gi|00000000|ref|AM990992.1|  Staphylococcus aureus subsp. aureus ST398 complete genome. 2872582, gc%: 32.92%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
370457..370469                     attL                                                                                 N/A                 AAAAAGGGCAGAT
complement(370475..371680)         PHAGE_Staphy_SMSAP5_NC_019513: site-specific recombinase; SAPIG0334; phage(gi422935807)     0.0                 StaphylococcusaureussubspaureusST398MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEDKIKEKLNNQSSSILKTLTFHTLLDEWFEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINELSNIYSENQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKDVDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSRRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
371791..372405                     PHAGE_Staphy_StauST398_2_NC_021323: phi PVL-like protein; SAPIG0336; phage(gi509139880)     5.63e-142           StaphylococcusaureussubspaureusST398MTQFLGALLLTGVLGYIPYKYLTMIGLVSEKNKVINTPVLLIFSIETCLIWFYSFIIFNNVDLKNLNLIQLLTGLKANILFLFIFVLTVFVFNPLIVKFIIWLINITRKFMKLDCISLLDKRDKLFNNNGKPVFIVIKDFENRIIEEGELKTYNSAGSDFDLLEVERQDFKVSDLASNDELYIKHTLVDLKQQIKLDLYLMNEY
complement(372402..372527)         PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0335; phage(gi509139881)     2.29e-20            StaphylococcusaureussubspaureusST398MVDKNKKQETTRSNPLNKSFEKSGASEKLKSTLSEKAKKKD
complement(372778..373362)         PHAGE_Staphy_42E_NC_007052: ORF022; SAPIG0337; phage(gi66395530)                     7.14e-92            StaphylococcusaureussubspaureusST398MKRLLGLTLASALVLGACGSHDGDKKEESKKTETKKDNKDKKKETKEKAEAKKENANQNDNNNQVNNENNTNVNNDQQTNRPLTKDEISQRVKNGHNVNGMVDADGNTWYQAQGAGDVIGYTKPDGTQCTVGGCVTPQQQEQINEANYKEMEKYGYSREKYDAIQKEASKLQQQKENGEITAEEFTNRYIELYD
complement(373380..373841)         PHAGE_Staphy_Slt_NC_002661: hypothetical protein; SAPIG0338; phage(gi12719397)       1.01e-106           StaphylococcusaureussubspaureusST398MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSKFNNRKFENYARRHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
complement(373854..374168)         PHAGE_Staphy_71_NC_007059: ORF022; SAPIG0339; phage(gi66396062)                      8.64e-74            StaphylococcusaureussubspaureusST398MCFSKRMKQSREKQGMTLAELGRKIGKTEATVQRYESGNIKNLKNDTIESIATALNVNPAYLMGWVEENDDEVQHRAAHLEGELTDDEWQRVLDYADYIRSKRK
374320..374556                     PHAGE_Staphy_phiMR11_NC_010147: putative transcriptional regulator protein; SAPIG0340; phage(gi162290112)     1.08e-51            StaphylococcusaureussubspaureusST398MPIDAKLLKSKMALKEHNIKTLSEEIGVNRDTLSNMIHGRTKPSYPVINGIYFALELTPQEGRDIFFNEDLRKKKVLT
374570..375346                     PHAGE_Staphy_phiMR11_NC_010147: putative anti-repressor protein; SAPIG0341; phage(gi162290113)     0.0                 StaphylococcusaureussubspaureusST398MQALQIVEQNETHYVDSREVAEMIGKRHDNLVRDIKGYIKVLEDSSKLSSHNFFEESTYVNSQNKVQPCYLLTKKGCDIVANKMTGSKGILFTATYVDAFHKMDEYIKQQAQLNVPQTPMQALEMMFKAQKDQEQFNKQMQQEITGIRHIVGIETKNWRNDTNKMLSAIAQHLGGGAMHQKVKSEAYKALEEKGRCNLKIRMQNRKGKMLANGATKTQINKLSKLDVITDEPRLVEIYISVIKSMAIKYGVDISQFEI
375374..375517                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0343; phage(gi509139886)     2.00e-24            StaphylococcusaureussubspaureusST398MLQKFRIAKEKSKLKLNLLKHANSNLETRNNPELLRAVAELLKEINR
complement(375507..375716)         PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0342; phage(gi509139887)     1.29e-42            StaphylococcusaureussubspaureusST398MKACLYLSNDKFVEIDNLEKVIKSGHRGTVEISKEKIKSSLFTNGSYTFVGDKIVAIASAKIEFIEFID
complement(375986..376351)         PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0344; phage(gi509139888)     8.47e-83            StaphylococcusaureussubspaureusST398MPLISDEFDTLTKDQQYILSVLYKDYLECVKLGSVKLTCNNFGSAKDIHTKYFQKLHFEDVKYDLNKLKNSGFLNGVYASNTIYHVTISDKTVVYFENEFKNNLKSIIDSISKIASIIPGL
376406..376552                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0345; phage(gi509139889)     1.43e-23            StaphylococcusaureussubspaureusST398MNTRSEGLRIGVPQVSSKADASSSYLTEKERNLGAEILELIKKVITAT
376645..376908                     PHAGE_Staphy_47_NC_007054: ORF047; SAPIG0346; phage(gi66395701)                      9.49e-58            StaphylococcusaureussubspaureusST398MPKIIIPPTPENTYRGEEKFVKKLYAKPTEIHQLFGVCRSTVYNWLKYYREDNLGVENLYIDYSATGTLINISKLEEYLIRKHKKWY
377161..377484                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0347; phage(gi509139892)     9.94e-74            StaphylococcusaureussubspaureusST398MTLQQKILSHFATYDNFNPDDVVEVFGVSKTHAKSTLSRLKKKGKVEMESWGKWRVIEAQLHLTVVERKKEILEEQFELLARLNEQSDDPREIEDRIKLMIRLANQF
377499..377861                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0348; phage(gi509139893)     2.02e-79            StaphylococcusaureussubspaureusST398MAILEDIFEELKLLNKNLRVLNTELSTVDSSIVQEKVKEAPMPKEETAQLETIEEVKETSTDLTKDYILSVGKEFLKKADTSDKKEFRNKLNELGADKLSTIKEEHYEKIVDFMEARINA
377858..379024                     PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; SAPIG0349; phage(gi209363569)     0.0                 StaphylococcusaureussubspaureusST398MKLDHSNRAHAKLSASGAKQWLNCPPSIKASEGIADKSSVFAEEGTFAHELSELYFSLKYEGLTQFEFNKAFQNYKRNQYYSEELREYVEEYVANVEEKYNEALSRDDDVIALFETKLDLGKYVPESFGTGDVIIFSGGVLEIIDLKYGKGIEVSAIDNPQLRLYGLGAYELLSLIYDIHTVRMTIIQPRIDNFSTEELPISRLLQWGTDFVKPLARLAYNGEGEFKAGSHCRFCKIKHSCRTRAEYMQNVPQKPPHLLSDEEIAELLYKLPDIKKWADEVEHYALDQAKENDKNYPGWKLVEGRSRRMITDTKAVRDRLVEAGYKPEDITETKLLSITNLEKLIGKKAFSKIAEGFIEKPQGKLTLATESDKRPAIKQSAEDDFDKL
379050..379607                     PHAGE_Staphy_phi7401PVL_NC_020199: hypothetical protein; SAPIG0350; phage(gi448244654)     1.46e-132           StaphylococcusaureussubspaureusST398MKAKVLNKTKVITGKVRASYAHIFEPHSMQEGQEAKYSISLIIPKSDTSTIKAIEQAIEAAKEEGKVSKFGGKVPANLKLPLRDGDTEREDDVNYQDAYFINASSKQAPGIIDQNKIRLTDSGTIVSGDYIRASINLFPFNTNGNKGIAVGLNNIQLVEKGEPLGGASAAEDDFDELDTDDEDFL
379667..381628                     PHAGE_Staphy_StauST398_2_NC_021323: DNA polymerase; SAPIG0351; phage(gi509139896)     0.0                 StaphylococcusaureussubspaureusST398MKFMNIDIETYSSNDISKCGAYKYTEAEDFEILIIAYSIDGGPISAIDMTKVDNEPFHADYETFKIALFDPAVKKYAFNANFERTCLAKHFNKQMPPEEWICTMVNSMRIGLPASLDKVGEVLRLQNQKDKAGKNLIRYFSIPCKPTKVNGGRTRNLPEHDLEKWQQFIDYCIRDVEVEMAIANKIKDFPVTAIEQTYWVFDQHINDRGIKLSKSLMLGANVLDKQSKEELLKQAKHITGLENPNSPTQLLAWLKDEQGLDIPNLQKKTVQDYLKESTGKAKKMLEIRLQMSKTSVKKYNKMHDMMCSDERVRGLFQFYGAGTGRWAGRGVQLQNLTKHYISDTELEIARDLIKEQRFDDLDLLLNVHPQDLLSQLVRTTFTAEEGNELAVSDFSAIEARVIAWYAKEQWRLDVFNTHGKIYEASASQMFNVPVESITKGDPLRQKGKVSELALGYQGGAGALKAMGALEMGIEENELQGLVDSWRNANPNIVNFWKACQEAAINTVKSRKTHHTHGLRFYMKKGFLMIELPSGRALAYPKASVGENSWGSQVVEFMGLDLNRKWSKLKTYGGKLVENIVQATARDLLAISIARLEASGFKIVGHVHDEVIVEIPRGSNGLKEIETIMNKPVDWAKGLNLNSDGFTSPFYMKD
381825..382226                     PHAGE_Staphy_StauST398_2_NC_021323: putative DNA-binding protein; SAPIG0352; phage(gi509139898)     1.15e-92            StaphylococcusaureussubspaureusST398MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAILNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA
382226..382480                     PHAGE_Staphy_53_NC_007049: ORF061; SAPIG0353; phage(gi66395418)                      1.80e-57            StaphylococcusaureussubspaureusST398MSIISNRKVDMNETQDNVKQPAHYTYGDIEIIDFIEQVTAQYPPQLAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVDRVFDLWE
382486..382728                     PHAGE_Staphy_PVL_NC_002321: hypothetical protein; SAPIG0354; phage(gi9635215)        6.36e-52            StaphylococcusaureussubspaureusST398MTDSARKEYLSRFFGSKRYLYQDNERVAHIHVVNDTYYFHGHIVPGWQGVKKTFDTAEELETYIKQHDLEYEEQKQLTLF
382742..382948                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0355; phage(gi509139901)     5.37e-45            StaphylococcusaureussubspaureusST398MKIKIEKEMNLPELIQWAWDNPKLSGNKRFYSNDVERNCFVTFHVDSILCNVTGYVSINDKFTVQEEI
382951..383358                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0356; phage(gi509139902)     2.16e-57            StaphylococcusaureussubspaureusST398MKIKVKKEMRLDELIKWAWDNPGLATGRNFYPQTKSDIDYKCFSLYDGRNCIIKGFVSADDTFEVEFEEDITEETKVDRLIELFEIQEGDYNSTLYENTSIKECLYGRCVPTKAFYILNDDMTMTLIWKDGELVE
383358..383549                     PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; SAPIG0357; phage(gi100148)       4.42e-36            StaphylococcusaureussubspaureusST398MQTYKVSLCIKFLASKCDYKIKKHYFVQSINEEEAKNMALKLTRKKLPFKTASIEVEKVEVVE
383546..383983                     PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; SAPIG0358; phage(gi422935828)     7.11e-12            StaphylococcusaureussubspaureusST398MMPKYRVWDTETKKMCEVVALDLHNSEVSYSTKENEYGKVIKEFIKTEKMADVELMQSIGINLWGRELYEGDILKVVSTKLWGIERDKTYIYLDATGVVTRNAIGTIIGDVHLLRVFEAEEVREMPTIEYLGNKFENPELLEVPE
383980..384345                     PHAGE_Staphy_SA97_NC_029010: hypothetical protein; SAPIG0359; phage(gi971765342)     4.83e-71            StaphylococcusaureussubspaureusST398MNYETGFQLGVMDARLKKMRKQRDEYKKQRDELIVDIAKLRERNEELENMWRTVKNELLGRYEFYRFRLNELQIESRANKAVAINMGAKINASAILYRMDKLDGTNEFYEFLGQMEDDTNE
384338..384586                     PHAGE_Staphy_Slt_NC_002661: phi PVL ORF 52 analogue; SAPIG0360; phage(gi12719419)     3.64e-50            StaphylococcusaureussubspaureusST398MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGLPNAMQDALKEDIYLDEAIGIMVSQVIYEYEEEQEND
384579..385115                     PHAGE_Staphy_B166_NC_028859: dUTPase; SAPIG0361; phage(gi971749902)                  8.48e-129           StaphylococcusaureussubspaureusST398MTNTLTIDQLQELLQIQKEFDDRIPTRNLNDTVASMIIEFVEWINTLEFFKNWKKQPGKPLDTQLDEIADYLAFSLQLTLTIVDEEDLEETTEVMVDLIENEVTLPKLHSVYFVHVMHTLTEQFVKGIDNSIVQVLIMPFLYANTYYSIDQLIDAYKKKMKRNHERQDGTADAGKGYV
385152..385358                     PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; SAPIG0362; phage(gi971755489)     3.86e-43            StaphylococcusaureussubspaureusST398MTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKEKYEKQVKRDAVIKVGQLFENIRECGK
385355..385741                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0363; phage(gi509139904)     2.39e-87            StaphylococcusaureussubspaureusST398MIKKLKNMDWFDIFIAGILRLFGVIALMLVVISPIYTVASYQNKEVHQGTITDKYNKRQDKEDKFYIVLDNKQVIENSDLLFKKKFDSADIQARLKVGDKVEVKTIGYRIHFLNLYPVLYEVKKVDKQ
385738..385890                     PHAGE_Staphy_YMC/09/04/R1988_NC_022758: integrase regulator RinB; SAPIG0364; phage(gi557308111)     2.16e-29            StaphylococcusaureussubspaureusST398MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDFEKIRAEVSW
385958..386158                     PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; SAPIG0365; phage(gi557308112)     4.42e-40            StaphylococcusaureussubspaureusST398MWIVISIVLAIFLLVLLSSISHKMKTIEALEYMNSYLFKQLVKNNGVEGLEDYENEVERIRKRFKS
386446..388893                     PHAGE_Staphy_phi7401PVL_NC_020199: virulence-associated protein E; SAPIG0366; phage(gi448244658)     0.0                 StaphylococcusaureussubspaureusST398MLDKVTQIETIKYDRDVSYSYAASRLSTHWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVGMDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDKILNEYVDWTDTLEWPTSSREESKTKRLADKQGDPEEKPGIVGAFCRAYTIEEAIETFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSYHNTDPVSGMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKISWDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTGKEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERVEVNWSKLTKEEIDQIWAEAKHYYEQGEELFLNPELEEEMRSIQNKHTEESPYTGIIDEYLNTPIPSNWEDLTIFERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYGVQIAYVRDESLEDLM
complement(388917..389039)         PHAGE_Staphy_47_NC_007054: ORF143; SAPIG0367; phage(gi66395725)                      6.93e-20            StaphylococcusaureussubspaureusST398MLYHLLHQCCITKNDATPTITFYTHVLHHSKNDATSDTTL
389234..389524                     PHAGE_Staphy_vB_SauS_phi2_NC_028862: vrr-nuc domain protein; SAPIG0368; phage(gi971750190)     1.03e-66            StaphylococcusaureussubspaureusST398MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTFGD
389514..390872                     PHAGE_Staphy_StauST398_2_NC_021323: phage helicase; SAPIG0369; phage(gi509139910)     0.0                 StaphylococcusaureussubspaureusST398MAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTPSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRVDTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDNGDVREIHDKKLEKLEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK
390885..391322                     PHAGE_Staphy_42E_NC_007052: ORF030; SAPIG0370; phage(gi66395538)                     1.73e-103           StaphylococcusaureussubspaureusST398MGKASYDIKPGTFKYIESEIYNLQENKKEINRLRMEILNPTKELDTNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRLKYWNKDKKLKIEQIGDACHMHRNTVTTIRKNFVKAIAYHAGIK
391479..391793                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0371; phage(gi509139912)     4.07e-70            StaphylococcusaureussubspaureusST398MTKHNNIYKHGRKSYQYDWFYHSKAWKKLREIALDRDNYLCQMCLREDIVTDANIVHHIIYVDEDFNKALDLDNLMSVCYSCHNKIHANDNDKSNIKRIRVLKI
391921..392226                     PHAGE_Staphy_StauST398_2_NC_021323: terminase small subunit; SAPIG0372; phage(gi509139913)     4.64e-68            StaphylococcusaureussubspaureusST398MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
392216..393907                     PHAGE_Staphy_phi7401PVL_NC_020199: terminase large subunit; SAPIG0373; phage(gi448244664)     0.0                 StaphylococcusaureussubspaureusST398MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIISLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVFDWIIKMNAHYPVEKVTYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDSGEGNIEFISIKDIMR
393912..395150                     PHAGE_Staphy_phi7401PVL_NC_020199: portal protein; SAPIG0374; phage(gi448244665)     0.0                 StaphylococcusaureussubspaureusST398MNVIAKENIVTRIKKKLIDNWIDQSASKLYDFSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES
395134..395907                     PHAGE_Staphy_phi2958PVL_NC_011344: prohead protease; SAPIG0375; phage(gi209363589)     0.0                 StaphylococcusaureussubspaureusST398MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEKREKIKRECEILKMTMSY
395919..397082                     PHAGE_Staphy_StauST398_2_NC_021323: putative capsid protein; SAPIG0376; phage(gi509139917)     0.0                 StaphylococcusaureussubspaureusST398MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGSLPS
397151..397429                     PHAGE_Staphy_StauST398_2_NC_021323: putative DNA packaging protein; SAPIG0377; phage(gi509139918)     4.09e-61            StaphylococcusaureussubspaureusST398MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIARDYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
397441..397773                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0378; phage(gi509139919)     2.15e-76            StaphylococcusaureussubspaureusST398MEFNEFKDRAYFFQYVNKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTIIVRSSKTEYLPQTNHLVKIDRGSYSDKLFNIEEIRIDTPDIGYNTVVLSEK
397770..398171                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0379; phage(gi509139920)     6.11e-92            StaphylococcusaureussubspaureusST398MSVEIKGIPEVLKKLESVYGKQAMQAKSDRALNEASEFFIKALKKEFESFKDTGASIEEMTKSKPYTKVGSQERAVLIEWVGPMNRKNIIHLNEHGYTRDGKKYTPRGFGVIAKTLAASERKYREIIKKGLAR
398172..398567                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0380; phage(gi509139921)     4.20e-91            StaphylococcusaureussubspaureusST398MNILNTVKGILLSDAELKTHINSRIYYYKVTENAETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNHQKTIDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGIPKNIYYKNQRIE
398602..399243                     PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; SAPIG0381; phage(gi509139922)     1.13e-153           StaphylococcusaureussubspaureusST398MAEGQGSYKVGFKRLYVGVFNPEATKVVKRMTWEDEKGGTVDLNITGLAPDLVDMFASNKRVWMKKQGTNEVKSDMSIFNIPSEDLNTVIGRTKDKNGTSWVGENTRAPYVTVIGESEDGLTGQPVYVALLKGTFSLDSIEFKTRGEKAEAPEPTKLTGDWMNRKVDVDGTPQGIVYGYHEGKEGEAEFFKKVFVGYTDSEDHSEDSAGSLPS
399335..399790                     PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; SAPIG0382; phage(gi509139924)     2.24e-102           StaphylococcusaureussubspaureusST398MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQFKTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKTLKYTSEHPEFVTVDERTGAIHGVAEGTSVITATSTDGSDKSGQITVTVTNG
399848..400198                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0383; phage(gi509139925)     8.38e-78            StaphylococcusaureussubspaureusST398MIKFEIKDRKTGKTESYTKEDVTMGEAEKCYEYLELVNQENKKEAPNATKMRQKERQLLVDLFKDEGLTEEDVLNKMSTKTYTKALQDIFREINGEDEEDSETEPEEMGKTEEQSQ
400240..400398                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0384; phage(gi509139926)     5.25e-30            StaphylococcusaureussubspaureusST398MEQYGWTLTEVRKQPYVKLLEILNEENKEETEEKQSEQKVITGTDLRKLFGS
400412..401818                     PHAGE_Staphy_StauST398_2_NC_021323: tail length tape measure protein; SAPIG0385; phage(gi509139927)     0.0                 StaphylococcusaureussubspaureusST398MNEKVEGMTLELKLDHLGVQEGMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELKQVNANYQKAKSSVKDVEKAYLKLVEANKKEKLSLDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQKLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAALNNLERSIDKASSEMKTFNKEQMIAQSHFGKLASQADVMSKKFSSIGDKMTSLGRTMTMGVSTPITLGLGAALKTSADFEGQMSRVGAIAQASSKDLKSMSNQAVDLGAKTSKSANEVAKGMEELAALGFNAKQTMEAMPGVISAAEASGAEMATTATVMASAINSFGLKASDANHVADLLARSANDSAADIQYMGDALKYAGTPQKH
401953..406611                     PHAGE_Staphy_YMC/09/04/R1988_NC_022758: tail length tape measure protein; SAPIG0386; phage(gi557308069)     0.0                 StaphylococcusaureussubspaureusST398MKKLGIHLSDAKGQFVGMGELIRQFQDNMKGMTREQKLATVATIVGTEAASGFLALIEAGPDKINSYSKSLKNSNGESKKAADLMKDNLKGALEQLGGAFESLAIEVGKDLTPMIRAGAEGLTKLVDGFTHLPGWVRKASVGLAIFGASIGPAVLAGGLLIRAVGSAAKGYASLNRRIAENTILSNTNSKAMKSLGLQTLFLGSTTGKTSKGFKGLAGAMLFNLKPINVLKNSAKLAILPFKLLKNGLGLAAKSLFAVSGGARFAGVALKFLTGPIGATITAITIAYKVFKTAYDRVEWFRNGINGLGETIKFFGGKIIGGAVRKLGEFKNYLGSIGKSFKEKFSKDMKDGYKSLSDDDLLKVGVNKFKGFMQTMGTASKKASDTVKVLGKGVSKETEKALEKYVHYSEENNRIMEKVRLNSGQITEDKAKKLLKIEADLSNNLIAEIEKRNKKELEKTQELIDKYSAFDEQEKQNILTRTKEKNDLRIKKEQELNQKIKELKEKALSDGQISENERKEIEKLENQRRDITVKELSKTEKEQERILVRMQRNRNAYSIDEASKAIKEAEKARKARKKEVDKQYEDDVIAIKNNVNLSKSEKDKLLAIADQRHKDEVRKAKSKKDAVVDVVKKQNKDIDKEMDLSSGRVYKNTEKWWNGLKSWWSNFREDQKKKSDKYAKEQEETARRNRENIKKWFGNAWDGVKSKTGEAFSKMGRNANHFGGEMKKMWSGIKGIPSKLSSSWSSAKSSVGYHTKAIANSTGKWFGKAWQSVKSTTGSIYNQTKQKYSDASDKAWAHSKSIWRGTSKWFSNAYKSAKGWLTDMANKSRSKWDNISSTAWSNAKSVWKGTSKWFGNSYKSLKGWTGDMYSRAHDRFDAISSSAWSNAKSVFNGFRKWLSKTYDWIRDIGKDMGRAAADLGKNVANKAIGGLNSMIGGINKISKAITDKNLIKPIPTLSTGTLAGKGVATDNSGALTQPTFAVLNDRGSGNAPGGGVQEVIHRADGTFHAPQGRDVVVPLGVGDSVINANDTLKLQRMGVLPKFHGGTKKKDWLDQLKGNIGKKAGEFGATAKNTAHNIKKGAEEMVEAAGDKIKDGASWLGDKIGDVWDYVQHPGKLVNKVMSGLNINFGGGANATVKIAKGAYSLLKKKLVDKVKSWFEDFGGGGDGSYLFDHPIWQRFGSYTGGLNFNGGRHYGIDFQMPTGTNIYAVKGGIADKVWTDYGGGNSIQIKTGANEWNWYMHLSKQLVRQGQRIKAGQLIGKSGATGNFVRGAHLHFQLMQGSHPGNDTAKDPEKWLKSLKGSGVRSGSGVNKAASAWAGDIRRAAKRMGVNVTSGDVGNIISLIQHESGGNAGITQSSSLRDINVLQGNPAKGLLQYIPQTFRHYAVRGHNNIYSGYDQLLAFFNNRYWRSQFNPRGGWSPSGPRRYANGGLITKHQLAEVGEGDKQEMVIPLTRRKRAIQLTEQVMRIIGMDGKQNNITVNNDTSTVEKIVETNCYAKDKGNKLTDALIQTVSSQDNNLSSSDAIRGLEKILSKQSGHRANANNYMGGLTN
406611..407435                     PHAGE_Staphy_StauST398_2_NC_021323: phage tail tape measure protein-like protein; SAPIG0387; phage(gi509139928)     0.0                 StaphylococcusaureussubspaureusST398MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
407444..409027                     PHAGE_Staphy_42E_NC_007052: ORF004; SAPIG0388; phage(gi66395512)                     0.0                 StaphylococcusaureussubspaureusST398MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKIPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEICFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIKTTDINYSNDFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
409027..409317                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0389; phage(gi509139930)     8.83e-64            StaphylococcusaureussubspaureusST398MATEEVKIKALLENDKQYFPATHWKAINGVPYAGSSDIDGLPQDGIISVDDKNKLDNLKIGEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
409333..411243                     PHAGE_Staphy_StauST398_2_NC_021323: minor structural protein; SAPIG0390; phage(gi509139931)     0.0                 StaphylococcusaureussubspaureusST398MENLYLIKDLGALAGRDYRAKEIQNLQRIEQFALGLTTEFKLHQKAKTIQHFAEQIYYNGRSQASVNKSLQSQINSLVLAPRNNSANEIVQARVNVNGETFDTLKEHLDDWETKTQINKEETIRELNKAKQQILDIEYRFEPDKQEFLFVTELAPLTNAVMQSFWFDNRTGIVYMTQARNNGYMLSRLRPNGQFIDSSLIVGGGHGTHNGYRYIDDELWIYSFILNGNNENTLVRFKYTPNVEISYGKYGMQDVFTGHPEKPYITPVINEKENKILYRIERPRSQWELENSMNYIEIRSLDDVDKNIDKVLHKISIPMRLTNETQPMQGVTFDEKYLYWYTGDSNPNNRNYLTAFDLETGEEAYQVNADYGGTLDSFPGEFAEAEGLQIYYDKDSGKKALMLGVTVGGDGNRTHRIFMIGQRGILEILHSRGVPFIMSDTGGRVKPLPMRPDKLKNLGMLTEPGLYYLYTDHTVQIDDFPLPREWRDAGWFLEVKPPQTGGDVIQILTRNSYARNMMTFERVLSGRTGDISDWNYVPKNSGKWERVPSFITKMSDINIVGMSFYLTTDDTKRFTDFPTERKGVAGWNLYVEASNTGGFVHRLVRNSVTASAEILLKNYDSKTSSGPWTLHEGRIIS
411243..412709                     PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; SAPIG0391; phage(gi422935802)     0.0                 StaphylococcusaureussubspaureusST398MSNLEKSVAINLENTAHYENISNLDITFRTGESESSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSRRGSGANANRGTINKIIGVRK
412709..413098                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0392; phage(gi509139933)     6.50e-89            StaphylococcusaureussubspaureusST398MQILVNKRNEIISYAIIGGFEEGIDIENLPENFSQVFRPKAFKYSNGEIVFNEDYSEEKDDLHQQIDSEEQNTVASDDILRKMVASMQKQVVQSTKLSMQVNKQNALMAKQIVAFNKKLEEVKGETENA
413091..413255                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0393; phage(gi509139934)     2.59e-31            StaphylococcusaureussubspaureusST398MLKLISPTFEDIKTWYQLKEYTKEDIAWYVDMEVIDKEEYAIITGEKYPENIES
413301..413600                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0394; phage(gi509139935)     4.46e-64            StaphylococcusaureussubspaureusST398MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRAQEKIYDKLDRNFEELKRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLKTIFGI
413736..414038                     PHAGE_Staphy_phi5967PVL_NC_019921: holin; SAPIG0395; phage(gi431810283)              9.53e-68            StaphylococcusaureussubspaureusST398MDAKVITRYIVLILALVNQFLANKGISPIPVDDETISSIILTVVALYTTYKDNPTSQEGKWANQKLKKYKAENKYRKATGQAPIKEVMTPTNMNDTNDLG
414050..415504                     PHAGE_Staphy_tp310_2_NC_009762: amidase; SAPIG0396; phage(gi156604015)               0.0                 StaphylococcusaureussubspaureusST398MLMTKNQAEKWFDNSLGKQFNPDGWYGFQCYDYANMFFMLATGERLQGLYAYNIPFDNKAKIEKYGQIIKNYDSFLPQKLDIVVFPSKYGGGAGHVEIVESANLNTFTSFGQNWNGKGWTNGVAQPGWGPETVTRHVHYYDNPMYFIRLNFPNNLSVGDKAKNVIKQATAKKQAVIKPKKIMLVAGHGYNDPGAVGNGTNERDFIRKYITPNIAKYLRHAGHEVALYGGSSQSQDMYQDTAYGVNVGNKKDYGLYWVKSQGYDIVLEIHLDAAGESSSGGHVIISSQFNADTIDKSIQDVIKNNLGQIRGVTPRNDLLNVNVSAEININYRLSELGFITNKNDMDWIKKNYDLYSKLIAGAIHGKPIGGVVASEVKAPVKNEKNPPVPAGYTLDKNNVPYKKEAGNYTVANVKGNNVRDGYSTNSRITGVLPNNATIKYDGTYCINGYRWITYIANSGQRRYIATGEVDKAGNRISSFGKFSTI
416193..416372                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0397; phage(gi509139938)     6.26e-35            StaphylococcusaureussubspaureusST398MATKSFTTDYKFNNKAAEKLVNAMNKSEDAQFNRSNVFAQRLKTMEDLQNFKNKVKVIL
416394..416921                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0398; phage(gi509139939)     8.31e-127           StaphylococcusaureussubspaureusST398MEWQPNNTYVIAQNLITKYQEITGNSIVGDEMKVHKLMYYIQKTSIALTGNAIIDEQFEGWVHGPVLPSLRGLFDYFVEDNTSRNKVNDTEEFIIENAIYQYGKYATWALREKSHEEISWLNSRKGLSANERGYRNLAIEDIKEDANKIRLYDYSYDMYIDEFEDLDEEEFISAH
416911..417309                     PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG0399; phage(gi509139940)     5.38e-92            StaphylococcusaureussubspaureusST398MHTRSPHDYIGKIVKIRLPYYDVKSAKVAFKSRPGLIIGCEKNQFPCDFTYLPISKISDESKRHSIYDFEVNDETCNLLNLNNVPSFVRCHKVSTVYSKNVHRNYISDLNETNNRLFNEIKSIFDAFATDLF
417414..417426                     attR                                                                                 N/A                 AAAAAGGGCAGAT

#### region 2 ####
475984..475997                     attL                                                                                 N/A                 TATTTGAAAATGAA
481429..482895                     PHAGE_Staphy_42E_NC_007052: ORF012; SAPIG0467; phage(gi66395520)                     1.08e-41            StaphylococcusaureussubspaureusST398MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF
482920..484461                     GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase) (GMP synthetase); SAPIG0468     N/A                 StaphylococcusaureussubspaureusST398MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCECKGQWTMENFIEIEIEKIRQRVGDRRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNIIRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
complement(484555..485691)         PROPHAGE_Oceano_HTE831: integrase; SAPIG0469; phage(gi23097608)                      3.84e-101           StaphylococcusaureussubspaureusST398MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDASTKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWKDIDFTKQTISINKTCARGANYKLIIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYINF
complement(485775..486560)         PHAGE_Strept_phiARI0004_NC_031920: late promoter transcription; SAPIG0470; phage(gi100046)     3.15e-12            StaphylococcusaureussubspaureusST398MAELPTHYGTIIKTLRKYMKLTQSKLSERTGFSQNTISNHENGNRNIGVNEIEIYGKGLGIPSYILHRISDEFKEKGYSPTLNDFAKFDKMYSYVNKAYYNDGDIYYSSYDLYDETIKLLELLKESKINVNDIDYDYVLKLYKQILSTDTEKSIINYETLANTRKSSDKKREVTIEEIGEFHEKYLKLLFTNLETHNDRKKALAEIEKLKEESIYLGEKLRLVPNHHYDAIKGKPMYKLYLYEYPDRLEHQKKIILEKDTN
486677..486904                     PHAGE_Strept_phiARI0031_NC_031910: dsDNA binding protein; SAPIG0471; phage(gi100047)     3.72e-12            StaphylococcusaureussubspaureusST398MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDIDKEVFFI
486950..487210                     bovine pathogenicity island protein Orf18; SAPIG0472                                 N/A                 StaphylococcusaureussubspaureusST398MSQLLSEQASQQLVNSIVDIAEKIALEKVKQSRKRYLIQKEVMEEYNVTHKVITEWEMMGLRKVKIGKTIRYDRQDIENVIEQMKN
487257..487403                     conserved domain protein; SAPIG0473                                                  N/A                 StaphylococcusaureussubspaureusST398MKLNLLYITLTSLLTILLLAISNTYVAFSTYALLITYGFNLTGGLENE
487396..487620                     PHAGE_Staphy_3MRA_NC_028917: superantigen-encoding pathogenicity island protein; SAPIG0474; phage(gi971755515)     1.05e-10            StaphylococcusaureussubspaureusST398MNNEQKEVIQDIYNTLEAVAYNTSMEYIHNCVDGKKEWTENVNREEHLQAIIEWALQQIENNFDFDNDTEVEEL
487621..487920                     PHAGE_Staphy_PT1028_NC_007045: ORF016; SAPIG0475; phage(gi66395180)                  6.16e-49            StaphylococcusaureussubspaureusST398MNWEIKSLFSDLKLLKDSFEDLKDNHGWYFDKLYPHEPNHVLNKTEAIKEGLSYHERRIHNNQMFDLLHLYTKQFDSIIQKFHELEKASSFADQSQDNA
488011..490374                     PHAGE_Lactoc_98201_NC_031064: hypothetical protein; SAPIG0476; phage(gi100015)       4.62e-116           StaphylococcusaureussubspaureusST398MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNYGKVPYSINGYRASTTNKKTWCDFESVSIEYEVDEQYSGIGFVLSDGNNFVCLDIDNAIDEKGQINSELALKMMRLTYCEKSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTVTGCTIGQNDICDNQEVLNTLVDEYFKENLPVNDVVREESNTNMQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSEAVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYTKSIDEFNVIPQGSKDVKQLLNQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEPKHNSNKADEVIYHLTNMVDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTTKISTKYNPNVVRPNLNGWDFDHWLYEIACADKEIVTLLWEVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELISNLVGYKNVASLKVNEFDHEFKLSVLEGKAVVIGDDVPVGINIEDSSNFKSVVTGDSVLVNVKNKQPYRTEFRCTVIQSTNGMPKFTDKTGETNRRLLIVPFNADFNDSNENVDIKEKYLKDNHVLEYVLYKAINLEFDRFTIPQVSKKMLEIYKQDNDSVYDFKIEEFDQWNIQKVPKKVVYYRYRAFCEENGYMGKMSDRTFYRRFEKYLGKEWNTDAKCRYSSIDELEEIVGYINRTLMPFGQQHRSYKNENLKIV
490796..491140                     PHAGE_Staphy_PT1028_NC_007045: ORF013; SAPIG0477; phage(gi66395177)                  2.07e-09            StaphylococcusaureussubspaureusST398MNRNRMKQIILEYIKNNDSTSFVEIENVFEEQGFKYKGNGAYTSGNHKNIIFWMGWNEEAFNIVADLKRDGLIEMQICPPMYYLIDGKGLRLPIVKNKNIKIDHWLPVTFSLVN
491365..491571                     conserved hypothetical protein; SAPIG0478                                            N/A                 StaphylococcusaureussubspaureusST398MLDHTNESVKRVFKYRDKQELLNKYHELLDKYFLHNISFYEEDKNNERIYGLVVHTKNKLGDEDYERV
491558..492616                     PHAGE_Paenib_Harrison_NC_028746: major capsid protein; SAPIG0479; phage(gi971482315)     7.87e-16            StaphylococcusaureussubspaureusST398MKEFKEQFGYQLSNFDDMDIKGYANLYQKDIGKDVSMIEQGLKQLSITETEVLLPEQINKKLLGVLNMNEVNQSSNTWVGTLTKQLVSSENNFNIQELPTARKEVFKELLVNRELPQTLRDVITITDDEHVESIPALSYIKDKLATNGIELSLNGSSKYFDRREGHIYTEVADSVVHGSDRTLDDLLKEIFINECVSYETTLLLDKNNASGLIDKDNQDLSLYNQGIKEVSNTSMYDGIKQAMKDIPQTFRRKVSVVMNTEHHDKLIKELAQMGLGTLAGDLTKLFNVSHVVVTDDAQDIFVGDFGHAIYAKYEPIMYNKKKQALKGVYQFALNYVFDIKIVPELLRIVKVK
492782..493273                     PHAGE_Staphy_PT1028_NC_007045: ORF010; SAPIG0480; phage(gi66395174)                  2.89e-31            StaphylococcusaureussubspaureusST398MVSDFESNDKITEVELLMHYNPKVINSKIKAMRSQIESLYHLNMNHVITNDNDMLVSVSYPLDKLVLYIIEEKDKFEYYMKTAQDRLNLFKDIIKNYSENEQQDVMRYMLSSGKVKNEGVIERLKVDIYKVESRKRQERQNQREELHRIEFNKHLEQVKKELS
493550..493563                     attR                                                                                 N/A                 TATTTGAAAATGAA

#### region 3 ####
1594283..1594296                   attL                                                                                 N/A                 TTTTATTTAATTAT
complement(1596574..1596789)       PHAGE_Staphy_Pvl108_NC_008689: hypothetical protein; SAPIG1488; phage(gi119443711)     1.10e-37            StaphylococcusaureussubspaureusST398MTALPSHYDDMFILNTQAHARLDQMAQQFEVVCNGLNENEGQAIQTMDQSASLIRSNLIQVKEQLEKLAVY
complement(1597005..1597403)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1489; phage(gi509139940)     5.38e-92            StaphylococcusaureussubspaureusST398MHTRSPHDYIGKIVKIRLPYYDVKSAKVAFKSRPGLIIGCEKNQFPCDFTYLPISKISDESKRHSIYDFEVNDETCNLLNLNNVPSFVRCHKVSTVYSKNVHRNYISDLNETNNRLFNEIKSIFDAFATDLF
complement(1597473..1597919)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1490; phage(gi509139939)     5.85e-99            StaphylococcusaureussubspaureusST398MEWQPNNTYVIAQNLITKYQEITGNSIVGDEMKVHKLMYYIQKTSIALTGNAIIDEQFEGWVHGPVLPSLRGLFDYFVEDNTSRNKVNDTEEFIIENAIYQYGKYATWALREKSHEEISWLNSRKGLSANERGYRNLQLRISKKMQTK
complement(1597941..1598120)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1491; phage(gi509139938)     6.26e-35            StaphylococcusaureussubspaureusST398MATKSFTTDYKFNNKAAEKLVNAMNKSEDAQFNRSNVFAQRLKTMEDLQNFKNKVKVIL
complement(1599021..1600466)       PHAGE_Staphy_29_NC_007061: ORF007; SAPIG1492; phage(gi66396198)                      0.0                 StaphylococcusaureussubspaureusST398MQAKLTKKEFIEWLKTSEGKQFNIDLWYGFQCFDYANAGWQVLFGYNLKGVGAKDIPSANNFNGLATVYQNTPDFLAQPGDMVVFGSNYGAGYGHVAWVIEATLDYIIVYEQNWLGGGWTDGIEQPGWGWEKVTRRQHAYDFPMWFIRPNFKSEISPRSVQSPTQAPKKETAKPQPKAVELKIIKDVVKGYDLPKRGGNPKGIVIHNDAGSKGATAEAYRNGLVNAPLSRLEAGIAHSYVSGNTVWQALDESQVGWHTANQVGNKYYYGIEVCQSMGADNATFLKNEQATFQECARLLKKWGLPANRNTIRLHNEFISTSCPHRSSVLHTGFDPITRGLLPEDKRLQLKDYFIKQIRAYMDGKIPVATVSNESSASSNTVKPVASAWKRNKYGTYYMEESARFTNGNQPITVRKVGPFLSCPVGYQFQPGGYCDYTEVMLQNGHVWVGYNWEGQRYYLPIRTWNGSAPPNQILGDLWGEIS
complement(1600447..1600884)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1493; phage(gi509139936)     9.61e-99            StaphylococcusaureussubspaureusST398MDINWKLRFKNKAVLTGLIGALLLFIKQITDLFGFDLSNQLNQASAIIGAILTLLTGIGVITDPTSKGVADSSIAQTYQAPRDSSKEEQQVTWKTSQDASLTPELSTKAPKEYDTSQPFTDASNDVGFDVNEYHYGGGDNASKID
complement(1601020..1601319)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1494; phage(gi509139935)     7.88e-65            StaphylococcusaureussubspaureusST398MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRAQEKIYDKLDRNFEELKRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIAILKTVFGI
complement(1601365..1601529)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1495; phage(gi509139934)     8.64e-31            StaphylococcusaureussubspaureusST398MLKLISPTFEDIKTWYQLKEYTKEDIAWYVDMEVIDKEEYAIITGEKYPENLVS
complement(1601522..1601653)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1496; phage(gi509139933)     1.28e-20            StaphylococcusaureussubspaureusST398MQKQVVQSTKLLMQVNKQNALMAKQIVAFNKKLEEIKGETENA
complement(1601833..1602138)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1497; phage(gi509139935)     4.62e-60            StaphylococcusaureussubspaureusST398MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRAQEKIYDKLDRNFEELKRDKEEDEKNKEKNAKNIRDIKMWILGLIGTILSTFVIALLVVLKKVLI
complement(1602184..1602348)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1498; phage(gi509139934)     2.59e-31            StaphylococcusaureussubspaureusST398MLKLISPTFEDIKTWYQLKEYTKEDIAWYVDMEVIDKEEYAIITGEKYPENIES
complement(1602341..1602730)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1499; phage(gi509139933)     1.02e-79            StaphylococcusaureussubspaureusST398MQILVNKRNEIISYAVIGGFEEGIDIESLPENFSQVFRPKVFKYSDGKIIFNEDYTEEKDDSHQQIDNEENSTGASDDILRKMVASMQKQVVQSTKLLMQVNKQNALMAKQIVAFNKKLEEIKGETENA
1602763..1602774                   attL                                                                                 N/A                 ATGAAATTATCT
complement(1602802..1604268)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; SAPIG1500; phage(gi422935802)     0.0                 StaphylococcusaureussubspaureusST398MSNLEKSVAINLENTAHYENISNLDITFRTGESESSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLPDGDGNGGGVYEFGLTKSSRTSLTISNDVYFDLGSRRGSGANANRGTINKIIGVRK
complement(1604268..1606178)       PHAGE_Staphy_StauST398_2_NC_021323: minor structural protein; SAPIG1501; phage(gi509139931)     0.0                 StaphylococcusaureussubspaureusST398MENLYLIKDLGALAGRDYRAKEIQNLQRIEQFALGLTTEFKLHQKAKTIQHFAEQIYYNGRSQASVNKSLQSQINSLVLAPRNNSANEIVQARVNVNGETFDTLKEHLDDWETKTQINKEETIRELNKAKQQILDIEYRFEPDKQEFLFVTELAPLTNAVMQSFWFDNRTGIVYMTQARNNGYMLSRLRPNGQFIDSSLIVGGGHGTHNGYRYIDDELWIYSFILNGNNENTLVRFKYTPNVEISYGKYGMQDVFTGHPEKPYITPVINEKENKILYRIERPRSQWELENSMNYIEIRSLDDVDKNIDKVLHKISIPMRLTNETQPMQGVTFDEKYLYWYTGDSNPNNRNYLTAFDLETGEEAYQVNADYGGTLDSFPGEFAEAEGLQIYYDKDSGKKALMLGVTVGGDGNRTHRIFMIGQRGILEILHSRGVPFIMSDTGGRVKPLPMRPDKLKNLGMLTEPGLYYLYTDHTVQIDDFPLPREWRDAGWFLEVKPPQTGGDVIQILTRNSYARNMMTFERVLSGRTGDISDWNYVPKNSGKWERVPSFITKMSDINIVGMSFYLTTDDTKRFTDFPTERKGVAGWNLYVEASNTGGFVHRLVRNSVTASAEILLKNYDSKTSSGPWTLHEGRIIS
complement(1606194..1606484)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1502; phage(gi509139930)     8.83e-64            StaphylococcusaureussubspaureusST398MATEEVKIKALLENDKQYFPATHWKAINGVPYAGSSDIDGLPQDGIISVDDKNKLDNLKIGEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
complement(1606484..1608067)       PHAGE_Staphy_42E_NC_007052: ORF004; SAPIG1503; phage(gi66395512)                     0.0                 StaphylococcusaureussubspaureusST398MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKIPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEICFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIKTTDINYSNDFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
complement(1608076..1608900)       PHAGE_Staphy_StauST398_2_NC_021323: phage tail tape measure protein-like protein; SAPIG1504; phage(gi509139928)     0.0                 StaphylococcusaureussubspaureusST398MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDTNRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
complement(1608900..1613558)       PHAGE_Staphy_SMSAP5_NC_019513: phage tail tape measure protein; SAPIG1505; phage(gi422935797)     0.0                 StaphylococcusaureussubspaureusST398MKKLGIHLSDAKGQFVGMGELIRQFQDNMKGMTREQKLATVATIVGTEAASGFLALIEAGPDKINSYSKSLKNSNGESKKAADLMKDNLKGALEQLGGAFESLAIEVGKDLTPMIRAGAEGLTKLVDGFTHLPGWVRKASVGLALFGAAIGPAVLAGGLLIRTVGSAAKGYASLNRRIAENTILSNTNSKAMKSLGLQTLFLGSTTGKTSKGFKGLAGAMMFNLKPINVLKNSAKLAILPFKLLKNGLGLAAKSLFAVSGGARFAGVALKFLTGPIGATITAITIAYKVFKTAYDRVEWFRNGINGLGETIKFFGGKIIGGAVRKLGEFKNYLGSIGKSFKEKFSKDMKDGYKSLSDDDLLKVGVNKFKGFMQTMGTASKKASDTVKVLGKGVSKETEKALEKYVHYSEENNRIMEKVRLNSGQITEDKAKKLLKIEADLSNNLIAEIEKRNKKELEKTQELIDKYSAFDEQEKQNILTRTKEKNDLRIKKEQELNQKIKELKEKALSDGQISENERKEIEKLENQRRDITVKELSKTEKEQERILVRMQRNRNAYSIDEASKAIKEAEKARKARKKEVDKQYEDDVIAIKNNVNLSKSEKDKLLAIADQRHKDEVRKAKSKKDAVVDVVKKQNKDIDKEMDLSSGRVYKNTEKWWNGLKSWWSNFREDQKKKSDKYAKEQEETARRNRENIKKWFGNAWDGVKSKTGEAFSKMGRNANHFGGEMKKMWSGIKGIPSKLSSSWSSAKSSVGYHTKAIANSTGKWFGKAWQSVKSTTGSIYNQTKQKYSDASDKAWAHSKSIWRGTSKWFSNAYKSAKGWLTDMANKSRSKWDNISSTAWSNAKSVWKGTSKWFGNSYKSLKGWTGDMYSRAHDRFDAISSSAWSNAKSVFNGFRKWLSKTYDWIRDIGKDMGRAAADLGKNVANKAIGGLNSMIGGINKISKAITDKNLIKPIPTLSTGTLAGKGVATDNSGALTQPTFAVLNDRGSGNAPGGGVQEVIHRADGTFHAPQGRDVVVPLGVGDSVINANDTLKLQRMGVLPKFHGGTKKKDWLDQLKGNIGKKAGEFGATAKNTAHNIKKGAEEMVEAAGDKIKDGASWLGDKIGDVWDYVQHPGKLVNKVMSGLNINFGGGANATVKIAKGAYSLLKKKLVDKVKSWFEDFGGGGDGSYLFDHPIWQRFGSYTGGLNFNGGRHYGIDFQMPTGTNIYAVKGGIADKVWTDYGGGNSIQIKTGANEWNWYMHLSKQLVRQGQRIKAGQLIGKSGATGNFVRGAHLHFQLMQGSHPGNDTAKDPEKWLKSLKGSGVRSGSGVNKAASAWAGDIRRAAKRMGVNVTSGDVGNIISLIQHESGGNAGITQSSSLRDINVLQGNPAKGLLQYIPQTFRHYAVRGHNNIYSGYDQLLAFFNNRYWRSQFNPRGGWSPSGPRRYANGGLITKHQLAEVGEGDKQEMVIPLTRRKRAIQLTEQVMRIIGMDGKQNNITVNNDTSTVEKIVETNCYAKDKGNKLTDALIQTVSSQDNNLSSSDAIRGLEKILSKQSGHRANANNYMGGLTN
complement(1613693..1615099)       PHAGE_Staphy_StauST398_2_NC_021323: tail length tape measure protein; SAPIG1506; phage(gi509139927)     0.0                 StaphylococcusaureussubspaureusST398MNEKVEGMTLELKLDHLGVQEGMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELKQVNANYQKAKSSVKDVEKAYLKLVEANKKEKLSLDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQKLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAALNNLERSIDKASSEMKTFNKEQMIAQSHFGKLASQADVMSKKFSSIGDKMTSLGRTMTMGVSTPITLGLGAALKTSADFEGQMSRVGAIAQASSKDLKSMSNQAVDLGAKTSKSANEVAKGMEELAALGFNAKQTMEAMPGVISAAEASGAEMATTATVMASAINSFGLKASDANHVADLLARSANDSAADIQYMGDALKYAGTPQKH
complement(1615113..1615271)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1507; phage(gi509139926)     5.25e-30            StaphylococcusaureussubspaureusST398MEQYGWTLTEVRKQPYVKLLEILNEENKEETEEKQSEQKVITGTDLRKLFGS
complement(1615313..1615663)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1508; phage(gi509139925)     8.38e-78            StaphylococcusaureussubspaureusST398MIKFEIKDRKTGKTESYTKEDVTMGEAEKCYEYLELVNQENKKEAPNATKMRQKERQLLVDLFKDEGLTEEDVLNKMSTKTYTKALQDIFREINGEDEEDSETEPEEMGKTEEQSQ
complement(1615721..1616176)       PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; SAPIG1509; phage(gi509139924)     2.24e-102           StaphylococcusaureussubspaureusST398MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKVDVPQFKTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKTLKYTSEHPEFVTVDERTGAIHGVAEGTSVITATSTDGSDKSGQITVTVTNG
complement(1616268..1616909)       PHAGE_Staphy_StauST398_2_NC_021323: major tail protein; SAPIG1510; phage(gi509139922)     1.13e-153           StaphylococcusaureussubspaureusST398MAEGQGSYKVGFKRLYVGVFNPEATKVVKRMTWEDEKGGTVDLNITGLAPDLVDMFASNKRVWMKKQGTNEVKSDMSIFNIPSEDLNTVIGRTKDKNGTSWVGENTRAPYVTVIGESEDGLTGQPVYVALLKGTFSLDSIEFKTRGEKAEAPEPTKLTGDWMNRKVDVDGTPQGIVYGYHEGKEGEAEFFKKVFVGYTDSEDHSEDSAGSLPS
complement(1616944..1617339)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1511; phage(gi509139921)     4.20e-91            StaphylococcusaureussubspaureusST398MNILNTVKGILLSDAELKTHINSRIYYYKVTENAETSKPFVVITPVYDLPSDFMSDKYLSEEYLIQIDVESSNHQKTIDITKRIRYLLYQQNLIQASSQLDAYFEETKRYVMSRRYQGIPKNIYYKNQRIE
complement(1617340..1617741)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1512; phage(gi509139920)     6.11e-92            StaphylococcusaureussubspaureusST398MSVEIKGIPEVLKKLESVYGKQAMQAKSDRALNEASEFFIKALKKEFESFKDTGASIEEMTKSKPYTKVGSQERAVLIEWVGPMNRKNIIHLNEHGYTRDGKKYTPRGFGVIAKTLAASERKYREIIKKGLAR
complement(1617738..1618070)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1513; phage(gi509139919)     2.15e-76            StaphylococcusaureussubspaureusST398MEFNEFKDRAYFFQYVNKGPYPDEEEKMKLYSCFCKIYNPSMKDREILKATESKSGLTIIVRSSKTEYLPQTNHLVKIDRGSYSDKLFNIEEIRIDTPDIGYNTVVLSEK
complement(1618082..1618360)       PHAGE_Staphy_StauST398_2_NC_021323: putative DNA packaging protein; SAPIG1514; phage(gi509139918)     4.09e-61            StaphylococcusaureussubspaureusST398MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIARDYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
complement(1618429..1619592)       PHAGE_Staphy_StauST398_2_NC_021323: putative capsid protein; SAPIG1515; phage(gi509139917)     0.0                 StaphylococcusaureussubspaureusST398MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVETAKELKLKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVSPKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGSLPS
complement(1619604..1620377)       PHAGE_Staphy_phi2958PVL_NC_011344: prohead protease; SAPIG1516; phage(gi209363589)     0.0                 StaphylococcusaureussubspaureusST398MSMKAKYFQMKRKSKSKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEILGANEIAASISKEQYKRFENVPEDLKKDVDKITKIDDVDTSELVETPKESMSLEEKEKREKIKRECEILKMTMSY
complement(1620361..1621599)       PHAGE_Staphy_phi7401PVL_NC_020199: portal protein; SAPIG1517; phage(gi448244665)     0.0                 StaphylococcusaureussubspaureusST398MNVIAKENIVTRIKKKLIDNWIDQSASKLYDFSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES
complement(1621604..1623295)       PHAGE_Staphy_phi7401PVL_NC_020199: terminase large subunit; SAPIG1518; phage(gi448244664)     0.0                 StaphylococcusaureussubspaureusST398MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVRKECDRHLRYLENGGKWVFDEELAHRPIRFIEKFCKPSKGSKRQLVLQPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMIKASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAGYQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFITKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLTHSWIPKHKVEYSNEKIPYREWEEDGLLTVQDKPYIDYQDVFDWIIKMNAHYPVEKVTYDRANAFKLNQELKNYGFETEETRQGALTLSPALKDLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDSGEGNIEFISIKDIMR
complement(1623285..1623590)       PHAGE_Staphy_StauST398_2_NC_021323: terminase small subunit; SAPIG1519; phage(gi509139913)     4.64e-68            StaphylococcusaureussubspaureusST398MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVKNPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
complement(1623718..1624032)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1520; phage(gi509139912)     4.07e-70            StaphylococcusaureussubspaureusST398MTKHNNIYKHGRKSYQYDWFYHSKAWKKLREIALDRDNYLCQMCLREDIVTDANIVHHIIYVDEDFNKALDLDNLMSVCYSCHNKIHANDNDKSNIKRIRVLKI
complement(1624094..1624627)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1521; phage(gi509139911)     2.14e-97            StaphylococcusaureussubspaureusST398MGNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHECHMHRNTVTTIRKNFVKAVSVSCRYQITLCKDCAKGLQICSNMIVSERCIKLSKSYTT
complement(1624640..1625998)       PHAGE_Staphy_StauST398_2_NC_021323: phage helicase; SAPIG1522; phage(gi509139910)     0.0                 StaphylococcusaureussubspaureusST398MAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTPSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRVDTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK
complement(1625988..1626278)       PHAGE_Staphy_vB_SauS_phi2_NC_028862: vrr-nuc domain protein; SAPIG1523; phage(gi971750190)     1.03e-66            StaphylococcusaureussubspaureusST398MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTFGD
1626473..1626595                   PHAGE_Staphy_47_NC_007054: ORF143; SAPIG1524; phage(gi66395725)                      6.93e-20            StaphylococcusaureussubspaureusST398MLYHLLHQCCITKNDATPTITFYTHVLHHSKNDATSDTTL
complement(1626619..1629066)       PHAGE_Staphy_phi7401PVL_NC_020199: virulence-associated protein E; SAPIG1525; phage(gi448244658)     0.0                 StaphylococcusaureussubspaureusST398MLDKVTQIETIKYDRDVSYSYAASRLSTHWTNHNMAWSDFMQKLAQTVRTKEDLTEYNKMSKSEQADIKDVGGFVGGYLKEGKRRAGQVMNRSMLTLDIDYAAQDMTDILSMFYDFAYCLYSTHKHREISPRLRLVIPLKRNVNADEYEAIGRKVADIVGMDYFDDTTYQPHRLMYWPSTSNDAEFFFTYEDLPLLDPDKILNEYVDWTDTLEWPTSSREESKTKRLADKQGDPEEKPGIVGAFCRAYTIEEAIETFIPDLYEKHSTNRYTYHEGSTAGGLVLYENNKFAYSYHNTDPVSGMLVNSFDLVRIHLYGAQDEDAKTDTPVNRLPSYKAMQQRAQNDEVVKKQLINDKMSDAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIECLGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYDIHHSGKTKDAIISVAMQNAYHPVRDYLNKISWDGHKRLEKLFIKYLGVEDTEVNRTTTKKALTAGIARVMEPGCKFDYMLTLYGPQGVGKSALLKKLGGAWFSDSLVSVTGKEAYEALQGVWLMEMAELAATRKAEVEAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERVEVNWSKLTKEEIDQIWAEAKHYYEQGEELFLNPELEEEMRSIQNKHTEESPYTGIIDEYLNTPIPSNWEDLTIFERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGSMEIRKISNILRQLDNWSVYDGNKSGKIRFGKDYGVQIAYVRDESLEDLM
complement(1629354..1629554)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: hypothetical protein; SAPIG1526; phage(gi557308112)     4.42e-40            StaphylococcusaureussubspaureusST398MWIVISIVLAIFLLVLLSSISHKMKTIEALEYMNSYLFKQLVKNNGVEGLEDYENEVERIRKRFKS
complement(1629622..1629774)       PHAGE_Staphy_YMC/09/04/R1988_NC_022758: integrase regulator RinB; SAPIG1527; phage(gi557308111)     2.16e-29            StaphylococcusaureussubspaureusST398MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDFEKIRAEVSW
complement(1629771..1630157)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1528; phage(gi509139904)     2.39e-87            StaphylococcusaureussubspaureusST398MIKKLKNMDWFDIFIAGILRLFGVIALMLVVISPIYTVASYQNKEVHQGTITDKYNKRQDKEDKFYIVLDNKQVIENSDLLFKKKFDSADIQARLKVGDKVEVKTIGYRIHFLNLYPVLYEVKKVDKQ
complement(1630154..1630360)       PHAGE_Staphy_3MRA_NC_028917: hypothetical protein; SAPIG1529; phage(gi971755489)     3.86e-43            StaphylococcusaureussubspaureusST398MTQYLVTTFKDSTGRKHTHITKAKSNQRFTVVEAESKEEAKEKYEKQVKRDAVIKVGQLFENIRECGK
complement(1630397..1630933)       PHAGE_Staphy_B166_NC_028859: dUTPase; SAPIG1530; phage(gi971749902)                  8.48e-129           StaphylococcusaureussubspaureusST398MTNTLTIDQLQELLQIQKEFDDRIPTRNLNDTVASMIIEFVEWINTLEFFKNWKKQPGKPLDTQLDEIADYLAFSLQLTLTIVDEEDLEETTEVMVDLIENEVTLPKLHSVYFVHVMHTLTEQFVKGIDNSIVQVLIMPFLYANTYYSIDQLIDAYKKKMKRNHERQDGTADAGKGYV
complement(1630926..1631174)       PHAGE_Staphy_Slt_NC_002661: phi PVL ORF 52 analogue; SAPIG1531; phage(gi12719419)     3.64e-50            StaphylococcusaureussubspaureusST398MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGLPNAMQDALKEDIYLDEAIGIMVSQVIYEYEEEQEND
complement(1631167..1631532)       PHAGE_Staphy_SA97_NC_029010: hypothetical protein; SAPIG1532; phage(gi971765342)     4.83e-71            StaphylococcusaureussubspaureusST398MNYETGFQLGVMDARLKKMRKQRDEYKKQRDELIVDIAKLRERNEELENMWRTVKNELLGRYEFYRFRLNELQIESRANKAVAINMGAKINASAILYRMDKLDGTNEFYEFLGQMEDDTNE
complement(1631529..1631966)       PHAGE_Staphy_SMSAP5_NC_019513: hypothetical protein; SAPIG1533; phage(gi422935828)     7.11e-12            StaphylococcusaureussubspaureusST398MMPKYRVWDTETKKMCEVVALDLHNSEVSYSTKENEYGKVIKEFIKTEKMADVELMQSIGINLWGRELYEGDILKVVSTKLWGIERDKTYIYLDATGVVTRNAIGTIIGDVHLLRVFEAEEVREMPTIEYLGNKFENPELLEVPE
complement(1631963..1632154)       PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; SAPIG1534; phage(gi100148)       4.42e-36            StaphylococcusaureussubspaureusST398MQTYKVSLCIKFLASKCDYKIKKHYFVQSINEEEAKNMALKLTRKKLPFKTASIEVEKVEVVE
complement(1632154..1632561)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1535; phage(gi509139902)     2.16e-57            StaphylococcusaureussubspaureusST398MKIKVKKEMRLDELIKWAWDNPGLATGRNFYPQTKSDIDYKCFSLYDGRNCIIKGFVSADDTFEVEFEEDITEETKVDRLIELFEIQEGDYNSTLYENTSIKECLYGRCVPTKAFYILNDDMTMTLIWKDGELVE
complement(1632564..1632770)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1536; phage(gi509139901)     5.37e-45            StaphylococcusaureussubspaureusST398MKIKIEKEMNLPELIQWAWDNPKLSGNKRFYSNDVERNCFVTFHVDSILCNVTGYVSINDKFTVQEEI
complement(1632784..1633026)       PHAGE_Staphy_PVL_NC_002321: hypothetical protein; SAPIG1537; phage(gi9635215)        6.36e-52            StaphylococcusaureussubspaureusST398MTDSARKEYLSRFFGSKRYLYQDNERVAHIHVVNDTYYFHGHIVPGWQGVKKTFDTAEELETYIKQHDLEYEEQKQLTLF
complement(1633032..1633286)       PHAGE_Staphy_53_NC_007049: ORF061; SAPIG1538; phage(gi66395418)                      1.80e-57            StaphylococcusaureussubspaureusST398MSIISNRKVDMNETQDNVKQPAHYTYGDIEIIDFIEQVTAQYPPQLAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVDRVFDLWE
complement(1633286..1633687)       PHAGE_Staphy_StauST398_2_NC_021323: putative DNA-binding protein; SAPIG1539; phage(gi509139898)     1.15e-92            StaphylococcusaureussubspaureusST398MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAILNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA
complement(1633884..1635845)       PHAGE_Staphy_StauST398_2_NC_021323: DNA polymerase; SAPIG1540; phage(gi509139896)     0.0                 StaphylococcusaureussubspaureusST398MKFMNIDIETYSSNDISKCGAYKYTEAEDFEILIIAYSIDGGPISAIDMTKVDNEPFHADYETFKIALFDPAVKKYAFNANFERTCLAKHFNKQMPPEEWICTMVNSMRIGLPASLDKVGEVLRLQNQKDKAGKNLIRYFSIPCKPTKVNGGRTRNLPEHDLEKWQQFIDYCIRDVEVEMAIANKIKDFPVTAIEQTYWVFDQHINDRGIKLSKSLMLGANVLDKQSKEELLKQAKHITGLENPNSPTQLLAWLKDEQGLDIPNLQKKTVQDYLKESTGKAKKMLEIRLQMSKTSVKKYNKMHDMMCSDERVRGLFQFYGAGTGRWAGRGVQLQNLTKHYISDTELEIARDLIKEQRFDDLDLLLNVHPQDLLSQLVRTTFTAEEGNELAVSDFSAIEARVIAWYAKEQWRLDVFNTHGKIYEASASQMFNVPVESITKGDPLRQKGKVSELALGYQGGAGALKAMGALEMGIEENELQGLVDSWRNANPNIVNFWKACQEAAINTVKSRKTHHTHGLRFYMKKGFLMIELPSGRALAYPKASVGENSWGSQVVEFMGLDLNRKWSKLKTYGGKLVENIVQATARDLLAISIARLEASGFKIVGHVHDEVIVEIPRGSNGLKEIETIMNKPVDWAKGLNLNSDGFTSPFYMKD
complement(1635905..1636462)       PHAGE_Staphy_phi7401PVL_NC_020199: hypothetical protein; SAPIG1541; phage(gi448244654)     1.46e-132           StaphylococcusaureussubspaureusST398MKAKVLNKTKVITGKVRASYAHIFEPHSMQEGQEAKYSISLIIPKSDTSTIKAIEQAIEAAKEEGKVSKFGGKVPANLKLPLRDGDTEREDDVNYQDAYFINASSKQAPGIIDQNKIRLTDSGTIVSGDYIRASINLFPFNTNGNKGIAVGLNNIQLVEKGEPLGGASAAEDDFDELDTDDEDFL
complement(1636488..1637654)       PHAGE_Staphy_47_NC_007054: ORF012; SAPIG1542; phage(gi66395668)                      0.0                 StaphylococcusaureussubspaureusST398MKLDHSNRAHAKLSASGAKQWLNCPPSIKASEGIADKSSVFAEEGTFAHELSELYFSLKYEGLTQFEFNKAFQNYKRNQYYSEELREYVEEYVANVEEKYNEALSRDDDVIALFETKLDLGKYVPESFGTGDVIIFSGGVLEIIDLKYGKGIEVSAIDNPQLRLYGLGAYELLSLIYDIHTVRMTIIQPRIDNFSTEELPISRLLQWGTDFVKPLARLAYNGEGEFKAGSHCRFCKIKHSCRTRAEYMQNVPQKPPHLLSDEEIAELLYKLPDIKKWADEVEKYALEQAKENDKTYPGWKLVTGRSRRVITDTKAVRDRLVEAGYKPEDITETKLLSITNLEKLIGKKAFSKIAEGFIEKPQGKLTLATESDKRPAIKQSAEDDFDKL
complement(1637651..1638013)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1543; phage(gi509139893)     2.02e-79            StaphylococcusaureussubspaureusST398MAILEDIFEELKLLNKNLRVLNTELSTVDSSIVQEKVKEAPMPKEETAQLETIEEVKETSTDLTKDYILSVGKEFLKKADTSDKKEFRNKLNELGADKLSTIKEEHYEKIVDFMEARINA
complement(1638028..1638351)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1544; phage(gi509139892)     9.94e-74            StaphylococcusaureussubspaureusST398MTLQQKILSHFATYDNFNPDDVVEVFGVSKTHAKSTLSRLKKKGKVEMESWGKWRVIEAQLHLTVVERKKEILEEQFELLARLNEQSDDPREIEDRIKLMIRLANQF
complement(1638604..1638867)       PHAGE_Staphy_47_NC_007054: ORF047; SAPIG1545; phage(gi66395701)                      9.49e-58            StaphylococcusaureussubspaureusST398MPKIIIPPTPENTYRGEEKFVKKLYAKPTEIHQLFGVCRSTVYNWLKYYREDNLGVENLYIDYSATGTLINISKLEEYLIRKHKKWY
complement(1638960..1639106)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1546; phage(gi509139889)     1.43e-23            StaphylococcusaureussubspaureusST398MNTRSEGLRIGVPQVSSKADASSSYLTEKERNLGAEILELIKKVITAT
1639161..1639526                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1547; phage(gi509139888)     8.47e-83            StaphylococcusaureussubspaureusST398MPLISDEFDTLTKDQQYILSVLYKDYLECVKLGSVKLTCNNFGSAKDIHTKYFQKLHFEDVKYDLNKLKNSGFLNGVYASNTIYHVTISDKTVVYFENEFKNNLKSIIDSISKIASIIPGL
1639796..1640005                   PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1549; phage(gi509139887)     1.29e-42            StaphylococcusaureussubspaureusST398MKACLYLSNDKFVEIDNLEKVIKSGHRGTVEISKEKIKSSLFTNGSYTFVGDKIVAIASAKIEFIEFID
complement(1639995..1640138)       PHAGE_Staphy_StauST398_2_NC_021323: hypothetical protein; SAPIG1548; phage(gi509139886)     2.00e-24            StaphylococcusaureussubspaureusST398MLQKFRIAKEKSKLKLNLLKHANSNLETRNNPELLRAVAELLKEINR
complement(1640153..1640596)       PHAGE_Staphy_phiPV83_NC_002486: hypothetical protein; SAPIG1550; phage(gi9635684)     9.78e-103           StaphylococcusaureussubspaureusST398MEQITLTKEELKEIIAKEVRNAIKGEKPISSGAIFSKVRINNDDLEEINKKLNFAKDLSLGRLRKLNHPIPLKKYQHGFESIHQKAYVQDVHDHIRKLTLSIFGVTLNSDLSESEYNLAAKVYREIKNYYLYIYEKRVSELTIDDFE
complement(1640644..1640856)       PHAGE_Staphy_tp310_2_NC_009762: hypothetical protein; SAPIG1551; phage(gi156603955)     3.32e-44            StaphylococcusaureussubspaureusST398MTTSVADKPYLKIKSLIALKGTNQKEVAKAIGMSRSLLSIKINRINGRDFTTSEAKKLADHLNVKVDDFF
1640977..1640988                   attR                                                                                 N/A                 ATGAAATTATCT
1641008..1641739                   PHAGE_Staphy_tp310_2_NC_009762: repressor; SAPIG1552; phage(gi156603954)             4.40e-165           StaphylococcusaureussubspaureusST398MGIGEGLKKLRKNKNMTMEQLATDLNNKYPDLMKLTKGKISKWENEKEEPRLSTAKILAEYFNVKINDLYSESNTTYKDDNDITSLYNKLTPPRQENVLNYANEQLEEQNKVTSIDGYKESKLVSYIACGATGAGIGEELYDDILHEEVFFKEDETPSNADFCILVNGDSMEPMLKQGTYAFIKKEDSIKDGTIALVVLDGVSLIKRVDICEDYINLVSLNPKYDDIKVASFSNIKVMGKVVL
1641810..1641992                   PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; SAPIG1553; phage(gi209363556)     1.11e-37            StaphylococcusaureussubspaureusST398MKITNCKIKKETIVYEVLTSGNQPFTYELPKDLSSHNARKYLEFISQKIDGDKLTKEDSL
1641989..1643185                   PHAGE_Staphy_StauST398_2_NC_021323: integrase; SAPIG1554; phage(gi509139879)         0.0                 StaphylococcusaureussubspaureusST398MTLLNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWLEYHIKTSGSKLTTLNNIKIRIRNIKRYSSENLLLNKLDTKYMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIEKDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKDIDLLNKTINITGTIHRIKYEEGFGYKDTTKTISSKRSISINSRTVEIFKKIILENKMLKRWNSSYVDRGFIFTTKKGNPLCNNQITGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENIPS
complement(1643228..1645255)       PHAGE_Staphy_phi2958PVL_NC_011344: hypothetical protein; SAPIG1555; phage(gi209363553)     4.66e-141           StaphylococcusaureussubspaureusST398MNKINDRDLTELSSYWVYQNIDIKKEFKVNGKRFKQVDSYNDDKNSNLNGAADIKIYELLDDKSKPTGQQTIIYQGTSNEAINPNNPLKSSGFGDDWLQNAKLMNNDNESTDYLKQTDQLSNQYKKKLEDADRLSNSDFLKKYRMESSNFKNKTIVADGGNSEGGAGAKYQGAKHPNEKVVATDPAMVPYAAWQKFARPRFDNMISFNSTNDLLTWLQDPFIKDMPGKRVNISDGVPRLDALIDSHVGYKRKLNRKDNTYDTVPLIKIKSVKDTEIKNGKKVKKTINITLDMDGRIPINVWTGDSIARSGRGTLIKLNLENLDALSKLITGETSGMLAECVIFLNESFNISENENKNFADRKKQLSEGFKDKINLFQLEEMERTLISKINSLEEVADETIESISAVKHLLPDFALDALKERINELFKGIKSFIEKVYDSIDNEILEIFKNIDHDFKDGVSEEMMKHLKVVKQNIQQIKNQNDIYGRQIADIRSIMKQQDATILDGNYQINYSCENMVQGLALPSNYLGRKMKILKDHIDDGIKKIADYVQGIYDEYASKIVDVIKYLINTIPKIRKNLRHAIEMLNVKKKEFLSLIPNVTCNYIKTKLEELDNTLGKWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQMIFEPSHYDDMFISRKALTPVFSSVL
complement(1645248..1646177)       lipoprotein, putative; SAPIG1556                                                     N/A                 StaphylococcusaureussubspaureusST398MKKFIGSVLATTLILGGCSTMENESSKDTNTETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNASLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFFKENEKKYQYTGFTKEAINKTQNVGYKNEYFYITYSSRSLKEYRKYYEPLIRKNDKEFKEGMERARKEVNYAANTDAVATLFSTKKNFTKDNTVDDVIELSDKLYNLKNKPDKSTITIQIGKPTINTKKAFYDDNRPIEYGVHSKDE
complement(1646422..1648116)       sensor protein SrrB (Staphylococcal respiratory responseprotein B); SAPIG1557        N/A                 StaphylococcusaureussubspaureusST398MTTVLILLSIALITFMQYYFTQETENAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSSASLSNIKKQMLNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNELLNVARMDAEGLSVNKEIQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
complement(1648154..1648879)       PHAGE_Roseob_1_NC_015466: transcriptional regulator CtrA; SAPIG1558; phage(gi331028091)     9.55e-06            StaphylococcusaureussubspaureusST398MSNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAMENNYACILLDLMLPEMDGIQVATKLREHKQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVNLTPKEYELLIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWGVGYKFEVKSNDEPAK
1649002..1649015                   attR                                                                                 N/A                 TTTTATTTAATTAT
