gi|00000000|ref|AM236084.1|  Rhizobium leguminosarum bv. viciae plasmid pRL10 complete genome, 488135, gc%: 59.60%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
44333..44344                       attL                                                                                 N/A                 GGCGAAGTTTCC
47036..50285                       PHAGE_Strept_Zemlya_NC_021339: DNA polymerase III subunit alpha; pRL100044; phage(gi509141418)     1.05e-97            Rhizobiumleguminosarumbvviciae3841MRYAELQVTSHFSFLRGASGCDELFTTAKSLGIEALGIVDRNSLAGIVRAWEAAKETGVRLVVGCRLDLADGMPILIYPTDRAAYSRLCRLLSLGKERGGKGKCILDLTDVALYADGLLAILVPDEADDACAVQLRKVREIFGDRAYMALTLRRRPNDQLRLHDLNTLAIRHKVRPVVTNDVLFHEPGRRQLQDVVTCIRHRTTIDQAGFLRERHADRFFKPPEEMHRLFSRYPDALARTQEIVDRCRFDMSELTYQYPEEAIIPGLTAQQSLEKFTWEGVRDRYPEGVPDDVVKILNHELDLIRKLDYAPYFLTVYSIVRFARSQDILCQGRGSAANSAVCYVLGITAIDPAANDLLFERFISAERNEPPDIDVDFEHARREEVIQWIYKTYGRQKAALCATVTRYRAKGALRDVGKALGLPEDTITALSADVWGWSKEGVGEKQVNELNMNMSDRRLRLTLELAQQLMGAPRHLGQHPGGFVLTNDRLDELVPIEQARMEDRQTIEWDKDDIEALKFMKVDVLALGMLTCMAKGFALLQEHKGVTLDLATIEPEDPPTYAMIRKADTLGTFQIESRAQMSMLPRLKPQTYYDLVIQVAIVRPGPIQGDMVHPYLRRREGKEAVVYPKPELEAVLGKTLGVPLFQESAMKVAIVCAGFTAGEADALRRSMATFKFTGGVSKFKDKLVQGMVKNGYTEEFAEKTFSQLEGFGSYGFPESHAASFALIAYASSYIKCHYPDVFCAALINAQPMGFYAPAQIVTDARAHGVTIRPVCINRSRWDCTLEEIEGTDRHAVRLGMRLVRGLPEQDAAKIAVARGDEPFVSIDDMWRRAGVPSASLVKLAEADAFRPGLKLERRDALWAIKALRDEPLPLFAAAADRERAVIAETAGTGCDASADDGGRQCRRGLRAYGRDAACPSGQLPARRSHPPKYRHLRRGDLGTRRALADDGGAGSGSAKAGQCQGRHVHDHRGDGRCQYCRLAPLKTASHRAWIRNDGDQRQDPARRRRRASGGATDVRSDQRSGESRRAGHISVAVRAWRIRPWITRQPGQPRAAADGRQGANLCTVMPNSAGRAFT
complement(50623..51819)           putative transposase related protein; pRL100046                                      N/A                 Rhizobiumleguminosarumbvviciae3841MARPGPEVADIFRRYGEAYRAQHTSLSTAQRRVMTAIELCRTAALGGHVEACDQCGHRRIAFNSCRDRHCPRCQSLARAQWLEDRRAELLDTQYFHVVFTLPEAIAAIAYQNKALVYGLLFRATAETLRTIAADPKHLGAEIGFFAVLHTWGQNLLHHPHLHCVVPGGGFSPDGTRWITCKRGFFLPVRVLSRLFRRLFLEHLQKAFDAGKLQFFSDLRALSDRNAFRRTVAPLRKADWVVYAKPPFAGPEQVLDYVGRYTHRVAISNNRLVDIEDGAVRFRWKDYRHGDRQKVMTVSADEFIRRFLLHVLPEGFHRIRYYGFLGNRYREQKLARCRDLLGMPVPEPSESRASKDYRDRYEELTGCSLRQCPACRQGQMITIETFDGVSGPPRYWDTS
complement(51826..52737)           PHAGE_Mycoba_32HC_NC_023602: integrase; pRL100047; phage(gi589893371)                6.20e-18            Rhizobiumleguminosarumbvviciae3841MQPFHQTEELIMTPLRQRMSEDMQVRNFSLNTQLAYLQQVSLFARYFSKSPDLLGREDVRIYQVYLANEKKLAPSSIHTAISALRFLYKVTLERDWVPEEVLPLPKKPQKLPIILSPDEVQHFLGCVLDPKHHAILTTCYAAGLRISEAVQLKPTDIDSQRMVVRVEQGKGQKDRYVMLSPKLLEILRDYWKMRRPKAWLFPGDRAGQPITRDAVGEACAKAHNLSRLSKPVTPHSLRHAFAVHLLEAGADVRTIQLLLGHRSLATTAHYLRIATNKVCATSSPFELLPRPAPTLPPAKPEYF
52849..52860                       attL                                                                                 N/A                 ACTATGCCGAGC
53267..54184                       PHAGE_Thermu_P2345_NC_009803: XerD-like integrase; pRL100048; phage(gi157265299)     1.71e-09            Rhizobiumleguminosarumbvviciae3841MPTGRESRTDREGRHAFRRGATSSRLFEALDLWARLVGTALSSDRLGRAQWRSQLTHIEVRNYLANNFEGRKSNSLGTWFSRLRVLLRFLHASALTEHDLSAAVPSPRNLRFSALPAYMSVSQLKSVLEACDLSTIPGRRDLAVLLLLSRLGLRASEVALLSFDDIDWRSGLLRVNGKGGRVATMPLPKDVGAAISDYILHGRPTYGSRTIFHRVQTPCTPFETATPVILIARRALKRAKISGTRSHHAHIFRHTFATIAVRSGVGMTELAQLLRHKDPDTTRIYAKFDIEGLRSLSRPWAGVVL
54184..55101                       PHAGE_Strept_VWB_NC_005345: integrase; pRL100049; phage(gi53869481)                  2.00e-06            Rhizobiumleguminosarumbvviciae3841MDMSDALEQYLTLRRSLGFKLQTQESRLRNFVRYATALGELRVTAKTAVDWASHQCGPATWSSRLSTVRAFARHLQVVDPQTEIPPPHIFPPQRRPRPFIYSDEQVADLLKSMLDLHPGSFRGPTYHYFLGLLASTGLRFSEAARLLREDADLDAGMLTIRETKFGKTRIVPLHPSTTLALGRYAAIRDDHPVRRVSQFFFTGDLGRPLIHANPHFSFILWTRQAGLRQPEQRDGPRIHDLRHTFAVRTLLSWYRDGEDTERRLPELSTYLGHNYVSATYWYLTAHPDLLDQARLRLDARWEAAK
55098..56093                       PHAGE_Bacill_Mgbh1_NC_041879: hypothetical protein; pRL100050; phage(gi100037)       2.82e-24            Rhizobiumleguminosarumbvviciae3841MTNPLPRLIERFFGQRLARQRNVSPHTIASYRDTFKLLLKFAHRRTGKYPSALRLEDLDAELIVAFLDDLDSGRHASPATYNLRLTAIRGFFRFLAFEEPAYSGQIQRVLAIPGKIGSKREVQFLLRNEIEAILSAPDRRTWVGRRDYVLLLTAVQTGMRLSELVGLDRSAVTIGTGAHIRCFGKGRKERTTPITRMLNATLKAWLDEPPVGNGNALFPTVHGGQMSPDAVQYLLAKYVLAASKGCLSLRSKRVSPHVLRHSAAMELLDAGVDSTVISLWLGHESTRSTQPYLHAHLAIKEAALAKIDPFDKQSPGRFRAGDELLAFLDKL
complement(56208..56684)           hypothetical protein; pRL100051                                                      N/A                 Rhizobiumleguminosarumbvviciae3841MIVTIPHQSHFPDIGDQEIASLGVPFAFVSVFDHWLTEPECMATNLFTYRSAFKANQLQDYLAGERKFLALYNHLGNAGTIVNCPGVLRSINSASSEFQRILRRSLREALLMDIYLEGYGVRILGNFDRTDVIVADTREQLDVLEAEIAKFGLHMLRK
56781..56792                       attR                                                                                 N/A                 ACTATGCCGAGC
complement(56983..57186)           PHAGE_Lactoc_bIL312_NC_002671: Csp; pRL100052; phage(gi13095918)                     8.15e-12            Rhizobiumleguminosarumbvviciae3841MPTGTVKFFNDDKGFGFITPETGGTDVFVHVSALQQGGSLREGDKVTFEVGQDRKTGKSKAENVSVL
complement(57743..58066)           PHAGE_Escher_172_1_NC_028903: helix-turn-helix motif protein; pRL100053; phage(gi971754318)     3.15e-10            Rhizobiumleguminosarumbvviciae3841MTQLEYDNIFEAITGDPIEAADLTLRSDLVNTLVAIFKERGWKNADIGAALDIPQSRVSELVRGKIAVLSVQKLFGYLAVLGYRFKPSLDGNHHVVCRVEEKQKEAA
58740..58751                       attR                                                                                 N/A                 GGCGAAGTTTCC

#### region 2 ####
119499..119996                     PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; pRL100123; phage(gi514231155)     6.35e-31            Rhizobiumleguminosarumbvviciae3841MLRRLVAACRIVSLCVAVAFAAKSGVGNLDRGDTRLLISECKLHALLRTQCAYVLATAFHETGGLMMPVRETFATSDDQAIACLDSAWAKGKLPWVTSPYWRQGWFGRGYSQLTHENNYRTVSIKLGIDLVSFPAKALIPEIAAKVLVMGLKEGWFTVSAIFHAH
complement(120049..121659)         PHAGE_Stx2_c_1717_NC_011357: transposase; pRL100124; phage(gi209447153)              1.99e-69            Rhizobiumleguminosarumbvviciae3841RGDAVQIQNWDDPNRRTERCRADGAVAAEIAALKAEKEALSRQVVKLEEELALARLHRFAPRSEKHVDRLFNEAEEAADEDDPDHGDDVADLPDTGLPAVESAAGKKRGRRPLPEDLPRERVEYDLPDDQKVCPCCDSQMHRMGEAITEQLNIEVKAKVLQNVRFKYACRHCDRTGINTPVVIAPMPPQPLPGSIATASTLAFALVHKYVDGTPLYRVAQTFERAGVPISRGALAHWVIGSSERHLHRIYDALRLRLQSQPLIHGDETTVQVLKEKDKEATSTSYMWAYRSSDDSEEPIVLLDYQQGRGQVHPQTFLGNYSGILVTDGYTAWRTLHGATHVGCMAHSRRRFVEALKTRKNGGGPPEQALRFFEQLYRIEKQARDQTPDAGETQADCIRRFRQQHSLPVLIALKTWLDNIAPKVVPDTKLGDAVSYTLNQWDYLTRYISDGRMPIDNNILERDIRVFATGRKSWLFSDTADGARASAVIYSLMLTCRACGVDPLTWLRHVLAELPQREEAADIGDLLPFNFSKASAA
complement(121681..122034)         PHAGE_Stx2_c_1717_NC_011357: transposase; pRL100125; phage(gi209447152)              9.58e-14            Rhizobiumleguminosarumbvviciae3841MFRLGADLKVYLHREPIDFRAGINSLAVLVQETMALDPFAPAVFAFCNRRRDRVKLLFFDRSGFVMVLKKLTEDRFRWPRRETAVVTLSSEQLHWILDGIDIDAMIRHPVRQYQIAG
complement(122015..122497)         PHAGE_Stx2_c_1717_NC_011357: truncated transposase; pRL100126; phage(gi209447151)     2.57e-09            Rhizobiumleguminosarumbvviciae3841MWCPLKRGGHQVMDEGQKLAVRLVGLNGRRRFDQGSKDRLVAACLEPGASVSKLAREHGVNANLVWKWIRKHTQAHPLSPSSTSAFIPVQVAAPSREFDIEMPAADREERLPRMDRNGPLSSPAKVSASLPNGVRLTLECNDLSGLTAIIGALGHVQTGR
complement(123218..123898)         PHAGE_Bacill_G_NC_023719: gp245; pRL100127; phage(gi593777701)                       4.78e-10            Rhizobiumleguminosarumbvviciae3841MVKNIAFPRRTTMLEVKSINVSIGGVPILRDVSMKVEAHSMVGIVGRNGAGKTTLMRAIMGLLPLRAGSIHYEKKDISREAPHLRVHHQMGFAPEDRRLIPELTVEENLLIPAWAAGVTDAQKRLDDVYALIPEAADFRHRRALQLSGGQQKLVAIGRARMTGTQLLMLDEPFEGVAPALSKRISEVVASLRPLGLSILLSGADLRHAGKGLDMVYRMDRGQITSI
complement(123855..124631)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; pRL100128; phage(gi371496158)        3.59e-18            Rhizobiumleguminosarumbvviciae3841MKPIIEAKSLVKRFGAVTAANDVNVDIMSGTISGLIGTNGAGKTTFINMITGYLGPDSGSILLEGQEIVGLSPRQITRRGVARSFQIPQLFNSLTAIENLMFAYSATGSVGAKGFSILSDDELAIHADETLEVFGLGAFRNSIAGTMPEGIRKLLDIAIAMVGKPKVLFLDEPTSGVASEEKFSVMDRIIDATRVAGVSVLFVEHDMEIVRRYSDRVLAFFEGRVLIDGPPETVLSDRQVRELIIGEEHRVPKEDNHA
