY
complement(1364126..1364671)       PHAGE_Escher_phAPEC8_NC_020079: putative dTDP-4-dehydrorhamnose 3,5-epimerase; Cj1430c; phage(gi448260371)     4.18e-22            CampylobacterjejunisubspjejuniNCTC11168ATCC700819MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWPTNTPILSDRDILATKNKG
