gi|00000000|ref|AP010804.1|  Sphingobium japonicum UT26S DNA, chromosome 2, complete genome. 681892, gc%: 65.94%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
535712..535724                     attL                                                                                 N/A                 CTGCGCCGGCGCG
543229..543240                     attL                                                                                 N/A                 GAGCGGTGGCAG
complement(549781..550578)         PROPHAGE_Xantho_33913: IS1480 transposase; SJA_C2-04650; phage(gi21231089)           5.17e-28            SphingobiumjaponicumUT26SMAQIAKKTKRYPSDLTDEEWDRLAPLMPKPGRRGRPREVDFREVINAVRYLVRSGCGWRMLPIHFGAWQTVYGWFRELARRFLFQTIHDIELMLDRERQGREASPSAAVIDSQSVKAPSAEKRGFDAGKKVVGRKRHIAVDTDGRLLMVNLTTADISDSAGAQTILDGIRKRWPWIKHLFADGAYDRLKLMDKASYLDFVIEVIRRSDQQQGFKVLPRRWVVERTFGWMIRWRRLVRDYEKRIDVSQAMILVAMGGNLLRRNAHP
550765..550995                     hypothetical protein; SJA_C2-04660                                                   N/A                 SphingobiumjaponicumUT26SMFESGVFGQGNAFWRWIATVEARPYLAAFAADRAPPSEREFFAVDLAAEDLLDSDHLAELAQQIEATHGGRHTRQG
complement(551285..551542)         PHAGE_Pseudo_PAJU2_NC_011373: putative repressor cI; SJA_C2-04670; phage(gi209552478)     1.51e-06            SphingobiumjaponicumUT26SMPTIYLKRTSPLMTQLGANIARELKKLGITQGELSERSGVAASHISYMVRGQGNPTLDTLESLAGVFRLSVVELLAEDSISDDQS
551698..552432                     ECF-type sigma factor; SJA_C2-04680                                                  N/A                 SphingobiumjaponicumUT26SMDGQDDAMKSAMELFAARLAKRDVERPITDHRTVERLIAMLEPHEQQVVRLRIGLGPSPALTLAATAKIVGVSPSRIGQIEDKAFRRIRWVCNNIDIHDRSALDALIARRRDEAAEAERIRKRDALQKALDQERKRKAKQDRDEVRRAKARDSAWNRKLRVAQAELDRMRSDAQFFAEQIAQIEQRANWLRAILPRDRQLAALREQADEIRDAIASAEASISNMLASPPDGPQLGKEASTNDGH
552422..553120                     PHAGE_Entero_phi80_NC_021190: DNA invertase, resolvase, site-specific recombinase Pin; SJA_C2-04690; phage(gi824479608)     3.04e-11            SphingobiumjaponicumUT26SMATDIEPSPAFAPQIGRVYLRVSTDAQDLRRQDAIVAEAKAAGYYVAAVYREKASGARADRPELLRMIADLQPGEVVIAEKIDRISRLPLAEAEQLVETIRARGARLAIPGVVDLSDLAADAEGIARIVLESVQAMLLKIALQMAHDDYTDRRERQRQGIALAKAAGRSGGRKGDRATHARIVALREAGKSIAKTAELADCDRSTVKRVWAAHRAAQVQEPSPQRNHRERNR
553514..553828                     PHAGE_Xantho_CP2_NC_020205: hypothetical protein; SJA_C2-04700; phage(gi448245205)     4.25e-09            SphingobiumjaponicumUT26SMQNIAEFRIIGRVGSVDTTDKVTHVSVAANYNRKDGDEWKTDTHWNRVTFFRQLAERAADLGKGDLVHITGRVRQNSYESNGETRYSVDLIAEGLGILVRGGAD
554254..554544                     hypothetical protein; SJA_C2-04710                                                   N/A                 SphingobiumjaponicumUT26SMLWASLALWLAIAATALIVVLAVGLAAYFAFGWLGVGAVAVFVLIVFFGKDPPTEQTGPRRKGKGLNLNDDPNPWYMQSQYRFGSGNSAAHNRWHK
554590..555333                     PHAGE_Salmon_ST160_NC_014900: regulatory protein; SJA_C2-04720; phage(gi318065923)     2.50e-07            SphingobiumjaponicumUT26SMTNERGGIGKTTLTCHIAWHLAEQGKRVVVLDLDKQCHSAGMLKAEFEQIGPVQSILDFDPNEEPPALACFKNTRQIVELTTDSPQQGQHIGAYVRAIRAGLAKHYDYCVIDTAPAWDGRNLMALIASDYVAVPLDPDKTARQSLNEISQSISLANKVRGEGNATRFGIVFNRVQTTSEVSKMLMDRIGQALPANVVPHTIPHREHMREAALLEIPVWRLAKDTRRSAPIVREVVSYIVDQAEREAA
555330..556355                     PHAGE_Staphy_EW_NC_007056: ORF013; SJA_C2-04730; phage(gi66395820)                   3.24e-08            SphingobiumjaponicumUT26SMSKAAVKPAKKSFADFDMDAMDFSAVPANTEFKAAGRFQRLPLDDIDPDPTQVRREFDQAEIDALAATIKDRGLLQPIVVAPTSNGRYIIRYGERRYRACRQLGFDQIDTVLDQADAERDIGLDQFLENEQRQALSLAERVSFIASRVSDTLSTKDLAARIAKPHSEVKRLYSLRTLPEDILAALKNCSPRAAVAIKHAIELDEQATRNFVAANENPTAAACEQFLATLQGSPEEETAQAGAAKAIDDPASPQESRALVAAATSATDDRRERPELDAHDDEREGDGAVLADPSDHKPRAPRQPKEATDAPAIIIQGRRGIVLSGQVTVRFDGEAAPQTFDF
556405..556416                     attR                                                                                 N/A                 GAGCGGTGGCAG
556546..557097                     hypothetical protein; SJA_C2-04740                                                   N/A                 SphingobiumjaponicumUT26SMEKTLGFKIEATKLAKIDALAQTRGGRGPFMRQLVDAVLRQSGAASEAAPLVDREAAGEHRLYLRPTETELAVIRHRAKERRMTPATWAMALVRRHIGIAAPVDRELREELLNCRQALQRIGRNVNQIARAANKMALADNAAEIAGELQKVNDLRAAIGAAVEGIGAATKADLSYWEVSSERL
557231..557245                     attL                                                                                 N/A                 GGGCTCTGTTGCAAA
complement(557286..558050)         PROPHAGE_Brucel_1330: transposase, putative; SJA_C2-04750; phage(gi23502708)         1.09e-56            SphingobiumjaponicumUT26SMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQRYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDQETAHRQVKYLNNVIEADHGKLKMLIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMDMLNHHFAAAA
complement(558090..558650)         type IV secretory pathway VirD2 component; SJA_C2-04760                              N/A                 SphingobiumjaponicumUT26SMVKVTGRPKGKNHAAAHFDYIGRKGDVPLETRDGDILTDKEARAELARDWGDPVYWRDNSTVAAVSMVFSMPAGTDPDKVLSAVREVARSEIGHEWDYVLALHTDTPRPHVHVTVAARGDTGQRFNPRPQTLHHYRERFAEELRARGVTAEATPRAARGVGRAGQSMALNRMRQRYMAGTALLQKS
558696..558710                     attR                                                                                 N/A                 GGGCTCTGTTGCAAA
558758..559522                     PROPHAGE_Brucel_1330: transposase, putative; SJA_C2-04770; phage(gi23502708)         1.09e-56            SphingobiumjaponicumUT26SMTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQRYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDQETAHRQVKYLNNVIEADHGKLKMLIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMDMLNHHFAAAA
569897..569909                     attR                                                                                 N/A                 CTGCGCCGGCGCG
